Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I1 R1
|
1696 |
279.3 |
15874187 |
97.8% |
15524954 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
2,069,029 |
T→C |
S169S (AGT→AGC) |
yeeP → |
putative histone |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 2,069,029 | 0 | T | C | 100.0%
| 596.8
/ NA
| 191 | S169S (AGT→AGC) | yeeP | putative histone |
| Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (89/102); total (89/102) |
Only 100 of 204 total aligned reads displayed.
TCCGGTTGTGGCCGTATCGGCCCGCACCGGCTGGGAACTGGATACGCTGGTCAGTGCGCTCATGACAGCGCTTCCCGACCATGCCGCCAGTCCCCTGATGACCCGACTGCAGGACGAGCTGCGCACGGAATCTGTCCGGTCTCAGGCCCGTGAACAGTTTACCGGTGCGGTGGACCGGAT > NC_000913/2068939‑2069118
|
ggTTGTGGCCGTATCGGCCCGCACCGGCTGGGAACTGGATACGCTGGTCAGTGCGCTCATGACAGCGCTTCCCGACCATGCCGCCAGCCCCCt < 2:5795720/93‑1 (MQ=255)
ggTTGTGGCCGTATCGGCCCGCACCGGCTGGGAACTGGATACGCTGGTCAGGGCGCTCATGACAGCGCTTCCCGACCATGCCGCCAGCCCCCt > 1:7002597/1‑93 (MQ=255)
ttGGGGCAGTATCTGCCCGCACCGGCTGGGAACGGGATACGCTGGTCAGTGCGCTCATGACCGCTCTTCCCGACCATGCCGCCAGCCCCCtga < 2:5287006/93‑1 (MQ=255)
tggtgGCTGAATCGGCCCGCACCGGCTGGGAACTGGATACGCTGGTCAGTGCGCTTATGTCAGCGCTTCCCGTCCATGCCGCCAGTCCCCgga < 2:3667469/91‑1 (MQ=255)
tgtgGCCGTATCGGCCCGCACCGGCTGGGAACTGGATACGCTGGTCAGTGCGCTCATGACAGCGCTTCCCGACCATGCCGCCAGCCCCCtgat < 1:6649340/93‑1 (MQ=255)
tgtgGCCGTATCGGCCCGCACCGGCTGGGAACTGGATACGCTGGTCAGTGCGCTCATGACAGCGCTTCCCGACCATGCCGCCAGCCCCCtgat < 2:6574588/93‑1 (MQ=255)
gtgGCCGTATCGGCCCGCACCGGCTGGGAACTGGATACGCTGGTCAGTGCGCTCATGACAGCGCTTCCCGACCATGCCGCCAGCCCCCtgatg < 2:2209939/93‑1 (MQ=255)
tgGCCGTATCGGCCCGCACCGGCTGGGAACTGGATACGCTGGTCAGTGCGCTCATGACAGCGCTTCCCGACCATGCCGCCAGCCCCCtgatga > 1:4492850/1‑93 (MQ=255)
ggCCGTATCGGCCCGCACCGGCTGGGAACTGGATACGCTGGTCAGTGCGCTCATGACAGCGCTTCCCGACCATGCCGCCAGCCCCCTGATGAc < 2:5364954/93‑1 (MQ=255)
gCCGTATCGGCCCGCACCGGCTGGGAACTGGATACGCTGGTCAGTGCGCTCATGACAGCGCTTCCCGACCATGCCGCCAGCCCCCTGATGAcc > 2:1021016/1‑93 (MQ=255)
ccGTATCGGCCCGCACCGGCTGGGAACTGGATACGCTGGTCAGTGCGCTCATGACAGCGCTTCCCGACCATGCCGCCAGCCCCCTGATGAccc < 1:7384292/93‑1 (MQ=255)
cGTATCGGCCCGCACCGGCTGGGAACTGGATACGCTGGTCAGTGCGCTCATGACAGCGCTTCCCGACCATGCCGCCAGCCCCCTGATGACCCg > 2:5323444/1‑93 (MQ=255)
gTATCGGCCCGCACCGGCTGGGAACTGGATACGCTGGTCAGTGCGCTCATGACAGCGCTTCCCGACCATGCCGCCAGCCCCCTGATTACCCGa < 2:7677054/93‑1 (MQ=255)
gTATCGGCCCGCACCGGCTGGGAACTGGATACGCTGGTCAGTGCGCTCATGACAGCGCTTCCCGACCATGCCGCCAGCCCCCTGATGACCCGa > 2:2390404/1‑93 (MQ=255)
gTATCGGCCCGCACCGGCTGGGAACTGGATACGCTGGTCAGTGCGCTCATGACAGCGCTTCCCGACCATGCCGCCAGCCCCCTGATGACCCGa < 1:433373/93‑1 (MQ=255)
tCGGCCCGCACCGGCTGGGAACTGGATACGCTGGTCAGTGCGCTCATGACAGCGCTTCCCGACCATGCCGCCAGCCCCCTGATGACCCGACTg > 1:5198382/1‑93 (MQ=255)
ggCCCGCACCGGCTGGGAACTGGATACGCTGGTCAGTGCGCTCATGACAGCGCTTCCCGACCATGCCGCCAGCCCCCTGATGACCCGACTGCa < 1:6377514/93‑1 (MQ=255)
gCCCGCACCGGCTGGGAACTGGATACGCTGGTCAGTGCGCTCATGACAGCGCTTCCCGACCATGCCGCCAGCCCCCTGATGACCCGACTGCAg > 1:5095824/1‑93 (MQ=255)
gCCCGCACCGGCTGGGAACTGGATACGCTGGTCAGTGCGCTCATGACAGCGCTTCCCGACCATGCCGCCAGCCCCCTGATGACCCGACTGCAg < 2:506597/93‑1 (MQ=255)
gCCCGCACCGGCTGGGAACTGGATACGCTGGTCAGTGCGCTCATGACAGCGCTTCCCGACCATGCCGCCAGCCCCCTGATGACCCGACTGCAg > 2:7215958/1‑93 (MQ=255)
gCCCGCACCGGCTGGGAACTGGATACGCTGGTCAGTGCGCTCATGACAGCGCTTCCCGACCATGCCGCCAGCCCCCTGATGACCCGACTGCAg < 1:4083152/93‑1 (MQ=255)
cccGCACCGGCTGGGAACTGGATACGCTGGTCAGTGCGCTCATGACAGCGCTTCCCGACCATGCCGCCAGCCCCCTGATGACCCGACTGCAgg < 2:5948491/93‑1 (MQ=255)
cccGCACCGGCTGGGAACTGGATACGCTGGTCAGTGCGCTCATGACAGCGCTTCCCGACCATGCCGCCAGCCCCCTGATGACCCGACTGCAgg > 1:5484297/1‑93 (MQ=255)
ccGCACCGGCTGGGAACTGGATACGCTGGTCAGTGCGCTCATGACAGCGCTTCCCGACCATGCCGCCAGCCCCCTGATGACCCGACTGCAGGa > 2:1476533/1‑93 (MQ=255)
cGCACCGGCTGGGAACTGGATACGCTGGTCAGTGCGCTCATGACAGCGCTTCCCGACCATGCCGCCAGCCCCCTGATGACCCGACTGCAGGAc < 1:6814348/93‑1 (MQ=255)
cGCACCGGCTGGGAACTGGATACGCTGGTCAGTGCGCTCATGACAGCGCTTCCCGACCATGCCGCCAGCCCCCTGATGACCCGACTGCAGGAc > 1:6267099/1‑93 (MQ=255)
gCACCGGCTGGGAACTGGATACGCTGGTCAGTGCGCTCATGACAGCGCTTCCCGACCATGCCGCCAGCCCCCTGATGACCCGACTGCAGGACg > 1:3903169/1‑93 (MQ=255)
gCACCGGCTGGGAACTGGATACGCTGGTCAGTGCGCTCATGACAGCGCTTCCCGACCATGCCGCCAGCCCCCTGATGACCCGACTGCAGGACg > 2:13667/1‑93 (MQ=255)
cACCGGCTGGGAACTGGATACGCTGGTCAGTGCGCTCATGACAGCGCTTCCCGACCATGCCGCCAGCCCCCTGATGACCCGACTGCAGGACGa < 1:3589647/93‑1 (MQ=255)
aCCGGCTGGGAACTGGATACGCTGGTCAGTGCGCTCATGACAGCGCTTCCCGACCATGCCGCCAGCCCCCTGATGACCCGACTGCAGGACGAg > 2:2001801/1‑93 (MQ=255)
cTGGGAACTGGATACGCTGGTCAGTGCGCTCATGACAGCGCTTCCCGACCATGCCGCCAGCCCCCTGATGACCCGACTGCAGGACGAGCTgcg > 1:3667683/1‑93 (MQ=255)
tGGGCACTGGATACGATGGTCAGTTTGCTCATGACAGCGCTTCCCGAGCATGCCGGCAGCCCCCTGATGACCCGACTGCAGGACAAGCTtcgc > 2:2362771/1‑93 (MQ=255)
tGGGAACTGGATACGCTGGTCAGTGCGCTCATGACAGCGCTTCCCGACCATGCCGCCAGCCCCCTGATGACCCGACTGCAGGACGAGCTgcgc > 1:812883/1‑93 (MQ=255)
gggAACTGGATACGCTGGTCAGTGCGCTCATGACAGCGCTTCCCGACCATGCCGCCAGCCCCCTGATGACCCGACTGCAGGACGAGCTGCGCa > 2:3545163/1‑93 (MQ=255)
gggAACTGGATACGCTGGTCAGTGCGCTCATGACAGCGCTTCCCGACCATGCCGCCAGCCCCCTGATGACCCGACTGCAGGACGAGCAgcgcc > 1:4676394/1‑92 (MQ=255)
ggAACTGGATACGCTGGTCAGTGCGCTCATGACAGCGCTTCCCGACCATGCCGCCAGCCCCCTGATGACCCGACTGCAGGACGAGCTGCGCAc < 1:7572866/93‑1 (MQ=255)
gAACTGGATACGCTGGTCAGTGCGCTCATGACAGCGCTTCCCGACCATGCCGCCAGCCCCCTGATGACCCGACTGCAGGACGAGCTGCGCACg < 1:1485060/93‑1 (MQ=255)
aCTGGATACGCTGGTCAGTGCGCTCATGACAGCGCTTCCCGACCATGCCGCCAGCCCCCTGATGACCCGACTGCAGGACGAGCTGCGCACGGa > 1:3054075/1‑93 (MQ=255)
cTGGATACGCTGTGCAGTGCGCTCATGACAGCGCTTCCCGACCATGCCGCCAGCCCCCTGATGACCCGACTGCAGGACGAGCTGCGCACGGaa < 2:4782708/93‑1 (MQ=255)
cTGGATACGCTGGTCAGTGCGCTCATGACAGCGCTTCCCGACCATGCCGCCAGCCCCCTGATGACCCGACTGCAGGACGAGCTGCGCACGGaa > 1:2006955/1‑93 (MQ=255)
cTGGATACGCTGGTCAGTGCGCTCATGACAGCGCTTCCCGACCATGCCGCCAGCCCCCTGATGACCCGACTGCAGGACGAGCTGCGCACGGaa < 1:6984272/93‑1 (MQ=255)
gATACGCTGGTCAGTGCGCTCATGACAGCGCTTCCCGACCATGCCGCCAGCCCCCTGATGACCCGACTGCAGGACGAGCTGCGCACGGAATCt > 2:3927088/1‑93 (MQ=255)
gATACGCTGGTCAGTGCGCTCATGACAGCGCTTCCCGACCATGCCGCCAGCCCCCTGATGACCCGACTGCAGGACGAGCTGCGCACGGAATCt > 2:671903/1‑93 (MQ=255)
tACGCTGGTCAGTGCGCTCATGACAGCGCTTCCCGACCATGCCGCCAGCCCCCTGATGACCCGACTGCAGGACGAGCTGCGCACGGAATCTGt > 1:7245348/1‑93 (MQ=255)
cGCTGGTCAGTGCGCTCATGACAGCGCTTCCCGACCATGCCGCCAGCCCCCTGATGACCCGACTGCAGGACGAGCTGCGCACGGAATCTGTcc > 1:6046393/1‑93 (MQ=255)
cGCTGGTCAGTGCGCTCATGACAGCGCTTCCCGACCATGCCGCCAGCCCCCTGATGACCCGACTGCAGGACGAGCTGCGCACGGAATCTGTcc < 2:5147476/93‑1 (MQ=255)
cGCTGGTCAGTGCGCTCATGACAGCGCTTCCCGACCATGCCGCCAGCCCCCTGATGACCCGACTGCAGGACGAGCTGCGCACGGAATCTGTcc > 2:7905610/1‑93 (MQ=255)
cTGGTCAGTGCGCTCATGACAGCGCTTCCCGACCATGCCGCCAGCCCCCTGATGACCCGACTGCAGGACGAGCTGCGCACGGAATCTGTCCgg < 1:2228813/93‑1 (MQ=255)
ggTCAGTGCGCTCATGACAGCGCTTCCCGACCATGCCGCCAGCCCCCTGATGACCCGACTGCAGGACGAGCTGCGCACGGAATCTGTCCGGtc < 2:7635694/93‑1 (MQ=255)
gTCAGTGCGCTCATGACAGCGCTTCCCGACCATGCCGCCAGCCCCCTGATGACCCGACTGCAGGACGAGCTGCGCACGGAATCTGTCCGGtct > 1:2420847/1‑93 (MQ=255)
tCAGTGCGCTCATGACAGCGCTTCCCGACCATGCCGCCAGCCCCCTGATGACCCGACTGCAGGACGAGCTGCGCACGGAATCTGTCCGGtctc > 2:269153/1‑93 (MQ=255)
cAGTGCGCTCATGACAGCGCTTCCCGACCATGCCGCCAGCCCCCTGATGACCCGACTGCAGGACGAGCTGCGCACGGAATCTGTCCGGTCTCa < 2:4206483/93‑1 (MQ=255)
cAGTGCGCTCATGACAGCGCTTCCCGACCATGCCGCCAGCCCCCTGATGACCCGACTGCAGGACGAGCTGCGCACGGAATCTGTCCGGTCTCa < 2:1121976/93‑1 (MQ=255)
cAGTGCGCTCATGACAGCGCTTCCCGACCATGCCGCCAGCCCCCTGATGACCCGACTGCAGGACGAGCTGCGCACGGAATCTGTCCGGTCTCa < 1:1199023/93‑1 (MQ=255)
aGTGCGCTCATGACAGCGCTTCCCGACCATGCCGCCAGCCCCCTGATGACCCGACTGCAGGACGAGCTGCGCACGGAATCTGTCCGGTCTCAg > 1:493259/1‑93 (MQ=255)
gTGCGCTCATGACAGCGCTTCCCGACCATGCCGCCAGCCCCCTGATGACCCGACTGCAGGACGAGCTGCGCACGGAATCTGTCCGGTCTCAgg < 1:2155076/93‑1 (MQ=255)
gcTCATGACAGCGCTTCCCGACCATGCCGCCAGCCCCCTGATGACCCGACTGCAGGACGAGCTGCGCACGGAATCTGTCCGGTCTCAGGCCCg > 2:1200474/1‑93 (MQ=255)
gcTCATGACAGCGCTTCCCGACCATGCCGCCAGCCCCCTGATGACCCGACTGCAGGACGAGCTGCGCACGGAATCTGTCCGGTCTCAGGCCCg > 2:6297440/1‑93 (MQ=255)
cTCATGACAGCGCTTCCCGACCATGCCGCCAGCCCCCTGATGACCCGACTGCAGGACGAGCTGCGCACGGAATCTGTCCGGTCTCAGGCCCGt < 1:7449408/93‑1 (MQ=255)
cTCATGACAGCGCTTCCCGACCATGCCGCCAGCCCCCTGATGACCCGACTGCAGGACGAGCTGCGCACGGAATCTGTCCGGTCTCAGGCCCGt > 1:339763/1‑93 (MQ=255)
cATGACAGCGCTTCCCGACCATGCCGCCAGCCCCCTGATGACCCGACTGCAGGACGAGCTGCGCACGGAATCTGTCCGGTCTCAGGCCCGTGa > 2:6876120/1‑93 (MQ=255)
aTGACAGCGCTTCCCGACCATGCCGCCAGCCCCCTGATGACCCGACTGCAGGACGAGCTGCGCACGGAATCTGTCCGGTCTCAGGCCCGTGaa < 2:1105744/93‑1 (MQ=255)
aTGACAGCGCTTCCCGACCATGCCGCCAGCCCCCTGATGACCCGACTGCAGGACGAGCTGCGCACGGAATCTGTCCGGTCTCAGGCCCGTGaa > 1:7148203/1‑93 (MQ=255)
aTGACAGCCGTTCCCCACCATGCCGCCAGCCACCTGATGACCCGACTGCAGGAGGATCTGCGCACGGAATCTGTCCGGTCTCAGGCCCGTGaa < 2:7456752/93‑1 (MQ=255)
tGACAGCGCTTCCCGACCATGCCGCCAGCCCCCTGATGACCCGACTGCAGGACGAGCTGCGCACGGAATCTGTCCGGTCTCAGGCCCGTGAAc > 2:2836268/1‑93 (MQ=255)
tGACAGCGATTCCCGACCATGCCGCCAGCCCCCTGATGCCCCGACTGCAGGACGAGCTGCGCACGGAATCTGTCCGGTCTCAGGCCCGTGAAc > 2:7602142/1‑93 (MQ=255)
gACAGCGCTTCCCGACCATGCCGCCAGCCCCCTGATGACCCGACTGCAGGACGAGCTGCGCACGGAATCTGTCCGGTCTCAGGCCCGTGAACa < 1:3520142/93‑1 (MQ=255)
aCAGCGCTTCCCGACCATGCCGCCAGCCCCCTGATGACCCGACTGCAGGACGAGCTGCGCACGGAATCTGTCCGGTCTCAGGCCCGTGAACAg < 1:7548739/93‑1 (MQ=255)
aCAGCGCTTCCCGACCATGCCGCCAGCCCCCTGATGACCCGACTGCAGGACGAGCTGCGCACGGAATCTGTCCGGTCTCAGGCCCGTGAACAg < 2:2057133/93‑1 (MQ=255)
cAGCGCTTCCCGACCATGCCGCCAGCCCCCTGATGACCCGACTGCAGGACGAGCTGCGCACGGAATCTGTCCGGTCTCAGGCCCGTGAACAGt < 1:1145309/93‑1 (MQ=255)
cAGCGCTTCCCGACCATGCCGCCAGCCCCCTGATGACCCGACTGCAGGACGAGCTGCGCACGGAATCTGTCCGGTCTCAGGCCCGTGAACAGt < 2:2528296/93‑1 (MQ=255)
gcgcTTCCCGACCATGCCGCCATCCCCCTGATGACCCGACTGCATGACGAGCTGCGCACGGAATCTGTCCGGTCTCAGGCCCGTGAACAGttt > 1:5591904/1‑93 (MQ=255)
gcgcTTCCCGACCATGCCGCCAGCCCCCTGATGACCCGACTGCAGGACGAGCTGCGCACGGAATCTGTCCGGTCTCAGGCCCGTGAACAGttt > 2:4400804/1‑93 (MQ=255)
gcTTCCCGACCATGCCGCCAGCCCCCTGATGACCCGACTGCAGGACGAGCTGCGCACGGAATCTGTCCGGTCTCAGGCCCGTGAACAGTTTAc < 1:5282040/93‑1 (MQ=255)
gcTTCCCGACCATGCCGCCAGCCCCCTGATGACCCGACTGCAGGACGAGCTGCGCACGGAATCTGTCCGGTCTCAGGCCCGTGAACAGTTTAc < 1:6517977/93‑1 (MQ=255)
cTTCCCGACCATGCCGCCAGCCCCCTGATGACCCGACTGCAGGACGAGCTGCGCACGGAATCTGTCCGGTCTCAGGCCCGTGAACAGTTTAcc < 1:1782434/93‑1 (MQ=255)
ttCCCGACCATGCCGCCAGCCCCCTGATGACCCGACTGCAGGACGAGCTGCGCACGGAATCTGTCCGGTCTCAGGCCCGTGAACAGTTTACcg > 1:158599/1‑93 (MQ=255)
ttCCCGACCATGCCGCCAGCCCCCTGATGACCCGACTGCAGGACGAGCTGCGCACGGAATCTGTCCGGTCTCAGGCCCGTGAACAGTTTACcg > 1:3553070/1‑93 (MQ=255)
tCCCGACCATGCCGCCAGCCCCCTGATGACCCGACTGCAGGACGAGCTGCGCACGGAATCTGTCCGGTCTCAGGCCCGTGAACAGTTTACcgg > 2:4635363/1‑93 (MQ=255)
tCCCGACCATGCCGCCAGCCCCCTGATGACCCGACTGCAGGACGAGCTGCGCACGGAATCTGTCCGGTCTCAGGCCCGTGAACAGTTTACcgg > 1:2076830/1‑93 (MQ=255)
cccGACCATGCCGCCAGCCCCCTGATGACCCGACTGCAGGACGAGCTGCGCACGGAATCTGTCCGGTCTCAGGCCCGTGAACAGTTTACcggt < 2:3178601/93‑1 (MQ=255)
ccGACCCTGCCGCCAGCCCCCTGATGACCCGACTGCAGGACGAGCTGCGCACGGAATCTGTCCGGTCTCAGGCCCGTGAACAGTTTACcggtg < 1:4251090/93‑1 (MQ=255)
ccGACCATGCCGCCAGCCCCCTGATGACCCGACTGCAGGACGAGCTGCGCACGGAATCTGTCCGGTCTCAGGCCCGTGAACAGTTTACcggtg < 1:3994016/93‑1 (MQ=255)
ccGACCATGCCGCCAGCCCCCTGATGACCCGACTGCAGGACGAGCTGCGCACGGAATCTGTCCGGTCTCAGGCCCGTGAACAGTTTACcggtg < 2:7538031/93‑1 (MQ=255)
ccGACCATGCCGCCAGCCCCCTGATGACCCGACTGCAGGACGAGCTGCGCACGGAATCTGTCCGGTCTCAGGCCCGTGAACAGTTTACcggtg < 2:7317907/93‑1 (MQ=255)
cGACCATGCCGCCAGCCCCCTGATGACCCGACTGCAGGACGAGCTGCGCACGGAATCTGTCCGGTCTCAGGCCCGTGAACAGTTTACcggtgc < 1:323845/93‑1 (MQ=255)
aCCATGCCGCCAGCCCCCTGATGACCCGACTGCAGGACGAGCTGCGCACGGAATCTGTCCGGTCTCAGGCCCGTGAACAGTTTACcggtgcgg > 1:6290319/1‑93 (MQ=255)
aCCATGCCGCCAGCCCCCTGATGACCCGACTGCAGGACGAGCTGCGCACGGAATCTGTCCGGTCTCAGGCCCGTGAACAGTTTACcggtgcgg > 2:1906322/1‑93 (MQ=255)
ccATGCCGCCAGCCCCCTGATGACCCGACTGCAGGACGAGCTGCGCACGGAATCTGTCCGGTCTCAGGCCCGTGAACAGTTTACcggtgcggt < 2:1608378/93‑1 (MQ=255)
ccATGCCGCCAGCCCCCTGATGACCCGACTGCAGGACGAGCTGCGCACGGAATCTGTCCGGTCTCAGGCCCGTGAACAGTTTACcggtgcggt < 1:7329711/93‑1 (MQ=255)
cATGCCGCCAGCCCCCTGATGACCCGACTGCAGGACGAGCTGCGCACGGAATCTGTCCGGTCTCAGGCCCGTGAACAGTTTACcggtgcggtg > 2:6196549/1‑93 (MQ=255)
cATGCCGCCAGCCCCCTGATGACCCGACTGCAGGACGAGCTGCGCACGGAATCTGTCCGGTCTCAGGCCCGTGAACAGTTTACcggtgcggtg > 1:2845202/1‑93 (MQ=255)
tGCCGCCAGCCCCCTGATGACCCGACTGCAGGACGAGCTGCGCACGGAATCTGTCCGGTCTCAGGCCCGTGAACAGTTTACCGGTGCGGTGGa > 1:1946355/1‑93 (MQ=255)
tGCCCCCAGCCCCCTGATGGCCCGACTGCAGGACGAGCTGCGCACGGAATCTGTCCGGTCTCAGGCCCGTGAACAGTTTACCGGTGCGGTGGa < 2:2293104/93‑1 (MQ=255)
cgccAGCCCCCTGATGACCCGACTGCAGGACGAGCTGCGCACGGAATCTGTCCGGTCTCAGGCCCGTGAACAGTTTACCGGTGCGGTGGACCg < 1:6736382/93‑1 (MQ=255)
cgccAGCCCCCTGATGACCCGACCGCAGGACGAGCTGCGCACGGAATCTGTCCGGTCTCGGGCCCGTGAACAGTTTACCGGTGCGGTGGACCg < 2:4360733/93‑1 (MQ=255)
ccAGCCCCCTGATGACCCGACTGCAGGACGAGCTGCGCACGGAATCTGTCCGGTCTCAGGCCCGTGAACAGTTTACCGGTGCGGTGGACCGGa > 1:1284441/1‑93 (MQ=255)
ccAGCCCCCTGATGACCCGACTGCAGGACGAGCTGCGCACGGAATCTGTCCGGTCTCAGGCCCGTGAACAGTTTACCGGTGCGGTGGACCGGa > 1:2280169/1‑93 (MQ=255)
ccAGCCCCCTGATGACCCGACTGCAGGACGAGCTGCGCACGGAATCTGTCCGGTCTCAGGCCCGTGAACAGTTTACCGGTGCGGTGGACCGGa > 2:3431218/1‑93 (MQ=255)
cAGCCCCCTGATGACCCGACTGCAGGACGAGCTGCGCACGGAATCTGTCCGGTCTCAGGCCCGTGAACAGTTTACCGGTGCGGTGGACCGGat > 1:2652038/1‑93 (MQ=255)
|
TCCGGTTGTGGCCGTATCGGCCCGCACCGGCTGGGAACTGGATACGCTGGTCAGTGCGCTCATGACAGCGCTTCCCGACCATGCCGCCAGTCCCCTGATGACCCGACTGCAGGACGAGCTGCGCACGGAATCTGTCCGGTCTCAGGCCCGTGAACAGTTTACCGGTGCGGTGGACCGGAT > NC_000913/2068939‑2069118
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 19 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
ACATCCGGTTGTGGCCGTATCGGCCCGCACCGGCTGGGAACTGGATACGCTGGTCAGTGCGCTCATGACAGCGCTTCCCGACCATGCCGCCAGTCCCCTGATGACCCGACTGCAGGACGAGCTGCGCACGGAATCTGTCCGGTCTCAGGCCCGTGAACAGTTTACCGGTGCGGTGGACCGGATATTT > NC_000913/2068936‑2069122
|
ACATCCGGTTGTGGCCGTATCGGCCCGCACCGGCTGGGAACTGGATACGCTGGTCAGTGCGCTCATGACAGCGCTTCCCGACCATGCCGCCAGC > SRR4302543.4290190/1‑94 (MQ=60)
ATCCGGTTGTGGCCGTATCGGCCCGCACCGGCTGGGAACTGGATACGCTGGTCAGTGCGCTCATGACAGCGCTTCCCGACCATGCCGCCAGCCC < SRR4302543.7531668/94‑1 (MQ=60)
ATCCGGTTGTGGCCGTATCGGCCCGCACCGGCTGGGAACTGGATACGCTGGTCAGTGCGCTCATGACAGCGCTTCCCGACCATGCCGCCAGCCC > SRR4302543.1572372/1‑94 (MQ=60)
CGGTTGTGGCCGTATCGGCCCGCACCGGCTGGGAACTGGATACGCTGGTCAGTGCGCTCATGACAGCGCTTCCCGACCATGCCGCCAGCCCCCT < SRR4302543.6639156/94‑1 (MQ=60)
CGGTTGTGGCCGTATCGGCCCGCACCGGCTGGGAACTGGATACGCTGGTCAGGGCGCTCATGACAGCGCTTCCCGACCATGCCGCCAGCCCCCT > SRR4302543.7069041/1‑94 (MQ=60)
tcgGGCCGTAGCGGCCCGCAGCGGCTGAGAACTGGATACGCTGTTCAGTGCGCTCATTACAGCGCTTCCCGACCATGCCGCCAGCCCCCTGATG < SRR4302543.6712107/91‑1 (MQ=60)
TGTGGCCGTATCGGCCCGCACCGGCTGGGAACTGGATACGCTGGTCAGTGCGCTCATGACAGCGCTTCCCGACCATGCCGCCAGCCCCCTGATG < SRR4302543.6712106/94‑1 (MQ=60)
GTGGCCGTATCGGCCCGCACCGGCTGGGAACTGGATACGCTGGTCAGTGCGCTCATGACAGCGCTTCCCGACCATGCCGCCAGCCCCCTGATGA > SRR4302543.4533679/1‑94 (MQ=60)
GCCGTATCGGCCCGCACCGGCTGGGCACTGGATACGCTGGTCCGTGCGCTCATGACACCGCCTCCCGACCATGCCGCCAGCCCCCTGATGCCCC > SRR4302543.232753/1‑94 (MQ=60)
CCGTATCGGCCCGCACCGGCTGGGAACTGGATACGCTGGTCAGTGCGCTCATGACAGCGCTTCCCGACCATGCCGCCAGCCCCCTGATGACCCG < SRR4302543.6512621/94‑1 (MQ=60)
CCGTATCGGCCCGCACCGGCTGGGAACTGGATACGCTGGTCAGTGCGCTCATGACAGCGCTTCCCGACCATGCCGCCAGCCCCCTGATGACCCG < SRR4302543.7455251/94‑1 (MQ=60)
GTATCGGCCCGCACCGGCTGGGAACTGGATACGCTGGTCAGTGCGCTCATGACAGCGCTTCCCGACCATGCCGCCAGCCCCCTGATGACCCGAC < SRR4302543.437436/94‑1 (MQ=60)
TATCGGCCCGCACCGGCTGGGAACTGGATACGCTGGTCAGTGCGCTCATGACAGCGCTTCCCGACCATGCCGCCAGCCCCCTGATGACCCGACT < SRR4302543.397132/94‑1 (MQ=60)
TATCGGCCCGCACCGGCTGGGAACTGGATACGCTGGTCAGTGCGCTCATGACAGCGCTTCCCGACCATGCCGCCAGCCCCCTGATGACCCGACT > SRR4302543.6405064/1‑94 (MQ=60)
TATCGGCCCGCACCGGCTGGGAACTGGATACGCTGGTCAGTGCGCTCATGACAGCGCTTCCCGACCATGCCGCCAGCCCCCTGATGACCCGACT < SRR4302543.6901156/94‑1 (MQ=60)
ATCGGCCCGCACCGGCTGGGAACTGGATACGCTGGTCAGTGCGCTCATGACAGCGCTTCCCGACCATGCCGCCAGCCCCCTGATGACCCGACTG > SRR4302543.5245254/1‑94 (MQ=60)
GGCCCGCACCGGCTGGGAACTGGATACGCTGGTCAGTGCGCTCATGACAGCGCTTCCCGACCATGCCGCCAGCCCCCTGATGACCCGACTGCAG < SRR4302543.6437517/94‑1 (MQ=60)
GGCCCGCACCGGCTGGGAACTGGATACGCTGGTCAGTGCGCTCATGACAGCGCTTCCCGACCATGCCGCCAGCCCCCTGATGACCCGACTGCAG > SRR4302543.5141974/1‑94 (MQ=60)
GCCCGCACCGGCTGGGAACTGGATACGCTGGTCAGTGCGCTCATGACAGCGCTTCCCGACCATGCCGCCAGCCCCCTGATGACCCGACTGCAGG < SRR4302543.4119756/94‑1 (MQ=60)
GCCCGCACCGGCTGGGAACTGGATACGCTGGTCAGTGCGCTCATGACAGCGCTTCCCGACCATGCCGCCAGCCCCCTGATGACCCGACTGCAGG > SRR4302543.5534012/1‑94 (MQ=60)
GCCCGCACCGGCTGGGAACTGGATACGCTGGTCAGTGCGCTCATGACAGCGCTTCCCGACCATGCCGCCAGCCCCCTGATGACCCGACTGCAGG > SRR4302543.4562246/1‑94 (MQ=60)
CCCGCACCGGCTGGGAACTGGATACGCTGGTCAGTGCGCTCATGACAGCGCTTCCCGACCATGCCGCCAGCCCCCTGATGACCCGACTGCAGGA > SRR4302543.531069/1‑94 (MQ=60)
CCGCACCGGCTGGGAACTGGATACGCTGGTCAGTGCGCTCATGACAGCGCTTCCCGACCATGCCGCCAGCCCCCTGATGACCCGACTGCAGGAC < SRR4302543.2270316/94‑1 (MQ=60)
CCGCACCGGCTGGGAACTGGATACGCTGGTCAGTGCGCTCATGACAGCGCTTCCCGACCATGCCGCCAGCCCCCTGATGACCCGACTGCAGGAC > SRR4302543.6326193/1‑94 (MQ=60)
CGCACCGGCTGGGAACTGGATACGCTGGTCAGTGCGCTCATGACAGCGCTTCCCGACCATGCCGCCAGCCCCCTGATGACCCGACTGCAGGACG < SRR4302543.6878679/94‑1 (MQ=60)
CGCACCGGCTGGGAACTGGATACGCTGGTCAGTGCGCTCATGACAGCGCTTCCCGACCATGCCGCCAGCCCCCTGATGACCCGACTGCAGGACG > SRR4302543.3937634/1‑94 (MQ=60)
CGCACCGGCTGGGAACTGGATACGCTGGTCAGTGCGCTCATGACAGCGCTTCCCGACCATGCCGCCAGCCCCCTGATGACCCGACTGCAGGACG < SRR4302543.362564/94‑1 (MQ=60)
CGCACCGGCTGGGAACTGGATACGCTGGTCAGTGCGCTCATGACAGCGCTTCCCGACCATGCCGCCAGCCCCCTGATGACCCGACTGCAGGACG > SRR4302543.2682076/1‑94 (MQ=60)
CACCGGCTGGGAACTGGATACGCTGGTCAGTGCGCTCATGACAGCGCTTCCCGACCATGCCGCCAGCCCCCTGATGACCCGACTGCAGGACGAG < SRR4302543.3621342/94‑1 (MQ=60)
ACCGGCTGGGAACTGGATACGCTGGTCAGTGCGCTCATGACAGCGCTTCCCGACCATGCCGCCAGCCCCCTGATGACCCGACTGCAGGACGAGC < SRR4302543.4867854/94‑1 (MQ=60)
CCGGCTGGGAACTGGATACGCTGGTCAGTGCGCTCATGACAGCGCTTCCCGACCATGCCGCCAGCCCCCTGATGACCCGACTGCAGGACGAGCT < SRR4302543.3423616/94‑1 (MQ=60)
CGGCTGGGAACTGGATACGCTGGTCAGTGCGCTCATGACAGCGCTTCCCGACCATGCCGCCAGCCCCCTGATGACCCGACTGCAGGACGAGCTG < SRR4302543.7204862/94‑1 (MQ=60)
GGCTGGGAACTGGATACGCTGGTCAGTGCGCTCATGACAGCGCTTCCCGACCATGCCGCCAGCCCCCTGATGACCCGACTGCAGGACGAGCTGC > SRR4302543.7278412/1‑94 (MQ=60)
GCTGGGAACTGGATACGCTGGTCAGTGCGCTCATGACAGCGCTTCCCGACCATGCCGCCAGCCCCCTGATGACCCGACTGCAGGACGAGCTGCG < SRR4302543.1960471/94‑1 (MQ=60)
GCTGGGAACTGGATACGCTGGTCAGTGCGCTCATGACAGCGCTTCCCGACCATGCCGCCAGCCCCCTGATGACCCGACTGCAGGACGAGCTGCG > SRR4302543.3699889/1‑94 (MQ=60)
CTGGGAACTGGATACGCTGGTCAGTGCGCTCATGACAGCGCTTCCCGACCATGCCGCCAGCCCCCTGATGACCCGACTGCAGGACGAGCTGCGC > SRR4302543.820042/1‑94 (MQ=60)
TGGGAACTGGATACGCTGGTCAGTGCGCTCATGACAGCGCTTCCCGACCATGCCGCCAGCCCCCTGATGACCCGACTGCAGGACGAGCTGCGCA < SRR4302543.122847/94‑1 (MQ=60)
TGGGAACTGGATACGCTGGTCAGTGCGCTCATGACAGCGCTTCCCGACCATGCCGCCAGCCCCCTGATGACCCGACTGCAGGACGAGCAGCGCC > SRR4302543.4719028/1‑94 (MQ=60)
GGAACTGGATACGCTGGTCAGTGCGCTCATGACAGCGCTTCCCGACCATGCCGCCAGCCCCCTGATGACCCGACTGCAGGACGAGCTGCGCACG < SRR4302543.7644900/94‑1 (MQ=60)
GAACTGGATACGCTGGTCAGTGCGCTCATGACAGCGCTTCCCGACCATGCCGCCAGCCCCCTGATGACCCGACTGCAGGACGAGCTGCGCACGG < SRR4302543.1498431/94‑1 (MQ=60)
GAACTGGATACGCTGGTCAGTGCGCTCATGACAGCGCTTCCCGACCATGCCGCCAGCCCCCTGATGACCCGACTGCAGGACGAGCTGCGCACGG > SRR4302543.7589584/1‑94 (MQ=60)
AACTGGATACGCTGGTCAGTGCGCTCATGACAGCGCTTCCCGACCATGCCGCCAGCCCCCTGATGACCCGACTGCAGGACGAGCTGCGCACGGA > SRR4302543.3081580/1‑94 (MQ=60)
ACTGGATACGCTGGTCAGTGCGCTCATGACAGCGCTTCCCGACCATGCCGCCAGCCCCCTGATGACCCGACTGCAGGACGAGCTGCGCACGGAA > SRR4302543.2024993/1‑94 (MQ=60)
ACTGGATACGCTGGTCAGTGCGCTCATGACAGCGCTTCCCGACCATGCCGCCAGCCCCCTGATGACCCGACTGCAGGACGAGCTGCGCACGGAA > SRR4302543.2024992/1‑94 (MQ=60)
CTGGATACGCTGGTCAGTGCGCTCATGACAGCGCTTCCCGACCATGCCGCCAGCCCCCTGATGACCCGACTGCAGGACGAGCTGCGCACGGAAT < SRR4302543.7050004/94‑1 (MQ=60)
ATACGCTGGTCAGTGCGCTCATGACAGCGCTTCCCGACCATGCCGCCAGCCCCCTGATGACCCGACTGCAGGACGAGCTGCGCACGGAATCTGT > SRR4302543.7315447/1‑94 (MQ=60)
ATACGCTGGTCAGTGCGCTCATGACAGCGCTTCCCGACCATGCCGCCAGCCCCCTGATGACCCGACTGCAGGACGAGCTGCGCACGGAATCTGA < SRR4302543.4318222/94‑1 (MQ=60)
ACGCTGGTCAGTGCGCTCATGACAGCGCTTCCCGACCATGCCGCCAGCCCCCTGATGACCCGACTGCAGGACGAGCTGCGCACGGAATCTGTCC < SRR4302543.4287969/94‑1 (MQ=60)
ACGCTGGTCAGTGCGCTCATGACAGCGCTTCCCGACCATGCCGCCAGCCCCCTGATGACCCGACTGCAGGACGAGCTGCGCACGGAATCTGTCC > SRR4302543.6103625/1‑94 (MQ=60)
ACGCTGGTCAGTGCGCTCATGACAGCGCTTCCCGACCATGCCGCCAGCCCCCTGATGACCCGACTGCAGGACGAGCTGCGCACGGAATCTGTCC < SRR4302543.2977871/94‑1 (MQ=60)
CGCTGGTCAGTGCGCTCATGACAGCGCTTCCCGACCATGCCGCCAGCCCCCTGATGACCCGACTGCAGGACGAGCTGCGCACGGAATCTGTCCG < SRR4302543.5218242/94‑1 (MQ=60)
GCTGGTCAATCCGCTCATGCCAGCGGTTCCCGACCATGCCGCCAACCCCCTGATGACCCGACTGCAGGACGAGGTGCGCACGGAATCTGTCCGG < SRR4302543.2364292/94‑1 (MQ=60)
CTGGTCAGTGCGCTCATGACAGCGCTTCCCGACCATGCCGCCAGCCCCCTGATGACCCGACTGCAGGACGAGCTGCGCACGGAATCTGTCCGGT > SRR4302543.5545840/1‑94 (MQ=60)
CTGGTCAGTGCGCTCATGACAGCGCTTCCCGACCATGCCGCCAGCCCCCTGATGACCCGACTGCAGGACGAGCTGCGCACGGAATCTGTCCGGT < SRR4302543.2248942/94‑1 (MQ=60)
TGGTCAGTGCGCTCATGACAGCGCTTCCCGACCATGCCGCCAGCCCCCTGATGACCCGACTGCAGGACGAGCTGCGCACGGAATCTGTCCGGTC < SRR4302543.2621590/94‑1 (MQ=60)
GGTCAGTGCGCTCATGACAGCGCTTCCCGACCATGCCGCCAGCCCCCTGATGACCCGACTGCAGGACGAGCTGCGCACGGAATCTGTCCGGTCT > SRR4302543.2442702/1‑94 (MQ=60)
GTCAGTGCGCTCATGACAGCGCTTCCCGACCATGCCGCCAGCCCCCTGATGACCCGACTGCAGGACGAGCTGCGCACGGAATCTGTCCGGTCTC > SRR4302543.7057822/1‑94 (MQ=60)
TCAGTGCGCTCATGACAGCGCTTCCCGACCATGCCGCCAGCCCCCTGATGACCCGACTGCAGGACGAGCTGCGCACGGAATCTGTCCGGTCTCA > SRR4302543.7510232/1‑94 (MQ=60)
CAGTGCGCTCATGACAGCGCTTCCCGACCATGCCGCCAGCCCCCTGATGACCCGACTGCAGGACGAGCTGCGCACGGAATCTGTCCGGTCTCAG < SRR4302543.1209820/94‑1 (MQ=60)
CAGTGCGCTCATGACAGCGCTTCCCGACCATGCCGCCAGCCCCCTGATGACCCGACTGCAGGACGAGCTGCGCACGGAATCTGTCCGGTCTCAG > SRR4302543.497823/1‑94 (MQ=60)
AGTGCGCTCATGACAGCGCTTCCCGACCATGCCGCCAGCCCCCTGATGACCCGACTGCAGGACGAGCTGCGCACGGAATCTGTCCGGTCTCAGG < SRR4302543.7350879/94‑1 (MQ=60)
GTGCGCTCATGACAGCGCTTCCCGACCATGCCGCCAGCCCCCTGATGACCCGACTGCAGGACGAGCTGCGCACGGAATCTGTCCGGTCTCAGGC < SRR4302543.2174377/94‑1 (MQ=60)
GCGCTCATGACAGCGCTTCCCGACCATGCCGCCAGCCCCCTGATGACCCGACTGCAGGACGAGCTGCGCACGGAATCTGTCCGGTCTCAGGCCC > SRR4302543.6071532/1‑94 (MQ=60)
GCTCATGACAGCGCTTCCCGACCATGCCGCCAGCCCCCTGATGACCCGACTGCAGGATGAGCTGCGCACGGAATCTGTCCGGTCTCATGCCCGT > SRR4302543.1490068/1‑94 (MQ=60)
GCTCATGACAGCGCTTCCCGACCATGCCGCCAGCCCCCTGATGACCCGACTGCAGGACGAGCTGCGCACGGTATCTGTCCGGTCTCAGGCCCGT < SRR4302543.3578480/94‑1 (MQ=60)
GCTCATGACAGCGCTTCCCGACCATGCCGCCAGCCCCCTGATGACCCGACTGCAGGACGAGCTGCGCACGGAATCTGTCCGGTCTCAGGCCCGT > SRR4302543.7941538/1‑94 (MQ=60)
GCTCATGACAGCGCTTCCCGACCATGCCGCCAGCCCCCTGATGACCCGACTGCAGGACGAGCTGCGCACGGAATCTGTCCGGTCTCAGGCCCGT > SRR4302543.1987767/1‑94 (MQ=60)
GCTCATGACAGCGCTTCCCGACCATGCCGCCAGCCCCCTGATGACCCGACTGCAGGACGAGCTGCGCACGGAATCTGTCCGGTCTCAGGCCCGT > SRR4302543.342887/1‑94 (MQ=60)
CTCATGACAGCGCTTCCCGACCATGCCGCCAGCCCCCTGATGACCCGACTGCAGGACGAGCTGCGCACGGAATCTGTCCGGTCTCAGGCCCGTG > SRR4302543.1616459/1‑94 (MQ=60)
CTCATGACAGCGCTTCCCGACCATGCCGCCAGCCCCCTGATGACCCGACTGCAGGACGAGCTGCGCACGGAATCTGTCCGGTCTCAGGCCCGTG < SRR4302543.7520795/94‑1 (MQ=60)
CATGACAGCGCTTCCCGACCATGCCGCCAGCCCCCTGATGACCCGACTGCAGGACGAGCTGCGCACGGAATCTGTCCGGTCTCAGGCCCGTGAA > SRR4302543.7217684/1‑94 (MQ=60)
ATGACAGCGCTTCCCGACCATGCCGCCAGCCCCCTGATGACCCGACTGCAGGACGAGCTGCGCACGGAATCTGTCCGGTCTCAGGCCCGTGAAC < SRR4302543.7635268/94‑1 (MQ=60)
ATGACAGCGCTTCCCGACCATGCCGCCAGCCCCCTGATGACCCGACTGCAGGACGAGCTGCGCACGGAATCTGTCCGGTCTCAGGCCCGTGAAC < SRR4302543.3609150/94‑1 (MQ=60)
TGACAGCGCTTCCCGACCATGCCGCCAGCCCCCTGATGACCCGACTGCAGGACGAGCTGCGCACGGAATCTGTCCGGTCTCAGGCCCGTGAACA < SRR4302543.6344803/94‑1 (MQ=60)
GACAGCGCTTCCCGACCATGCCGCCAGCCCCCTGATGACCCGACTGCAGGACGAGCTGCGCACGGAATCTGTCCGGTCTCAGGCCCGTGAACAG < SRR4302543.3551558/94‑1 (MQ=60)
ACAGCGCTTCCCGACCATGCCGCCAGCCCCCTGATGACCCGACTGCAGGACGAGCTGCGCACGGAATCTGTCCGGTCTCAGGCCCGTGAACAGT < SRR4302543.7620647/94‑1 (MQ=60)
CAGCGCTTCCCGACCATGCCGCCAGCCCCCTGATGACCCGACTGCAGGACGAGCTGCGCACGGAATCTGTCCGGTCTCAGGCCCGTGAACAGTT < SRR4302543.1155746/94‑1 (MQ=60)
AGCGCTTCCCGACCATGCCGCCATCCCCCTGATGACCCGACTGCATGACGAGCTGCGCACGGAATCTGTCCGGTCTCAGGCCCGTGAACAGTTT > SRR4302543.5642843/1‑94 (MQ=60)
AGCGCTTCCCGACCATGCCGCCAGCCCCCTGATGACCCGACTGCAGGACGAGCTGCGCACGGAATCTGTCCGGTCTCAGGCCCGTGAACAGTTT < SRR4302543.2216810/94‑1 (MQ=60)
CGCTTCCCGACCATGCCGCCAGCCCCCTGATGACCCGACTGCAGGACGAGCTGCGCACGGAATCTGTCCGGTCTCAGGCCCGTGAACAGTTTAC < SRR4302543.3896220/94‑1 (MQ=60)
GCTTCCCGACCATGCCGCCAGCCCCCTGATGACCCGACTGCAGGACGAGCTGCGCACGGAATCTGTCCGGTCTCAGGCCCGTGAACAGTTTACC < SRR4302543.5329709/94‑1 (MQ=60)
GCTTCCCGACCATGCCGCCAGCCCCCTGATGACCCGACTGCAGGACGAGCTGCGCACGGAATCTGTCCGGTCTCAGGCCCGTGAACAGTTTACC < SRR4302543.7451605/94‑1 (MQ=60)
GCTTCCCGACCATGCCGCCAGCCCCCTGATGACCCGACTGCAGGACGAGCTGCGCACGGAATCTGTCCGGTCTCAGGCCCGTGAACAGTTTACC < SRR4302543.6579359/94‑1 (MQ=60)
CTTCCCGACCATGCCGCCAGCCCCCTGATGACCCGACTGCAGGACGAGCTGCGCACGGAATCTGTCCGGTCTCAGGCCCGTGAACAGTTTACCG > SRR4302543.3584576/1‑94 (MQ=60)
CTTCCCGACCATGCCGCCAGCCCCCTGATGACCCGACTGCAGGACGAGCTGCGCACGGAATCTGTCCGGTCTCAGGCCCGTGAACAGTTTACCG < SRR4302543.1798372/94‑1 (MQ=60)
CTTCCCGACCATGCCGCCAGCCCCCTGATGACCCGACTGCAGGACGAGCTGCGCACGGAATCTGTCCGGTCTCAGGCCCGTGAACAGTTTACCG > SRR4302543.159958/1‑94 (MQ=60)
CTTCCCGACCATGCCGCCAGCCCCCTGATGACCCGACTGCAGGACGAGCTGCGCACGGAATCTGTCCGGTCTCAGGCCCGTGAACAGTTTACCG < SRR4302543.6791219/94‑1 (MQ=60)
TTCCCGACCATGCCGCCAGCCCCCTGATGACCCGACTGCAGGACGAGCTGCGCACGGAATCTGTCCGGTCTCAGGCCCGTGAACAGTTTACCGG > SRR4302543.2095378/1‑94 (MQ=60)
CCGACCCTGCCGCCAGCCCCCTGATGACCCGACTGCAGGACGAGCTGCGCACGGAATCTGTCCGGTCTCAGGCCCGTGAACAGTTTACCGGTGC < SRR4302543.4289672/94‑1 (MQ=60)
CCGACCATGCCGCCAGCCCCCTGATGACCCGACTGCAGGACGAGCTGCGCACGGAATCTGTCCGGTCTCAGGCCCGTGAACAGTTTACCGGTGC < SRR4302543.3198773/94‑1 (MQ=60)
CCGACCATGCCGCCAGCCCCCTGATGACCCGACTGCAGGACGAGCTGCGCACGGAATCTGTCCGGTCTCAGGCCCGTGAACAGTTTACCGGTGC < SRR4302543.4029576/94‑1 (MQ=60)
CGACCATGCCGCCAGCCCCCTGATGACCCGACTGCAGGACGAGCTGCGCACGGAATCTGTCCGGTCTCAGGCCCGTGAACAGTTTACCGGTGCG < SRR4302543.5461502/94‑1 (MQ=60)
CGACCATGCCGCCAGCCCCCTGATGACCCGACTGCAGGACGAGCTGCGCACGGAATCTGTCCGGTCTCAGGCCCGTGAACAGTTTACCGGTGCG < SRR4302543.326781/94‑1 (MQ=60)
GACCATGCCGCCAGCCCCCTGATGACCCGACTGCAGGACGAGCTGCGCACGGAATCTGTCCGGTCTCAGGCCCGTGAACAGTTTACCGGTGCGG < SRR4302543.682971/94‑1 (MQ=60)
GACCATGCCGCCAGCCCCCTGATGACCCGACTGCAGGACGAGCTGCGCACGGAATCTGTCCGGTCTCAGGCCCGTGAACAGTTTACCGGTGCGG < SRR4302543.3540371/94‑1 (MQ=60)
GACCATGCCGCCAGCCCCCTGATGACCCGACTGCAGGACGAGCTGCGCACGGAATCTGTCCGGTCTCAGGCCCGTGAACAGTTTACCGGTGCGG > SRR4302543.4269218/1‑94 (MQ=60)
GACCATGCCGCCAGCCCCCTGATGACCCGACTGCAGGACGAGCTGCGCACGGAATCTGTCCGGTCTCAGGCCCGTGAACAGTTTACCGGTGCGG > SRR4302543.4059107/1‑94 (MQ=60)
GACCATGCCGCCAGCCCCCTGATGACCCGACTGCAGGACGAGCTGCGCACGGAATCTGTCCGGTCTCAGGCCCGTGAACAGTTTACCGGTGCGG > SRR4302543.6349550/1‑94 (MQ=60)
CCATGCCGCCAGCCCCCTGATGACCCGACTGCAGGACGAGCTGCGCACGGAATCTGTCCGGTCTCAGGCCCGTGAACAGTTTACCGGTGCGGTG < SRR4302543.6234834/94‑1 (MQ=60)
CCATGCCGCCAGCCCCCTGATGACCCGACTGCAGGACGAGCTGCGCACGGAATCTGTCCGGTCTCAGGCCCGTGAACAGTTTACCGGTGCGGTG > SRR4302543.2871186/1‑94 (MQ=60)
CCATGCCGCCAGCCCCCTGATGACCCGACTGCAGGACGAGCTGCGCACGGAATCTGTCCGGTCTCAGGCCCGTGAACAGTTTACCGGTGCGGTG < SRR4302543.757740/94‑1 (MQ=60)
CCATGCCGCCAGCCCCCTGATGACCCGACTGCAGGACGAGCTGCGCACGGAATCTGTCCGGTCTCAGGCCCGTGAACAGTTTACCGGTGCGGTG > SRR4302543.5101961/1‑94 (MQ=60)
CCATGCCGCCAGCCCCCTGATGACCCGACTGCAGGACGAGCTGCGCACGGAATCTGTCCGGTCTCAGGCCCGTGAACAGTTTACCGGTGCGGTG < SRR4302543.7400261/94‑1 (MQ=60)
CCATGCCGCCAGCCCCCTGATGACCCGACTGCAGGACGAGCTGCGCACGGAATCTGTCCGGTCTCAGGCCCGTGAACAGTTTACCGGTGCGGTG > SRR4302543.2096441/1‑94 (MQ=60)
CCATGCCGCCAGCCCCCTGATGACCCGACTGCAGGACGAGCTGCGCACGGAATCTGTCCGGTCTCAGGCCCGTGAACAGTTTACCGGTGCGGTG > SRR4302543.1161403/1‑94 (MQ=60)
ATGCCGCCAGCCCCCTGATGACCCGACTGCAGGACGAGCTGCGCACGGAATCTGTCCGGTCTCAGGCCCGTGAACAGTTTACCGGTGCGGTGGA > SRR4302543.1963829/1‑94 (MQ=60)
TGCCGCCAGCCCCCTGATGACCCGACTGCAGGACGAGCTGCGCACGGAATCTGTCCGGTCTCAGGCCCGTGCACAGTTTACCGGTGCGGTGGAC > SRR4302543.1397811/1‑94 (MQ=60)
TGCCGCCAGCCCCCTGATGACCCGACTGCAGGACGAGCTGCGCACGGAATCTGTCCGGTCTCAGGCCCGTGAACAGTTTACCGGTGCGGTGGAC > SRR4302543.4435158/1‑94 (MQ=60)
CGCCAGCCCCCTGATGACCCGACTGCAGGACGAGCTGCGCACGGAATCTGTCCGGTCTCAGGCCCGTGAACAGTTTACCGGTGCGGTGGACCGG < SRR4302543.6800012/94‑1 (MQ=60)
CGCCAGCCCCCTGATGACCCGACTGCAGGACGAGCTGCGCACGGAATCTGTCCGGTCTCAGGCCCGTGAACAGTTTACCGGTGCGGTGGACCGG > SRR4302543.2314241/1‑94 (MQ=60)
GCCAGCCCCCTGATGACCCGACTGCAGGACGAGCTGCGCACGGAATCTGTCCGGTCTCAGGCCCGTGAACAGTTTACCGGTGCGGTGGACCGGA > SRR4302543.1295890/1‑94 (MQ=60)
GCCAGCCCCCTGATGACCCGACTGCAGGACGAGCTGCGCACGGAATCTGTCCGGTCTCAGGCCCGTGAACAGTTTACCGGTGCGGTGGACCGGA > SRR4302543.2301015/1‑94 (MQ=60)
CCAGCCCCCTGATGACCCGACTGCAGGACGAGCTGCGCACGGAATCTGTCCGGTCTCAGGCCCGTGAACAGTTTACCGGTGCGGTGGACCGGAT > SRR4302543.2676082/1‑94 (MQ=60)
AGCCCCCTGATGACCCGACTGCAGGACGAGCTGCGCACGGAATCTGTCCGGTCTCAGGCCCGTGAACAGTTTACCGGTGCGGTGGACCGGATAT < SRR4302543.3864399/94‑1 (MQ=60)
AGCCCCCTGATGACCCGACTGCAGGACGAGCTGCGCACGGAATCTGTCCGGTCTCAGGCCCGTGAACAGTTTACCGGTGCGGTGGACCGGATAT > SRR4302543.2026854/1‑94 (MQ=60)
AGCCCCCTGATGACCCGACTGCAGGACGAGCGGCGCACGGAATCTGTCCGGTCTCAGGCCCGTGAACAGTTTACCGGTGCGGTGGACCGGATAT < SRR4302543.2649576/94‑1 (MQ=60)
CCCCCTGATGACCCGACTGCAGGACGAGCTGCGCACGGAATCTGTCCGGTCTCAGGCCCGTGAACAGTTTACCGGTGCGGTGGACCGGATATTT < SRR4302543.7530923/94‑1 (MQ=60)
CCCCCTGATGACCCGACTGCAGGACGAGCTGCGCACGGAATCTGTCCGGTCTCAGGCCCGTGAACAGTTTACCGGTGCGGTGGACCGGATATTT > SRR4302543.7132968/1‑94 (MQ=60)
CCCCCTGATGACCCGACTGCAGGACGAGCTGCGCACGGAATCTGTCCGGTCTCAGGCCCGTGAACAGTTTACCGGTGCGGTGGACCGGATATTT > SRR4302543.2074001/1‑94 (MQ=60)
|
ACATCCGGTTGTGGCCGTATCGGCCCGCACCGGCTGGGAACTGGATACGCTGGTCAGTGCGCTCATGACAGCGCTTCCCGACCATGCCGCCAGTCCCCTGATGACCCGACTGCAGGACGAGCTGCGCACGGAATCTGTCCGGTCTCAGGCCCGTGAACAGTTTACCGGTGCGGTGGACCGGATATTT > NC_000913/2068936‑2069122
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 2 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
