Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I1 R1
|
1696 |
279.3 |
15874187 |
97.8% |
15524954 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
1,998,039 |
A→G |
Y124H (TAC→CAC) |
fliY ← |
putative periplasmic binding transport protein |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 1,998,039 | 0 | A | G | 99.6%
| 725.5
/ ‑5.2
| 232 | Y124H (TAC→CAC) | fliY | putative periplasmic binding transport protein |
| Reads supporting (aligned to +/- strand): ref base A (1/0); new base G (114/117); total (115/117) |
| Fisher's exact test for biased strand distribution p-value = 4.96e-01 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.37e-01 |
Only 100 of 237 total aligned reads displayed.
CCCCCACTTTTTTGCCTTTCAGATCATCGGCTGTTTTAATGGTGCCTTCGTTACCTTTTTTCACCAGCGCCTGAATACCAGAAATGGTGTACGGGGTTGAGAAATCGTATTTTTTCTTGCGCTCATCAGAAATGGTGACCTGATTAATCACCACATCAATACGTTTAGAGTCCAGCGACG > NC_000913/1997949‑1998128
|
cccACTTTTTTGCCTTTCAGATCATCGGCTGTTTTAATGGTGCCTTCGTTACCTTTTTTCACCAGCGCCTGAATACCAGAAATGGTGTGCggg < 2:5440667/93‑1 (MQ=255)
cccACTTTTTTGCCTTTCAGATCATCGGCTGTTTTAATGGTGCCTTCGTTACCTTTTTTCACCAGCGCCTGAATACCAGAAATGGTGTGCggg > 1:3057530/1‑93 (MQ=255)
cccACTTTTTTGCCTTTCAGATCATCGGCTCTTTTAATGGTGCCTTCGTTACCTTTTTTCACCAGCGCCTGAATACCAGAAATGGTGTGCggg < 1:949476/93‑1 (MQ=255)
cACTTTTTTGCCTTTCAGATCATCGGCTGTTTTAATGGTGCCTTCGTTACCTTTTTTCACCAGCGCCTGAATACCAGAAATGGTGTGCGGGGt < 2:3600493/93‑1 (MQ=255)
ttttttGCCTTTCAGATCATCGGCTGTTTTAATGGTGCCTTCGTTACCTTTTTTCACCAGCGCCTGAATACCAGAAATGGTGTGCGGGGTTga > 1:2073162/1‑93 (MQ=255)
ttttGCCTTTCAGATCATCGGCTGTTTTAATGGTGCCTTCGTTACCTTTTTTCACCAGCGCCTGAATACCAGAAATGGTGTGCGGGGTTgaga < 1:3266194/93‑1 (MQ=255)
ttGCCTTTCAGATCATCGGCTGTTTTAATGGTGCCTTCGTTACCTTTTTTCACCAGCGCCTGAATACCAGAAATGGTGTGCGGGGTTGAGaaa < 1:4810345/93‑1 (MQ=255)
tGCCTTTCAGATCATCGGCTGTTTTAATGGTGCCTTCGTTACCTTTTTTCACCAGCGCCTGAATACCAGAAATGGTGTGCGGGGTTGAGAAAt < 2:6621717/93‑1 (MQ=255)
tGCCTTTCAGATCATCGGCTGTTTTAATGGTGCCTTCGTTACCTTTTTTCACCAGCGCCTGAATACCAGAAATGGTGTGCGGGGTTGAGAAAt < 1:4008600/93‑1 (MQ=255)
gCCTTTCAGATCATCGGCTGTTTTAATGGTGCCTTCGTTACCTTTTTTCACCAGCGCCTGAATACCAGAAATGGTGTGCGGGGTTGAGAAATc < 1:4899535/93‑1 (MQ=255)
gCCTTTCAGATCATCGGCTGTTTTAATGGTGCCTTCGTTACCTTTTTTCACCAGCGCCTGAATACCAGAAATGGTGTGCGGGGTTGAGAAATc > 1:4082806/1‑93 (MQ=255)
ccTTTCAGATCATCGGCTGTTTTAATGGTGCCTTCGTTACCTTTTTTCACCAGCGCCTGAATACCAGAAATGGTGTGCGGGGTTGAGAAATCg < 1:834440/93‑1 (MQ=255)
cTTTCAGATCATCGGCTGTTTTAATGGTGCCTTCGTTACCTTTTTTCACCAGCGCCTGAATACCAGAAATGGTGTGCGGGGTTGAGAAATCGt > 2:4367174/1‑93 (MQ=255)
tttCAGATCATCGGCTGTTTTAATGGTGCCTTCGTTACCTTTTTTCACCAGCGCCTGAATACCAGAAATGGTGTGCGGGGTTGAGAAATCGTa > 2:1032376/1‑93 (MQ=255)
tttCAGATCATCGGCTGTTTTAATGGTGCCTTCGTTACCTTTTTTCACCAGCGCCTGAATACCAGAAATGGTGTGCGGGGTTGAGAAATCGTa < 2:4422220/93‑1 (MQ=255)
tttCAGATCATCGGCTGTTTTAATGGTGCCTTCGTTACCTTTTTTCACCAGCGCCTGAATACCAGAAATGGTGTGCGGGGTTGAGAAATCGTa > 2:1732634/1‑93 (MQ=255)
tttCAGATCATCGGCTGTTTTAATGGTGCCTTCGTTACCTTTTTTCACCAGCGCCTGAATACCAGAAATGGTGTGCGGGGTTGAGAAATCGTa > 1:229806/1‑93 (MQ=255)
tttCAGATCATCGGCTGTTTTAATGGTGCCTTCGTTACCTGTTTTCACCAGCGCCTGAACACCAGAAATGGTGTGCGGGGTTGAGAAATCGTa < 1:6732815/93‑1 (MQ=255)
tCAGATCATCGGCTGTTTTAATGGTGCCTTCGTTACCTTTTTTCACCAGCGCCTGAATACCAGAAATGGTGTGCGGGGTTGAGAAATCGTAtt < 2:4978460/93‑1 (MQ=255)
aGATCATCGGCTGTTTTAATGGTGCCTTCGTTACCTTTTTTCACCAGCGCCTGAATACCAGAAATGGTGTGCGGGGTTGAGAAATCGTAtttt > 1:3843815/1‑93 (MQ=255)
aGATCATCGGCTGTTTTAATGGTGACTTCGTTACCTTTTTTCACCAGCGCCTGAATACCAGAAATGGTGTGCGGGGTTGAGAAATCGTAtttt < 2:2507337/93‑1 (MQ=255)
tcatcGGCTGTTTTAATGGTGCCTTCGTTACCTTTTTTCACCAGCGCCTGAATACCAGAAATGGTGTGCGGGGTTGAGAAATCGTATTTTTTc > 1:1145953/1‑93 (MQ=255)
catcGGCTGTTTTAATGGTGCCTTCGTTACCTTTTTTCACCAGCGCCTGAATACCAGAAATGGTGTGCGGGGTTGAGAAATCGTATTTTTTCt < 1:6203921/93‑1 (MQ=255)
atcGGCTGTTTTAATGGTGCCTTCGTTACCTTTTTTCACCAGCGCCTGAATACCAGAAATGGTGTGCGGGGTTGAGAAATCGTATTTTTTCtt < 1:5095921/93‑1 (MQ=255)
tcGGCTGTTTTAATGGTGCCTTCGTTACCTTTTTTCACCAGCGCCTGAATACCAGAAATGGTGTGCGGGGTTGAGAAATCGTATTTTTTCTTg < 2:2136462/93‑1 (MQ=255)
tcGGCTGTTTTAATGGTGCCTTCGTTACCTTTTTTCACCAGCGCCTGAATACCAGAAATGGTGTGCGGGGTTGAGAAATCGTATTTTTTCTTg > 2:5570464/1‑93 (MQ=255)
cGGCTGTTTTAATGGTGCCTTCGTTACCTTTTTTCACCAGCGCCTGAATACCAGAAATGGTGTGCGGGGTTGAGAAATCGTATTTTTTCTTgc < 1:1810949/93‑1 (MQ=255)
cGGCTGTTTTAATGGTGCCTTCGTTACCTTTTTTCACCAGCGCCTGAATACCAGAAATGGTGTGCGGGGTTGAGAAATCGTATTTTTTCTTgc < 1:6170859/93‑1 (MQ=255)
cGGCTGTTTTAATGGTGCCTTCGTTACCTTTTTTCACCAGCGCCTGAATACCAGAAATGGTGTGCGGGGTTGAGAAATCGTATTTTTTCTTgc < 1:5804391/93‑1 (MQ=255)
cTGTTTTAATGGTGCCTTCGTTACCTTTTTTCACCAGCGCCTGAATACCAGAAATGGTGTGCGGGGTTGAGAAATCGTATTTTTTCTTGCGCt < 2:1934172/93‑1 (MQ=255)
cTGTTTTAATGGTGCCTTCGTTACCTTTTTTCACCAGCGCCTGAATACCAGAAATGGTGTGCGGGGTTGAGAAATCGTATTTTTTCTTGCGCt > 2:845814/1‑93 (MQ=255)
tGTTTTAATGGTGCCTTCGTTACCTTTTTTCACCAGCGCCTGAATACCAGAAATGGTGTGCGGGGTTGAGAAATCGTATTTTTTCTTGCGCtc > 1:416569/1‑93 (MQ=255)
tGTTTTAATGGTGCCTTCGTTACCTTTTTTCACCAGCGCCTGAATACCAGAAATGGTGTGCGGGGTTGAGAAATCGTATTTTTTCTTGCGCtc > 1:2185783/1‑93 (MQ=255)
gTTTTAATGGTGCCTTCGTTACCTTTTTTCACCAGCGCCTGAATACCAGAAATGGTGTGCGGGGTTGAGAAATCGTATTTTTTCTTGCGCtca > 1:556056/1‑93 (MQ=255)
ttttAATGGTGCCTTCGTTACCTTTTTTCACCAGCGCCTGAATACCAGAAATGGTGTGCGGGGTTGAGAAATCGTATTTTTTCTTGCGCtcat > 2:1640964/1‑93 (MQ=255)
ttttAATGGTGCCTTCGTTACCTTTTTTCACCAGCGCCTGAATACCAGAAATGGTGTGCGGGGTTGAGAAATCGTATTTTTTCTTGCGCtcat < 2:7355273/93‑1 (MQ=255)
tttAATGGTGCCTTCGTTACCTTTTTTCACCAGCGCCTGAATACCAGAAATGGTGTGCGGGGTTGAGAAATCGTATTTTTTCTTGCGCtcatc > 1:1301947/1‑93 (MQ=255)
tGGTGCCTTCGTTACCTTTTTTCACCAGCGCCTGAATACCAGAAATGGTGTGCGGGGTTGAGAAATCGTATTTTTTCTTGCGCTCATCAGaaa > 2:608758/1‑93 (MQ=255)
gTGCCTTCGTTACCTTTTTTCACCAGCGCCTGAATACCAGAAATGGTGTGCGGGGTTGAGAAATCGTATTTTTTCTTGCGCTCATCAGAAATg < 1:5584922/93‑1 (MQ=255)
gTGCCTTCGTTACCTTTTTTCACCAGCGCCTGAATACCAGAAATGGTGTGCGGGGTTGAGAAATCGTATTTTTTCTTGCGCTCATCAGAAATg < 2:5792113/93‑1 (MQ=255)
gTGCCTTCGTTACCTTTTTTCACCAGCGCCTGAATACCAGAAATGGTGTGCGGGGTTGAGAAATCGTATTTTTTCTTGCGCTCATCAGAAATg < 1:3756782/93‑1 (MQ=255)
tGCCTTCGTTACCTTTTTTCACCAGCGCCTGAATACCAGAAATGGTGTGCGGGGTTGAGAAATCGTATTTTTTCTTGCGCTCATCAGAAATgg < 1:6530021/93‑1 (MQ=255)
tGCCTTCGTTACCTTTTTTCACCAGCGCCTGAATACCAGAAATGGTGTGCGGGGTTGAGAAATCGTATTTTTTCTTGCGCTCATCAGAAATgg < 1:6929333/93‑1 (MQ=255)
ccTTCGTTACCTTTTTTCACCAGCGCCTGAATACCAGAAATGGTGTGCGGGGTTGAGAAATCGTATTTTTTCTTGCGCTCATCAGAAATGGTg > 1:4491115/1‑93 (MQ=255)
cTTCGTTACCTTTTTTCACCAGCGCCTGAATACCAGAAATGGTGTGCGGGGTTGAGAAATCGTATTTTTTCTTGCGCTCATCAGAAATGGTGa > 1:174925/1‑93 (MQ=255)
ttCGTTACCTTTTTTCACCAGCGCCTGAATACCAGAAATGGTGTGCGGGGTTGAGAAATCGTATTTTTTCTTGCGCTCATCAGAAATGGTGAc < 2:4870785/93‑1 (MQ=255)
gTTACCTTTTTTCACCAGCGCCTGAATACCAGAAATGGTGTGCGGGGTTGAGAAATCGTATTTTTTCTTGCGCTCATCAGAAATGGTGACCTg > 1:601074/1‑93 (MQ=255)
gTTACCTTTTTTCACCAGCGCCTGAATACCAGAAATGGTGTGCGGGGTTGAGAAATCGTATTTTTTCTTGCGCTCATCAGAAATGGTGACCTg < 1:5405802/93‑1 (MQ=255)
gTTACCTTTTTTCACCAGCGCCTGAATACCAGAAATGGTGTGCGGGGTTGAGAAATCGTATTTTTTCTTGCGCTCATCAGAAATGGTGACCTg > 1:7216061/1‑93 (MQ=255)
gTTACCTTTTTTCACCAGCGCCTGAATACCAGAAATGGTGTGCGGGGTTGAGAAATCGTATTTTTTCTTGCGCTCATCAGAAATGGTGACCTg > 2:3098123/1‑93 (MQ=255)
ttACCTTTTTTCACCAGCGCCTGAATACCAGAAATGGTGTGCGGGGTTGAGAAATCGTATTTTTTCTTGCGCTCATCAGAAATGGTGACCTGa > 1:1383622/1‑93 (MQ=255)
ttACCTTTTTTCACCAGCGCCTGAATACCAGAAATGGTGTGCGGGGTTGAGAAATCGTATTTTTTCTTGCGCTCATCAGAAATGGTGACCTGa > 2:7481789/1‑93 (MQ=255)
ttACCTTTTTTCACCAGCGCCTGAATACCAGAAATGGTGTGCGGGGTTGAGAAATCGTATTTTTTCTTGCGCTCATCAGAAATGGTGACCTGa < 2:3136013/93‑1 (MQ=255)
tACCTTTTTTCACCAGCGCCTGAATACCAGAAATGGTGTGCGGGGTTGAGAAATCGTATTTTTTCTTGCGCTCATCAGAAATGGTGACCTGAt > 2:7236295/1‑93 (MQ=255)
tACCTTTTTTCACCAGCGCCTGAATACCAGAAATGGTGTGCGGGGTTGAGAAATCGTATTTTTTCTTGCGCTCATCAGAAATGGTGACCTGAt > 1:7764763/1‑93 (MQ=255)
aCCTTTTTTCACCAGCGCCTGAATACCAGAAATGGTGTGCGGGGTTGAGAAATCGTATTTTTTCTTGCGCTCATCAGAAATGGTGACCTGAtt < 2:7836315/93‑1 (MQ=255)
ccTTTTTTCACCAGCGCCTGAATACCAGAAATGGTGTGCGGGGTTGAGAAATCGTATTTTTTCTTGCGCTCATCAGAAATGGTGACCTGATTa > 2:6057887/1‑93 (MQ=255)
ccTTTTTTCACCAGCGCCTGAATACCAGAAATGGTGTGCGGGGTTGAGAAATCGTATTTTTTCTTGCGCTCATCAGAAATGGTGACCTGATTa < 2:3234947/93‑1 (MQ=255)
cTTTTTTCACCAGCGCCTGAATACCAGAAATGGTGTGCGGGGTTGAGAAATCGTATTTTTTCTTGCGCTCATCAGAAATGGTGACCTGATTaa > 2:7112162/1‑93 (MQ=255)
ttttttCACCAGCGCCTGAATACCAGAAATGGTGTGCGGGGTTGAGAAATCGTATTTTTTCTTGCGCTCATCAGAAATGGTGACCTGATTAAt > 1:1613507/1‑93 (MQ=255)
ttttttCACCAGCGCCTGAATACCAGAAATGGTGTGCGGGGTTGAGAAATCGTATTTTTTCTTGCGCTCATCAGAAATGGTGACCTGATTAAt > 1:3498670/1‑93 (MQ=255)
ttttCACCAGCGCCTGAATACCAGAAATGGTGTGCGGGGTTGAGAAATCGTATTTTTTCTTGCGCTCATCAGAAATGGTGACCTGATTAATca > 1:5526818/1‑93 (MQ=255)
tgttCACCAGCGCCTGAGTACCATAAATGGTGTGCGGGGTTGAGAAATCTTGTTTTTTCTTGTGGTCATCAGAAATGGTGACCTGATTAATca < 1:2967462/91‑1 (MQ=255)
tCACCAGCGCCTGAATACCAGAAATGGTGTGCGGGGTTGAGAAATCGTATTTTTTCTTGCGCTCATCAGAAATGGTGACCTGATTAATcacca < 2:1668829/93‑1 (MQ=255)
cACCAGCGCCTGAATACCAGAAATGGTGTGCGGGGTTGAGAAATCGTATTTTTTCTTGCGCTCATCAGAAATGGTGACCTGATTAATcaccac < 1:2474458/93‑1 (MQ=255)
cACCAGCGCCTGAATACCAGAAATGGTGTGCGGGGTTGAGAAATCGTATTTTTTCTTGCGCTCATCAGAAATGGTGACCTGATTAATcaccac < 1:6964244/93‑1 (MQ=255)
cACCAGCGCCTGAATACCAGAAATGGTGTGCGGGGTTGAGAAATCGTATTTTTTCTTGCGCTCATCAGAAATGGTGACCTGATTAATcaccac > 1:7559582/1‑93 (MQ=255)
aCCAGCGCCTGAATACCAGAAATGGTGTGCGGGGTTGAGAAATCGTATTTTTTCTTGCGCTCATCAGAAATGGTGACCTGATTAATCACcaca > 2:3804126/1‑93 (MQ=255)
cAGCGCCTGAATACCAGAAATGGTGTGCGGGGTTGAGAAATCGTATTTTTTCTTGCGCTCATCAGAAATGGTGACCTGATTAATCACCACATc > 2:2234355/1‑93 (MQ=255)
gcgcCTGAATACCAGAAATGGTGTGCGGGGTTGAGAAATCGTATTTTTTCTTGCGCTCATCAGAAATGGTGACCTGATTAATCACCACATCaa < 1:861569/93‑1 (MQ=255)
acgcCTGAATACCAGAAATGGTGAGCGGGGTTGAGAAATCGTATTTTTTCTTGCGCTCATCAGAAATGGTGACCTGATTAATCACCACATCaa < 2:5667871/92‑1 (MQ=255)
cgcCTGAATACCAGAAATGGTGTGCGGGGTTGAGAAATCGTATTTTTTCTTGCGCTCATCAGAAATGGTGACCTGATTAATCACCACATCAAt < 1:4383515/93‑1 (MQ=255)
gcCTGAATACCAGAAATGGTGTGCGGGGTTGAGAAATCGTATTTTTTCTTGCGCTCATCAGAAATGGTGACCTGATTAATCACCACATCAATa > 1:846810/1‑93 (MQ=255)
gcCTGAATACCAGAAATGGTGTGCGGGGTTGAGAAATCGTATTTTTTCTTGCGCTCATCAGAAATGGTGACCTGATTAATCACCACATCAATa < 1:5287050/93‑1 (MQ=255)
ccTGAATACCAGAAATGGTGTGCGGGGTTGAGAAATCGTATTTTTTCTTGCGCTCATCAGAAATGGTGACCTGATTAATCACCACATCAATAc < 1:6246920/93‑1 (MQ=255)
ccTGAATACCAGAAATGGTGTGCGGGGTTGAGAAATCGTATTTTTTCTTGCGCTCATCAGAAATGGTGACCTGATTAATCACCACATCAATAc < 1:1945197/93‑1 (MQ=255)
tGAATACCAGAAATGGTGTGCGGGGTTGAGAAATCGTATTTTTTCTTGCGCTCATCAGAAATGGTGACCTGATTAATCACCACATCAATACGt > 1:3955806/1‑93 (MQ=255)
gAATACCAGACATGGCGTGCGGGGTTGAGAAATCGCATTTTTTCTTGCGCTCATCTGAAATGGTGACCTGATTAATAACCACATCAATACGtt > 2:6270529/1‑93 (MQ=255)
aaTACCAGAAATGGTGTGCGGGGTTGAGAAATCGTATTTTTTCTTGCGCTCATCAGAAATGGTGACCTGATTAATCACCACATCAATACGttt < 2:7653227/93‑1 (MQ=255)
aTACCAGAAATGGTGTGCGGGGTTGAGAAATCGTATTTTTTCTTGCGCTCATCAGAAATGGTGACCTGATTAATCACCACATCAATACGTTTa < 1:2154369/93‑1 (MQ=255)
aTACCAGAAATGGTGTGCGGGGTTGAGAAATCGTATTTTTTCTTGCGCTCATCAGAAATGGTGACCTGATTAATCACCACATCAATACGTTTa < 2:5947270/93‑1 (MQ=255)
cAGAAATGGTGTGCGGGGTTGAGAAATCGTATTTTTTCTTGCGCTCATCAGAAATGGTGACCTGATTAATCACCACATCAATACGTTTAGAGt > 1:7257998/1‑93 (MQ=255)
aGAAATGGTGTGCGGGGTTGAGAAATCGTATTTTTTCTTGCGCTCATCAGAAATGGTGACCTGATTAATCACCACATCAATACGTTTAGAGTc > 2:3649127/1‑93 (MQ=255)
aGAAATGGTGTGCGGGGTTGAGAAATCGTATTTTTTCTTGCGCTCATCAGAAATGGTGACCTGATTAATCACCACATCAATACGTTTAGAGTc < 2:4680027/93‑1 (MQ=255)
aGAAATGGTGTGCGGGGTTGAGAAATCGTATTTTTTCTTGCGCTCATCAGAAATGGTGACCTGATTAATCACCACATCAATACGTTTAGAGTc < 1:2400449/93‑1 (MQ=255)
aGAAATGGTGTGCGGGGTTGAGAAATCGTATTTTTTCTTGCGCTCATCAGAAATGGTGACCTGATTAATCACCACATCAATACGTTTAGAGTc < 2:5300492/93‑1 (MQ=255)
aGAAATGGTGTGCGGGGTTGAGAAATCGTATTTTTTCTTGCGCTCATCAGAAATGGTGACCTGATTAATCACCACATCAATACGTTTAGAGTc > 1:2749801/1‑93 (MQ=255)
gAAATGGTGTGCGGGGTTGAGAAATCGTATTTTTTCTTGCGCTCATCAGAAATGGTGACCTGATTAATCACCACATCAATACGTTTAGAGTcc < 2:584743/93‑1 (MQ=255)
gAAATGGTGTGCGGGGTTGAGAAATCGTATTTTTTCTTGCGCTCATCAGAAATGGTGACCTGATTAATCACCACATCAATACGTTTAGAGTcc < 1:3118037/93‑1 (MQ=255)
gAAATGGTGTGCGGGGTTGAGAAATCGTATTTTTTCTTGCGCTCATCAGAAATGGTGACCTGATTAATCACCACATCAATACGTTTAGAGTcc > 2:4779436/1‑93 (MQ=255)
aaaTGGTGTGCGGGGTTGAGAAATCGTATTTTTTCTTGCGCTCATCAGAAATGGTGACCTGATTAATCACCACATCAATACGTTTAGAGTCCa < 2:4749152/93‑1 (MQ=255)
aaaTGGTGTGCGGGGTTGAGAAATCGTATTTTTTCTTGCGCTCATCAGAAATGGTGACCTGATTAATCACCACATCAATACGTTTAGAGTCCa < 2:1167701/93‑1 (MQ=255)
aTGGTGTGCGGGGTTGAGAAATCGTATTTTTTCTTGCGCTCATCAGAAATGGTGACCTGATTAATCACCACATCAATACGTTTAGAGTCCAGc > 2:3426955/1‑93 (MQ=255)
tGGTGTGCGGGGTTGAGAAATCGTATTTTTTCTTGCGCTCATCAGAAATGGTGACCTGATTAATCACCACATCAATACGTTTAGAGTCCAGCg < 1:6653655/93‑1 (MQ=255)
tGGTGTGCGGGGTTGAGAAATCGTATTTTTTCTTGCGCTCATCAGAAATGGTGACCTGATTAATCACCACATCAATACGTTTAGAGTCCAGCg > 1:738266/1‑93 (MQ=255)
ggTGTGCGGGGTTGAGAAATCGTATTTTTTCTTGCGCTCATCAGAAATGGTGACCTGATTAATCACCACATCAATAGGTTTAGAGTCCAGCGa < 2:4733373/93‑1 (MQ=255)
ggTGTGCGGGGTTGAGAAATCGTATTTTTTCTTGCGCTCATCAGAAATGGTGACCTGATTAATCACCACATCAATACGTTTAGAGTCCAGCGa < 1:3207477/93‑1 (MQ=255)
gtgtGCGGGGTTGAGAAATCGTATTTTTTCTTGCGCTCATCAGAAATGGTGACCTGATTAATCACCACATCAATACGTTTAGAGTCCAGCGAc < 2:1770877/93‑1 (MQ=255)
tgtgCGGGGTTGAGAAATCGTATTTTTTCTTGCGCTCATCAGAAATGGTGACCTGATTAATCACCACATCAATACGTTTAGAGTCCAGCGACg > 2:2877150/1‑93 (MQ=255)
tgtgCGGGGTTGAGAAATCGTATTTTTTCTTGCGCTCATCAGAAATGGTGACCTGATTAATCACCACATCAATACGTTTAGAGTCCAGCGACg > 2:6357134/1‑93 (MQ=255)
|
CCCCCACTTTTTTGCCTTTCAGATCATCGGCTGTTTTAATGGTGCCTTCGTTACCTTTTTTCACCAGCGCCTGAATACCAGAAATGGTGTACGGGGTTGAGAAATCGTATTTTTTCTTGCGCTCATCAGAAATGGTGACCTGATTAATCACCACATCAATACGTTTAGAGTCCAGCGACG > NC_000913/1997949‑1998128
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
CGACCCCCACTTTTTTGCCTTTCAGATCATCGGCTGTTTTAATGGTGCCTTCGTTACCTTTTTTCACCAGCGCCTGAATACCAGAAATGGTGTACGGGGTTGAGAAATCGTATTTTTTCTTGCGCTCATCAGAAATGGTGACCTGATTAATCACCACATCAATACGTTTAGAGTCCAGCGACGCCAG > NC_000913/1997946‑1998132
|
CGACCCCCACTTTTTTGCCTTTCAGATCATCGGCTGTTTTAATGGTGCCTTCGTTACCTTTTTTCACCAGCGCCTGAATACCAGAAATGGTGTG > SRR4302543.5623785/1‑94 (MQ=60)
ACCCCCACTTTTTTGCCTTTCAGATCATCGGCTGTTTTAATGGTGCCTTCGTTACCTTTTTTCACCAGCGCCTGAATACCAGAAATGGTGTGCG < SRR4302543.6882887/94‑1 (MQ=60)
ACCCCCACTTTTTTGCCTTTCAGATCATCGGCTGTTTTAATGGTGCCTTCGTTACCTTTTTTCACCAGCGCCTGAATACCAGAAATGGTGTGCG > SRR4302543.5275458/1‑94 (MQ=60)
CCCCCACTTTTTTGCCTTTCAGATCATCGGCTGTTTTAATGGTGCCTTCGTTACCTTTTTTCACCAGCGCCTGAATACCAGAAATGGTGTGCGG < SRR4302543.6635074/94‑1 (MQ=60)
CCCCACTTTTTTGCCTTTCAGATCATCGGCTGTTTTAATGGTGCCTTCGTTACCTTTTTTCACCAGCGCCTGAATACCAGAAATGGTGTGCGGG > SRR4302543.3085050/1‑94 (MQ=60)
CCCACTTTTTTGCCTTTCAGATCATCGGCTGTTTTAATGGTGCCTTCGTTACCTTTTTTCACCAGCGCCTGAATACCAGAAATGGTGTGCGGGG < SRR4302543.5817379/94‑1 (MQ=60)
CCCACTTTTTTGCCTTTCAGATCATCGGCTGTTTTAATGGTGCCTTCGTTACCTTTTTTCACCAGCGCCTGAATACCAGAAATGGTGTGCGGGG > SRR4302543.2368402/1‑94 (MQ=60)
CCCACTTTTTTGCCTTTCAGATCATCGGCTCTTTTAATGGTGCCTTCGTTACCTTTTTTCACCAGCGCCTGAATACCAGAAATGGTGTGCGGGG < SRR4302543.957768/94‑1 (MQ=60)
CACTTTTTTGCCTTTCAGATCATCGGCTGTTTTAATGGTGCCTTCGTTACCTTTTTTCACCAGCGCCTGAATACCAGAAATGGTGTGCGGGGTT > SRR4302543.4067047/1‑94 (MQ=60)
CACTTTTTTGCCTTTCAGATCATCGGCTGTTTTAATGGTGCCTTCGTTACCTTTTTTCACCAGCGCCTGAATACCAGAAATGGTGTGCGGGGTT < SRR4302543.3999040/94‑1 (MQ=60)
ACTTTTTTGCCTTTCAGATCATCGGCTGTTTTAATGGTGCCTTCGTTACCTTTTTTCACCAGCGCCTGAATACCAGAAATGGTGTGCGGGGTTG > SRR4302543.2834415/1‑94 (MQ=60)
CTTTTTTGCCTTTCAGATCATCGGCTGTTTTAATGGTGCCTTCGTTACCTTTTTTCACCAGCGCCTGAATACCAGAAATGGTGTGCGGGGTTGA > SRR4302543.2091681/1‑94 (MQ=60)
TTTTTTGCCTTTCAGATCATCGGCTGTTTTAATGGTGCCTTCGTTACCTTTTTTCACCAGCGCCTGAATACCAGAAATGGTGTGCGGGGTTGAG < SRR4302543.5546841/94‑1 (MQ=60)
TTTTTGCCTTTCAGATCATCGGCTGTTTTAATGGTGCCTTCGTTACCTTTTTTCACCAGCGCCTGAATACCAGAAATGGTGTGCGGGGTTGAGA < SRR4302543.1625/94‑1 (MQ=60)
TTTTGCCTTTCAGATCATCGGCTGTTTTAATGGTGCCTTCGTTACCTTTTTTCACCAGCGCCTGAATACCAGAAATGGTGTGCGGGGTTGAGAA < SRR4302543.3295709/94‑1 (MQ=60)
TTGCCTTTCAGATCATCGGCTGTTTTAATGGTGCCTTCGTTACCTTTTTTCACCAGCGCCTGAATACCAGAAATGGTGTGCGGGGTTGAGAAAT < SRR4302543.4854273/94‑1 (MQ=60)
TGCCTTTCAGATCATCGGCTGTTTTAATGGTGCCTTCGTTACCTTTTTTCACCAGCGCCTGAATACCAGAAATGGTGTGCGGGGTTGAGAAATC < SRR4302543.4044382/94‑1 (MQ=60)
TGCCTTTCAGATCATCGGCTGTTTTAATGGTGCCTTCGTTACCTTTTTTCACCAGCGCCTGAATACCAGAAATGGTGTGCGGGGTTGAGAAATC > SRR4302543.4119406/1‑94 (MQ=60)
GCCTTTCAGATCATCGGCTGTTTTAATGGTGCCTTCGTTACCTTTTTTCACCAGCGCCTGAATACCAGAAATGGTGTGCGGGGTTGAGAAATCG < SRR4302543.4944197/94‑1 (MQ=60)
CCTTTCAGATCATCGGCTGTTTTAATGGTGCCTTCGTTACCTTTTTTCACCAGCGCCTGAATACCAGAAATGGTGTGCGGGGTTGAGAAATCGT < SRR4302543.841804/94‑1 (MQ=60)
CTTTCAGATCATCGGCTGTTTTAATGGTGCCTTCGTTACCTTTTTTCACCAGCGCCTGAATACCAGAAATGGTGTGCGGGGTTGAGAAATCGTA > SRR4302543.231790/1‑94 (MQ=60)
CTTTCAGATCATCGGCTGTTTTAATGGTGCCTTCGTTACCTTTTTTCACCAGCGCCTGAATACCAGAAATGGTGTGCGGGGTTGAGAAATCGTA > SRR4302543.2106985/1‑94 (MQ=60)
TTTCAGATCATCGGCTGTTTTAATGGTGCCTTCGTTACCTGTTTTCACCAGCGCCTGAACACCAGAAATGGTGTGCGGGGTTGAGAAATCGTAT < SRR4302543.6796420/94‑1 (MQ=60)
TCAGATCATCGGCTGTTTTAATGGTGCCTTCGTTACCTTTTTTCACCAGCGCCTGAATACCAGAAATGGTGTGCGGGGTTGAGAAATCGTATTT < SRR4302543.866882/94‑1 (MQ=60)
CAGATCATCGGCTGTTTTAATGGTGCCTTCGTTACCTTTTTTCACCAGCGCCTGAATACCAGAAATGGTGTGCGGGGTTGAGAAATCGTATTTT > SRR4302543.3540563/1‑94 (MQ=60)
CAGATCATCGGCTGTTTTAATGGTGCCTTCGTTACCTTTTTTCACCAGCGCCTGAATACCAGAAATGGTGTGCGGGGTTGAGAAATCGTATTTT > SRR4302543.3877758/1‑94 (MQ=60)
AGATCATCGGCTGTTTTAATGGTGCCTTCGTTACCTTTTTTCACCAGCGCCTGAATACCAGAAATGGTGTGCGGGGTTGAGAAATCGTATTTTT > SRR4302543.5481444/1‑94 (MQ=60)
AGATCATCGGCTGTTTTAATGGTGCCTTCGTTACCTTTTTTCACCAGCGCCTGAATACCAGAAATGGTGTGCGGGGTTGAGAAATCGTATTTTT < SRR4302543.5113310/94‑1 (MQ=60)
AGATCATCGGCTGTTTTAATGGTGCCTTCGTTACCTTTTTTCACCAGCGCCTGAATACCAGAAATGGTGTGCGGGGTTGAGAAATCGTATTTTT < SRR4302543.124897/94‑1 (MQ=60)
ATCATCGGCTGTTTTAATGGTGCCTTCGTTACCTTTTTTCACCAGCGCCTGAATACCAGAAATGGTGTGCGGGGTTGAGAAATCGTATTTTTTC > SRR4302543.1156396/1‑94 (MQ=60)
TCATCGGCTGTTTTAATGGTGCCTTCGTTACCTTTTTTCACCAGCGCCTGAATACCAGAAATGGTGTGCGGGGTTGAGAAATCGTATTTTTTCT > SRR4302543.1836363/1‑94 (MQ=60)
TCATCGGCTGTTTTAATGGTGCCTTCGTTACCTTTTTTCACCAGCGCCTGAATACCAGAAATGGTGTGCGGGGTTGAGAAATCGTATTTTTTCT > SRR4302543.3326290/1‑94 (MQ=60)
CATCGGCTGTTTTAATGGTGCCTTCGTTACCTTTTTTCACCAGCGCCTGAATACCAGAAATGGTGTGCGGGGTTGAGAAATCGTATTTTTTCTT < SRR4302543.6262506/94‑1 (MQ=60)
ATCGGCTGTTTTAATGGTGCCTTCGTTACCTTTTTTCACCAGCGCCTGAATACCAGAAATGGTGTGCGGGGTTGAGAAATCGTATTTTTTCTTG < SRR4302543.5142073/94‑1 (MQ=60)
ATCGGCTGTTTTAATGGTGCCTTCGTTACCTTTTTTCACCAGCGCCTGAATACCAGAAATGGTGTACGGGGTTGAGAAATCGTATTTTTTCTTG > SRR4302543.6179768/1‑94 (MQ=60)
TCGGCTGTTTTAATGGTGCCTTCGTTACCTTTTTTCACCAGCGCCTGAATACCAGAAATGGTGTGCGGGGTTGAGAAATCGTATTTTTTCTTGC < SRR4302543.4524833/94‑1 (MQ=60)
CGGCTGTTTTAATGGTGCCTTCGTTACCTTTTTTCACCAGCGCCTGAATACCAGAAATGGTGTGCGGGGTTGAGAAATCGTATTTTTTCTTGCG < SRR4302543.5857181/94‑1 (MQ=60)
CGGCTGTTTTAATGGTGCCTTCGTTACCTTTTTTCACCAGCGCCTGAATACCAGAAATGGTGTGCGGGGTTGAGAAATCGTATTTTTTCTTGCG < SRR4302543.6229230/94‑1 (MQ=60)
CGGCTGTTTTAATGGTGCCTTCGTTACCTTTTTTCACCAGCGCCTGAATACCAGAAATGGTGTGCGGGGTTGAGAAATCGTATTTTTTCTTGCG < SRR4302543.1827184/94‑1 (MQ=60)
GGCTGTTTTAATGGTGCCTTCGTTACCTTTTTTCACCAGCGCCTGAATACCAGAAATGGTGTGCGGGGTTGAGAAATCGTATTTTTTCTTGCGC > SRR4302543.1932542/1‑94 (MQ=60)
CTGTTTTAATGGTGCCTTCGTTACCTTTTTTCACCAGCGCCTGAATACCAGAAATGGTGTGCGGGGTTGAGAAATCGTATTTTTTCTTGCGCTC > SRR4302543.420462/1‑94 (MQ=60)
CTGTTTTAATGGTGCCTTCGTTACCTTTTTTCACCAGCGCCTGAATACCAGAAATGGTGTGCGGGGTTGAGAAATCGTATTTTTTCTTGCGCTC > SRR4302543.2205385/1‑94 (MQ=60)
TGTTTTAATGGTGCCTTCGTTACCTTTTTTCACCAGCGCCTGAATACCAGAAATGGTGTGCGGGGTTGAGAAATCGTATTTTTTCTTGCGCTCA > SRR4302543.561160/1‑94 (MQ=60)
GTTTTAATGGTGCCTTCGTTACCTTTTTTCACCAGCGCCTGAATACCAGAAATGGTGTGCGGGGTTGAGAAATCGTATTTTTTCTTGCGCTCAT > SRR4302543.2290258/1‑94 (MQ=60)
GTTTTAATGGTGCCTTCGTTACCTTTTTTCACCAGCGCCTGAATACCAGAAATGGTGTGCGGGGTTGAGAAATCGTATTTTTTCTTGCGCTCAT < SRR4302543.6236347/94‑1 (MQ=60)
TTTTAATGGTGCCTTCGTTACCTTTTTTCACCAGCGCCTGAATACCAGAAATGGTGTGCGGGGTTGAGAAATCGTATTTTTTCTTGCGCTCATC > SRR4302543.1313512/1‑94 (MQ=60)
TTTTAATGGTGCCTTCGTTACCTTTTTTCACCAGCGCCTGAATACCAGAAATGGTGTGCGGGGTTGAGAAATCGTATTTTTTCTTGCGCTCATC > SRR4302543.1313511/1‑94 (MQ=60)
TTTAATGGTGCCTTCGTTACCTTTTTTCACCAGCGCCTGAATACCAGAAATGGTGTGCGGGGTTGAGAAATCGTATTTTTTCTTGCGCTCATCA > SRR4302543.3392449/1‑94 (MQ=60)
TTAATGGTGCCTTCGTTACCTTTTTTCACCAGCGCCTGAATACCAGAAATGGTGTGCGGGGTTGAGAAATCGTATTTTTTCTTGCGCTCATCAG < SRR4302543.4250163/94‑1 (MQ=60)
TAATGGTGCCTTCGTTACCTTTTTTCACCAGCGCCTGAATACCAGAAATGGTGTGCGGGGTTGAGAAATCGTATTTTTTCTTGCGCTCATCAGA > SRR4302543.6956216/1‑94 (MQ=60)
AATGGTGCCTTCGTTACCTTTTTTCACCAGCGCCTGAATACCAGAAATGGTGTGCGGGGTTGAGAAATCGTATTTTTTCTTGCGCTCATCAGAA < SRR4302543.3185671/94‑1 (MQ=60)
TGGTGCCTTCGTTACCTTTTTTCACCAGCGCCTGAATACCAGAAATGGTGTGCGGGGTTGAGAAATCGTATTTTTTCTTGCGCTCATCAGAAAT < SRR4302543.3946693/94‑1 (MQ=60)
GTGCCTTCGTTACCTTTTTTCACCAGCGCCTGAATACCAGAAATGGTGTGCGGGGTTGAGAAATCGTATTTTTTCTTGCGCTCATCAGAAATGG < SRR4302543.3789839/94‑1 (MQ=60)
GTGCCTTCGTTACCTTTTTTCACCAGCGCCTGAATACCAGAAATGGTGTGCGGGGTTGAGAAATCGTATTTTTTCTTGCGCTCATCAGAAATGG < SRR4302543.5635793/94‑1 (MQ=60)
TGCCTTCGTTACCTTTTTTCACCAGCGCCTGAATACCAGAAATGGTGTGCGGGGTTGAGAAATCGTATTTTTTCTTGCGCTCATCAGAAATGGT < SRR4302543.3159534/94‑1 (MQ=60)
TGCCTTCGTTACCTTTTTTCACCAGCGCCTGAATACCAGAAATGGTGTGCGGGGTTGAGAAATCGTATTTTTTCTTGCGCTCATCAGAAATGGT < SRR4302543.6994505/94‑1 (MQ=60)
TGCCTTCGTTACCTTTTTTCACCAGCGCCTGAATACCAGAAATGGTGTGCGGGGTTGAGAAATCGTATTTTTTCTTGCGCTCATCAGAAATGGT < SRR4302543.6591505/94‑1 (MQ=60)
GCCTTCGTTACCTTTTTTCACCAGCGCCTGAATACCAGAAATGGTGTGCGGGGTTGAGAAATCGTATTTTTTCTTGCGCTCATCAGAAATGGTG > SRR4302543.4531926/1‑94 (MQ=60)
CCTTCGTTACCTTTTTTCACCAGCGCCTGAATACCAGAAATGGTGTGCGGGGTTGAGAAATCGTATTTTTTCTTGCGCTCATCAGAAATGGTGA > SRR4302543.176422/1‑94 (MQ=60)
CTTCGTTACCTTTTTTCACCAGCGCCTGAATACCAGAAATGGTGTGCGGGGTTGAGAAATCGTATTTTTTCTTGCGCTCATCAGAAATGGTGAC > SRR4302543.6575626/1‑94 (MQ=60)
TTCGTTACCTTTTTTCACCAGCGCCTGAATACCAGAAATGGTGTGCGGGGTTGAGAAATCGTATTTTTTCTTGCGCTCATCAGAAATGGTGACC > SRR4302543.6091135/1‑94 (MQ=60)
CGTTACCTTTTTTCACCAGCGCCTGAATACCAGAAATGGTGTGCGGGGTTGAGAAATCGTATTTTTTCTTGCGCTCATCAGAAATGGTGACCTG > SRR4302543.471898/1‑94 (MQ=60)
CGTTACCTTTTTTCACCAGCGCCTGAATACCAGAAATGGTGTGCGGGGTTGAGAAATCGTATTTTTTCTTGCGCTCATCAGAAATGGTGACCTG > SRR4302543.540096/1‑94 (MQ=60)
CGTTACCTTTTTTCACCAGCGCCTGAATACCAGAAATGGTGTGCGGGGTTGAGAAATCGTATTTTTTCTTGCGCTCATCAGAAATGGTGACCTG > SRR4302543.606576/1‑94 (MQ=60)
CGTTACCTTTTTTCACCAGCGCCTGAATACCAGAAATGGTGTGCGGGGTTGAGAAATCGTATTTTTTCTTGCGCTCATCAGAAATGGTGACCTG > SRR4302543.1974623/1‑94 (MQ=60)
CGTTACCTTTTTTCACCAGCGCCTGAATACCAGAAATGGTGTGCGGGGTTGAGAAATCGTATTTTTTCTTGCGCTCATCAGAAATGGTGACCTG < SRR4302543.7603476/94‑1 (MQ=60)
CGTTACCTTTTTTCACCAGCGCCTGAATACCAGAAATGGTGTGCGGGGTTGAGAAATCGTATTTTTTCTTGCGCTCATCAGAAATGGTGACCTG > SRR4302543.7286005/1‑94 (MQ=60)
CGTTACCTTTTTTCACCAGCGCCTGAATACCAGAAATGGTGTGCGGGGTTGAGAAATCGTATTTTTTCTTGCGCTCATCAGAAATGGTGACCTG > SRR4302543.6736910/1‑94 (MQ=60)
GTTACCTTTTTTCACCAGCGCCTGAATACCAGAAATGGTGTGCGGGGTTGAGAAATCGTATTTTTTCTTGCGCTCATCAGAAATGGTGACCTGA < SRR4302543.3039418/94‑1 (MQ=60)
GTTACCTTTTTTCACCAGCGCCTGAATACCAGAAATGGTGTGCGGGGTTGAGAAATCGTATTTTTTCTTGCGCTCATCAGAAATGGTGACCTGA > SRR4302543.6801293/1‑94 (MQ=60)
GTTACCTTTTTTCACCAGCGCCTGAATACCAGAAATGGTGTGCGGGGTTGAGAAATCGTATTTTTTCTTGCGCTCATCAGAAATGGTGACCTGA < SRR4302543.5454942/94‑1 (MQ=60)
GTTACCTTTTTTCACCAGCGCCTGAATACCAGAAATGGTGTGCGGGGTTGAGAAATCGTATTTTTTCTTGCGCTCATCAGAAATGGTGACCTGA > SRR4302543.1396073/1‑94 (MQ=60)
TTACCTTTTTTCACCAGCGCCTGAATACCAGAAATGGTGTGCGGGGTTGAGAAATCGTATTTTTTCTTGTGCTCATCAGAAATGGTGACCTGAT > SRR4302543.887037/1‑94 (MQ=60)
TTACCTTTTTTCACCAGCGCCTGAATACCAGAAATGGTGTGCGGGGTTGAGAAATCGTATTTTTTCTTGCGCTCATCAGAAATGGTGACCTGAT > SRR4302543.7838034/1‑94 (MQ=60)
TTACCTTTTTTCACCAGCGCCTGAATACCAGAAATGGTGTGCGGGGTTGAGAAATCGTATTTTTTCTTGCGCTCATCAGAAATGGTGACCTGAT < SRR4302543.4168042/94‑1 (MQ=60)
TACCTTTTTTCACCAGCGCCTGAATACCAGAAATGGTGTGCGGGGTTGAGAAATCGTATTTTTTCTTGCGCTCATCAGAAATGGTGACCTGATT > SRR4302543.6512797/1‑94 (MQ=60)
CTTTTTTCACCAGCGCCTGAATACCAGACATGGTGTGCGGGGTTGAGAAATCGTATTTTTTCTTGCGCTCATCAGAAATAGTGACCTGATTAAT > SRR4302543.2965274/1‑94 (MQ=60)
CTTTTTTCACCAGCGCCTGAATACCAGAAATGGTGTGCGGGGTTGAGAAATCGTATTTTTTCTTGCGCTCATCCGAAATGGCGACCTGATTAAT > SRR4302543.4566493/1‑94 (MQ=60)
CTTTTTTCACCAGCGCCTGAATACCAGAAATGGTGTGCGGGGTTGAGAAATCGTATTTTTTCTTGCGCTCATCAGAAATGGTGACCTGATTAAT > SRR4302543.1627894/1‑94 (MQ=60)
CTTTTTTCACCAGCGCCTGAATACCAGAAATGGTGTGCGGGGTTGAGAAATCGTATTTTTTCTTGCGCTCATCAGAAATGGTGACCTGATTAAT > SRR4302543.3529967/1‑94 (MQ=60)
CTTTTTTCACCAGCGCCTGAATACCAGAAATGGTGTGCGGGGTTGAGAAATCGTATTTTTTCTTGCGCTCATCAGAAATGGTGACCTGATTAAT > SRR4302543.2462834/1‑94 (MQ=60)
TTTTTTCACCAGCGCCTGAATACCAGAAATGGTGTGCGGGGTTGAGAAATCGTATTTTTTCTTGCGCTCATCAGAAATGGTGACCTGATTAATC > SRR4302543.5589396/1‑94 (MQ=60)
TTTTTCACCAGCGCCTGAATACCAGAAATGGTGTGCGGGGTTGAGAAATCGTATTTTTTCTTGCGCTCATCAGAAATGGTGACCTGATTAATCA > SRR4302543.5577016/1‑94 (MQ=60)
TGTTCACCAGCGCCTGAGTACCATAAATGGTGTGCGGGGTTGAGAAATCTTGTTTTTTCTTGTGGTCATCAGAAATGGTGACCTGATTAATCAC < SRR4302543.2994410/94‑1 (MQ=60)
TTTCACCAGCGCCTGAATACCAGAAATGGTGTGCGGGGTTGAGAAATCGTATTTTTTCTTGCGCTCATCAGAAATGGTGACCTGATTAATCACC > SRR4302543.7629342/1‑94 (MQ=60)
TCACCAGCGCCTGAATACCAGAAATGGTGTGCGGGGTTGAGAAATCGTATTTTTTCTTGCGCTCATCAGAAATGGTGACCTGATTAATCACCAC > SRR4302543.7169977/1‑94 (MQ=60)
TCACCAGCGCCTGAATACCAGAAATGGTGTGCGGGGTTGAGAAATCGTATTTTTTCTTGCGCTCATCAGAAATGGTGACCTGATTAATCACCAC > SRR4302543.7631548/1‑94 (MQ=60)
TCACCAGCGCCTGAATACCAGAAATGGTGTGCGGGGTTGAGAAATCGTATTTTTTCTTGCGCTCATCAGAAATGGTGACCTGATTAATAACCAC > SRR4302543.7169976/1‑94 (MQ=60)
CACCAGCGCCTGAATACCAGAAATGGTGTGCGGGGTTGAGAAATCGTATTTTTTCTTGCGCTCATCAGAAATGGTGACCTGATTAATCACCACA < SRR4302543.2496824/94‑1 (MQ=60)
CACCAGCGCCTGAATACCAGAAATGGTGTGCGGGGTTGAGAAATCGTATTTTTTCTTGCGCTCATCAGAAATGGTGACCTGATTAATCACCACA < SRR4302543.7029780/94‑1 (MQ=60)
CACCAGCGCCTGAATACCAGAAATGGTGTGCGGGGTTGAGAAATCGTATTTTTTCTTGCGCTCATCAGAAATGGTGACCTGATTAATCACCACA > SRR4302543.4196188/1‑94 (MQ=60)
CAGCGCCTGAATACCAGAAATGGTGTGCGGGGTTGAGAAATCGTATTTTTTCTTGCGCTCATCAGAAATGGTGACCTGATTAATCACCACATCA < SRR4302543.3895964/94‑1 (MQ=60)
CAGCGCCTGAATACCAGAAATGGTGTGCGGGGTTGAGAAATCGTATTTTTTCTTGCGCTCATCAGAAATGGTGACCTGATTAATCACCACATCA > SRR4302543.2200002/1‑94 (MQ=60)
CAGCGCCTGAATACCAGAAATGGTGTGCGGGGTTGAGAAATCGTATTTTTTCTTGCGCTCATCAGAAATGGTGACCTGATTAATCACCACATCA > SRR4302543.3252665/1‑94 (MQ=60)
CAGCGCCTGAATACCAGAAATGGTGTGCGGGGTTGAGAAATCGTATTTTTTCTTGCGCTCATCAGAAATGGTGACCTGATTAATCACCACATCA < SRR4302543.4904312/94‑1 (MQ=60)
GCGCCTGAATACCAGAAATGGTGTGCGGGGTTGAGAAATCGTATTTTTTCTTGCGCTCATCAGAAATGGTGACCTGATTAATCACCACATCAAT < SRR4302543.1653540/94‑1 (MQ=60)
GCGCCTGAATACCAGAAATGGTGTGCGGGGTTGAGAAATCGTATTTTTTCTTGCGCTCATCAGAAATGGTGACCTGATTAATCACCACATCAAT < SRR4302543.869249/94‑1 (MQ=60)
CGCCTGAATACCAGAAATGGTGTGCGGGGTTGAGAAATCGTATTTTTTCTTGCGCTCATCAGAAATGGTGACCTGATTAATCACCACATCAATA > SRR4302543.3124370/1‑94 (MQ=60)
CGCCTGAATACCAGAAATGGTGTGCGGGGTTGAGAAATCGTATTTTTTCTTGCGCTCATCAGAAATGGTGACCTGATTAATCACCACATCAATA > SRR4302543.854314/1‑94 (MQ=60)
CGCCTGAATACCAGAAATGGTGTGCGGGGTTGAGAAATCGTATTTTTTCTTGCGCTCATCAGAAATGGTGACCTGATTAATCACCACATCAATA > SRR4302543.854315/1‑94 (MQ=60)
CGCCTGAATACCAGAAATGGTGTGCGGGGTTGAGAAATCGTATTTTTTCTTGCGCTCATCAGAAATGGTGACCTGATTAATCACCACATCAATA > SRR4302543.854316/1‑94 (MQ=60)
CGCCTGAATACCAGAAATGGTGTGCGGGGTTGAGAAATCGTATTTTTTCTTGCGCTCATCAGAAATGGTGACCTGATTAATCACCACATCAATA < SRR4302543.4423256/94‑1 (MQ=60)
GCCTGAATACCAGAAATGGTGTGCGGGGTTGAGAAATCGTATTTTTTCTTGCGCTCATCAGAAATGGTGACCTGATTAATCACCACATCAATAC < SRR4302543.2693594/94‑1 (MQ=60)
GCCTGAATACCAGAAATGGTGTGCGGGGTTGAGAAATCGTATTTTTTCTTGCGCTCATCAGAAATGGTGACCTGATTAATCACCACATCAATAC < SRR4302543.969172/94‑1 (MQ=60)
GCCTGAATACCAGAAATGGTGTGCGGGGTTGAGAAATCGTATTTTTTCTTGCGCTCATCAGAAATGGTGACCTGATTAATCACCACATCAATAC < SRR4302543.5334773/94‑1 (MQ=60)
CCTGAATACCAGAAATGGTGTGCGGGGTTGAGAAATCGTATTTTTTCTTGCGCTCATCAGAAATGGTGACCTGATTAATCACCACATCAATACG < SRR4302543.5631388/94‑1 (MQ=60)
CCTGAATACCAGAAATGGTGTGCGGGGTTGAGAAATCGTATTTTTTCTTGCGCTCATCAGAAATGGTGACCTGATTAATCACCACATCAATACG < SRR4302543.6305850/94‑1 (MQ=60)
CCTGAATACCAGAAATGGTGTGCGGGGTTGAGAAATCGTATTTTTTCTTGCGCTCATCAGAAATGGTGACCTGATTAATCACCACATCAATACG < SRR4302543.1962664/94‑1 (MQ=60)
CCTGAATACCAGAAATGGTGTGCGGGGTTGAGAAATCGTATTTTTTCTTGCGCTCATCAGAAATGGTGACCTGATTAATCACCACATCAATACG > SRR4302543.770648/1‑94 (MQ=60)
CTGAATACCAGAAATGGTGTGCGGGGTTGAGAAATCGTATTTTTTCTTGCGCTCATCAGAAATGGTGACCTGATTAATCACCACATCAATACGT > SRR4302543.3990814/1‑94 (MQ=60)
CTGAATACCAGAAATGGTGTGCGGGGTTGAGAAATCGTATTTTTTCTTGCGCTCATCAGAAATGGTGACCTGATTAATCACCACATCAATACGT > SRR4302543.7886308/1‑94 (MQ=60)
CTGAATACCAGAAATGGTGTGCGGGGTTGAGAAATCGTATTTTTTCTTGCGCTCATCAGAAATGGTGACCTGATTAATCACCACATCAATACGT > SRR4302543.7295589/1‑94 (MQ=60)
GAATACCAGAAATGGTGTGCGGGGTTGAGAAATCGTATTTTTTCTTGCGCTCATCAGAAATGGTGACCTGATTAATCACCACATCAATACGTTT > SRR4302543.7338797/1‑94 (MQ=60)
ATACCAGAAATGGTGTGCGGGGTTGAGAAATCGTATTTTTTCTTGCGCTCATCAGAAATGGTGACCTGATTAATCACCACATCAATACGTTTAG < SRR4302543.2173664/94‑1 (MQ=60)
ACCAGAAATGGTGTGCGGGGTTGAGAAATCGTATTTTTTCTTGCGCTCATCAGAAATGGTGACCTGATTAATCACCACATCAATACGTTTAGAG < SRR4302543.1007433/94‑1 (MQ=60)
ACCAGAAATGGTGTGCGGGGTTGAGAAATCGTATTTTTTCTTGCGCTCATCAGAAATGGTGACCTGATTAATCACCACATCAATACGTTTAGAG < SRR4302543.5840435/94‑1 (MQ=60)
ACCAGAAATGGTGTGCGGGGTTGAGAAATCGTATTTTTTCTTGCGCTCATCAGAAATGGTGACCTGATTAATCACCACATCAATACGTTTAGAG > SRR4302543.5864635/1‑94 (MQ=60)
ACCAGAAATGGTGTGCGGGGTTGAGAAATCGTATTTTTTCTTGCGCTCATCAGAAATGGTGACCTGATTAATCACCACATCAATACGTTTAGAG < SRR4302543.2186592/94‑1 (MQ=60)
CCAGAAATGGTGTGCGGGGTTGAGAAATCGTATTTTTTCTTGCGCTCATCAGAAATGGTGACCTGATTAATCACCACATCAATACGTTTAGAGT > SRR4302543.7328151/1‑94 (MQ=60)
CAGAAATGGTGTGCGGGGTTGAGAAATCGTATTTTTTCTTGCGCTCATCAGAAATGGTGACCTGATTAATCACCACATCAATACGTTTAGAGTC > SRR4302543.2774811/1‑94 (MQ=60)
AGAAATGGTGTGCGGGGTTGAGAAATCGTATTTTTTCTTGCGCTCATCAGAAATGGTGACCTGATTAATCACCACATCAATACGTTTAGAGTCC < SRR4302543.6998728/94‑1 (MQ=60)
AGAAATGGTGTGCGGGGTTGAGAAATCGTATTTTTTCTTGCGCTCATCAGAAATGGTGACCTGATTAATCACCACATCAATACGTTTAGAGTCC < SRR4302543.2422155/94‑1 (MQ=60)
GAAATGGTGTGCGGGGTTGAGAAATCGTATTTTTTCTTGCGCTCATCAGAAATGGTGACCTGATTAATCACCACATCAATACGTTTAGAGTCCA < SRR4302543.6288338/94‑1 (MQ=60)
GAAATGGTGTGCGGGGTTGAGAAATCGTATTTTTTCTTGCGCTCATCAGAAATGGTGACCTGATTAATCACCACATCAATACGTTTAGAGTCCA < SRR4302543.3146082/94‑1 (MQ=60)
AAATGGTGTGCGGGGTTGAGAAATCGTATTTTTTCTTGCGCTCATCAGAAATGGTGACCTGATTAATCACCACATCAATACGTTTAGAGTCCAG < SRR4302543.3823136/94‑1 (MQ=60)
AAATGGTGTGCGGGGTTGAGAAATCGTATTTTTTCTTGCGCTCATCAGAAATGGTGACCTGATTAATCACCACATCAATACGTTTAGAGTCCAG < SRR4302543.1826421/94‑1 (MQ=60)
AATGGTGTGCGGGGTTGAGAAATCGTATTTTTTCTTGCGCTCATCAGAAATGGTGACCTGATTAATCACCACATCAATACGTTTAGAGTCCAGC < SRR4302543.2396789/94‑1 (MQ=60)
ATGGTGTGCGGGGTTGAGAAATCGTATTTTTTCTTGCGCTCATCAGAAATGGTGACCTGATTAATCACCACATCAATACGTTTAGAGTCCAGCG > SRR4302543.744872/1‑94 (MQ=60)
TGGTGTGCGGGGTTGAGAAATCGTATTTTTTCTTGCGCTCATCAGAAATGGTGACCTGATTAATCACCACATCAATACGTTTAGAGTCCAGCGA < SRR4302543.6716471/94‑1 (MQ=60)
GGTGTGCGGGGTTGAGAAATCGTATTTTTTCTTGCGCTCATCAGAAATGGTGACCTGATTAATCACCACATCAATACGTTTAGAGTCCAGCGAC < SRR4302543.3236422/94‑1 (MQ=60)
GGTGTGCGGGGTTGAGAAATCGTATTTTTTCTTGCGCTCATCAGAAATGGTGACCTGATTAATCACCACATCAATACGTTTAGAGTCCAGCGAC > SRR4302543.144671/1‑94 (MQ=60)
GTGTGCGGGGTTGAGAAATCGTATTTTTTCTTGCGCTCATCAGAAATGGTGACCTGATTAATCACCACATCAATACGTTTAGAGTCCAGCGACG < SRR4302543.509275/94‑1 (MQ=60)
TGTGCGGGGTTGAGAAATCGTATTTTTTCTTGCGCTCATCAGAAATGGTGACCTGATTAATCACCACATCAATACGTTTAGAGTCCAGCGACGC > SRR4302543.3260543/1‑94 (MQ=60)
TGTGCGGGGTTGAGAAATCGTATTTTTTCTTGCGCTCATCAGAAATGGGGACCTGATTAATCACCACATCAATACGTTTACAGTCCAGCGACGC > SRR4302543.3260541/1‑94 (MQ=60)
GCGGGGTTGAGAAATCGTATTTTTTCTTGCGCTCATCAGAAATGGTGACCTGATTAATCACCACATCAATACGTTTAGAGTCCAGCGACGCCAG < SRR4302543.4610394/94‑1 (MQ=60)
|
CGACCCCCACTTTTTTGCCTTTCAGATCATCGGCTGTTTTAATGGTGCCTTCGTTACCTTTTTTCACCAGCGCCTGAATACCAGAAATGGTGTACGGGGTTGAGAAATCGTATTTTTTCTTGCGCTCATCAGAAATGGTGACCTGATTAATCACCACATCAATACGTTTAGAGTCCAGCGACGCCAG > NC_000913/1997946‑1998132
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| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
