Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I1 R1
|
1696 |
279.3 |
15874187 |
97.8% |
15524954 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
1,992,261 |
T→C |
S157G (AGT→GGT) |
b1913 ← |
excinuclease ABC subunit C |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 1,992,261 | 0 | T | C | 100.0%
| 683.7
/ NA
| 216 | S157G (AGT→GGT) | b1913 | excinuclease ABC subunit C |
| Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (114/102); total (114/102) |
Only 100 of 223 total aligned reads displayed.
CTTCTTCACTCACCAGTCCTTCAACGCACGGTCCCAGACAGCGCCCTATCTGGTATTGCAGACACGGACGCGAGCGATTGCGATAAACACTATTTTCGCACTGGCGAATGGGGAAAATCTTTTGCAGTAGCGCCAGTGTTTCACGTACGGCATAGCCATTCGGGAACGGGCCGAAATATT > NC_000913/1992171‑1992350
|
cttcttcACTCACCAGTCCTTCAACGCACGGTCCCAGACAGCGCCCTATCTGGTATTGCAGACACGGACGCGAGCGATTGCGATAAACACCAt < 1:6673443/93‑1 (MQ=255)
cttcttcACTCACCAGTCCTTCAACGCACGGTCCCAGACAGCGCCCTATCTGGTATTGCAGACACGGACGCGAGCGATTGCGATAAACACCAt > 1:7857978/1‑93 (MQ=255)
cttcttcACTCACCAGTCCTTCAACGCACGGTCCCAGACAGCGCCCTATCTGGTATTGCAGACACGGACGCGAGCGATTGCGATAAACACCAt > 1:2139499/1‑93 (MQ=255)
ttcttcACTCACCAGTCCTTCAACGCACGGTCCCAGACAGCGCCCTATCTGGTATTGCAGACACGGACGCGAGCGATTGCGATAAACACCAtt > 2:1255350/1‑93 (MQ=255)
ttcACTCACCAGTCCTTCAACGCACGGTCCCAGACAGCGCCCTATCTGGTATTGCAGACACGGACGCGAGCGATTGCGATAAACACCATTTTc > 2:6588451/1‑93 (MQ=255)
ttcACTCACCAGTCCTTCAACGCACGGTCCCAGACAGCGCCCTATCTGGTATTGCAGACACGGACGCGAGCGATTGCGATAAACACCATTTTc > 1:6336219/1‑93 (MQ=255)
actcacCAGTCCTTCAACGCACGGTCCCAGACAGCGCCCTATCTGGTATTGCAGACACGGACGCGAGCGATTGCGATAAACACCATTTTCGCa > 1:6234192/1‑93 (MQ=255)
ctcacCAGTCCTTCAACGCACGGTCCCAGACAGCGCCCTATCTGGTATTGCAGACACGGACGCGAGCGATTGCGATAAACACCATTTTCGCAc < 2:7597191/93‑1 (MQ=255)
ctcacCAGTCCTTCAACGCACGGTCCCAGACAGCGCCCTATCTGGTATTGCAGACACGGACGCGAGCGATTGCGATAAACACCATTTTCGCAc < 2:5374200/93‑1 (MQ=255)
ctcacCAGTCCTTCAACGCACGGTCCCAGACAGCGCCCTATCTGGTATTGCAGACACGGACGCGAGCGATTGCGATAAACACCATTTTCGCAc < 2:5143079/93‑1 (MQ=255)
tcacCAGTCCTTCAACGCACGGTCCCAGACAGCGCCCTATCTGGTATTGCAGACACGGACGCGAGCGATTGCGATAAACACCATTTTCGCACt > 2:220812/1‑93 (MQ=255)
tcacCAGTCCTTCAACGCACGGTCCCAGACAGCGCCCTATCTGGTATTGCAGACACGGACGCGAGCGATTGCGATAAACACCATTTTCGCACt > 1:7394208/1‑93 (MQ=255)
acCAGTCCTTCAACGCACGGTCCCAGACAGCGCCCTATCTGGTATTGCAGACACGGACGCGAGCGATTGCGATAAACACCATTTTCGCACTgg > 2:7518454/1‑93 (MQ=255)
acCAGCCCTTCAACGCACGGTCCCAGCCAGCGCCCTATCTGGTATTGCAGACACGGACGCGAGCGATTGCGATAAACACCATTTTCGCACTgg < 1:6990651/93‑1 (MQ=255)
ccAGTCCTTCAACGCACGGTCCCAGACAGCGCCCTATCTGGTATTGCAGACACGGACGCGAGCGATTGCGATAAACACCATTTTCGCACTGGc > 1:7931888/1‑93 (MQ=255)
ccAGTCCTTCAACGCACGGTCCCAGACAGCGCCCTATCTGGTATTGCAGACACGGACGCGAGCGATTGCGATAAACACCATTTTCGCACTGGc > 2:3772732/1‑93 (MQ=255)
cAGTCCTTCAACGCACGGTCCCAGACAGCGCCCTATCTGGTATTGCAGACACGGACGCGAGCGATTGCGATAAACACCATTTTCGCACTGGCg > 1:5281246/1‑93 (MQ=255)
cAGTCCTTCAACGCACGGTCCCAGACAGCGCCCTATCTGGTATTGCAGACACGGACGCGAGCGATTGCGATAAACACCATTTTCGCACTGGCg > 1:5687934/1‑93 (MQ=255)
cAGTCCTTCAACGCACGGTCCCAGACAGCGCCCTATCTGGTATTGCAGACACGGACGCGAGCGATTGCGATAAACACCATTTTCGCACTGGCg < 2:1019079/93‑1 (MQ=255)
aGTCCTTCAACGCACGGTCCCAGACAGCGCCCTATCTGGTATTGCAGACACGGACGCGAGCGATTGCGATAAACACCATTTTCGCACTGGCGa > 1:6448025/1‑93 (MQ=255)
aGTCCTTCAACGCACGGTCCCAGACAGCGCCCTATCTGGTATTGCAGACACGGACGCGAGCGATTGCGATAAACACCATTTTCGCACTGGCGa > 2:7888506/1‑93 (MQ=255)
gTCCTTCAACGCACGGTCCCAGACAGCGCCCTATCTGGTATTGCAGACACGGACGCGAGCGATTGCGATAAACACCATTTTCGCACTGGCGaa > 2:7260738/1‑93 (MQ=255)
ccTTCAACGCCCGGTCCCAGACAGCGCCCTATCTGGTATTGCAGACACGGCCGCGAGCGATTGCGATAAACACCATTTTCGCACTGGCGAATg < 2:861038/93‑1 (MQ=255)
ccTTCAACGCACGGTCCCAGACAGCGCCCTATCTGGTATTGCAGACACGGACGCGAGCGATTGCGATAAACACCATTTTCGCACTGGCGAATg > 2:5995256/1‑93 (MQ=255)
tCAACGCACGGTCCCAGACAGCGCCCTATCTGGTATTGCAGACACGGACGCGAGCGATTGCGATAAACACCATTTTCGCACTGGCGAATgggg > 2:6764942/1‑93 (MQ=255)
tCAACGCACGGTCCCAGACAGCGCCCTATCTGGTATTGCAGACACGGACGCGAGCGATTGCGATAAACACCATTTTCGCACTGGCGAATgggg > 1:1081480/1‑93 (MQ=255)
cAACGCACAGTCCCAGACAGCGCCCTATCTGGTATTGCAGACACGGACGCGAGCGATTGCGATAAACACCATTTTCGCACTGGCGAATGGGGa > 2:1354468/1‑93 (MQ=255)
aaCGCACGGTCCCAGACAGCGCCCTATCTGGTATTGCAGACACGGACGCGAGCGATTGCGATAAACACCATTTTCGCACTGGCGAATGGGGaa > 1:5775047/1‑93 (MQ=255)
aaCGCACGGTCCCAGACAGCGCCCTATCTGGTATTGCAGACACGGACGCGAGCGATTGCGATAAACACCATTTTCGCACTGGCGAATGGGGaa > 1:2249758/1‑93 (MQ=255)
aCGCACGGTCCCAGACAGCGCCCTATCTGGTATTGCAGACACGGACGCGAGCGATTGCGATAAACACCATTTTCGCACTGGCGAATGGGGaaa > 1:3898544/1‑93 (MQ=255)
gCACGGTCCCAGACAGCGCCCTATCTGGTATTGCAGACACGGACGCGAGCGATTGCGATAAACACCATTTTCGCACTGGCGAATGGGGAAAAt > 2:5472727/1‑93 (MQ=255)
aCGGTCCCAGACAGCGCCCTATCTGGTATTGCAGACACGGACGCGAGCGATTGCGATAAACACCATTTTCGCACTGGCGAATGGGGAAAATCt < 1:1200151/93‑1 (MQ=255)
ggTCCCAGACAGCGCCCTATCTGGTATTGCAGACACGGACGCGAGCGATTGCGATAAACACCATTTTCGCACTGGCGAATGGGGAAAATCttt > 2:6462345/1‑93 (MQ=255)
ggTCCCAGACAGCGCCCTATCTGGTATTGCAGACACGGACGCGAGCGATTGCGATAAACACCATTTTCGCACTGGCGAATGGGGAAAATCttt > 1:7544553/1‑93 (MQ=255)
gTCCCAGACAGCGCCCTATCTGGTATTGCAGACACGGACGCGAGCGATTGCGATAAACACCATTTTCGCACTGGCGAATGGGGAAAATCtttt > 2:4115312/1‑93 (MQ=255)
ccAGACAGCGCCCTATCTGGTATTGCAGACACGGACGCGAGCGATTGCGATAAACACCATTTTCGCACTGGCGAATGGGGAAAATCTTTTGCa < 2:4447372/93‑1 (MQ=255)
ccAGACAGCGCCCTATCTGGTATTGCAGACACGGACGCGAGCGATTGCGATAAACACCATTTTCGCACTGGCGAATGGGGAAAATCTTTTGCa > 1:3496213/1‑93 (MQ=255)
ccAGACAGCGCCCTATCTGGTATTGCAGACACGGACGCGAGCGATTGCGATAAACACCATTTTCGCACTGGCGAATGGGGAAAATCTTTTGCa < 1:4824703/93‑1 (MQ=255)
ccAGACAGCGCCCTATCTGGTATTGCAGACACGGACGCGAGCGATTGCGATAAACACCATTTTCGCACTGGCGAATGGGGAAAATCTTTTGCa > 2:623615/1‑93 (MQ=255)
ccAGACAGCGCCCTATCTGGTATTGCAGACACGGACGCGAGCGATTGCGATAAACACCATTTTAGCACTGGCGAATGGGGAAAATCTTTTGCa < 1:2044055/93‑1 (MQ=255)
aGACAGCGCCCTATCTGGTATTGCAGACACGGACGCGAGCGATTGCGATAAACACCATTTTCGCACTGGCGAATGGGGAAAATCTTTTGCAGt < 1:7129046/93‑1 (MQ=255)
aGACAGCGCCCTATCTGGTATTGCAGACACGGACGCGAGCGATTGCGATAAACACCATTTTCGCACTGGCGAATGGGGAAAATCTTTTGCAGt > 1:5829041/1‑93 (MQ=255)
gACAGCGCCCTATCTGGTATTGCAGACACGGACGCGAGCGATTGCGATAAACACCATTTTCGCACTGGCGAATGGGGAAAATCTTTTGCAGTa < 2:5260151/93‑1 (MQ=255)
gACAGCGCCCTATCTGGTATTGCAGACACGGACGCGAGCGATTGCGATAAACACCATTTTCGCACTGGCGAATGGGGAAAATCTTTTGCAGTa > 1:3425730/1‑93 (MQ=255)
aGCGCCCTATCTGGTATTGCAGACACGGACGCGAGCGATTGCGATAAACACCATTTTCGCACTGGCGAATGGGGAAAATCTTTTGCAGTAgcg < 1:5971400/93‑1 (MQ=255)
cgcCCTATCTGGTATTGCAGACACGGACGCGAGCGATTGCGATAAACACCATTTTCGCACTGGCGAATGGGGAAAATCTTTTGCAGTAGCGcc < 2:2721118/93‑1 (MQ=255)
gcCCTATCTGGTATTGCAGACACGGACGCGAGCGATTGCGATAAACACCATTTTCGCACTGGCGAATGGGGAAAATCTTTTGCAGTAGCGCCa < 1:5119731/93‑1 (MQ=255)
cccTATCTGGTATTGCAGACACGGACGCGAGCGATTGCGATAAACACCATTTTCGCACTGGCGAATGGGGAAAATCTTTTGCAGTAGCGCCAg > 2:7132686/1‑93 (MQ=255)
ccTATCTGGTATTGCAGACACGGACGCGAGCGATTGCGATAAACACCATTTTCGCACTGGCGAATGGGGAAAATCTTTTGCAGTAGCGCCAgt < 1:1395087/93‑1 (MQ=255)
cTATCTGGTATTGCAGACACGGACGCGAGCGATTGCGATAAACACCATTTTCGCACTGGCGAATGGGGAAAATCTTTTGCAGTAGCGCCAgtg > 2:2321394/1‑93 (MQ=255)
cTATCTGGTATTGCAGACACGGACGCGAGCGATTGCGATAAACACCATTTTCGCACTGGCGAATGGGGAAAATCTTTTGCAGTAGCGCCAgtg < 2:2152553/93‑1 (MQ=255)
cTATCTGGTATTGCAGACACGGACGCGAGCGATTGCGATAAACACCATTTTCGCACTGGCGAATGGGGAAAATCTTTTGCAGTAGCGCCAgtg < 2:1576808/93‑1 (MQ=255)
tATCTGGTATTGCAGACACGGACGCGAGCGATTGCGATAAACACCATTTTCGCACTGGCGAATGGGGAAAATCTTTTGCAGTAGCGCCAgtgt > 1:1265361/1‑93 (MQ=255)
tCTGGTATTGCAGGCACGGACGCGCGCGATTGCGAGAACCACCATTTTCGCACTGGCGAATGGGGAAAATCTTTTGCAGTAGCGCCAGTGttt < 1:3823543/93‑1 (MQ=255)
tCTGGTATTGCAGACACGGACGCGAGCGATTGCGATAAACACCATTTTCGCACTGGCGAATGGGGAAAATCTTTTGCAGTAGCGCCAGTGttt < 1:2516170/93‑1 (MQ=255)
cTGGTATTGCAGACACGGACGCGAGCGATTGCGATAAACACCATTTTCGCACTGGCGAATGGGGAAAATCTTTTGCAGTAGCGCCAGTGTTTc > 1:4336702/1‑93 (MQ=255)
tGGTATTGCAGACACGGACGCGAGCGATTGCGATAAACACCATTTTCGCACTGGCGAATGGGGAAAATCTTTTGCAGTAGCGCCAGTGTTTCa > 1:102001/1‑93 (MQ=255)
tGGTATTGCAGACACGGACGCGAGCGATTGCGATAAACACCATTTTCGCACTGGCGAATGGGGAAAATCTTTTGCAGTAGCGCCAGTGTTTCa > 1:3676780/1‑93 (MQ=255)
tGGTATTGCAGACACGGACGCGAGCGATTGCGATAAACACCATTTTCGCACTGGCGAATGGGGAAAATCTTTTGCAGTAGCGCCAGTGTTTCa < 1:4942872/93‑1 (MQ=255)
ggTATTGCAGACACGGACGCGAGCGATTGCGATAAACACCATTTTCGCACTGGCGAATGGGGAAAATCTTTTGCAGTAGCGCCAGTGTTTCAc > 2:4221516/1‑93 (MQ=255)
gTATTGCAGACACGGACGCGAGCGATTGCGATAAACACCATTTTCGCACTGGCGAATGGGGAAAATCTTTTGCAGTAGCGCCAGTGTTTCACg < 1:6502989/93‑1 (MQ=255)
tATTGCAGACACGGACGCGAGCGATTGCGATAAACACCATTTTCGCACTGGCGAATGGGGAAAATCTTTTGCAGTAGCGCCAGTGTTTCACGt > 1:6852997/1‑93 (MQ=255)
aTTGCAGACACGGACGCGAGCGATTGCGATAAACACCATTTTCGCACTGGCGAATGGGGAAAATCTTTTGCAGTAGCGCCAGTGTTTCACGTa < 1:3205846/93‑1 (MQ=255)
cAGACACGGACGCGAGCGATTGCGATAAACACCATTTTCGCACTGGCGAATGGGGAAAATCTTTTGCAGTAGCGCCAGTGTTTCACGTACGGc < 2:5603864/93‑1 (MQ=255)
aGACACGGACGCGAGCGATTGCGATAAACACCATTTTCGCACTGGCGAATGGGGAAAATCTTTTGCAGTAGCGCCAGTGTTTCACGTACGGCa < 2:7296587/93‑1 (MQ=255)
gACACGGACGCGAGCGATTGCGATAAACACCATTTTCGCACTGGCGAATGGGGAAAATCTTTTGCAGTAGCGCCAGTGTTTCACGTACGGCAt > 2:6906325/1‑93 (MQ=255)
gACACGGACGCGAGCGATTGCGATAAACACCATTTTCGCACTGGCGAATGGGGAAAATCTTTTGCAGTAGCGCCAGTGTTTCACGTACGGCAt > 1:7243584/1‑93 (MQ=255)
gACACGGACGCGAGCGATTGCGATAAACACCATTTTCGCACTGGCGAATGGGGAAAATCTTTTGCAGTAGCGCCAGTGTTTCACGTACGGCAt > 1:7658307/1‑93 (MQ=255)
cacGGACGCGAGCGATTGCGATAAACACCATTTTCGCACTGGCGAATGGGGAAAATCTTTTGCAGTAGCGCCAGTGTTTCACGTACGGCATAg < 2:1821325/93‑1 (MQ=255)
ggACGCGAGCGATTGCGATAAACACCATTTTCGCACTGGCGAATGGGGAAAATCTTTTGCAGTAGCGCCAGTGTTTCACGTACGGCATAGCCa > 1:3078661/1‑93 (MQ=255)
gACGCGAGCGATTGCGATAAACACCATTTTCGCACTGGCGAATGGGGAAAATCTTTTGCAGTAGCGCCAGTGTTTCACGTACGGCATAGCCAt < 2:2889474/93‑1 (MQ=255)
aCGCGAGCGATTGCGATAAACACCATTTTCGCACTGGCGAATGGGGAAAATCTTTTGCAGTAGCGCCAGTGTTTCACGTACGGCATAGCCAtt < 1:1440528/93‑1 (MQ=255)
cgcgAGCGATTGCGATAAACACCATTTTCGCACTGGCGAATGGGGAAAATCTTTTGCAGTAGCGCCAGTGTTTCACGTACGGCATAGCCATTc < 2:4895491/93‑1 (MQ=255)
cgcgAGCGATTGCGATAAACACCATTTTCGCACTGGCGAATGGGGAAAATCTTTTGCAGTAGCGCCAGTGTTTCACGTACGGCATAGCCATTc < 1:1847953/93‑1 (MQ=255)
cgcgAGCGATTGCGATAAACACCATTTTCGCACTGGCGAATGGGGAAAATCTTTTGCAGTAGCGCCAGTGTTTCACGTACGGCATAGCCATTc < 2:3172412/93‑1 (MQ=255)
gcgagcgaTTGCGATAAACACCATTTTCGCACTGGCGAATGGGGAAAATCTTTTGCAGTAGCGCCAGTGTTTCACGTACGGCATAGCCATTCg < 1:293042/93‑1 (MQ=255)
agcgaTTGCGATAAACACCATTTTCGCACTGGCGAATGGGGAAAATCTTTTGCAGTAGCGCCAGTGTTTCACGTACGGCATAGCCATTCGGGa < 1:4618213/93‑1 (MQ=255)
gcgaTTGCGATAAACACCATTTTCGCACTGGCGAATGGGGAAAATCTTTTGCAGTAGCGCCAGTGTTTCACGTACGGCATAGCCATTCGGGaa < 1:5013045/93‑1 (MQ=255)
gcgaTTGCGATAAACACCATTTTCGCACTGGCGAATGGGGAAAATCTTTTGCAGTAGCGCCAGTGTTTCACGTACGGCATAGCCATTCGGGaa > 1:4254266/1‑93 (MQ=255)
gcgaTTGCGATAAACACCATTTTCGCACTGGCGAATGGGGAAAATCTTTTGCAGTAGCGCCAGTGTTTCACGTACGGCATAGCCATTCGGGaa < 1:1141669/93‑1 (MQ=255)
gcgaTTGCGATAAACACCATTTTCGCACTGGCGAATGGGGAAAATCTTTTGCAGTAGCGCCAGTGTTTCACGTACGGCATAGCCATTCGGGaa < 1:5321286/93‑1 (MQ=255)
gcgaTTGCGATAAACACCATTTTCGCACTGGCGAATGGGGAAAATCTTTTGCAGTAGCGCCAGTGTTTCACGTACGGCATAGCCATTCGGGaa > 1:779905/1‑93 (MQ=255)
ggaTTGCGATAAACACCATTTTCGCACTGGCGAATGGGGAAAATCTTTTGCAGTAGCGCCAGTGTTTCACGTACGGCATAGCCATTCGGGAAc < 2:4051277/92‑1 (MQ=255)
cgaTTGCGATAAACACCATTTTCGCACTGGCGAATGGGGAAAATCTTTTGCAGTAGCGCCAGTGTTTCACGTACGGCATAGCCATTCGGGAAc < 2:4591032/93‑1 (MQ=255)
gaTTGCGATAAACACCATTTTCGCACTGGCGAATGGGGAAAATCTTTTGCAGTAGCGCCAGTGTTTCACGTACGGCATAGCCATTCGGGAACg > 2:3897862/1‑93 (MQ=255)
gaTTGCGATAAACACCATTTTCGCACTGGCGAATGGGGAAAATCTTTTGCAGTAGCGCCAGTGTTTCACGTACGGCATAGCCATTCGGGAACg > 2:2861612/1‑93 (MQ=255)
aTTGCGATAAACACCATTTTCGCACTGGCGAATGGGGAAAATCTTTTGCAGTAGCGCCAGTGTTTCACGTACGGCATAGCCATTCGGGAACgg > 2:3127245/1‑93 (MQ=255)
aTTGCGATAAACACCATTTTCGCACTGGCGAATGGGGAAAATCTTTTGCAGTAGCGCCAGTGTTTCACGTACGGCATAGCCATTCGGGAACgg > 1:2385566/1‑93 (MQ=255)
aTTGCGATAAACACCATTTTCGCACTGGCGAATGGGGAAAATCTTTTGCAGTAGCGCCAGTGTTTCACGTACGGCATAGCCATTCGGGAACgg > 2:77499/1‑93 (MQ=255)
tGCGATAAACACCATTTTCGCACTGGCGAATGGGGAAAATCTTTTGCAGTAGCGCCAGTGTTTCACGTACGGCATAGCCATTCGGGAACGGGc < 1:7700008/93‑1 (MQ=255)
gCGATAAACACCATTTTCGCACTGGCGAATGGGGAAAATCTTTTGCAGTAGCGCCAGTGTTTCACGTACGGCATAGCCATTCGGGAACGGGcc < 1:1552388/93‑1 (MQ=255)
cGATAAACACCATTTTCGCACTGGCGAATGGGGAAAATCTTTTGCAGTAGCGCCAGTGTTTCACGTACGGCATAGCCATTCGGGAACGGGCCg < 2:1094122/93‑1 (MQ=255)
gATAAACACCATTTTCGCACTGGCGAATGGGGAAAATCTTTTGCAGTAGCGCCAGTGTTTCACGTACGGCATAGCCATTCGGGAACGGGCCGa > 2:5430519/1‑93 (MQ=255)
gATAAACACCATTTTCGCACTGGCGAATGGGGAAAATCTTTTGCAGTAGCGCCAGTGTTTCACGTACGGCATAGCCATTCGGGAACGGGCCGa > 2:2629327/1‑93 (MQ=255)
gATAAACACCATTTTCGCACTGGCGAATGGGGAAAATCTTTTGCAGTAGCGCCAGTGTTTCACGTACGGCATAGCCATTCGGGAACGGGCCGa > 2:5043654/1‑93 (MQ=255)
aTAAACACCATTTTCGCACTGGCGAATGGGGAAAATCTTTTGCAGTAGCGCCAGTGTTTCACGTACGGCATAGCCATTCGGGAACGGGCCGaa > 2:4310680/1‑93 (MQ=255)
acacCATTTTCGCACTGGCGAATGGGGAAAATCTTTTGCAGTAGCGCCAGTGTTTCACGTACGGCATAGCCATTCGGGAACGGGCCGAAatat > 2:3573097/1‑93 (MQ=255)
acacCATTTTCGCACTGGCGAATGGGGAAAATCTTTTGCAGTAGCGCCAGTGTTTCACGTACGGCATAGCCATTCGGGAACGGGCCGAAatat < 2:2361948/93‑1 (MQ=255)
cacCATTTTCGCACTGGCGAATGGGGAAAATCTTTTGCAGTAGCGCCAGTGTTTCACGTACGGCATAGCCATTCGGGAACGGGCCGAAATAtt > 2:4485164/1‑93 (MQ=255)
cacCATTTTCGCACTGGCGAATGGGGAAAATCTTTTGCAGTAGCGCCAGTGTTTCACGTACGGCATAGCCATTCGGGAACGGGCCGAAATAtt > 2:4598390/1‑93 (MQ=255)
|
CTTCTTCACTCACCAGTCCTTCAACGCACGGTCCCAGACAGCGCCCTATCTGGTATTGCAGACACGGACGCGAGCGATTGCGATAAACACTATTTTCGCACTGGCGAATGGGGAAAATCTTTTGCAGTAGCGCCAGTGTTTCACGTACGGCATAGCCATTCGGGAACGGGCCGAAATATT > NC_000913/1992171‑1992350
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
ATTCTTCTTCACTCACCAGTCCTTCAACGCACGGTCCCAGACAGCGCCCTATCTGGTATTGCAGACACGGACGCGAGCGATTGCGATAAACACTATTTTCGCACTGGCGAATGGGGAAAATCTTTTGCAGTAGCGCCAGTGTTTCACGTACGGCATAGCCATTCGGGAACGGGCCGAAATATTCACC > NC_000913/1992168‑1992354
|
ATTCTTCTTCACTCACCAGTCCTTCAACGCACGGTCCCAGACAGCGCCCTATCTGGTATTGCGGACACGGACGCGAGCGATTGCGATAAACACC > SRR4302543.4164593/1‑94 (MQ=60)
ATTCTTCTTCACTCACCAGTCCTTCAACGCACGGTCCCAGACAGCGCCCTATCTGGTATTGCAGACACGGACGCGAGCGATTGCGATAAACACC > SRR4302543.4164594/1‑94 (MQ=60)
ATTCTTCTTCACTCACCAGTCCTTCAACGCACGGTCCCAGACAGCGCCCTATCTGGTATTGCAGACACGGACGCGAGCGATTGCGATAAACACC > SRR4302543.3845492/1‑94 (MQ=60)
ATTCTTCTTCACTCACCAGTCCTTCAACGCACGGTCCCAGACAGCGCCCTATCTGGTATTGCAGACACGGACGCGAGCGATTGCGATAAACACC > SRR4302543.1245020/1‑94 (MQ=60)
TTCTTCTTCACTCACCAGTCCTTCAACGCACGGTCCCAGACAGCGACCTATCTGGTATTGCAGACACGGACGCGAGCGATTGCGATAAACACCA > SRR4302543.6234151/1‑94 (MQ=60)
TCTTCTTCACTCACCAGTCCTTCAACGCACGGTCCCAGACAGCGCCCTATCTGGTATTGCAGACACGGACGCGAGCGATTGCGATAAACACCAT > SRR4302543.7932003/1‑94 (MQ=60)
TCTTCTTCACTCACCAGTCCTTCAACGCACGGTCCCAGACAGCGCCCTATCTGGTATTGCAGACACGGACGCGAGCGATTGCGATAAACACCAT > SRR4302543.2158649/1‑94 (MQ=60)
CTTCTTCACTCACCAGTCCTTCAACGCACGGTCCCAGACAGCGCCCTATCTGGTATTGCAGACACGGACGCGAGCGATTGCGATAAACACCATT < SRR4302543.6736451/94‑1 (MQ=60)
TTCTTCACTCACCAGTCCTTCAACGCACGGTCCCAGACAGCGCCCTATCTGGCATTGCAGAGACGCACGCGAGCGATTGCGAGAAACACCATTT > SRR4302543.6226931/1‑94 (MQ=60)
TCTTCACTCACCAGTCCTTCAACGCACGGTCCCAGACAGCGCCCTATCTGGTATTGCAGACACGGACGCGAGCGATTGCGATAAACACCATTTT > SRR4302543.1123154/1‑94 (MQ=60)
CTTCACTCACCAGTCCTTCAACGCACGGTCCCAGACAGCGCCCTATCTGGTATTGCAGACACGGACGCGAGCGATTGCGATAAACACCATTTTC > SRR4302543.5984669/1‑94 (MQ=60)
CTTCACTCACCAGTCCTTCAACGCACGGTCCCAGACAGCGCCCTATCTGGTATTGCAGACACGGACGCGAGCGATTGCGATAAACACCATTTTC > SRR4302543.1602493/1‑94 (MQ=60)
CTTCACTCACCAGTCCTTCAACGCACGGTCCCAGACAGCGCCCTATCTGGTATTGCAGACACGGACGCGAGCGATTGCGATAAACACCATTTTC > SRR4302543.6395808/1‑94 (MQ=60)
CACTCACCAGTCCTTCAACGCACGGTCCCAGACAGCGCCCTATCTGGTATTGCAGACACGGACGCGAGCGATTGCGATAAACACCATTTTCGCA > SRR4302543.6293030/1‑94 (MQ=60)
CACTCACCAGTCCTTCAACGCACGGTCCCAGACAGCGCCCTATCTGGTATTGCAGACACGGACGCGAGCGATTGCGATAAACACCATTTTCGCA < SRR4302543.694146/94‑1 (MQ=60)
CTCACCAGTCCTTCAACGCACGGTCCCAGACAGCGCCCTATCTGGTATTGCAGACACGGACGCGAGCGATTGCGATAAACACCATTTTCGCACT > SRR4302543.7465222/1‑94 (MQ=60)
CTCACCAGTCCTTCAACGCACGGTCCCAGACAGCGCCCTATCTGGTATTGCAGACACGGACGCGAGCGATTGCGATAAACACCATTTTCGCACT < SRR4302543.6446265/94‑1 (MQ=60)
CTCACCAGTCCTTCAACGCACGGGCCCAGACAGCGCCCTATCTGGTATTGCAGGCACGGACGCGAGCGATTGCGATAAACACCATTTTCGCACT > SRR4302543.4906806/1‑94 (MQ=60)
TCACCAGTCCTTCAACGCACGGTCCCAGACAGCGCCCTATCTGGTATTGCAGACACGGACGCGAGCGATTGCGATAAACACCATTTTCGCACTG < SRR4302543.3194959/94‑1 (MQ=60)
TCACCAGTCCTTCAACGCACGGTCCCAGACAGCGCCCTATCTGGTATTGCAGACACGGACGCGAGCGATTGCGATAAACACCATTTTCGCACTG < SRR4302543.5551492/94‑1 (MQ=60)
ACCAGTCCTTCAACGCACGGTCCCAGACAGCGCCCTATCTGGTATTGCAGACACGGACGCGAGCGATTGCGATAAACACCATTTTCGCACTGGC > SRR4302543.8006348/1‑94 (MQ=60)
ACCAGCCCTTCAACGCACGGTCCCAGCCAGCGCCCTATCTGGTATTGCAGACACGGACGCGAGCGATTGCGATAAACACCATTTTCGCACTGGC < SRR4302543.7056450/94‑1 (MQ=60)
CCAGTCCTTCAACGCACGGTCCCAGACAGCGCCCTATCTGGTATTGCAGACACGGACGCGAGCGATTGCGATAAACACCATTTTCGCACTGGCG > SRR4302543.5328907/1‑94 (MQ=60)
CCAGTCCTTCAACGCACGGTCCCAGACAGCGCCCTATCTGGTATTGCAGACACGGACGCGAGCGATTGCGATAAACACCATTTTCGCACTGGCG > SRR4302543.5739842/1‑94 (MQ=60)
CAGTCCTTCAACGCACGGTCCCAGACAGCGCCCTATCTGGTATTGCAGACACGGACGCGAGCGATTGCGATAAACACCATTTTCGCACTGGCGA > SRR4302543.6508781/1‑94 (MQ=60)
AGTCCTTCAACGCACGGTCCCAGACAGCGCCCTATCTGGTATTGCAGACACGGACGCGAGCGATTGCGATAAACACCATTTTCGCACTGGCGAT > SRR4302543.2242089/1‑94 (MQ=60)
AGTCCTTCAACGCACGGTCCCAGACAGCGCCCTATCTGGTATTGCAGACACGGACGCGAGCGATTGCGATAAACACCATTTTCGCACTGGCGAA > SRR4302543.4988842/1‑94 (MQ=60)
AGTCCTTCAACGCACGGTCCCAGACAGCGCCCTATCTGGTATTGCAGACACGGACGCGAGCGATTGCGATAAACACCATTTTCGCACTGGCGAA > SRR4302543.6050095/1‑94 (MQ=60)
AGTCCTTCAACGCACGGTCCCAGACAGCGCCCTATCTGGTATTGCAGACACGGACGCGAGCGATTGCGATAAACACAATTTTCGCcctggagat > SRR4302543.4988841/1‑85 (MQ=60)
GTCCTTCAACGCACGGTCCCAGACAGCGCCCTATCTGGTATTGCAGACACGGACGCGAGCGATTGCGATAAACACCATTTTCGCACTGGCGAAT < SRR4302543.4681208/94‑1 (MQ=60)
CCTTCAACGCACGGTCCCAGACAGCGCCCTATCTGGTATTGCAGACACGGACGCGAGCGATTGCGATAAACACCATTTTCGCACTGGCGAATGG < SRR4302543.7258804/94‑1 (MQ=60)
CTTCAACGCACGGTCCCAGACAGCGCCCTATCTGGTATTGCAGACACGGACGCGAGCGATTGCGATAAACACCATTTTCGCACTGGCGAATGGG > SRR4302543.6831843/1‑94 (MQ=60)
CTTCAACGCACGGTCCCAGACAGCGCCCTATCTGGTATTGCAGACACGGACGCGAGCGATTGCGATAAACACCATTTTCGCACTGGCGAATGGG > SRR4302543.3472115/1‑94 (MQ=60)
CTTCAACGCACGGTCCCAGACAGCGCCCTATCTGGTATTGCAGACACGGACGCGAGCGATTGCGATAAACACCATTTTCGCACTGGCGAATGGG < SRR4302543.7889393/94‑1 (MQ=60)
CTTCAACGCACGGTCCCAGACAGCGCCCTATCTGGTATTGCAGACACGGACGCGAGCGATTGCGATAAACACCATTTTCGCACTGGCGAATGGG > SRR4302543.7610118/1‑94 (MQ=60)
TTCAACGCACGGTCCCAGACAGCGCCCTATCTGGTATTGCAGACACGGACGCGAGCGATTGCGATAAACACCATTTTCGCACTGGCGAATGGGG > SRR4302543.1091202/1‑94 (MQ=60)
TTCAACGCACGGTCCCAGACAGCGCCCTATCTGGTATTGCAGACACGGACGCGAGCGATTGCGATAAACACCATTTTCGCACTGGCGAATGGGG > SRR4302543.1206363/1‑94 (MQ=60)
TTCAACGCACGGTCCCAGACAGCGCCCTATCTGGTATTGCAGACACGGACGCGAGCGATTGCGATAAACACCATTTTCGCACTGGCGAATGGGG > SRR4302543.4055659/1‑94 (MQ=60)
CAACGCACGGTCCCAGACAGCGCCCTATCTGGTATTGCAGACACGGACGCGAGCGATTGCGATAAACACCATTTTCGCACTGGCGAATGGGGAA > SRR4302543.5827616/1‑94 (MQ=60)
CAACGCACGGTCCCAGACAGCGCCCTATCTGGTATTGCAGACACGGACGCGAGCGATTGCGATAAACACCATTTTCGCACTGGCGAATGGGGAA > SRR4302543.2270191/1‑94 (MQ=60)
AACGCACGGTCCCAGACAGCGCCCTATCTGGTATTGCAGACACGGACGCGAGCGATTGCGATAAACACCATTTTCGCACTGGCGAATGGGGAAA > SRR4302543.1318631/1‑94 (MQ=60)
AACGCACGGTCCCAGACAGCGCCCTATCTGGTATTGCAGACACGGACGCGAGCGATTGCGATAAACACCATTTTCGCACTGGCGAATGGGGAAA > SRR4302543.3932971/1‑94 (MQ=60)
GCACGGTCCCAGACAGCGCCCTATCTGGTATTGCAGACACGGACGCGAGCGATTGCGATAAACACCATTTTCGCACTGGCGAATGGGGAAAATC < SRR4302543.1213481/94‑1 (MQ=60)
CACGGTCCCAGACAGCGCCCTATCTGGTATTGCAGACACGGACGCGAGCGATTGCGATAAACACCATTTTCGCACTGGCGAATGGGGAAAATCT < SRR4302543.3904321/94‑1 (MQ=60)
ACGGTCCCAGACAGCGCCCTATCTGGTATTGCAGACACGGACGCGAGCGATTGCGATAAACACCATTTTCGCACTGGCGAATGGGGAAAATCTT < SRR4302543.1210955/94‑1 (MQ=60)
CGGTCCCAGACAGCGCCCTATCTGGTATTGCAGACACGGACGCGAGCGATTGCGATAAACACCATTTTCGCACTGGCGAATGGGGAAAATCTTT > SRR4302543.7616437/1‑94 (MQ=60)
TCCCAGACAGCGCCCTATCTGGTATTGCAGACACGGACGCGAGCGATTGCGATAAACACCATTTTCGCACTGGCGAATGGGGAAAATCTTTTGC < SRR4302543.5351521/94‑1 (MQ=60)
TCCCAGACAGCGCCCTATCTGGTATTGCAGACACGGACGCGAGCGATTGCGATAAACACCATTTTCGCACTGGCGAATGGGGAAAATCTTTTGC > SRR4302543.5874673/1‑94 (MQ=60)
TCCCAGACAGCGCCCTATCTGGTATTGCAGACACGGACGCGAGCGATTGCGATAAACACCATTTTCGCACTGGCGAATGGGGAAAATCTTTTGC > SRR4302543.4251727/1‑94 (MQ=60)
TCCCAGACAGCGCCCTATCTGGTATTGCAGACACGGACGCGAGCGATTGCGATAAACACCATTTTCGCACTGGCGAATGGGGAAAATCTTTTGC > SRR4302543.1957602/1‑94 (MQ=60)
CCCAGACAGCGCCCTATCTGGTATTGCAGACACGGACGCGAGCGATTGCGATAAACACCATTTTCGCACTGGCGAATGGGGAAAATCTTTTGCA > SRR4302543.3527493/1‑94 (MQ=60)
CCCAGACAGCGCCCTATCTGGTATTGCAGACACGGACGCGAGCGATTGCGATAAACACCATTTTCGCACTGGCGAATGGGGAAAATCTTTTGCA > SRR4302543.2631675/1‑94 (MQ=60)
CCCAGACAGCGCCCTATCTGGTATTGCAGACACGGACGCGAGCGATTGCGATAAACACCATTTTCGCACTGGCGAATGGGGAAAATCTTTTGCA > SRR4302543.4378170/1‑94 (MQ=60)
CCAGACAGCGCCCTATCTGGTATTGCAGACACGGACGCGAGCGATTGCGATAAACACCATTTTCGCACTGGCGAATGGGGAAAATCTTTTGCAG < SRR4302543.4868735/94‑1 (MQ=60)
CCAGACAGCGCCCTATCTGGTATTGCAGACACGGACGCGAGCGATTGCGATAAACACCATTTTAGCACTGGCGAATGGGGAAAATCTTTTGCAG < SRR4302543.2062383/94‑1 (MQ=60)
CAGACAGCGCCCTATCTGGTATTGCAGACACGGACGCGAGCGATTGCGATAAACACCATTTTCGCACTGGCGAATGGGGAAAATCTTTTGCAGT < SRR4302543.7752726/94‑1 (MQ=60)
CAGACAGCGCCCTATCTGGTATTGCAGACACGGACGCGAGCGATTGCGATAAACACCATTTTCGCACTGGCGAATGGGGAAAATCTTTTGCAGT > SRR4302543.5882056/1‑94 (MQ=60)
AGACAGCGCCCTATCTGGTATTGCAGACACGGACGCGAGCGATTGCGATAAACACCATTTTCGCACTGGCGAATGGGGAAAATCTTTTGCAGTA < SRR4302543.7198323/94‑1 (MQ=60)
AGACAGCGCCCTATCTGGTATTGCAGACACGGACGCGAGCGATTGCGATAAACACCATTTTCGCACTGGCGAATGGGGAAAATCTTTTGCAGTA > SRR4302543.836879/1‑94 (MQ=60)
AGACAGCGCCCTATCTGGTATTGCAGACACGGACGCGAGCGATTGCGATAAACACCATTTTCGCACTGGCGAATGGGGAAAATCTTTTGCAGTA > SRR4302543.3456383/1‑94 (MQ=60)
AGACAGCGCCCTATCTGGTATTGCAGACACGGACGCGAGCGATTGCGATAAACACCATTTTCGCACTGGCGAATGGGGAAAATCTTTTGCAGTA > SRR4302543.3456384/1‑94 (MQ=60)
CAGCGCCCTATCTGGTATTGCAGACACGGACGCGAGCGATTGCGATAAACACCATTTTCGCACTGGCGAATGGGGAAAATCTTTTGCAGTAGCG < SRR4302543.5098838/94‑1 (MQ=60)
AGCGCCCTATCTGGTATTGCAGACACGGACGCGAGCGATTGCGATAAACACCATTTTCGCACTGGCGAATGGGGAAAATCTTTTGCAGTAGCGC < SRR4302543.6026089/94‑1 (MQ=60)
GCCCTATCTGGTATTGCAGACACGGACGCGAGCGATTGCGATAAACACCATTTTCGCACTGGCGGATGGGGAAAATCTTTTGCAGTAGCGCAAG > SRR4302543.2566001/1‑94 (MQ=60)
GCCCTATCTGGTATTGCAGACACGGACGCGAGCGATTGCGATAAACACCATTTTCGCACTGGCGAATGGGGAAAATCTTTTGCAGTAGCGCCAG < SRR4302543.5166028/94‑1 (MQ=60)
CCCTATCTGGTATTGCAGACACGGACGCGAGCGATTGCGATAAACACCATTTTCGCACTGGCGAATGGGGAAAATCTTTTGCAGTAGCGCCAGT > SRR4302543.1070422/1‑94 (MQ=60)
CCTATCTGGTATTGCAGACACGGACGCGAGCGATTGCGATAAACACCATTTTCGCACTGGCGAATGGGGAAAATCTTTTGCAGTAGCGCCAGTG < SRR4302543.1354843/94‑1 (MQ=60)
CCTATCTGGTATTGCAGACACGGACGCGAGCGATTGCGATAAACACCATTTTCGCACTGGCGAATGGGGAAAATCTTTTGCAGTAGCGCCAGTG < SRR4302543.1407663/94‑1 (MQ=60)
CTATCTGGTATTGCAGACACGGACGCGAGCGATTGCGATAAACACCATTTTCGCACTGGCGAATGGGGAAAATCTTTTGCAGTAGCGCCAGTGT > SRR4302543.1276688/1‑94 (MQ=60)
CTATCTGGTATTGCAGACACGGACGCGAGCGATTGCGATAAACACCATTTTCGCACTGGCGAATGGGGAAAATCTTTTGCAGTAGCGCCAGTGT > SRR4302543.1883162/1‑94 (MQ=60)
ATCTGGTATTGCAGACACGGACGCGAGCGATTGCGATAAACACCATTTTCGCACTGGCGAATGGGGAAAATCTTTTGCAGTAGCGCCAGTGTTT < SRR4302543.7974694/94‑1 (MQ=60)
ATCTGGTATTGCAGACACGGACGCGAGCGATTGCGATAAACACCATTTTCGCACTGGCGAATGGGGAAAATCTTTTGCAGTAGCGCCAGTGTTT > SRR4302543.6820926/1‑94 (MQ=60)
TCTGGTATTGCAGGCACGGACGCGCGCGATTGCGAGAACCACCATTTTCGCACTGGCGAATGGGGAAAATCTTTTGCAGTAGCGCCAGTGTTTC < SRR4302543.3857268/94‑1 (MQ=60)
TCTGGTATTGCAGACACGGACGCGAGCGATTGCGATAAACACCATTTTCGCACTGGCGAATGGGGAAAATCTTTTGCAGTAGCGCCAGTGTTTC < SRR4302543.2539025/94‑1 (MQ=60)
TCTGGTATTGCAGACACGGACGCGAGCGATTGCGATAAACACCATTTTCGCACTGGCGAATGGGGAAAATCTTTTGCAGTAGCGCCAGTGTTTC > SRR4302543.4376032/1‑94 (MQ=60)
TCTGGTATTGCAGACACGGACGCGAGCGATTGCGATAAACACCATTTTCGCACTGGCGAATGGGGAAAATCTTTTGCAGTAGCGCCAGTGTTTC > SRR4302543.4376033/1‑94 (MQ=60)
CTGGTATTGCAGACACGGACGCGAGCGATTGCGATAAACACCATTTTCGCACTGGCGAATGGGGAAAATCTTTTGCAGTAGCGCCAGTGTTTCA < SRR4302543.7844724/94‑1 (MQ=60)
CTGGTATTGCAGACACGGACGCGAGCGATTGCGATAAACACCATTTTCGCACTGGCGAATGGGGAAAATCTTTTGCAGTAGCGCCAGTGTTTCA > SRR4302543.102943/1‑94 (MQ=60)
CTGGTATTGCAGACACGGACGCGAGCGATTGCGATAAACACCATTTTCGCACTGGCGAATGGGGAAAATCTTTTGCAGTAGCGCCAGTGTTTCA > SRR4302543.3709073/1‑94 (MQ=60)
TGGTATTGCAGACACGGACGCGAGCGATTGCGATAAACACCATTTTCGCACTGGCGAATGGGGAAAATCTTTTGCAGTAGCGCCAGTGTTTCAC < SRR4302543.4987880/94‑1 (MQ=60)
GGTATTGCAGACACGGACGCGAGCGATTGCGATAAACACCATTTTCGCACTGGCGAATGGGGAAAATCTTTTGCAGTAGCGCCAGTGTTTCACG > SRR4302543.1466883/1‑94 (MQ=60)
GGTATTGCAGACACGGACGCGAGCGATTGCGATAAACACCATTTTCGCACTGGCGAATGGGGAAAATCTTTTGCAGTAGCGCCAGTGTTTCACG < SRR4302543.5635295/94‑1 (MQ=60)
GTATTGCAGACACGGACGCGAGCGATTGCGATAAACACCATTTTCGCACTGGCGAATGGGGAAAATCTTTTGCAGTAGCGCCAGTGTTTCACGT > SRR4302543.6917628/1‑94 (MQ=60)
GTATTGCAGACACGGACGCGAGCGATTGCGATAAACACCATTTTCGCACTGGCGAATGGGGAAAATCTTTTGCAGTAGCGCCAGTGTTTCACGT < SRR4302543.6564247/94‑1 (MQ=60)
ATTGCAGACACGGACGCGAGCGATTGCGATAAACACCATTTTCGCACTGGCGAATGGGGAAAATCTTTTGCAGTAGCGCCAGTGTTTCACGTAC < SRR4302543.3234771/94‑1 (MQ=60)
AGACACGGACGCGAGCGATTGCGATAAACACCATTTTCGCACTGGCGAATGGGGAAAATCTTTTGCAGTAGCNCCAGTGTTTCACGTACGGCAT > SRR4302543.37687/1‑94 (MQ=60)
AGACACGGACGCGAGCGATTGCGATAAACACCATTTTCGCACTGGCGAATGGGGAAAATCTTTTGCAGTAGCGCCAGTGTTTCACGTACGGCAT < SRR4302543.2958523/94‑1 (MQ=60)
AGACACGGACGCGAGCGATTGCGATAAACACCATTTTCGCACTGGCGAATGGGGAAAATCTTTTGCAGTAGCGCCAGTGTTTCACGTACGGCAT > SRR4302543.7313676/1‑94 (MQ=60)
AGACACGGACGCGAGCGATTGCGATAAACACCATTTTCGCACTGGCGAATGGGGAAAATCTTTTGCAGTAGCGCCAGTGTTTCACGTACGGCAT > SRR4302543.7730902/1‑94 (MQ=60)
GACACGGACGCGAGCTATTGCGATAAGCTCCATTTTCGCACTGGCGAATGGGGAAAATCTTTTGCAGTAGCGCCAGTGTTTCACGTACGGCATA < SRR4302543.6596236/94‑1 (MQ=60)
ACACGGACGCGAGCGATTGCGATAAACACCATTTTCGCACTGGCGAATGGGGAAAATCTTTTGCAGTAGCGCCAGTGTTTCACGTACGGCATAG > SRR4302543.7387629/1‑94 (MQ=60)
CGGACGCGAGCGATTGCGATAAACACCATTTTCGCACTGGCGAATGGGGAAAATCTTTTGCAGTAGCGCCAGTGTTTCACGTACGGCATAGCCA > SRR4302543.3106347/1‑94 (MQ=60)
GGACGCGAGCGATTGCGATAAACACCATTTTCGCACTGGCGAATGGGGAAAATCTTTTGCAGTAGCGCCAGTGTTTCACGTACGGCACAGCCAT > SRR4302543.5190719/1‑94 (MQ=60)
ACGCGAGCGATTGCGATAAACACCATTTTCGCACTGGCGAATGGGGAAAATCTTTTGCAGTAGCGCCAGTGTTTCACGTACGGCATAGCCATTC < SRR4302543.1453544/94‑1 (MQ=60)
CGCGAGCGATTGCGATAAACACCATTTTCGCACTGGCGAATGGGGAAAATCTTTTGCAGTAGCGCCAGTGTTTCACGTACGGCATAGCCATTCG < SRR4302543.21035/94‑1 (MQ=60)
CGCGAGCGATTGCGATAAACACCATTTTCGCACTGGCGAATGGGGAAAATCTTTTGCAGTAGCGCCAGTGTTTCACGTACGGCATAGCCATTCG < SRR4302543.1864572/94‑1 (MQ=60)
GCGAGCGATTGCGATAAACACCATTTTCGCACTGGCGAATGGGGAAAATCTTTTGCAGTAGCGCCAGTGTTTCACGTACGGCATAGCCATTCGG < SRR4302543.295668/94‑1 (MQ=60)
AGCGATTGCGATAAACACCATTTTCGCACTGGCGAATGGGGAAAATCTTTTGCAGTAGCGCCAGTGTTTCACGTACGGCATAGCCATTCGGGAA > SRR4302543.4292882/1‑94 (MQ=60)
AGCGATTGCGATAAACACCATTTTCGCACTGGCGAATGGGGAAAATCTTTTGCAGTAGCGCCAGTGTTTCACGTACGGCATAGCCATTCGGGAA > SRR4302543.786758/1‑94 (MQ=60)
AGCGATTGCGATAAACACCATTTTCGCACTGGCGAATGGGGAAAATCTTTTGCAGTAGCGCCAGTGTTTCACGTACGGCATAGCCATTCGGGAA > SRR4302543.786759/1‑94 (MQ=60)
AGCGATTGCGATAAACACCATTTTCGCACTGGCGAATGGGGAAAATCTTTTGCAGTAGCGCCAGTGTTTCACGTACGGCATAGCCATTCGGGAA < SRR4302543.4660173/94‑1 (MQ=60)
GCGATTGCGATAATCACCATTTTCGCACTGGCGAATGGGGACAATCTTTTGCAGTAGCGCCAGTGTTTCACGTACGGCATAGCCATTCGGGAAC < SRR4302543.7084463/94‑1 (MQ=60)
GCGATTGCGATAAACACCATTTTCGCACTGGCGAATGGGGAAAATCTTTTGCAGTAGCGCCAGTGTTTCACGTACGGCATAGCCATTCGGGAAC < SRR4302543.5058668/94‑1 (MQ=60)
GCGATTGCGATAAACACCATTTTCGCACTGGCGAATGGGGAAAATCTTTTGCAGTAGCGCCAGTGTTTCACGTACGGCATAGCCATTCGGGAAC < SRR4302543.1152070/94‑1 (MQ=60)
GCGATTGCGATAAACACCATTTTCGCACTGGCGAATGGGGAAAATCTTTTGCAGTAGCGCCAGTGTTTCACGTACGGCATAGCCATTCGGGAAC < SRR4302543.5369380/94‑1 (MQ=60)
GCGATTGCGATAAACACCATTTTCGCACTGGCGAATGGGGAAAATCTTTTGCAGTAGCGCCAGTGTTTCACGTACGGCATAGCCATTCGGGAAC < SRR4302543.2371434/94‑1 (MQ=60)
GATTGCGATAAACACCATTTTCGCACTGGCGAATGGGGAAAATCTTTTGCAGTAGCGCCAGTGTTTCACGTACGGCATAGCCATTCGGGAACGG > SRR4302543.2407164/1‑94 (MQ=60)
GATTGCGATAAACACCATTTTCGCACTGGCGAATGGGGAAAATCTTTTGCAGTAGCGCCAGTGTTTCACGTACGGCATAGCCATTCGGGAACGG > SRR4302543.2534148/1‑94 (MQ=60)
GATTGCGATAAACACCATTTTCGCACTGGCGAATGGGGAAAATCTTTTGCAGTAGCGCCAGTGTTTCACGTACGGCATAGCCATTCGGGAACGG > SRR4302543.5787479/1‑94 (MQ=60)
ATTGCGATAAACACCATTTTCGCACTGGCGAATGGGGAAAATCTTTTGCAGTAGCGCCAGTGTTTCACGTACGGCATAGCCATTCGGGAACGGG < SRR4302543.6561234/94‑1 (MQ=60)
TTGCGATAAACACCAGTTTCGCACTGGCGAATGGGGAAAATCTTTTGCAGTAGCGCCAGTGTTTCACGTACGGCATAGCCATTCGGGAACGGGC < SRR4302543.7651857/94‑1 (MQ=60)
TGCGATAAACACCATTTTCGCACTGGCGAATGGGGAAAATCTTTTGCAGTAGCGCCAGTGTTTCACGTACGGCATAGCCATTCGGGAACGGGCC < SRR4302543.7772886/94‑1 (MQ=60)
TGCGATAAACACCATTTTCGCACTGGCGAATGGGGAAAATCTTTTGCAGTAGCGCCAGTGTTTCACGTACGGCATAGCCATTCGGGAACGGGCC > SRR4302543.7368616/1‑94 (MQ=60)
GCGATAAACACCATTTTCGCACTGGCGAATGGGGAAAATCTTTTGCAGTAGCGCCAGTGTTTCACGTACGGCATAGCCATTCGGGAACGGGCCG < SRR4302543.1566273/94‑1 (MQ=60)
CGATAAACACCATTTTCGCACTGGCGAATGGGGAAAATCTTTTGCAGTAGCGCCAGTGTTTCACGTACGGCATAGCCATTCGGGAACGGGCCGA > SRR4302543.3579627/1‑94 (MQ=60)
AACACCATTTTCGCACTGGCGAATGGGGAAAATCTTTTGCAGTAGCGCCAGTGTTTCACGTACGGCATAGCCATTCGGGAACGGGCCGAAATAT < SRR4302543.1421213/94‑1 (MQ=60)
AACACCATTTTCGCACTGGCGAATGGGGAAAATCTTTTGCAGTAGCGCCAGTGTTTCACGTACGGCATAGCCATTCGGGAACGGGCCGAAATAT < SRR4302543.4969654/94‑1 (MQ=60)
ACACCATTTTCGCACTGGCGAATGGGGAAAATCTTTTGCAGTAGCGCCAGTGTTTCACGTACGGCATAGCCATTCGGGAACGGGCCGAAATATT < SRR4302543.3243562/94‑1 (MQ=60)
CACCATTTTCGCACTGGCGAATGGGGAAAATCTTTTGCAGTAGCGCCAGTGTTTCACGTACGGCATAGCCATTCGGGAACGGGCCGAAATATTC < SRR4302543.629324/94‑1 (MQ=60)
CATTTTCGCACTGGCGAATGGGGAAAATCTTTTGCAGTAGCGCCAGTGTTTCACGTACGGCATAGCCATTCGGGAACGGGCCGAAATATTCACC > SRR4302543.2074291/1‑94 (MQ=60)
CATTTTCGCACTGGCGAATGGGGAAAATCTTTTGCAGTAGCGCCAGTGTTTCACGTACGGCATAGCCATTCGGGAACGGGCCGAAATATTCACC < SRR4302543.4350391/94‑1 (MQ=60)
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ATTCTTCTTCACTCACCAGTCCTTCAACGCACGGTCCCAGACAGCGCCCTATCTGGTATTGCAGACACGGACGCGAGCGATTGCGATAAACACTATTTTCGCACTGGCGAATGGGGAAAATCTTTTGCAGTAGCGCCAGTGTTTCACGTACGGCATAGCCATTCGGGAACGGGCCGAAATATTCACC > NC_000913/1992168‑1992354
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| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 2 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
