Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I1 R1
|
1696 |
279.3 |
15874187 |
97.8% |
15524954 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
2,075,196 |
(G)5→4 |
coding (63/369 nt) |
yeeU → |
putative structural protein |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 2,075,192 | 0 | G | . | 100.0%
| 867.2
/ NA
| 192 | coding (59/369 nt) | yeeU | putative structural protein |
| Reads supporting (aligned to +/- strand): ref base G (0/0); new base . (111/81); total (111/81) |
Only 100 of 219 total aligned reads displayed.
CATTCTTAGCCGATTTTCTGTAAGGATTTTATCGTGTCAGACACACTCCCCGGGACAACACTTCCCGACGACAATCACGACCGCCCCTGGTGGGGGCTGCCCTGCACCGTGACGCCCTGTTTCGGGGCACGTCTGGTGCAGGAGGGTAACCGGTTGCATTACCTTGCCGACCGCGCCGGT > NC_000913/2075101‑2075280
|
cATTCTTAGCCGATTTTCTGTAAGGATTTTATCGTGTCAGACACACTCCCCGGGACAACACTTCCCGACGACAATCACGACCGCCCCtggcgg > 2:2340262/1‑93 (MQ=255)
cttCTTAGCCGATTTTCTGTAAGGATTTTATCGTGTCAGACACACTCCCCGGGACAACACTTCCCGACGACAATCACGACCGCCCCTGGTggg < 2:4843459/92‑1 (MQ=255)
aTTCTTAGCCGATTTTCTGTAAGGTTTTTATCGTGTCAGACACACTCCCCGGGACAACACTTCCCGACGACAATCACGACCGCCCCTGGTggg < 2:6080060/93‑1 (MQ=255)
aTTCTTAGCCGATTTTCTGTAAGGATTTTATCGTGTCAGACACACTCCCCGGGACAACACTTCCCGACGACAATCACGACCGCCCCTGGTggg > 2:4557687/1‑93 (MQ=255)
aTTCTTAGCCGATTTTCTGTAAGGATTTTATCGTGTCAGACACACTCCCCGGGACAACACTTCCCGACGACAATCACGACCGCCCCTGGTggg > 1:6552230/1‑93 (MQ=255)
aTTCTTAGCCGATTTTCTGTAAGGATTTTATCGTGTCAGACACACTCCCCGGGACAACACTTCCCGACGACAATCACGACCGCCCCTGGTggg > 1:2584062/1‑93 (MQ=255)
aTTCTTAGCCGATTTTCTGTAAGGATTTTATCGTGTCAGACACACTCCCCGGGACAACACTTCCCGACGACAATCACGACCGCCCCTGGTggg > 2:5361276/1‑93 (MQ=255)
ttCTTAGCCGATTTTCTGTAAGGATTTTATCGTGTCAGACACACTCCCCGGGACAACACTTCCCGACGACAATCACGACCGCCCCTGGTgggg > 1:1227721/1‑93 (MQ=255)
ttCTTAGCCGATTTTCTGTAAGGATTTTATCGTGTCAGACACACTCCCCGGGACAACACTTCCCGACGACAATCACGACCGCCCCTGGTgggg > 1:2414288/1‑93 (MQ=255)
tCTTAGCCGATTTTCTGTAAGGATTTTATCGTGTCAGACACACTCCCCGGGACAACACTTCCCGACGACAATCACGACCGCCCCTGGTggggc < 2:4193534/93‑2 (MQ=255)
cTTAGCCGATTTTCTGTAAGGATTTTATCGTGTCAGACACACTCCCCGGGACAACACTTCCCGACGACAATCACGACCGCCCCTGGTggggct < 2:2573062/93‑3 (MQ=255)
ttAGCCGATTTTCTGTAAGGATTTTATCGTGTCAGACACACTCCCCGGGACAACACTTCCCGACGACAATCACGACCGCCCCTGGTggggctg > 2:5293960/1‑90 (MQ=255)
aGCCGATTTTCTGTAAGGATTTTATCGTGTCAGACACACTCCCCGGGACAACACTTCCCGACGACAATCACGACCGCCCCTGGT‑GGGGCTGcc < 2:5429988/93‑1 (MQ=255)
aGCCGATTTTCTGTAAGGATTTTATCGTGTCAGACACACTCCCCGGGACAACACTTCCCGACGACAATCACGACCGCCCCTGGT‑GGGGCTGcc > 2:157769/1‑93 (MQ=255)
aGCCGATTTTCTGTAAGGATTTTATCGTGTCAGACACACTCCCCGGGACAACACTTCCCGACGACAATCACGACCGCCCCTGGT‑GGGGCTGcc > 2:6988868/1‑93 (MQ=255)
gCCGATTTTCTGTAAGGATTTTATCGTGTCAGACACACTCCCCGGGACAACACTTCCCGACGACAATCACGACCGCCCCTGGT‑GGGGCTGccc < 2:6240926/93‑1 (MQ=255)
cGATTTTCTGTAAGGATTTTATCGTGTCAGACACACTCCCCGGGACAACACTTCCCGACGACAATCACGACCGCCCCTGGT‑GGGGCTGCCCTg > 2:3419206/1‑93 (MQ=255)
cGATTTTCTGTAAGGATTTTATCGTGTCAGACACACTCCCCGGGACAACACTTCCCGACGACAATCACGACCGCCCCTGGT‑GGGGCTGCCCTg < 1:3710238/93‑1 (MQ=255)
cGATTTTCTGTAAGGATTTTATCGTGTCAGACACACTCCCCGGGACAACACTTCCCGACGACAATCACGACCGCCCCTGGT‑GGGGCTGCCCTg > 1:4467437/1‑93 (MQ=255)
aTTTTCTGTAAGGATTTTATCGTGTCAGACACACTCCCCGGGACAACACTTCCCGACGACAATCACGACCGCCCCTGGT‑GGGGCTGCCCTGcc > 1:6231372/1‑92 (MQ=255)
aTTTTCTGTAAGGATTTTATCGTGTCAGACACACTCCCCGGGACAACACTTCCCGACGACAATCACGACCGCCCCTGGT‑GGGGCTGCCCTGCa < 2:354648/93‑1 (MQ=255)
aTTTTCTGTAAGGATTTTATCGTGTCAGACACACTCCCCGGGACAACACTTCCCGACGACAATCACGACCGCCCCTGGT‑GGGGCTGCCCTGCa > 1:381289/1‑93 (MQ=255)
ttttCTGTAAGGATTTTATCGTGTCAGACACACTCCCCGGGACAACACTTCCCGACGACAATCACGACCGCCCCTGGT‑GGGGCTGCCCTGCAc > 1:3064766/1‑93 (MQ=255)
ttCTGTAAGGATTTTATCGTGTCAGACACACTCCCCGGGACAACACTTCCCGACGACAATCACGACCGCCCCTGGT‑GGGGCTGCCCTGCACCg < 2:4410017/93‑1 (MQ=255)
tCTGTAAGGATTTTATCGTGTCAGACACACTCCCCGGGACAACACTTCCCGACGACAATCACGACCGCCCCTGGT‑GGGGCTGCCCTGCACCGt > 1:2166107/1‑93 (MQ=255)
tCTGTAAGGATTTTATCGTGTCAGACACACTCCCCGGGACAACACTTCCCGACGACAATCACGACCGCCCCTGGT‑GGGGCTGCCCTGCACCGt < 1:1788048/93‑1 (MQ=255)
tGTAAGGATTTTATCGTGTCAGACACACTCCCCGGGACAACACTTCCCGACGACAATCACGACCGCCCCTGGT‑GGGGCTGCCCTGCACCGTGa > 2:614509/1‑93 (MQ=255)
tAAGGATTTTATCGTGTCAGACACACTCCCCGGGACAACACTTCCCGACGACAATCACGACCGCCCCTGGT‑GGGGCTGCCCTGCACCGTGACg > 1:7851964/1‑93 (MQ=255)
ggATTTTATCGTGTCAGACACACTCCCCGGGACAACACTTCCCGACGACAATCACGACCGCCCCTGGT‑GGGGCTGCCCTGCACCGTGACGccc < 2:7378460/93‑1 (MQ=255)
ggATTTTATCGTGTCAGACACACTCCCCGGGACAACACTTCCCGACGACAATCACGACCGCCCCTGGT‑GGGGCTGCCCTGCACCGTGACGccc < 2:942387/93‑1 (MQ=255)
gATTTTATCGTGTCAGACACACTCCCCGGGACAACACTTCCCGACGACAATCACGACCGCCCCTGGT‑GGGGCTGCCCTGCACCGTGACGCCCt > 1:4026541/1‑93 (MQ=255)
tttATCGTGTCAGACACACTCCCCGGGACAACACTTCCCGACGACAATCACGACCGCCCCTGGT‑GGGGCTGCCCTGCACCGTGACGCCCTGtt > 1:7617436/1‑93 (MQ=255)
ttATCGTGTCAGACACACTCCCCGGGACAACACTTCCCGACGACAATCACGACCGCCCCTGGT‑GGGGCTGCCCTGCACCGTGACGCCCTGttt > 1:1942084/1‑93 (MQ=255)
tATCGTGTCAGACACACTCCCCGGGACAACACTTCCCGACGACAATCACGACCGCCCCTGGT‑GGGGCTGCCCTGCACCCTGACGCCCTGTTTc > 1:5562306/1‑93 (MQ=255)
tCGTGTCAGACACACTCCCCGGGACAACACTTCCCGACGACAATCACGACCGCCCCTGGT‑GGGGCTGCCCTGCACCGTGACGCCCTGTTTCgg > 1:2748211/1‑93 (MQ=255)
gtgtCAGACACACTCCCCGGGACAACACTTCCCGACGACAATCACGACCGCCCCTGGT‑GGGGCTGCCCTGGACCGTGACGCCCTGTTTCgggg > 2:5646658/1‑93 (MQ=255)
gtgtCAGACACACTCCCCGGGACAACACTTCCCGACGACAATCACGACCGCCCCTGGT‑GGGGCTGCCCTGCACCGTGACGCCCTGTTTCgggg > 2:7052225/1‑93 (MQ=255)
gtgtCAGACACACTCCCCGGGACAACACTTCCCGACGACAATCACGACCGCCCCTGGT‑GGGGCTGCCCTGCACCGTGACGCCCTGTTTCgggg > 2:2898212/1‑93 (MQ=255)
gtgtCAGACACACTCCCCGGGACAACACTTCCCGACGACAATCACGACCGCCCCTGGT‑GGGGCTGCCCTGCACCGTGACGCCCTGTTTCgggg > 1:5908678/1‑93 (MQ=255)
gtgtCAGACACACTCCCCGGGACAACACTTCCCGACGACAATCACGACCGCCCCTGGT‑GGGGCTGCCCTGCACCCTGACGCCCTGTTTCgggg > 1:4852736/1‑93 (MQ=255)
aGACACACTCCCCGGGACAACACTTCCCGACGACAATCACGACCGCCCCTGGT‑GGGGCTGCCCTGCACCGTGACGCCCTGTTTCGGGGCACGt < 1:4565307/93‑1 (MQ=255)
aGACACACTCCCCGGGACAACACTTCCCGACGACAATCACGACCGCCCCTGGT‑GGGGCTGCCCTGCACCGTGACGCCCTGTTTCGGGGCACGt < 1:2552004/93‑1 (MQ=255)
aGACACACTCCCCGGGACAACACTTCCCGACGACAATCACGACCGCCCCTGGT‑GGGGCTGCCCTGCACCGTGACGCCCTGTTTCGGGGCACGt > 2:6950214/1‑93 (MQ=255)
gACACACTCCCCGGGACAACACTTCCCGACGACAATCACGACCGCCCCTGGT‑GGGGCTGCCCTGCACCGTGACGCCCTGTTTCGGGGCACGTc > 1:6214040/1‑93 (MQ=255)
gACACACTCCCCGGGACAACACTTCCCGACGACAATCACGACCGCCCCTGGT‑GGGGCTGCCCTGCACCGTGACGCCCTGTTTCGGGGCACGTc < 2:838527/93‑1 (MQ=255)
ccccTCCCCGGGACAACACTTCCCGACGACAATCACGACCGCCCCTGGT‑GGGGCTGCCCTGCACCGTGACGCCCTGTTTCGGGGCACGTCTgg < 2:1598506/90‑1 (MQ=255)
acacTCCCCGGGACAACACTTCCCGACGACAATCACGACCGCCCCTGGT‑GGGGCTGCCCTGCACCGTGACGCCCTGTTTCGGGGCACGTCTgg > 2:4017773/1‑93 (MQ=255)
acacTCCCCGGGACAACACTTCCCGACGACAATCACGACCGCCCCTGGT‑GGGGCTGCCCTGCACCGTGACGCCCTGTTTCGGGGCACGTCTgg > 2:2714285/1‑93 (MQ=255)
cacTCCCCGGGACAACACTGCCCGACGACAATCACGACCGCCCCTGGT‑GGGGCTGCCCTGCACCGTGACGCCCTGTTTCGGGGCACGTCTGGt < 1:1062619/93‑1 (MQ=255)
cacTCCCCGGCACAACACTTCCCGACGACAATCACGACCGCCCCTGGT‑GGGGCTGCCCTGCACCGTGACGCCCTGTTTCGGGGCACGTCTGGt < 2:1147217/93‑1 (MQ=255)
cTCCCCGGGACAACACTTCCCGACGACAATCACGACCGCCCCTGGT‑GGGGCTGCCCTGCACCGTGACGCCCTGTTTCGGGGCACGTCTGGTGc > 2:2283365/1‑93 (MQ=255)
tCCCCGGGACAACACTTCCCGACGACAATCACGACCGCCCCTGGT‑GGGGCTGCCCTGCACCGTGACGCCCTGTTTCGGGGCACGTCTGGTGCa > 2:4688614/1‑93 (MQ=255)
ccccGGGACACCACTTCCCGACGACAATCACGACCGCCCCTGGT‑GGGGCTGCCCTGCACCGTGACGCCCTGTTTCGGGGCACGTCTGGTGCag < 2:1434375/93‑1 (MQ=255)
cccGGGACAACACTTCCCGACGACAATCACGACCGCCCCTGGT‑GGGGCTGCCCTGCACCGTGACGCCCTGTTTCGGGGCACGTCTGGTGCagg > 2:7549366/1‑93 (MQ=255)
cccGGGACAACACTTCCCGACGACAATCACGACCGCCCCTGGT‑GGGGCTGCCCTGCACCGTGACGCCCTGTTTCGGGGCACGTCTGGTGCagg > 2:3743070/1‑93 (MQ=255)
ccGGGACAACACTTCCCGACGACAATCACGACCGCCCCTGGT‑GGGGCTGCCCTGCACCGTGACGCCCTGTTTCGGGGCACGTCTGGTGCagga < 2:1012741/93‑1 (MQ=255)
ccGGGACAACACTTCCCGACGACAATCACGACCGCCCCTGGT‑GGGGCTGCCCTGCACCGTGACGCCCTGTTTCGGGGCACGTCTGGTGCagga < 1:5127104/93‑1 (MQ=255)
cGGGACAACACTTCCCGACGACAATCACGACCGCCCCTGGT‑GGGGCTGCCCTGCACCGTGACGCCCTGTTTCGGGGCACGTCTGGTGCagggg > 1:5654017/1‑91 (MQ=255)
cGGGACAACACTTCCCGACGACAATCACGACCGCCCCTGGT‑GGGGCTGCCCTGCACCGTGACGCCCTGTTTCGGGGCACGTCTGGTGCaggag < 2:775051/93‑1 (MQ=255)
gggACAACACTTCCCGACGACAATCACGACCGCCCCTGGT‑GGGGCTGCCCTGCACCGTGACGCCCTGTTTCGGGGCACGTCTGGTGCaggagg < 2:581976/93‑1 (MQ=255)
gggACAACACTTCCCGACGACAATCACGACCGCCCCTGGT‑GGGGCTGCCCTGCACCGTGACGCCCTGTTTCGGGGCACGTCTGGTGCaggagg > 1:5327133/1‑93 (MQ=255)
ggACAACACTTCCCGACGACAATCACGACCGCCCCTGGT‑GGGGCTGCCCTGCACCGTGACGCCCTGTTTCGGGGCACGTCTGGTGCAGGAggg < 2:1762485/93‑1 (MQ=255)
ggACAACACTTCCCGACGACAATCACGACCGCCCCTGGT‑GGGGCTGCCCTGCACCGTGACGCCCTGTTTCGGGGCACGTCTGGTGCAGGAggg > 1:7015318/1‑93 (MQ=255)
gACAACACTTCCCGACGACAATCACGACCGCCCCTGGT‑GGGGCTGCCCTGCACCGTGACGCCCTGTTTCGGGGCACGTCTGGTGCAGGAGGGt < 1:6576717/93‑1 (MQ=255)
acaacaCTTCCTGACGACAATCACGACCGCCCCTGGT‑GGGGCTGCCCTGCACCGTGACGCCCTGTTTCGGGGCACGTCTGGTGCAGGAgggga > 2:1205346/1‑91 (MQ=255)
aacaCTTCCCGACGACAATCACGACCGCCCCTGGT‑GGGGCTGCCCTGCACCGTGACGCCCTGTTTCGGGGCACGTCTGGTGCAGGAGGGTAAc > 1:7110241/1‑93 (MQ=255)
aacaCTTCCCGACGACAATCACGACCGCCCCTGGT‑GGGGCTGCCCTGCACCGTGACGCCCTGTTTCGGGGCACGTCTGGTGCAGGAGGGTAAc < 1:1109082/93‑1 (MQ=255)
acacTTCCCGACGACAATCACGACCGCCCCTGGT‑GGGGCTGCCCTGCACCGTGACGCCCTGTTTCGGGGCACGTCTGGTGCAGGGGGGGAAcc > 1:2943765/1‑93 (MQ=255)
acacTTCCCGACGACAATCACGACCGCCCCTGGT‑GGGGCTGCCCTGCACCGTGACGCCCTGTTTCGGGGCACGTCTGGTGCAGGAGGGTAAcc < 2:4272928/93‑1 (MQ=255)
ttCCCGACGACAATCACGACCGCCCCTGGT‑GGGGCTGCCCTGCACCGTGACGCCCTGTTTCGGGGCACGTCTGGTGCAGGAGGGTAACCgggt > 1:3344960/1‑91 (MQ=255)
ttCCCGACGACAATCACGACCGCCCCTGGT‑GGGGCTGCCCTGCACCGTGACGCCCTGTTTCGGGGCACGTCTGGTGCAGGAGGGTAACCGGtt > 1:6187893/1‑93 (MQ=255)
ttCCCGACGACAATCACGACCGCCCCTGGT‑GGGGCTGCCCTGCACCGTGACGCCCTGTTTCGGGGCACGTCTGGTGCAGGAGGGGAACCgggt > 1:3423803/1‑91 (MQ=255)
ttCCCGACGACAATCACGACCGCCCCTGGT‑GGGGCTGCCCTGCACCGTGACGCCCTGTTTCGGGGCACGTCTGGTGCAGGAGGGGAACCGGtt > 2:6518073/1‑93 (MQ=255)
ctCCCGACGACAATCACGACCGCCCCTGGT‑GGGGCTGCCCTGCACCGTGACGCCCTGTTTCGGGGCACGTCTGGTGCAGGAGGGTAACCGGtt < 2:2418320/92‑1 (MQ=255)
cccGACGACAATCACGACCGCCCCTGGT‑GGGGCTGCCCTGCACCGTGACGCCCTGTTTCGGGGCACGTCTGGTGCAGGAGGGTAACCGGTTGc < 1:4644267/93‑1 (MQ=255)
acgacAATCACGACCGCCCCTGGT‑GGGGCTGCCCTGCACCGTGACGCCCTGTTTCGGGGCACGTCTGGTGCAGGAGGGTAACCGGTTGCAttc > 1:6032144/1‑92 (MQ=255)
gacAATCACGACCGCCCCTGGT‑GGGGCTGCCCTGCACCGTGACGCCCTGTTTCGGGGCACGTCTGGTGCAGGAGGGTAACCGGTTGCATTaac > 1:4159663/1‑91 (MQ=255)
acAATCACGACCGCCCCTGGT‑GGGGCTGCCCTGCACCGTGACGCCCTGTTTCGGGGCACGTCTGGTGCAGGAGGGTAACCGGTTGCATTACCt > 2:2951011/1‑93 (MQ=255)
acAATCACGACCGCCCCTGGT‑GGGGCTGCCCTGCACCGTGACGCCCTGTTTCGGGGCACGTCTGGTGCAGGAGGGTAACCGGTTGCATTACCt < 2:4075160/93‑1 (MQ=255)
acAATCACGACCGCCCCTGGT‑GGGGCTGCCCTGCACCGTGACGCCCTGTTTCGGGGCACGTCTGGTGCAGGAGGGTAACCGGTTGCATTACCt < 1:3838852/93‑1 (MQ=255)
acAATCACGACCGCCCCTGGT‑GGGGCTGCCCTGCACCGTGACGCCCTGTTTCGGGGCACGTCTGGTGCAGGAGGGTAACCGGTTGCATTACCt < 2:2079376/93‑1 (MQ=255)
aaTCACGACCGCCCCTGGT‑GGGGCTGCCCTGCACCGTGACGCCCTGTTTCGGGGCACGTCTGGTGCAGGAGGGGAACCGGTTGCATTTCCGTg > 1:2837648/1‑93 (MQ=255)
aTCACGACCGCCCCTGGT‑GGGGCTGCCCTGCACCGTGACGCCCTGTTTCGGGGCACGTCTGGGGCAGGAGGGTAACCGGGTGCATTACCTTGc > 1:1582302/1‑93 (MQ=255)
tCACGACCGCCCCTGGT‑GGGGCTGCCCTGCACCGTGACGCCCTGTTTCGGGGCACGTCTGGTGCAGGAGGGTAACCGGTTGCATTACCTTGcc > 1:6713192/1‑93 (MQ=255)
cACGACCGCCCCTGGT‑GGGGCTGCCCTGCACCGTGACGCCCTGTTTCGGGGCACGTCTGGTGCAGGAGGGTAACCGGTTGCATTACCTTGCCg < 1:1362370/93‑1 (MQ=255)
aCGACCGCCCCTGGT‑GGGGCTGCCCTGCACCGTGACGCCCTGTTTCGGGGCACGTCTGGTGCAGGAGGGTAACCGGTTGCATTACCTTGCCGa < 1:7747391/93‑1 (MQ=255)
aCGACCGCCCCTGGT‑GGGGCTGCCCTGCACCGTGACGCCCTGTTTCGGGGCACGTCTGGTGCAGGAGGGTAACCGGTTGCATTACCTTGCCGa > 2:1392495/1‑93 (MQ=255)
cGACCGCCCCTGGT‑GGGGCTGCCCTGCACCGTGACGCCCTGTTTCGGGGCACGTCTGGTGCAGGAGGGTAACCGGTTGCATTACCTTGCCGAc > 2:3260445/1‑93 (MQ=255)
gccGCCCCTGGT‑GGGGCTGCCCTGCACCGTGACGCCCTGTTTCGGGGCACGTCTGGTGCAGGAGGGTAACCGGTTGCATTACCTTGCCGACcg < 1:7798174/92‑1 (MQ=255)
aCCGCCCCTGGT‑GGGGCTGCCCTGCACCGTGACGCCCTGTTTCGGGGCACGTCTGGTGCAGGAGGGTAACCGGTTGCATTACCTTGCCGACcg > 2:2397731/1‑93 (MQ=255)
aCCGCCCCTGGT‑GGGGCTGCCCTGCACCGTGACGCCCTGTTTCGGGGCACGTCTGGTGCAGGAGGGGAACCGGTTGCATTACCTTGCCGACcg > 1:2257010/1‑93 (MQ=255)
aCCGCCCCTGGT‑GGGGCTGCCCTGCACCGTGACGCCCTGTTTCGGGGCACGTCTGGTGCAGGAGGGGAACCGGTTGCATTACCTTGCCGACcg > 1:3256066/1‑93 (MQ=255)
ccGCCCCTGGT‑GGGGCTGCCCTGCACCGTGACGCCCTGTTTCGGGGCACGTCTGGTGCAGGAGGGTAACCGGTTGCATTACCTTGCCGAcccc > 1:1468130/1‑91 (MQ=255)
ccGCCCCTGGT‑GGGGCTGCCCTGCACCGTGACGCCCTGTTTCGGGGCACGTCTGGTGCAGGAGGGTAACCGGTTGCATTACCTTGCCGACcgc > 2:860522/1‑93 (MQ=255)
ccTGGT‑GGGGCTGCCCTGCACCGTGACGCCCTGTTTCGGGGCACGTCTGGTGCAGGAGGGTAACCGGTTGCATTACCTTGCCGACCGCGCCgg > 2:5926476/1‑93 (MQ=255)
ccTGGT‑GGGGCTGCCCTGCACCGTGACGCCCTGTTTCGGGGCACGTCTGGTGCAGGAGGGTAACCGGTTGCATTACCTTGCCGACCGCGCCgg > 2:4999338/1‑93 (MQ=255)
ccTGGT‑GGGGCTGCCCTGCACCGTGACGCCCTGTTTCGGGGCACGTCTGGTGCAGGAGGGTAACCGGTTGCATTACCTTGCCGACCGCGCCgg > 1:7227110/1‑93 (MQ=255)
ccTGGT‑GGGGCTGCCCTGCACCGTGACGCCCTGTTTCGGGGCACGTCTGGTGCAGGAGGGGAACCGGTTGCATTACCTTGCCGACCGCGCCgg > 1:4406987/1‑93 (MQ=255)
cTGGT‑GGGGCTGCCCTGCACCGTGACGCCCTGTTTCGGGGCACGTCTGGTGCAGGAGGGTAACCGGTTGCATTACCTTGCCGACCGCGCCGGt > 1:1812697/1‑93 (MQ=255)
cTGGT‑GGGGCTGCCCTGCACCGTGACGCCCTGTTTCGGGGCACGTCTGGTGCAGGAGGGTAACCGGTTGCATTACCTTGCCGACCGCGCCGGt > 1:3522423/1‑93 (MQ=255)
|
CATTCTTAGCCGATTTTCTGTAAGGATTTTATCGTGTCAGACACACTCCCCGGGACAACACTTCCCGACGACAATCACGACCGCCCCTGGTGGGGGCTGCCCTGCACCGTGACGCCCTGTTTCGGGGCACGTCTGGTGCAGGAGGGTAACCGGTTGCATTACCTTGCCGACCGCGCCGGT > NC_000913/2075101‑2075280
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 18 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
GCCGATTTTCTGTAAGGATTTTATCGTGTCAGACACACTCCCCGGGACAACACTTCCCGACGACAATCACGACCGCCCCTGGTGGGGGCTGCCCTGCACCGTGACGCCCTGTTTCGGGGCACGTCTGGTGCAGGAGGGTAACCGGTTGCATTACCTTGCCGACCGCGCCGGTATCAGAGGC > NC_000913/2075109‑2075289
|
GCCGATTTTCTGTAAGGATTTTATCGTGTCAGACACACTCCCCGGGACAACACTTCCCGACGACAATCACGACCGCCCCTGGT‑GGGGCTGCCCT < SRR4302543.4753508/94‑1 (MQ=60)
CCGATTTTCTGTAAGGATTTTATCGTGTCAGACACACTCCCCGGGACAACACTTCCCGACGACAATCACGACCGCCCCTGGT‑GGGGCTGCCCTG > SRR4302543.4507940/1‑94 (MQ=60)
CGATTTTCTGTAAGGATTTTATCGTGTCAGACACACTCCCCGGGACAACACTTCCCGACGACAATCACGACCGCCCCTGGT‑GGGGCTGCCCTGC < SRR4302543.3742865/94‑1 (MQ=60)
CGATTTTCTGTAAGGATTTTATCGTGTCAGACACACTCCCCGGGACAACACTTCCCGACGACAATCACGACCGCCCCTGGT‑GGGGCTGCCCTGC > SRR4302543.3563490/1‑94 (MQ=60)
CGATTTTCTGTAAGGATTTTATCGTGTCAGACACACTCCCCGGGACAACACTTCCCGACGACAATCACGACCGCCCCTGGT‑GGGGCTGCCCTGC > SRR4302543.6626641/1‑94 (MQ=60)
GATTTTCTGTAAGGATTTTATCGTGTCAGACACACTCCCCGGGACAACACTTCCCGACGACAATCACGACCGCCCCTGGT‑GGGGCTGCCCTGCC > SRR4302543.7782950/1‑94 (MQ=60)
GATTTTCTGTAAGGATTTTATCGTGTCAGACACACTCCCCGGGACAACACTTCCCGACGACAATCACGACCGCCCCTGGT‑GGGGCTGCCCTGCC > SRR4302543.6290186/1‑94 (MQ=60)
GATTTTCTGTAAGGATTTTATCGTGTCAGACACACTCCCCGGGACAACACTTCCCGACGACAATCACGACCGCCCCTGGT‑GGGGCTGCCCTGCA > SRR4302543.384807/1‑94 (MQ=60)
ATTTTCTGTAAGGATTTTATCGTGTCAGACACACTCCCCGGGACAACACTTCCCGACGACAATCACGACCGCCCCTGGT‑GGGGCTGCCCTGCAC > SRR4302543.3092330/1‑94 (MQ=60)
ATTTTCTGTAAGGATTTTATCGTGTCAGACACACTCCCCGGGACAACACTTCCCGACGACAATCACGACCGCCCCTGGT‑GGGGCTGCCCTGCAC > SRR4302543.1161956/1‑94 (MQ=60)
TTTTCTGTAAGGATTTTATCGTGTCAGACACACTCCCCGGGACAACACTTCCCGACGACAATCACGACCGCCCCTGGT‑GGGGCTGCCCTGCACC > SRR4302543.5283181/1‑94 (MQ=60)
TTCTGTAAGGATTTTATCGTGTCAGACACACTCCCCGGGACAACACTTCCCGACGACAATCACGACCGCCCCTGGT‑GGGGCTGCCCTGCcccgg > SRR4302543.1751295/1‑89 (MQ=60)
TTCTGTAAGGATTTTATCGTGTCAGACACACTCCCCGGGACAACACTTCCCGACGACAATCACGACCGCCCCTGGT‑GGGGCTGCCCTGCACCGT > SRR4302543.2185514/1‑94 (MQ=60)
TCTGTAAGGATTTTATCGTGTCAGACACACTCCCCGGGACAACACTTCCCGACGACAATCACGACCGCCCCTGGT‑GGGGCTGCCCTGCACCGTG < SRR4302543.1804044/94‑1 (MQ=60)
TCTGTAAGGATTTTATCGTGTCAGACACACTCCCCGGGACAACACTTCCCGACGACAATCACGACCGCCCCTGGT‑GGGGCTGCCCTGCACCGTG > SRR4302543.1326984/1‑94 (MQ=60)
CTGTAAGGATTTTATCGTGTCAGACACACTCCCCGGGACAACACTTCCCGACGACAATCACGACCGCCCCTGGT‑GGGGCTGCCCTGCACCGTGA < SRR4302543.3752986/94‑1 (MQ=60)
GTAAGGATTTTATCGTGTCAGACACACTCCCCGGGACAACACTTCCCGACGACAATCACGACCGCCCCTGGT‑GGGGCTGCCCTGCACCGTGACG > SRR4302543.7925946/1‑94 (MQ=60)
TAAGGATTTTATCGTGTCAGACACACTCCCCGGGACAACACTTCCCGACGACAATCACGACCGCCCCTGGT‑GGGGCTGCCCTGCACCGTGACGC < SRR4302543.4488901/94‑1 (MQ=60)
AAGGATTTTATCGTGTCAGACACACTCCCCGGGACAACACTTCCCGACGACAATCACGACCGCCCCTGGT‑GGGGCTGCCCTGCACCGTGACGCC > SRR4302543.3310721/1‑94 (MQ=60)
GGATTTTATCGTGTCAGACACACTCCCCGGGACAACACTTCCCGACGACAATCACGACCGCCCCTGGT‑GGGGCTGCCCTGCACCGTGACGCCCT > SRR4302543.4062527/1‑94 (MQ=60)
GATTTTATCGTGTCAGACACACTCCCCGGGACAACACTTCCCGACGACAATCACGACCGCCCCTGGT‑GGGGCTGCCCTGCACCGTGACGCCCTG > SRR4302543.7841139/1‑94 (MQ=60)
ATTTTATCGTGTCAGACACACTCCCCGGGACAACACTTCCCGACGACAATCACGACCGCCCCTGGT‑GGGGCTGCCCTGCACCGTGACGCCCTGT > SRR4302543.4214015/1‑94 (MQ=60)
TTTTATCGTGTCAGACACACTCCCCGGGACAACACTTCCCGACGACAATCACGACCGCCCCTGGT‑GGGGCTGCCCTGCACCGTGACGCCCTGTT > SRR4302543.3531114/1‑94 (MQ=60)
TTTTATCGTGTCAGACACACTCCCCGGGACAACACTTCCCGACGACAATCACGACCGCCCCTGGT‑GGGGCTGCCCTGCACCGTGACGCCCTGTT > SRR4302543.7689741/1‑94 (MQ=60)
TTTTATCGTGTCAGACACACTCCCCGGGACAACACTTCCCGACGACAATCACGACCGCCCCTGGT‑GGGGCTGCCCTGCACCGTGACGCCCTGTT > SRR4302543.3871155/1‑94 (MQ=60)
TTTATCGTGTCAGACACACTCCCCGGGACAACACTTCCCGACGACAATCACGACCGCCCCTGGT‑GGGGCTGCCCTGCACCGTGACGCCCTGTTT < SRR4302543.91456/94‑1 (MQ=60)
TTTATCGTGTCAGACACACTCCCCGGGACAACACTTCCCGACGACAATCACGACCGCCCCTGGT‑GGGGCTGCCCTGCACCGTGACGCCCTGTTT < SRR4302543.3584800/94‑1 (MQ=60)
TTTATCGTGTCAGACACACTCCCCGGGACAACACTTCCCGACGACAATCACGACCGCCCCTGGT‑GGGGCTGCCCTGCACCGTGACGCCCTGTTT > SRR4302543.1959526/1‑94 (MQ=60)
TTTATCGTGTCAGACACACTCCCCGGGACAACACTTCCCGACGACAATCACGACCGCCCCTGGT‑GGGGCTGCCCTGCACCGTGACGCCCTGTTT > SRR4302543.7223977/1‑94 (MQ=60)
TTATCGTGTCAGACACACTCCCCGGGACAACACTTCCCGACGACAATCACGACCGCCCCTGGT‑GGGGCTGCCCTGCACCCTGACGCCCTGTTTC > SRR4302543.5612895/1‑94 (MQ=60)
TATCGTGTCAGACACCCTCCCCGGGACAACCCTTCCCGACGACAATCACGACCGCCCCTGGT‑GGGGCTGCCCTGCACCGTGACGCCCTGTTTCG < SRR4302543.2926407/94‑1 (MQ=60)
ATCGTGTCAGACACACTCCCCGGGACAACACTTCCCGACGACAATCACGACCGCCCCTGGT‑GGGGCTGCCCTGCACCGTGGCGCCCTGTTTCGG > SRR4302543.2022262/1‑94 (MQ=60)
ATCGTGTCAGACACACTCCCCGGGACAACACTTCCCGACGACAATCACGACCGCCCCTGGT‑GGGGCTGCCCTGCACCGTGACGCCCTcgttccg > SRR4302543.2022261/1‑87 (MQ=60)
ATCGTGTCAGACACACTCCCCGGGACAACACTTCCCGACGACAATCACGACCGCCCCTGGT‑GGGGCTGCCCTGCACCGTGACGCCCTGTTTCGG > SRR4302543.2773199/1‑94 (MQ=60)
CGTGTCAGACACACTCCCCGGGACAACACTTCCCGACGACAATCACGACCGCCCCTGGT‑GGGGCTGCCCTGCACCGTGACGCCCTGTTTCGGGG > SRR4302543.5962618/1‑94 (MQ=60)
CGTGTCAGACACACTCCCCGGGACAACACTTCCCGACGACAATCACGACCGCCCCTGGT‑GGGGCTGCCCTGCACCCTGACGCCCTGTTTCGGGG > SRR4302543.4896985/1‑94 (MQ=60)
GTCAGACACACTCCCCGGGACAACACTTCCCGACGACAATCACGACCGCCCCTGGT‑GGGGCTGCCCTGCACCGTGACGCCCTGTTTCGGGGCAC > SRR4302543.4177464/1‑94 (MQ=60)
GTCAGACACACTCCCCGGGACAACACTTCCCGACGACAATCACGACCGCCCCTGGT‑GGGGCTGCCCTGCACCGTGACGCCCTGTTTCGGGGCAC > SRR4302543.1818416/1‑94 (MQ=60)
gcgcCACACGCCCCGGGGCAACATTGCCCGACGACAATCACGACCGCCCCTGGT‑GGGGCTGCCCTGCACCGTGACGCCCTGTTTCGGGGCACGT < SRR4302543.1695309/90‑1 (MQ=60)
CAGACACACTCCCCGGGACAACACTTCCCGACGACAATCACGACCGCCCCTGGT‑GGGGCTGCCCTGCACCGTGCCGCCCTGTTTCGAGGCACGC > SRR4302543.3887324/1‑94 (MQ=60)
gaaccCACTCCCCGGGACACCACTTCCCGTCGCCAATCGCGACCGCCCCTGGT‑GGGGCTGCCCTGCACCGTGACGCCCTGTTTCGGGGCACGTC < SRR4302543.2575317/89‑1 (MQ=60)
AGACACCCTCCCCGGGACAACACTTCCCGACGACAATCACGACCGCCCCTGGT‑GGGGCTGCCCTGCACCGTGACGCCCTGTTTCGGGGCACGTC < SRR4302543.4606846/94‑1 (MQ=60)
AGACACACTCCCCGGGACAACACTTCCCGACGACAATCACGACCGCCCCTGGT‑GGGGCTGCCCTGCACCGTGACGCCCTGTTTCGGGGCACGTC > SRR4302543.6272705/1‑94 (MQ=60)
AGACACACTCCCCGGGACAACACTTCCCGACGACAATCACGACCGCCCCTGGT‑GGGGCTGCCCTGCACCGTGACGCCCTGTTTCGGGGCACGTC < SRR4302543.4606847/94‑1 (MQ=60)
AGACACACTCCCCGGGACAACACTTCCCGACGACAATCACGACCGCCCCTGGT‑GGGGCTGCCCTGCACCGTGACGCCCTGTTTCGGGGCACGTC < SRR4302543.2575318/94‑1 (MQ=60)
CACCCTCCCCGGGACAACACTTCCCGACGACAATCACGACCGCCCCTGGT‑GGGGCTGCCCTGCACCGTGACGCCCTGTTTCGGGGCACGTCTGG < SRR4302543.1483035/94‑1 (MQ=60)
CACACTCCCCGGGACAACACTTCCCGACGACAATCACGACCGCCCCTGGT‑GGGGCTGCCCTGCACCGTGACGCCCTGTTTCGGGGCACGTCTGG < SRR4302543.625346/94‑1 (MQ=60)
CACTCCCCGGGACAACACTTCCCGACGACAATCACGACCGCCCCTGGT‑GGGGCTGCCCTGCACCGTGACGCCCTGTTTCGGGGCACGTCTGGTG < SRR4302543.1072166/94‑1 (MQ=60)
CACTCCCCGGGACAACACTGCCCGACGACAATCACGACCGCCCCTGGT‑GGGGCTGCCCTGCACCGTGACGCCCTGTTTCGGGGCACGTCTGGTG < SRR4302543.1072162/94‑1 (MQ=60)
CTCCCCGGGACAACACTTCCCGACGACAATCACGACCGCCCCTGGT‑GGGGCTGCCCTGCACCGTGACGCCCTGTTTCGGGGCACGGCTGGTGCG > SRR4302543.2186210/1‑94 (MQ=60)
CCCCCCGGGACAACACTTCCCGACGAAAATCACGACCGCCCCTGGT‑GGGGCTGCCCTGCACCGTGACGCCCTGTTTCGGGGCACGTCTGGTGCA < SRR4302543.5570686/94‑1 (MQ=60)
CCCGGGACAACACTTCCCGACGACAATCACGACCGCCCCTGGT‑GGGGCTGCCCTGCACCGTGACGCCCTGTTTCGGGGCACGTCTGGTGCAGGA < SRR4302543.2908863/94‑1 (MQ=60)
CCCGGGACAACACTTCCCGACGACAATCACGACCGCCCCTGGT‑GGGGCTGCCCTGCACCGTGACGCCCTGTTTCGGGGCACGTCTGGTGCAGGA > SRR4302543.5147300/1‑94 (MQ=60)
CCGGGACAACACTTCCCGACGACAATCACGACCGCCCCTGGT‑GGGGCTGCCCTGCACCGTGACGCCCTGTTTCGGGGCACGTCTGGTGCAGGGG > SRR4302543.5705569/1‑94 (MQ=60)
CCGGGACAACACTTCCCGACGACAATCACGACCGCCCCTGGT‑GGGGCTGCCCTGCACCGTGACGCCCTGTTTCGGGGCACGTCTGGTGCAGGAG < SRR4302543.2997390/94‑1 (MQ=60)
CCGGGACAACACTTCCCGACGACAATCACGACCGCCCCTGGT‑GGGGCTGCCCTGCACCGTGACGCCCTGTTTCGGGGCACGTCTGGTGCAGGAG > SRR4302543.2357226/1‑94 (MQ=60)
CCGGGACAACACTTCCCGACGACAATCACGACCGCCCCTGGT‑GGGGCTGCCCTGCACCGTGACGCCCTGTTTCGGGGCACGTCTGGTGCAGGAG < SRR4302543.5173448/94‑1 (MQ=60)
CGGGACAACACTTCCCGACGACAATCACGACCGCCCCTGGT‑GGGGCTGCCCTGCACCGTGACGCCCTGTTTCGGGGCACGTCTGGTGCAGGAGG > SRR4302543.5375300/1‑94 (MQ=60)
CGGGACAACACTTCCCGACGACAATCACGACCGCCCCTGGT‑GGGGCTGCCCTGCACCGTGACGCCCTGTTTCGGGGCACGTCTGGTGCAGGAGG > SRR4302543.6278162/1‑94 (MQ=60)
GGGACAACACTTCCCGACGACAATCACGACCGCCCCTGGT‑GGGGCTGCCCTGCACCGTGACGCCCTGTTTCGGGGCACGTCTGGTGCAGGAGGG > SRR4302543.7082317/1‑94 (MQ=60)
GGGACAACACTTCCCGACGACAATCACGACCGCCCCTGGT‑GGGGCTGCCCTGCACCGTGACGCCCTGTTTCGGGGCACGTCTGGTGCAGGAGGG < SRR4302543.1398196/94‑1 (MQ=60)
GGGACAACACTTCCCGACGACAATCACGACCGCCCCTGGT‑GGGGCTGCCCTGCACCGTGACGCCCTGTTTCGGGGCACGTCTGGTGCAGGAGGG > SRR4302543.6787100/1‑94 (MQ=60)
GACAACACTTCCCGACGACAATCACGACCGCCCCTGGT‑GGGGCTGCCCTGCACCGTGACGCCCTGTTTCGGGGCACGTCTGGTGCAGGAGGGTA < SRR4302543.6638646/94‑1 (MQ=60)
ACAACACTTCCCGACGACAATCACGACCGCCCCTGGT‑GGGGCTGCCCTGCACCGTGACGCCCTGTTTCGGGGCACGTCTGGTGCAGGAGGGTAA > SRR4302543.3389375/1‑94 (MQ=60)
CAACACTTCCCGACGACAATCACGACCGCCCCTGGT‑GGGGCTGCCCTGCACCGTGACGCCCTGTTTCGGGGCACGTCTGGTGCAGGGGGGTAAC > SRR4302543.7179312/1‑94 (MQ=60)
CAACACTTCCCGACGACAATCACGACCGCCCCTGGT‑GGGGCTGCCCTGCACCGTGACGCCCTGTTTCGGGGCACGTCTGGTGCAGGAGGGTAAC > SRR4302543.7179313/1‑94 (MQ=60)
AACACTTCCCGACGACAATCACGACCGCCCCTGGT‑GGGGCTGCCCTGCACCGTGACGCCCTGTTTCGGGGCACGTCTGGTGCAGGGGGGGAACC > SRR4302543.2970493/1‑94 (MQ=60)
AACACTTCCCGACGACAATCACGACCGCCCCTGGT‑GGGGCTGCCCTGCACCGTGACGCCCTGTTTCGGGGCACGTCTGGTGCAGGAGGGTAACC < SRR4302543.1119089/94‑1 (MQ=60)
ACACTTCCCGACGACAATCACGACCGCCCCTGGT‑GGGGCTGCCCTGCACCGTGACGCCCTGTTTCGGGGCACGTCTGGTGCAGGAGGGGAACCG > SRR4302543.3140936/1‑94 (MQ=60)
CTTCCCGACGACAATCACGACCGCCCCTGGT‑GGGGCTGCCCTGCACCGTGACGCCCTGTTTCGGGGCACGTCTGGTGCAGGAGGGTAACCGGTT > SRR4302543.6246357/1‑94 (MQ=60)
CTTCCCGACGACAATCACGACCGCCCCTGGT‑GGGGCTGCCCTGCACCGTGACGCCCTGTTTCGGGGCACGTCTGGTGCAGGAGGGTAACCGGGT > SRR4302543.3375077/1‑94 (MQ=60)
CTTCCCGACGACAATCACGACCGCCCCTGGT‑GGGGCTGCCCTGCACCGTGACGCCCTGTTTCGGGGCACGTCTGGTGCAGGAGGGGAACCGGGT > SRR4302543.3454437/1‑94 (MQ=60)
CCCGACGACAATCACGACCGCCCCTGGT‑GGGGCTGCCCTGCACCGTGACGCCCTGTTTCGGGGCACGTCTGGTGCAGGAGGGTAACCGGTTGCA < SRR4302543.4686527/94‑1 (MQ=60)
CCGACGACAATCACGACCGCCCCTGGT‑GGGGCTGCCCTGCACCGTGACGCCCTGTTTCGGGGCACGTCTGGTGCAGGAGGGTAACCGGTTGCAT < SRR4302543.184316/94‑1 (MQ=60)
CCGACGACAATCACGACCGCCCCTGGT‑GGGGCTGCCCTGCACCGTGACGCCCTGTTTCGGGGCACGTCTGGTGCAGGAGGGTAACCGGTTGCAT < SRR4302543.4226763/94‑1 (MQ=60)
gccgcCAATCCCGACCGCCCCTGGT‑GGGGCTGCCCTGCACCGTGACGCCCTGTTTCGGGGCACGTCTGGTGCAGGAGGGTAACCGGTTGCATTA < SRR4302543.1496384/89‑1 (MQ=60)
GACGACAATCACGACCGCCCCTGGT‑GGGGCTGCCCTGCACCGTGACGCCCTGTTTCGGGGCACGTCTGGTGCAGGAGGGTAACCGGTTGCATTC > SRR4302543.6088692/1‑94 (MQ=60)
GACGACAATCACGACCGCCCCTGGT‑GGGGCTGCCCTGCACCGTGACGCCCTGTTTCGGGGCACGTCTGGTGCAGGAGGGTAACCGGTTGCATTA > SRR4302543.2579540/1‑94 (MQ=60)
GACGACAATCACGACCGCCCCTGGT‑GGGGCTGCCCTGCACCCTGACCCCCCGTTTCGCGGCACGTCCGGTGCAGGAGGGAAACCGGTTCCATCA > SRR4302543.6088693/1‑94 (MQ=57)
CGACAATCACGACCGCCCCTGGT‑GGGGCTGCCCTGCACCGTGACGCCCTGTTTCGGGGCACGTCTGGTGCAGGAGGGTAACCGGTTGCATTACC < SRR4302543.562993/94‑1 (MQ=60)
CGACAATCACGACCGCCCCTGGT‑GGGGCTGCCCTGCACCGTGACGCCCTGTTTCGGGGCACGTCTGGTGCAGGAGGGTAACCGGTTGCATTAAC > SRR4302543.4197299/1‑94 (MQ=60)
GACAATCACGACCGCCCCTGGT‑GGGGCTGCCCTGCACCGTGACGCCCTGTTTCGGGGCACGTCTGGTGCAGGAGGGTAACCGGTTGCATTACCT < SRR4302543.2819640/94‑1 (MQ=60)
ACAATCACGACCGCCCCTGGT‑GGGGCTGCCCTGCACCGTGACGCCCTGTTTCGGGGCACGTCTGGTGCAGGAGGGTAACCGGTTGCATTACCTT < SRR4302543.3872732/94‑1 (MQ=60)
CAATCACGACCGCCCCTGGT‑GGGGCTGCCCTGCACCGTGACGCCCTGTTTCGGGGCACGTCTGGTGCAGGAGGGTAACCGGTTGCATTACCTTG > SRR4302543.6738582/1‑94 (MQ=60)
CAATCACGACCGCCCCTGGT‑GGGGCTGCCCTGCACCGTGACGCCCTGTTTCGGGGCACGTCTGGTGCAGGAGGGTAACCGGTTGCATTACCTTG > SRR4302543.6738583/1‑94 (MQ=60)
CAATCACGACCGCCCCTGGT‑GGGGCTGCCCTGCACCGTGACGCCCTGTTTCGGGGCACGTCTGGTGCAGGAGGGGAACCGGTTGCATTTCCGTG > SRR4302543.2863592/1‑94 (MQ=60)
AATCACGACCGCCCCTGGT‑GGGGCTGCCCTGCACCGTGACGCCCTGTTTCGGGGCACGTCTGGTGCAGGAGGGTAACCGGTTGCATTACCTTGC < SRR4302543.5952368/94‑1 (MQ=60)
AATCACGACCGCCCCTGGT‑GGGGCTGCCCTGCACCGTGACGCCCTGTTTCGGGGCACGTCTGGGGCAGGAGGGTAACCGGGTGCATTACCTTGC > SRR4302543.1596418/1‑94 (MQ=60)
ATCACGACCGCCCCTGGT‑GGGGCTGCCCTGCACCGTGACGCCCTGTTTCGGGGCACGTCTGGTGCAGGAGGGTAACCGGTTGCATTACCTTGCC > SRR4302543.6776623/1‑94 (MQ=60)
TCACGACCGCCCCTGGT‑GGGGCTGCCCTGCACCGTGACGCCCTGTTTCGGGGCACGTCTGGTGCAGGAGGGTAACCGGTTGCATTACCTTGCCG < SRR4302543.6049594/94‑1 (MQ=60)
CACGACCGCCCCTGGTGGGGGCTGCCCTGCACCGTGACGCCCTGTTTCGGGGCACGTCTGGTTCAGGAGGGTAACCGGTTGCATTACCTTGCCG > SRR4302543.6556814/1‑94 (MQ=60)
CACGACCGCCCCTGGT‑GGGGCTGCCCTGCACCGTGACGCCCTGTTTCGGGGCACGTCTGGTGCAGGAGGGTAACCGGTTGCATTACCTTGCCGA < SRR4302543.1374579/94‑1 (MQ=60)
CACGACCGCCCCTGGT‑GGGGCTGCCCTGCACCGTGACGCCCTGTTTCGGGGCACGTCTGGTGCAGGAGGGTAACCGGGTGCATTACCTTGCCGA > SRR4302543.4677560/1‑94 (MQ=60)
ACGACCGCCCCTGGT‑GGGGCTGCCCTGCACCGTGACGCCCTGTTTCGGGGCACGTCTGGTGCAGGAGGGTAACCGGTTGCATTACCTTGCCGAC < SRR4302543.7820559/94‑1 (MQ=60)
CGACCGCCCCTGGT‑GGGGCTGCCCTGCACCGTGACGCCCTGTTTCGGGGCACGTCTGGTGCAGGAGGGTAACCGGTTGCATTACCTTGCCGACC < SRR4302543.6018340/94‑1 (MQ=60)
GACCGCCCCTGGT‑GGGGCTGCCCTGCACCGTGACGCCCTGTTTCGGGGCACGTCTGGTGCAGGAGGGTAACCGGTTGCATTACCTTGCCGACCG > SRR4302543.2277559/1‑94 (MQ=60)
GACCGCCCCTGGT‑GGGGCTGCCCTGCACCGTGACGCCCTGTTTCGGGGCACGTCTGGTGCAGGAGGGTAACCGGTTGCATTACCTTGCCGACCG < SRR4302543.7872259/94‑1 (MQ=60)
GACCGCCCCTGGT‑GGGGCTGCCCTGCACCGTGACGCCCTGTTTCGGGGCACGTCTGGTGCAGGAGGGGAACCGGTTGCATTACCTTGCCGACCG > SRR4302543.3285503/1‑94 (MQ=60)
GACCGCCCCTGGT‑GGGGCTGCCCTGCACCGTGACGCCCTGTTTCGGGGCACGTCTGGTGCAGGAGGGGAACCGGTTGCATTACCTTGCCGACCG > SRR4302543.2277558/1‑94 (MQ=60)
GCCGCCCCTGGT‑GGGGCTGCCCTGCACCGTGACGCCCTGTTTCGGGGCACGTCTGGTGCAGGAGGGTAACCGGTTGCATTACCTTGCCGACCGC < SRR4302543.7871661/94‑1 (MQ=60)
ACCGCCCCTGGT‑GGGGCTGCCCTGCACCGTGACGCCCTGTTTCGGGGCACGTCTGGTGCAGGAGGGTAACCGGTTGCATTACCTTGCCGACCGC < SRR4302543.7310387/94‑1 (MQ=60)
ACCGCCCCTGGT‑GGGGCTGCCCTGCACCGTGACGCCCTGTTTCGGGGCACGTCTGGTGCAGGAGGGTAACCGGTTGCATTACCTTGCCGACCCC > SRR4302543.1481356/1‑94 (MQ=60)
CCCTGGT‑GGGGCTGCCCTGCACCGTGACGCCCTGTTTCGGGGCACGTCTGGTGCAGGAGGGTAACCGGTTGCATTACCTTGCCGACCGCGCCGG > SRR4302543.7297124/1‑94 (MQ=60)
CCCTGGT‑GGGGCTGCCCTGCACCGTGACGCCCTGTTTCGGGGCACGTCTGGTGCAGGAGGGGAACCGGTTGCATTACCTTGCCGACCGCGCCGG > SRR4302543.4446935/1‑94 (MQ=60)
CCTGGT‑GGGGCTGCCCTGCACCGTGACGCCCTGTTTCGGGGCACGTCTGGTGCAGGAGGGTAACCGGTTGCATTACCTTGCCGACCGCGCCGGT < SRR4302543.6337486/94‑1 (MQ=60)
CCTGGT‑GGGGCTGCCCTGCACCGTGACGCCCTGTTTCGGGGCACGTCTGGTGCAGGAGGGTAACCGGTTGCATTACCTTGCCGACCGCGCCGGT > SRR4302543.1828953/1‑94 (MQ=60)
CCTGGT‑GGGGCTGCCCTGCACCGTGACGCCCTGTTTCGGGGCACGTCTGGTGCAGGAGGGTAACCGGTTGCATTACCTTGCCGACCGCGCCGGT > SRR4302543.3553845/1‑94 (MQ=60)
CCTGGT‑GGGGCTGCCCTGCACCGTGACGCCCTGTTTCGGGGCACGTCTGGTGCAGGAGGGGAACCGGTTGCATTACCTTGCCGACCGCGCCGGT > SRR4302543.5011147/1‑94 (MQ=60)
CTGGT‑GGGGCTGCCCTGCACCGTGACGCCCTGTTTCGGGGCACGTCTGGTGCAGGAGGGTAACCGGTTGCATTACCTTGCCGACCGCGCCGGTA > SRR4302543.7137627/1‑94 (MQ=60)
TGGT‑GGGGCTGCCCTGCACCGTGACGCCCTGTTTCGGGGCACGTCTGGTGCAGGAGGGTAACCGGTTGCATTACCTTGCCGACCGCGCCGGTAT > SRR4302543.4269298/1‑94 (MQ=60)
TGGT‑GGGGCTGCCCTGCACCGTGACGCCCTGTTTCGGGGCACGTCTGGTGCAGGAGGGGAACCGGGTGCATTACCTTGCCGACCGCGCCGGTAT > SRR4302543.4137459/1‑94 (MQ=60)
GGT‑GGGGCTGCCCTGCACCGTGACGCCCTGTTTCGGGGCACGTCTGGTGCAGGAGGGTAACCGGTTGCATTACCTTGCCGACCGCGCCGGTATC > SRR4302543.1002479/1‑94 (MQ=60)
TGGGGCTGCCCTGCACCGTGACGCCCTGTTTCGGGGCACGTCTGGTGCAGGAGGGTAACCGGTTGCATTACCTTGCCGACCGCGCCGGTATCAG > SRR4302543.154507/1‑94 (MQ=60)
TGGGGCTGCCCTGCACCGTGACGCCCTGTTTCGGGGCACGTCTGGTGCAGGAGGGTAACCGGTTGCATTACCTTGCCGACCGCGCCGGTATCAG > SRR4302543.5595796/1‑94 (MQ=60)
TGGGGCTGCCCTGCACCGTGACGCCCTGTTTCGGGGCACGTCTGGTGCAGGAGGGTAACCGGTTGCATTACCTTGCCGACCGCGCCGGTATCAG < SRR4302543.3467598/94‑1 (MQ=60)
TGGGGCTGCCCTGCACCGTGACGCCCTGTTTCGGGGCACGTCTGGTGCAGGAGGGTAACCGGTTGCATTACCTTGCCGACCGCGCCGGCATCAG > SRR4302543.2814899/1‑94 (MQ=60)
GGGGCTGCCCTGCACCGTGACGCCCTGTTTCGGGGCACGTCTGGTGCAGGAGGGTAACCGGTTGCATTACCTTGCCGACCGCGCCGGTATCAGA < SRR4302543.5671489/94‑1 (MQ=60)
GGGCTGCCCTGCACCGTGACGCCCTGTTTCGGGGCACGTCTGGTGCAGGAGGGTAACCGGTTGCATTACCTTGCCGACCGCGCCGGTATCAGAG < SRR4302543.6523190/94‑1 (MQ=60)
GGGCTGCCCTGCACCGTGACGCCCTGTTTCGGGGCACGTCTGGTGCAGGAGGGTAACCGGTTGCATTACCTTGCCGACCGCGCCGGTATCAGAG < SRR4302543.2812518/94‑1 (MQ=60)
GGCTGCCCTGCACCGTGACGCCCTGTTTCGGGGCACGTCTGGTGCAGGAGGGTAACCGGTTGCATTACCTTGCCGACCGCGCCGGTATCAGAGG > SRR4302543.7018065/1‑94 (MQ=60)
GCTGCCCTGCACCGTGACGCCCTGTTTCGGGGCACGTCTGGTGCAGGAGGGTAACCGGTTGCATTACCTTGCCGACCGCGCCGGTATCAGAGGC < SRR4302543.4102442/94‑1 (MQ=60)
|
GCCGATTTTCTGTAAGGATTTTATCGTGTCAGACACACTCCCCGGGACAACACTTCCCGACGACAATCACGACCGCCCCTGGTGGGGGCTGCCCTGCACCGTGACGCCCTGTTTCGGGGCACGTCTGGTGCAGGAGGGTAACCGGTTGCATTACCTTGCCGACCGCGCCGGTATCAGAGGC > NC_000913/2075109‑2075289
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 2 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
