Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I1 R1
|
1696 |
279.3 |
15874187 |
97.8% |
15524954 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
2,078,857 |
T→C |
Y143C (TAC→TGC) |
sbmC ← |
SbmC |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 2,078,857 | 0 | T | C | 100.0%
| 643.7
/ NA
| 205 | Y143C (TAC→TGC) | sbmC | SbmC |
| Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (100/105); total (100/105) |
Only 100 of 211 total aligned reads displayed.
AAAAAAAGAGTGGTCATCGCGTTAACACACCGCCCTGAGATGAATTAGTGATGTTTTGGCTGCACCGCAACATACATTTCGATATCCCAGTACCCATCTTCCGCGCCATTGTTCAAATAAACCTCGAAGCAGGGCTTTGGTAACATTTCATAAGCACTGTCCTGCAAGAGACTATTAAAG > NC_000913/2078767‑2078946
|
aaaaGAGTGGTCATCGCGTTAACACACCGCCCTGAGATGAATTAGTGATGTTTTGGCTGCACCGCAACATACATTTCGATATCCCAGCACCCa < 1:7682782/93‑1 (MQ=255)
aaaaGAGTGGTCATCGCGTTAACACACCGCCCTGAGATGAATTAGTGATGTTTTGGCTGCACCGCAACATACATTTAGATATCCCAGCACCCa > 1:203528/1‑93 (MQ=255)
aaaGAGTGGTCATCGCGTTAACACACCGCCCTGAGATGAATTAGTGATGTTTTGGCTGCACCGCAACATACATTTCGATATCCCAGCACCCAt > 1:924097/1‑93 (MQ=255)
aaGAGTGGTCATCGCGTTAACACACCGCCCTGAGATGAATTAGTGATGTTTTGGCTGCACCGCAACATACATTTCGATATCCCAGCACCCATc < 2:5190387/93‑1 (MQ=255)
aaGAGTGGTCATCGCGTTAACACACCGCCCTGAGATGAATTAGTGATGTTTTGGCTGCACCGCAACATACATTTCGATATCCCAGCACCCATc < 2:7017356/93‑1 (MQ=255)
aaGAGTGGTCATCGCGTTAACACACCGCCCTGAGAGGAATTAGTGATGTTTTGGCTGCACCGCAACATACATTTCGATATCCCAGCACCCATc > 1:1364741/1‑93 (MQ=255)
agagTGGTCATCGCGTTAACACACCGCCCTGAGATGAATTAGTGATGTTTTGGCTGCACCGCAACATACATTTCGATATCCCAGCACCCATCt < 1:453557/93‑1 (MQ=255)
agagTGGTCATCGCGTTAACACACCGCCCTGAGATGAATTAGTGATGTTTTGGCTGCACCGCAACATACATTTCGATATCCCAGCACCCATCt < 1:3573737/93‑1 (MQ=255)
gagTGGTCATCGCGTTAACACACCGCCCTGAGATGAATTAGTGATGTTTTGGCTGCACCGCAACATACATTTCGATATCCCAGCACCCATCtt > 2:3139139/1‑93 (MQ=255)
gagTGGTCATCGCGTTAACACACCGCCCTGAGATGAATTAGTGATGTTTTGGCTGCACCGCAACATACATTTCGATATCCCAGCACCCATCtt > 1:2949786/1‑93 (MQ=255)
tGGTCATCGCGTTAACACACCGCCCTGAGATGAATTAGTGATGTTTTGGCTGCACCGCAACATACATTTCGATATCCCAGCACCCATCTTCcg > 1:610854/1‑93 (MQ=255)
tCATCGCGTTAACACACCGCCCTGAGATGAATTAGTGATGTTTTGGCTGCACCGCAACATACATTTCGATATCCCAGCACCCATCTTCCgcgc > 2:6475082/1‑93 (MQ=255)
cgTTAACACACCGCCCTGAGATGAATTAGTGATGTTTTGGCTGCACCGCAACATACATTTCGATATCCCAGCACCCATCTTCCGCGCCATTGt < 2:657878/93‑1 (MQ=255)
cgTTAACACACCGCCCTGAGATGAATTAGTGATGTTTTGGCTGCACCGCAACATACATTTCGATATCCCAGCACCCATCTTCCGCGCCATTGt < 2:3843794/93‑1 (MQ=255)
cgTTAACACACCGCCCTGAGATGAATTAGTGATGTTTTGGCTGCACCGCAACATACATTTCGATATCCCAGCACCCATCTTCCGCGCCATTGt < 2:1838312/93‑1 (MQ=255)
gTTAACACACCGCCCTGAGATGAATTAGTGATGTTTTGGCTGCACCGCAACATACATTTCGATATCCCAGCACCCATCTTCCGCGCCATTGtt > 2:4092193/1‑93 (MQ=255)
gTTAACACACCGCCCTGAGATGAATTAGTGATGTTTTGGCTGCACCGCAACATACATTTCGATATCCCAGCACCCATCTTCCGCGCCATTGtt > 1:5087628/1‑93 (MQ=255)
gTTAACACACCGCCCTGAGATGAATTAGTGATGTTTTGGCTGCACCGCAACATACATTTCGATATCCCAGCACCCATCTTCCGCGCCATTGtt < 1:4733974/93‑1 (MQ=255)
ttAACACGCCGCCCTGAGATGAATTAGTGATGTTTTGGCTGCACCGCAACATACATTTCGATATCCCAGCACCCATCTTCCGCGCCATTGTTc > 1:3104739/1‑93 (MQ=255)
aaCACACCGCCCTGAGATGAATTAGTGATGTTTTGGCTGCACCGCAACATACATTTCGATATCCCAGCACCCATCTTCCGCGCCATTGTTCaa < 1:517038/93‑1 (MQ=255)
acacacCGCCCTGAGATGAATTAGTGATGTTTTGGCTGCACCGCAACATACATTTCGATATCCCAGCACCCATCTTCCGCGCCATTGTTCaaa > 1:2547387/1‑93 (MQ=255)
acacCGCCCTGAGATGAATTAGTGATGTTTTGGCTGCACCGCAACATACATTTCGATATCCCAGCACCCATCTTCCGCGCCATTGTTCAAATa > 1:1403463/1‑93 (MQ=255)
acCGCCCTGAGATGAATTAGTGATGTTTTGGCTGCACCGCAACATACATTTCGATATCCCAGCACCCATCTTCCGCGCCATTGTTCAAATaaa > 2:5233149/1‑93 (MQ=255)
ccGCCCTGAGATGAATTAGTGATGTTTTGGCTGCACCGCAACATACATTTCGATATCCCAGCACCCATCTTCCGCGCCATTGTTCAAATAAAc < 2:1652928/93‑1 (MQ=255)
cGCCCTGAGATGAATTAGTGATGTTTTGGCTGCACCGCAACATCCATTTCGATATCCCAGCACCCATCTTCCGCGCCATTGTTCAAATAAAcc < 1:6263759/93‑1 (MQ=255)
gCCCTGAGATGAATTAGTGATGTTTTGGCTGCACCGCAACATACATTTCGATATCCCAGCACCCATCTTCCGCGCCATTGTTCAAATAAACCt < 2:4724687/93‑1 (MQ=255)
gCCCTGAGATGAATTAGTGATGTTTTGGCTGCACCGCAACATACATTTCGATATCCCAGCACCCATCTTCCGCGCCATTGTTCAAATAAACCt < 1:513448/93‑1 (MQ=255)
cccTGAGATGAATTAGTGATGTTTTGGCTGCACCGCAACATACATTTCGATATCCCAGCACCCATCTTCCGCGCCATTGTTCAAATAAACCTc > 2:1356850/1‑93 (MQ=255)
ccTGAGATGAATTAGTGATGTTTTGGCTGCACCGCAACATACATTTCGATATCCCAGCACCCATCTTCCGCGCCATTGTTCAAATAAACCTCg > 2:3472685/1‑93 (MQ=255)
ccTGAGATGAATTAGTGATGTTTTGGCTGCACCGCAACATACATTTCGATATCCCAGCACCCATCTTCCGCGCCATTGTTCAAATAAACCTCg > 1:1643760/1‑93 (MQ=255)
ccTGAGATGAATTAGTGATGTTTTGGCTGCACCGCAACATACATTTCGATATCCCAGCACCCATCTTCCGCGCCATTGTTCAAATAAACCTCg > 1:1518308/1‑93 (MQ=255)
cTGAGATGAATTAGTGATGTTTTGGCTGCACCGCAACATACATTTCGATATCCCAGCACCCATCTTCCGCGCCATTGTTCAAATAAACCTCGa > 2:1495370/1‑93 (MQ=255)
cTGAGATGAATTAGTGATGTTTTGGCTGCACCGCAACATACATTTCGATATCCCAGCACCCATCTTCCGCGCCATTGTTCAAATAAACCTCGa < 1:1175994/93‑1 (MQ=255)
cTGAGATGAATTAGTGATGTTTTGGCTGCACCGCAACATACATTTCGATATCCCAGCACCCATCTTCCGCGCCATTGTTCAAATAAACCTCGa > 2:7561020/1‑93 (MQ=255)
tGAGATGAATTAGTGATGTTTTGGCTGCACCGCAACATACATTTCGATATCCCAGCACCCATCTTCCGCGCCATTGTTCAAATAAACCTCGaa > 2:2162727/1‑93 (MQ=255)
tGAGATGAATTAGTGATGTTTTGGCTGCACCGCAACATACATTTCGATATCCCAGCACCCATCTTCCGCGCCATTGTTCAAATAAACCTCGaa < 2:341906/93‑1 (MQ=255)
tGAGATGAATTAGTGATGTTTTGGCTGCACCGCAACATACATTTCGATATCCCAGCACCCATCTTCCGCGCCATTGTTCAAATAAACCTCGaa < 2:6215189/93‑1 (MQ=255)
tGAGATGAATTAGTGATGTTTTGGCTGCACCGCAACATACATTTCGATATCCCAGCACCCATCTTCCGCGCCATTGTTCAAATAAACCTCGaa < 1:3844837/93‑1 (MQ=255)
tGAGATGAATTAGTGACGTTTTGGCTGCACCGCAACATACATTTCGATATCCCAGCACCCATCTTCCGCGCCATTGTTCAAATAAACCTCGaa > 2:3934183/1‑93 (MQ=255)
gagaTGAATTAGTGATGTTTTGGCTGCACCGCAACATACATTTCGATATCCCAGCACCCATCTTCCGCGCCATTGTTCAAATAAACCTCGAAg > 1:4181544/1‑93 (MQ=255)
gagaTGAATTAGTGATGTTTTGGCTGCACCGCAACATACATTTCGATATCCCAGCACCCATCTTCCGCGCCATTGTTCAAATAAACCTCGAAg > 2:3689748/1‑93 (MQ=255)
gagaTGAATTAGTGATGTTTTGGCTGCACCGCAACATACATTTCGATATCCCAGCACCCATCTTCCGCGCCATTGTTCAAATAAACCTCGAAg > 2:6639006/1‑93 (MQ=255)
gaTGAATTAGTGATGTTTTGGCTGCACCGCAACATACATTTCGATATCCCAGCACCCATCTTCCGCGCCATTGTTCAAATAAACCTCGAAGCa > 1:1135894/1‑93 (MQ=255)
gaTGAATTAGTGATGTTTTGGCTGCACCGCAACATACATTTCGATATCCCAGCACCCATCTTCCGCGCCATTGTTCAAATAAACCTCGAAGCa < 1:5699952/93‑1 (MQ=255)
gaTGAATTAGTGATGTTTTGGCTGCACCGCAACATACATTTCGATATCCCAGCACCCATCTTCCGCGCCATTGTTCAAATAAACCTCGAAGCa < 1:369829/93‑1 (MQ=255)
aTGAATTAGTGATGTTTTGGCTGCACCGCAACATACATTTCGATATCCCAGCACCCATCTTCCGCGCCATTGTTCAAATAAACCTCGAAGCAg < 1:2863904/93‑1 (MQ=255)
aTGAATTAGTGATGTTTTGGCTGCACCGCAACATACATTTCGATATCCCAGCACCCATCTTCCGCGCCATTGTTCAAATAAACCTCGAAGCAg < 1:5859627/93‑1 (MQ=255)
tGAATTAGTGATGTTTTGGCTGCACCGCAACATACATTTCGATATCCCAGCACCCATCTTCCGCGCCATTGTTCAAATAAACCTCGAAGCAgg < 1:6906972/93‑1 (MQ=255)
tGAATTAGTGATGTTTTGGCTGCACCGCAACATACATTTCGATATCCCAGCACCCATCTTCCGCGCCATTGTTCAAATAAACCTCGAAGCAgg < 1:6979580/93‑1 (MQ=255)
gAATTAGTGATGTTTTGGCTGCACCGCAACATACATTTCGATATCCCAGCACCCATCTTCCGCGCCATTGTTCAAATAAACCTCGAAGCAggg < 2:5776539/93‑1 (MQ=255)
aaTTAGTGATGTTTTGGCTGCACCGCAACATACATTTCGATATCCCGGCACCCATCTTCCGCGCCATTGTTCAAATAAACCTCGAAGCAGGGc < 1:1784766/93‑1 (MQ=255)
aaTTAGTGATGTTTTGGCTGCACCGCAACATACATTTCGATATCCCAGCACCCATCTTCCGCGCCATTGTTCAAATAAACCTCGAAGCAGGGc < 1:186014/93‑1 (MQ=255)
aaTTAGTGATGTTTTGGCTGCACCGCAACATACATTTCGATATCCCAGCACCCATCTTCCGCGCCATTGTTCAAATAAACCTCGAAGCAGGGc > 1:6013081/1‑93 (MQ=255)
ttAGTGATGTTTTGGCTGCACCGCAACATACATTTCGATATCCCAGCACCCATCTTCCGCGCCATTGTTCAAATAAACCTCGAAGCAGGGCtt > 1:5543062/1‑93 (MQ=255)
tAGTGATGTTTTGGCTGCACCGCAACATACATTTCGATATCCCAGCACCCATCTTCCGCGCCATTGTTCAAATAAACCTCGAAGCAGGGCttt < 2:1796816/93‑1 (MQ=255)
aGTGATGTTTTGGCTGCACCGCAACATACATTTCGATATCCCAGCACCCATCTTCCGCGCCATTGTTCAAATAAACCTCGAAGCAGGGCTTTg < 1:2312547/93‑1 (MQ=255)
aGTGATGTTTTGGCTGCACCGCAACATACATTTCGATATCCCAGCACCCATCTTCCGCGCCATTGTTCAAATAAACCTCGAAGCAGGGCTTTg < 1:532901/93‑1 (MQ=255)
aGTGATGTTTTGGCTGCACCGCAACATACATTTCGATATCCCAGCACCCATCTTCCGCGCCATTGTTCAAATAAACCTCGAAGCAGGGCTTTg < 1:7161680/93‑1 (MQ=255)
gtgtTGTTTTGGCTGCACCGCAACATACATTTCGATATCCCAGCACCCATCGTCCGCGCCATTGTTCAAATAAACCTCGAAGCTGGGCTTTgg < 2:6960214/93‑1 (MQ=255)
gTGATGTTTTGGCTGCACCGCAACATACATTTCGATATCCCAGCACCCATCTTCCGCGCCATTGTTCAAATAAACCTCGAAGCAGGGCTTTgg < 2:6960007/93‑1 (MQ=255)
tGATGTTTTGGCTGCACCGCAACATACATTTCGATATCCCAGCACCCATCTTCCGCGCCATTGTTCAAATAAACCTCGAAGCAGGGCTTTGGt < 2:445000/93‑1 (MQ=255)
gATGTTTTGGCTGCACCGCAACATACATTTCGATATCCCAGCACCCATCTTCCGCGCCATTGTTCAAATAAACCTCGAAGCAGGGCTTTGGTa > 2:6899895/1‑93 (MQ=255)
aTGTTTTGGCTGCACCGCAACATACATTTCGATATCCCAGCACCCATCTTCCGCGCCATTGTTCAAATAAACCTTGAAGCAGGGCTTTGGTaa > 2:5450634/1‑93 (MQ=255)
tGTTTTGGCTGCACCGCAACATACATTTCGATATCCCAGCACCCATCTTCCGCGCCATTGTTCAAATAAACCTCGAAGCAGGGCTTTGGTAAc > 1:1159883/1‑93 (MQ=255)
tttGGCTGCACCGCAACATACATTTCGATATCCCAGCACCCATCTTCCGCGCCATTGTTCAAATAAACCTCGAAGCAGGGCTTTGGTAACAtt < 2:2543548/93‑1 (MQ=255)
ggCTGCACCGCAACATACATTTCGATATCCCAGCACCCATCTTCCGCGCCATTGTTCAAATAAACCTCGAAGCAGGGCTTTGGTAACATTTCa > 1:67493/1‑93 (MQ=255)
cTGCACCGCAACATACATTTCGATATCCCAGCACCCATCTTCCGCGCCATTGTTCAAATAAACCTCGAAGCAGGGCTTTGGTAACATTTCATa > 2:5646504/1‑93 (MQ=255)
tGCACCGCAACATACATTTCGATATCCCAGCACCCATCTTCCGCGCCATTGTTCAAATAAACCTCGAAGCAGGGCTTTGGTAACATTTCATaa < 1:5447641/93‑1 (MQ=255)
gCACCGCAACATACATTTCGATATCCCAGCACCCATCTTCCGCGCCATTGTTCAAATAAACCTCGAAGCAGGGCTTTGGTAACATTTCATAAg > 1:2457566/1‑93 (MQ=255)
cACCGCAACATACATTTCGATATCCCAGCACCCATCTTCCGCGCCATTGTTCAAATAAACCTCGAAGCAGGGCTTTGGTAACATTTCATAAGc < 2:5016452/93‑1 (MQ=255)
aCCGCAACATACATTTCGATATCCCAGCACCCATCTTCCGCGCCATTGTTCAAATAAACCTCGAAGCAGGGCTTTGGTAACATTTCATAAGCa > 2:6102107/1‑93 (MQ=255)
ccGCAACATACATTTCGATATCCCAGCACCCATCTTCCGCGCCATTGTTCAAATAAACCTCGAAGCAGGGCTTTGGTAACATTTCATAAGCAc < 2:3036827/93‑1 (MQ=255)
cGCAACATACATTTCGATATCCCAGCACCCATCTTCCGCGCCATTGTTCAAATAAACCTCGAAGCAGGGCTTTGGTAACATTTCATAAGCACt < 2:3602063/93‑1 (MQ=255)
cGCAACATACATTTCGATATCCCAGCACCCATCTTCCGCGCCATTGTTCAAATAAACCTCGAAGCAGGGCTTTGGTAACATTTCATAAGCACt > 1:6574661/1‑93 (MQ=255)
cAACATACATTTCGATATCCCAGCACCCATCTTCCGCGCCATTGTTCAAATAAACCTCGAAGCAGGGCTTTGGTAACATTTCATAAGCACTGt < 1:606826/93‑1 (MQ=255)
aaCATACATTTCGATATCCCAGCACCCATCTTCCGCGCCATTGTTCAAATAAACCTCGAAGCAGGGCTTTGGTAACATTTCATAAGCACTGTc < 1:2996320/93‑1 (MQ=255)
aaCATACATTTCGATATCCCAGCACCCATCTTCCGCGCCATTGTTCAAATAAACCTCGAAGCAGGGCTTTGGTAACATTTCATAAGCACTGTc < 2:1002301/93‑1 (MQ=255)
atacatTTCGATATCCCAGCACCCATCTTCCGCGCCATTGTTCAAATAAACCTCGAAGCAGGGCTTTGGTAACATTTCATAAGCACTGTCCTg < 2:1154589/93‑1 (MQ=255)
atacatTTCGATATCCCAGCACCCATCTTCCGCGCCATTGTTCAAATAAACCTCGAAGCAGGGCTTTGGTAACATTTCATAAGCACTGTCCTg > 1:7509095/1‑93 (MQ=255)
tacatTTCGATATCCCAGCACCCATCTTCCGCGCCATTGTTCAAATAAACCTCGAATCAGGGCTTTGGTAACATTTCATAAGCACTGTCCTGc > 2:7934885/1‑93 (MQ=255)
catTTCGATATCCCAGCACCCATCTTCCGCGCCATTGTTCAAATAAACCTCGAAGCAGGGCTTTGGTAACATTTCATAAGCACTGTCCTGCaa < 1:3395117/93‑1 (MQ=255)
ctttCGATATCCCAGCACCCATCTTCCGCGCCATTGTTCAAATAAACCTCGAAGCAGGGCTTTGGTAACATTTCATAAGCACTGTCCTGCAag < 1:2693852/92‑1 (MQ=255)
atTTCGATATCCCAGCACCCATCTTCCGCGCCATTGTTCAAATAAACCTCGAAGCAGGGCTTTGGTAACATTTCATAAGCACTGTCCTGCAag > 1:5726703/1‑93 (MQ=255)
tttCGATATCCCAGCACCCATCTTCCGCGCCATTGTTCAAATAAACCTCGAAGCAGGGCTTTGGTAACATTTCATACGCACTGTCCTGCAaga < 2:5217465/93‑1 (MQ=255)
tttCGATATCCCAGCACCCATCTTCCGCGCCATTGTTCAAATAAACCTCGAAGCAGGGCTTTGGTAACATTTCATAAGCACTGTCCTGCAaga < 1:6519829/93‑1 (MQ=255)
tttCGATATCCCAGCACCCATCTTCCGCGCCATTGTTCAAATAAACCTCGAAGCAGGGCTTTGGTAACATTTCATAAGCACTGTCCTGCAaga < 2:3530348/93‑1 (MQ=255)
tttCGATATCCCAGCACCCATCTCCCGCGCCATTGTTCAAATAAACCTCGAAGCAGGGCTTTGGTAACATTTCATAAGCACTGTCCTGCAaga < 2:4339210/93‑1 (MQ=255)
ttCGATATCCCAGCACCCATCTTCCGCGCCATTGTTCAAATAAACCTCGAAGCAGGGCTTTGGTAACATTTCATAAGCACTGTCCTGCAagag < 2:5840532/93‑1 (MQ=255)
tCGATATCCCAGCACCCATCTTCCGCGCCATTGTTCAAATAAACCTCGAAGCAGGGCTTTGGTAACATTTCATAAGCACTGTCCTGCAAgaga > 1:6224199/1‑93 (MQ=255)
tCGATATCCCAGCACCCATCTTCCGCGCCATTGTTCAAATAAACCTCGAAGCAGGGCTTTGGTAACATTTCATAAGCACTGTCCTGCAAgaga < 1:3720599/93‑1 (MQ=255)
cGATATCCCAGCACCCATCTTCCGCGCCATTGTTCAAATAAACCTCGAAGCAGGGCTTTGGTAACATTTCATAAGCACTGTCCTGCAAGAGAc < 2:3457521/93‑1 (MQ=255)
gATATCCCAGCACCCATCTTCCGCGCCATTGTTCAAATAAACCTCGAAGCAGGGCTTTGGTAACATTTCATAAGCACTGTCCTGCAAGAGACt > 2:6779319/1‑93 (MQ=255)
gATATCCCAGCACCCATCTTCCGCGCCATTGTTCAAATAAACCTCGAAGCAGGGCTTTGGTAACATTTCATAAGCACTGTCCTGCAAGAGACt > 2:7382770/1‑93 (MQ=255)
ctatCCCCGCACCCATCTTCCGCGCCATTGTTCAAATAACCCTCGAAGCAGGGCTTTGGTAACATTTCATAAGCACTGTCCTGCAAGAGACTa < 1:1597995/92‑1 (MQ=255)
atatCCCAGCACCCATCTTCCGCGCCATTGTTCAAATAAACCACGAAGCAGGGCTTTGGTAACATTTCATAAGCACTGTCCTGCAAGAGACTa < 2:6762202/93‑1 (MQ=255)
tCCCAGCACCCATCTTCCGCGCCATTGTTCAAATAAACCTCGAAGCAGGGCTTTGGTAACATTTCATAAGCACTGTCCTGCAAGAGACTATTa < 1:3728032/93‑1 (MQ=255)
tCCCAGCACCCATCTTCCGCGCCATTGTTCAAATAAACCTCGAAGCAGGGCTTTGGTAACATTTCATAAGCACTGTCCTGCAAGAGACTATTa > 2:5882614/1‑93 (MQ=255)
tCCCAGCACCCATCTTCCGCGCCATTGTTCAAATAAACCTCGAAGCAGGGCTTTGGTAACATTTCATAAGCACTGTCCTGCAAGAGACTATTa > 2:4615961/1‑93 (MQ=255)
ccAGCACCCATCTTCCGCGCCATTGTTCAAATAAACCTCGAAGCAGGGCTTTGGTAACATTTCATAAGCACTGTCCTGCAAGAGACTATTaaa < 2:2006690/93‑1 (MQ=255)
cAGCACCCATCTTCCGCGCCATTGTTCAAATAAACCTCGAAGCAGGGCTTTGGTAACATTTCATAAGCACTGTCCTGCAAGAGACTATTAAAg > 2:207161/1‑93 (MQ=255)
|
AAAAAAAGAGTGGTCATCGCGTTAACACACCGCCCTGAGATGAATTAGTGATGTTTTGGCTGCACCGCAACATACATTTCGATATCCCAGTACCCATCTTCCGCGCCATTGTTCAAATAAACCTCGAAGCAGGGCTTTGGTAACATTTCATAAGCACTGTCCTGCAAGAGACTATTAAAG > NC_000913/2078767‑2078946
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
TCAAAAAAAAGAGTGGTCATCGCGTTAACACACCGCCCTGAGATGAATTAGTGATGTTTTGGCTGCACCGCAACATACATTTCGATATCCCAGTACCCATCTTCCGCGCCATTGTTCAAATAAACCTCGAAGCAGGGCTTTGGTAACATTTCATAAGCACTGTCCTGCAAGAGACTATTAAAGAAC > NC_000913/2078764‑2078949
|
TCAAAAAAAAGAGTGGTCACCGCGTTAACACACCGCCCTGAGATGAATTAGTGATGTTTTGGCTGCACCGCAACATACATTTCGATATCCCAGC < SRR4302543.7665897/94‑1 (MQ=60)
AAAAAAGAGTGGTCATCGCGTTAACACACCGCCCTGAGATGAATTAGTGATGTTTTGGCTGCACCGCAACATACATTTCGATATCCCAGCACCC > SRR4302543.5756562/1‑94 (MQ=60)
AAAAAGAGTGGTCATCGCGTTAACACGCCGCCCTGAGATGAATTAGTGATGTTTTGGCTGCACCGCAACATACATTTCGATATCCCAGCACCCA > SRR4302543.2234002/1‑94 (MQ=60)
AAAAAGAGTGGTCATCGCGTTAACACACCGCCCTGAGATGAATTAGTGATGTTTTGGCTGCACCGCAACATACATTTCGATATCCCAGCACCCA < SRR4302543.3469418/94‑1 (MQ=60)
AAAAAGAGTGGTCATCGCGTTAACACACCGCCCTGAGATGAATTAGTGATGTTTTGGCTGCACCGCAACATACATTTAGATATCCCAGCACCCA > SRR4302543.205244/1‑94 (MQ=60)
AAAAGAGTGGTCATCGCGTTAACACACCGCCCTGAGATGAATTAGTGATGTTTTGGCTGCACCGCAACATACATTTCGATATCCCAGCACCCAT > SRR4302543.932183/1‑94 (MQ=60)
AAAAGAGTGGTCATCGCGTTAACACACCGCCCTGAGATGAATTAGTGATGTTTTGGCTGCACCGCAACATACATTTCGATATCCCAGCACCCAT < SRR4302543.7755556/94‑1 (MQ=60)
AAAAGAGTGGTCATCGCGTTAACACACCGCCCTGAGATGAATTAGTGATGTTTTGGCTGCACCGCAACATACATTTCGATATCCCAGCACCCAT < SRR4302543.3646698/94‑1 (MQ=60)
AAAGAGTGGTCATCGCGTTAACACACCGCCCTGAGAGGAATTAGTGATGTTTTGGCTGCACCGCAACATACATTTCGATATCCCAGCACCCATC > SRR4302543.1376969/1‑94 (MQ=60)
AGAGTGGTCATCGCGTTAACACACCGCCCTGAGATGAATTAGTGATGTTTTGGCTGCACCGCAACATACATTTCGATATCCCAGCACCCATCTT > SRR4302543.2976566/1‑94 (MQ=60)
AGAGTGGTCATCGCGTTAACACACCGCCCTGAGATGAATTAGTGATGTTTTGGCTGCACCGCAACATACATTTCGATATCCCAGCACCCATCTT < SRR4302543.3605324/94‑1 (MQ=60)
AGAGTGGTCATCGCGTTAACACACCGCCCTGAGATGAATTAGTGATGTTTTGGCTGCACCGCAACATACATTTCGATATCCCAGCACCCATCTT > SRR4302543.4279977/1‑94 (MQ=60)
AGAGTGGTCATCGCGTTAACACACCGCCCTGAGATGAATTAGTGATGTTTTGGCTGCACCGCAACATACATTTCGATATCCCAGCACCCATCTT < SRR4302543.457783/94‑1 (MQ=60)
AGTGGTCATCGCGTTAACACACCGCCCTGAGATGAATTAGTGATGTTTTGGCTGCACCGCAACATACATTTCGATATCCCAGCACCCATCTTCC < SRR4302543.1180332/94‑1 (MQ=60)
GTGGTCATCGCGTTAACACACCGCCCTGAGATGAATTAGTGATGTTTTGGCTGCACCGCAACATACATTTCGATATCCCAGCACCCATCTTCCG > SRR4302543.616433/1‑94 (MQ=60)
GTCATCGCGTTAACACACCGCCCTGAGATGAATTAGTGATGTTTTGGCTGCACCGCAACATACATTTCGATATCCCAGCACCCATCTTCCGCGC < SRR4302543.5114059/94‑1 (MQ=60)
GTCATCGCGTTAACACACCGCCCTGAGATGAATTAGTGATGTTTTGGCTGCACCGCAACATACATTTCGATATCCCAGCACCCATCTTCCGCGC > SRR4302543.7625523/1‑94 (MQ=60)
GCGTTAACACACCGCCCTGAGATGAATTAGTGATGTTTTGGCTGCACCGCAACATACATTTCGATATCCCAGCACCCATCTTCCGCGCCATTGT < SRR4302543.145815/94‑1 (MQ=60)
GCGTTAACACACCGCCCTGAGATGAATTAGTGATGTTTTGGCTGCACCGCAACATACATTTCGATATCCCAGCACCCATCTTCCGCGCCATTGT < SRR4302543.520040/94‑1 (MQ=60)
CGTTAACACACCGCCCTGAGATGAATTAGTGATGTTTTGGCTGCACCGCAACATACATTTCGATATCCCAGCACCCATCTTCCGCGCCATTGTT > SRR4302543.5961103/1‑94 (MQ=60)
CGTTAACACACCGCCCTGAGATGAATTAGTGATGTTTTGGCTGCACCGCAACATACATTTCGATATCCCAGCACCCATCTTCCGCGCCATTGTT > SRR4302543.5133745/1‑94 (MQ=60)
GTTAACACGCCGCCCTGAGATGAATTAGTGATGTTTTGGCTGCACCGCAACATACATTTCGATATCCCAGCACCCATCTTCCGCGCCATTGTTC > SRR4302543.3132670/1‑94 (MQ=60)
GTTAACACGCCGCCCTGAGATGAATTAGTGATGTTTTGGCTGCACCGCAACATACATTTCGATATCCCAGCACCCATCTTCCGCGCCATTGTTC > SRR4302543.3132669/1‑94 (MQ=60)
GTTAACACACCGCCCTGAGATGAATTAGTGATGTTTTGGCTGCACCGCAACATACATTTCGATATCCCAGCACCCATCTTCCGCGCCATTGTTC < SRR4302543.4777237/94‑1 (MQ=60)
AACACGCCGCCCTGAGATGAATTAGTGATGTTTTGGCTGCACCGCAACATACATTTCGATATCCCAGCACCCATCTTCCGCGCCATTGTTCAAA > SRR4302543.2909656/1‑94 (MQ=60)
AACACACCGCCCTGAGATGAATTAGTGATGTTTTGGCTGCACCGCAACATACATTTCGATATCCCAGCACCCATCTTCCGCGCCATTGTTCAAA > SRR4302543.2570629/1‑94 (MQ=60)
AACACACCGCCCTGAGATGAATTAGTGATGTTTTGGCTGCACCGCAACATACATTTCGATATCCCAGCACCCATCTTCCGCGCCATTGTTCAAA < SRR4302543.521837/94‑1 (MQ=60)
CACACCGCCCTGAGATGAATTAGTGATGTTTTGGCTGCACCGCAACATACATTTCGATATCCCAGCACCCATCTTCCGCGCCATTGTTCAAATA < SRR4302543.7987593/94‑1 (MQ=60)
CACACCGCCCTGAGATGAATTAGTGATGTTTTGGCTGCACCGCAACATACATTTCGATATCCCAGCACCCATCTTCCGCGCCATTGTTCAAATA > SRR4302543.1416132/1‑94 (MQ=60)
ACACCGCCCTGAGATGAATTAGTGATGTTTTGGCTGCACCGCAACATACATTTCGATATCCCAGCACCCATCTTCCGCGCCATTGTTCAAATAA < SRR4302543.4065237/94‑1 (MQ=60)
ACACCGCCCTGAGATGAATTAGTGATGTTTTGGCTGCACCGCAACATACATTTCGATATCCCAGCACCCATCTTCCGCGCCATTGTTCAAATAA > SRR4302543.5416838/1‑94 (MQ=60)
ACCGCCCTGAGATGAATTAGTGATGTTTTGGCTGCACCGCAACATACATTTCGATATCCCAGCACCCATCTTCCGCGCCATTGTTCAAATAAAC > SRR4302543.6706822/1‑94 (MQ=60)
CGNCCTGAGATGAATTAGTGANNTTTTGGCTGCACCGCAACATACATTTCGATATCCCAGCACCCATCTTCCGCGCCATTGTTCAAATAAACCT < SRR4302543.628327/94‑1 (MQ=60)
CGCCCTGAGATGAATTAGTGATGTTTTGGCTGCACCGCAACATCCATTTCGATATCCCAGCACCCATCTTCCGCGCCATTGTTCAAATAAACCT < SRR4302543.6322822/94‑1 (MQ=60)
GCCCTGAGATGAATTAGTGATGTTTTGGCTGCACCGCAACATACATTTCGATATCCCAGCACCCATCTTCCGCGCCATTGTTCAAATAAACCTC < SRR4302543.5786288/94‑1 (MQ=60)
GCCCTGAGATGAATTAGTGATGTTTTGGCTGCACCGCAACATACATTTCGATATCCCAGCACCCATCTTCCGCGCCATTGTTCAAATAAACCTC < SRR4302543.518222/94‑1 (MQ=60)
GCCCTGAGATGAATTAGTGATGTTTTGGCTGCACCGCAACATACATTTCGATATCCCAGCACCCATCTTCCGCGCCATTGTTCAAATAAACCTC < SRR4302543.139180/94‑1 (MQ=60)
CCCTGAGATGAATTAGTGATGTTTTGGCTGCACCGCAACATACATTTCGATATCCCAGCACCCATCTTCCGCGCCATTGTTCAAATAAACCTCG > SRR4302543.7027248/1‑94 (MQ=60)
CCCTGAGATGAATTAGTGATGTTTTGGCTGCACCGCAACATACATTTCGATATCCCAGCACCCATCTTCCGCGCCATTGTTCAAATAAACCTCG > SRR4302543.1658436/1‑94 (MQ=60)
CCCTGAGATGAATTAGTGATGTTTTGGCTGCACCGCAACATACATTTCGATATCCCAGCACCCATCTTCCGCGCCATTGTTCAAATAAACCTCG < SRR4302543.157444/94‑1 (MQ=60)
CCCTGAGATGAATTAGTGATGTTTTGGCTGCACCGCAACATACATTTCGATATCCCAGCACCCATCTTCCGCGCCATTGTTCAAATAAACCTCG > SRR4302543.1531942/1‑94 (MQ=60)
CCTGAGATGAATTAGTGATGTTTTGGCTGCACCGCAACATACATTTCGATATCCCAGCACCCATCTTCCGCGCCATTGTTCAAATAAACCTCGA > SRR4302543.2339756/1‑94 (MQ=60)
CTGAGATGAATTAGTGATGTTTTGGCTGCACCGCAACATACATTTCGATATCCCAGCACCCATCTTCCGCGCCATTGTTCAAATAAACCTCGAA < SRR4302543.3421247/94‑1 (MQ=60)
CTGAGATGAATTAGTGATGTTTTGGCTGCACCGCAACATACATTTCGATATCCCAGCACCCATCTTCCGCGCCATTGTTCAAATAAACCTCGAA < SRR4302543.1186644/94‑1 (MQ=60)
TGAGATGAATTAGTGATGTTTTGGCTGCACCGCAACATACATTTCGATATCCCAGCACCCATCTTCCGCGCCATTGTTCAAATAAACCTCGAAG > SRR4302543.4219436/1‑94 (MQ=60)
TGAGATGAATTAGTGATGTTTTGGCTGCACCGCAACATACATTTCGATATCCCAGCACCCATCTTCCGCGCCATTGTTCAAATAAACCTCGAAG < SRR4302543.3878790/94‑1 (MQ=60)
AGATGAATTAGTGATGTTTTGGCTGCACCGCAACATACATTTCGATATCCCAGCACCCATCTTCCGCGCCATTGTTCAAATAAACCTCGAAGCA > SRR4302543.1146220/1‑94 (MQ=60)
GATGAATTAGTGATGTTTTGGCTGCACCGCAACATACATTTCGATATCCCAGCACCCATCTTCCGCGCCATTGTTCAAATAAACCTCGAAGCAG < SRR4302543.5751944/94‑1 (MQ=60)
GATGAATTAGTGATGTTTTGGCTGCACCGCAACATACATTTCGATATCCCAGCACCCATCTTCCGCGCCATTGTTCAAATAAACCTCGAAGCAG < SRR4302543.373236/94‑1 (MQ=60)
GATGAATTAGTGATGTTTTGGCTGCACCGCAACATACATTTCGATATCCCAGCACCCATCTTCCGCGCCATTGTTCAAATAAACCTCGAAGCAG < SRR4302543.373235/94‑1 (MQ=60)
GATGAATTAGTGATGTTTTGGCTGCACCGCAACATACATTTCGATATCCCAGCACCCATCTTCCGCGCCATTGTTCAAATAAACCTCGAAGCAG > SRR4302543.1841844/1‑94 (MQ=60)
ATGAATTAGTGATGTTTTGGCTGCACCGCAACATACATTTCGATATCCCAGCACCCATCTTCCGCGCCATTGTTCAAATAAACCTCGAAGCAGG < SRR4302543.5912961/94‑1 (MQ=60)
ATGAATTAGTGATGTTTTGGCTGCACCGCAACATACATTTCGATATCCCAGCACCCATCTTCCGCGCCATTGTTCAAATAAACCTCGAAGCAGG < SRR4302543.5980549/94‑1 (MQ=60)
ATGAATTAGTGATGTTTTGGCTGCACCGCAACATACATTTCGATATCCCAGCACCCATCTTCCGCGCCATTGTTCAAATAAACCTCGAAGCAGG < SRR4302543.2890010/94‑1 (MQ=60)
TGAATTAGTGATGTTTTGGCTGCACCGCAACATACATTTCGATATCCCAGCACCCATCTTCCGCGCCATTGTTCAAATAAACCTCGAAGCAGGG < SRR4302543.7045266/94‑1 (MQ=60)
TGAATTAGTGATGTTTTGGCTGCACCGCAACATACATTTCGATATCCCAGCACCCATCTTCCGCGCCATTGTTCAAATAAACCTCGAAGCAGGG < SRR4302543.6971880/94‑1 (MQ=60)
TGAATTAGTGATGTTTTGGCTGCACCGCAACATACATTTCGATATCCCAGCACCCATCTTCCGCGCCATTGTTCAAATAAACCTCGAAGCAGGG < SRR4302543.6626202/94‑1 (MQ=60)
GAATTAGTGATGTTTTGGCTGCACCGCAACATACATTTCGATATCCCAGCACCCATCTTCCGCGCCATTGTTCAAATAAACCTCGAAGCAGGGC > SRR4302543.6068616/1‑94 (MQ=60)
AATTAGTGATGTTTTGGCTGCACCGCAACATACATTTCGATATCCCGGCACCCATCTTCCGCGCCATTGTTCAAATAAACCTCGAAGCAGGGCT < SRR4302543.1800721/94‑1 (MQ=60)
AATTAGTGATGTTTTGGCTGCACCGCAACATACATTTCGATATCCCAGCACCCATCTTCCGCGCCATTGTTCAAATAAACCTCGAAGCAGGGCT < SRR4302543.187594/94‑1 (MQ=60)
ATTAGTGATGTTTTGGCTGCACCGCAACATACATTTCGATATCCCAGCACCCATCTTCCGCGCCATTGTTCAAATAAACCTCGAAGCAGGGCTT > SRR4302543.5593459/1‑94 (MQ=60)
TAGTGATGTTTTGGCTGCACCGCAACATACATTTCGATATCCCAGCACCCATCTTCCGCGCCATTGTTCAAATAAACCTCGAAGCAGGGCTTTG < SRR4302543.1796460/94‑1 (MQ=60)
AGTGATGTTTTGGCTGCACCGCAACATACATTTCGATATCCCAGCACCCATCTTCCGCGCCATTGTTCAAATAAACCTCGAAGCAGGGCTTTGG < SRR4302543.7231260/94‑1 (MQ=60)
AGTGATGTTTTGGCTGCACCGCAACATACATTTCGATATCCCAGCACCCATCTTCCGCGCCATTGTTCAAATAAACCTCGAAGCAGGGCTTTGG < SRR4302543.537837/94‑1 (MQ=60)
AGTGATGTTTTGGCTGCACCGCAACATACATTTCGATATCCCAGCACCCATCTTCCGCGCCATTGTTCAAATAAACCTCGAAGCAGGGCTTTGG < SRR4302543.2333583/94‑1 (MQ=60)
TGATGTTTTGGCTGCACCGCAACATACATTTCGATATCCCAGCACCCATCTTCCGCGCCATTGTTCAAATAAACCTCGAAGCAGGGCTTTGGTA < SRR4302543.1903619/94‑1 (MQ=60)
ATGTTTTGGCTGCACCGCAACATACATTTCGATATCCCAGCACCCATCTTCCGCGCCATTGTTCAAATAAACCTCGCAGCAGGGCTTTGGTAAC > SRR4302543.6887545/1‑94 (MQ=60)
ATGTTTTGGCTGCACCGCAACATACATTTCGATATCCCAGCACCCATCTTCCGCGCCATTGTTCAAATAAACCTCGAAGCAGGGCTTTGGTAAC > SRR4302543.1170446/1‑94 (MQ=60)
TGTTTTGGCTGCACCGCAACATACATTTCGATATCCCAGCACCCATCTTCCGCGCCATTGTTCAAATAAACCTCGAAGCAGGGCTTTGGTAACA < SRR4302543.7366088/94‑1 (MQ=60)
TGTTTTGGCTGCACCGCAACATACATTTCGATATCCCAGCACCCATCTTCCGCGCCATTGTTCAAATAAACCTCGAAGCAGGGCTTTGGTAACA > SRR4302543.960423/1‑94 (MQ=60)
GTTTTGGCTGCACCGCAACATACATTTCGATATCCCAGCACCCATCTTCCGCGCCATTGTTCAAATAAACCTCGAAGCAGGGCTTTGGTAACAT > SRR4302543.6981893/1‑94 (MQ=60)
GTTTTGGCTGCACCGCAACATACATTTCGATATCCCAGCACCCATCTTCCGCGCCATTGTTCAAATAAACCTCGAAGCAGGGCTTTGGTAACAT > SRR4302543.2535339/1‑94 (MQ=60)
TTTTGGCTGCACCGCAACATACATTTCGATATCCCAGCACCCATCTTCCGCGCCATTGTTCAAATAAACCTCGAAGCAGGGCTTTGGTAACATT < SRR4302543.5541805/94‑1 (MQ=60)
TGGCTGCACCGCAACATACATTTCGATATCCCAGCACCCATCTTCCGCGCCATTGTTCAAATAAACCTCGAAGCAGGGCTTTGGTAACATTTCA > SRR4302543.68095/1‑94 (MQ=60)
GGCTGCACCGCAACATACATTTCGATATCCCAGCACCCATCTTCCGCGCCATTGTTCAAATAAACCTCGAAGCAGGGCTTTGGTAACATTTCAT < SRR4302543.6547183/94‑1 (MQ=60)
CTGCACCGCAACATTCATTTCGATATCCCAGCACCCATCTTCCGCGCCATTGTTCAAATAAACCTCGAAGCAGGGCTTTGGTAACATTTCATAA < SRR4302543.5661383/94‑1 (MQ=60)
CTGCACCGCAACATACATTTCGATATCCCAGCACCCATCTTCCGCGCCATTGTTCAAATAAACCTCGAAGCAGGGCTTTGGTAACATTTCATAA < SRR4302543.1157653/94‑1 (MQ=60)
TGCACCGCAACATACATTTCGATATCCCAGCACCCATCTTCCGCGCCATTGTTCAAATAAACCTCGAAGCAGGGCTTTGGTAACATTTCATAAG > SRR4302543.3013776/1‑94 (MQ=60)
TGCACCGCAACATACATTTCGATATCCCAGCACCCATCTTCCGCGCCATTGTTCAAATAAACCTCGAAGCAGGGCTTTGGTAACATTTCATAAG > SRR4302543.2479725/1‑94 (MQ=60)
TGCACCGCAACATACATTTCGATATCCCAGCACCCATCTTCCGCGCCATTGTTCAAATAAACCTCGAAGCAGGGCTTTGGTAACATTTCATAAG < SRR4302543.5497068/94‑1 (MQ=60)
CACCGCAACATACATTTCGATATCCCAGCACCCATCTTCCGCGCCATTGTTCAAATAAACCTCGAAGCAGGGCTTTGGTAACATTTCATAAGCA > SRR4302543.2650973/1‑94 (MQ=60)
ACCGCAACATACATTTCGATATCCCAGCACCCATCTTCCGCGCCATTGTTCAAATAAACCTCGAAGCAGGGCTTTGGTAACATTTCATAAGCAC > SRR4302543.2005697/1‑94 (MQ=60)
CCGCAACATACATTTCGATATCCCAGCACCCATCTTCCGCGCCATTGTTCAAATAAACCTCGAAGCAGGGCTTTGGTAACATTTCATAAGCACT > SRR4302543.6636565/1‑94 (MQ=60)
CGCAACATACATTTCGATATCCCAGCACCCATCTTCCGCGCCATTGTTCAAATAAACCTCGAAGCAGGGCTTTGGTAACATTTCATAAGCACTG < SRR4302543.1613262/94‑1 (MQ=60)
CGCAACATACATTTCGATATCCCAGCACCCATCTTCCGCGCCATTGTTCAAATAAACCTCGAAGCAGGGCTTTGGTAACATTTCATAAGCACTG < SRR4302543.6081466/94‑1 (MQ=60)
GCAACATACATTTCGATATCCCAGCACCCATCTTCCGCGCCATTGTTCAAATAAACCTCGAAGCAGGGCTTTGGTAACATTTCATAAGCACTGT > SRR4302543.5134917/1‑94 (MQ=60)
CAACATACATTTCGATATCCCAGCACCCATCTTCCGCGCCATTGTTCAAATAAACCTCGAAGCAGGGCTTTGGTAACATTTCATAAGCACTGTC < SRR4302543.612371/94‑1 (MQ=60)
AACATACATTTCGATATCCCAGCACCCATCTTCCGCGCCATTGTTCAAATAAACCTCGAAGCAGGGCTTTGGTAACATTTCATAAGCACTGTCC > SRR4302543.2848873/1‑94 (MQ=60)
AACATACATTTCGATATCCCAGCACCCATCTTCCGCGCCATTGTTCAAATAAACCTCGAAGCAGGGCTTTGGTAACATTTCATAAGCACTGTCC < SRR4302543.3023505/94‑1 (MQ=60)
ACATACATTTCGATATCCCAGCACCCATCTTCCGCGCCATTGTTCAAATAAACCTCGAAGCAGGGCTTTGGTAACATTTCATAAGCACTGTCCT > SRR4302543.6213640/1‑94 (MQ=60)
CATACATTTCGATATCCCAGCACCCATCTTCCGCGCCATTGTTCAAATAAACCTCGAAGCAGGGCTTTGGTAACATTTCATAAGCACTGTCCTG > SRR4302543.7580847/1‑94 (MQ=60)
ATACATTTCGATATCCCAGCACCCATCTTCCGCGCCATTGTTCAAATAAACCTCGAAGCAGGGCTTTGGTAACATTTCATAAGCACTGTCCTGC > SRR4302543.4735841/1‑94 (MQ=60)
CATTTCGATATCCCAGCACCCATCTTCCGCGCCATTGTTCAAATAAACCTCGAAGCAGGGCTTTGGTAACATTTCATAAGCACTGTCCTGCAAG < SRR4302543.5116560/94‑1 (MQ=60)
CATTTCGATATCCCAGCACCCATCTTCCGCGCCATTGTTCAAATAAACCTCGAAGCAGGGCTTTGGTAACATTTCATAAGCACTGTCCTGCAAG < SRR4302543.3425555/94‑1 (MQ=60)
CATTTCGATATCCCAGCACCCATCTTCCGCGCCATTGTTCAAATAAACCTCGAAGCAGGGCTTTGGTAACATTTCATAAGCACTGTCCTGCAAG > SRR4302543.3862623/1‑94 (MQ=60)
CATTTCGATATCCCAGCACCCATCTTCCGCGCCATTGTTCAAATAAACCTCGAAGCAGGGCTTTGGTAACATTTCATAAGCACTGTCCTGCAAG > SRR4302543.5778958/1‑94 (MQ=60)
CTTTCGATATCCCAGCACCCATCTTCCGCGCCATTGTTCAAATAAACCTCGAAGCAGGGCTTTGGTAACATTTCATAAGCACTGTCCTGCAAGA < SRR4302543.2718276/94‑1 (MQ=60)
ATTTCGATATCCCAGCACCCATCTTCCGCGCCATTGTTCAAATAAACCTCGAAGCAGGGCTTTGGTAACATTTCATAAGCACTGTCCTGCAAGA > SRR4302543.6162699/1‑94 (MQ=60)
TTTCGATATCCCAGCACCCATCTTCCGCGCCATTGTTCAAATAAACCTCGAAGCAGGGCTTTGGTAACATTTCATAAGCACTGTCCTGCAAGAG < SRR4302543.6581228/94‑1 (MQ=60)
TTCGATATCCCAGCACCCATCTTCCGCGCCATTGTTCAAATAAACCTCGAAGCAGGGCTTTGGTAACATTTCATAAGCACTGTCCTGCAAGAGA > SRR4302543.6282952/1‑94 (MQ=60)
TCGATATCCCAGCACCCATCTTCCGCGCCATTGTTCAAATAAACCTCGAAGCAGGGCTTTGGTAACATTTCATAAGCACTGTCCTGCAAGAGAC < SRR4302543.3753321/94‑1 (MQ=60)
CGATATCCCAGCACCCATCTTCCGCGCCATTGTTCAAATAAACCTCGAAGCAGGGCTTTGGTAACATTTCATAAGCACTGTCCTGCAAGAGACT > SRR4302543.5377002/1‑94 (MQ=60)
GATATCCCAGCACCCATCTTCCGCGCCATTGTTCAAATAAACCTCGAAGCAGGGCTTTGGTAACATTTCATAAGCACTGTCCTGCAAGAGACTA > SRR4302543.7192217/1‑94 (MQ=60)
TCCCAGCACCCATCTTCCGCGCCATTGTTCAAATAAACCTCGAAGCAGGGCTTTGGTAACATTTCATAAGCACTGTCCTGCAAGAGACTATTAA < SRR4302543.3760814/94‑1 (MQ=60)
TCCCAGCACCCATCTTCCGCGCCATTGTTCAAATAAACCTCGAAGCAGGGCTTTGGTAACATTTCATAAGCACTGTCCTGCAAGAGACTATTAA < SRR4302543.3760813/94‑1 (MQ=60)
CCAGCACCCATCTTCCGCGCCATTGTTCAAATAAACCTCGAAGCAGGGCTTTGGTAACATTTCATAAGCACTGTCCTGCAAGAGACTATTAAAG < SRR4302543.3308389/94‑1 (MQ=60)
CCAGCACCCATCTTCCGCGCCATTGTTCAAATAAACCTCGAAGCAGGGCTTTGGTAACATTTCATAAGCACTGTCCTGCAAGAGACTATTAAAG > SRR4302543.1349743/1‑94 (MQ=60)
CAGCACCCATCTTCCGCGCCATTGTTCAAATAAACCTCGAAGCAGGGCTTTGGTAACATTTCATAAGCACTGTCCTGCAAGAGACTATTAAAGA > SRR4302543.3705956/1‑94 (MQ=60)
CAGCACCCATCTTCCGCGCCATTGTTCAAATAAACCTCGAAGCAGGGCTTTGGTAACATTTCATAAGCACTGTCCTGCAAGAGACTATTAAAGA > SRR4302543.1037420/1‑94 (MQ=60)
GCACCCATCTTCCGCGCCATTGTTCAAATAAACCTCGAAGCAGGGCTTTGGTAACATTTCATAAGCACTGTCCTGCAAGAGACTATTAAAGAAC > SRR4302543.6800504/1‑94 (MQ=60)
GCACCCATCTTCCGCGCCATTGTTCAAATAAACCTCGAAGCAGGGCTTTGGTAACATTTCATAAGCACTGTCCTGCAAGAGACTATTAAAGAAC < SRR4302543.6357927/94‑1 (MQ=60)
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TCAAAAAAAAGAGTGGTCATCGCGTTAACACACCGCCCTGAGATGAATTAGTGATGTTTTGGCTGCACCGCAACATACATTTCGATATCCCAGTACCCATCTTCCGCGCCATTGTTCAAATAAACCTCGAAGCAGGGCTTTGGTAACATTTCATAAGCACTGTCCTGCAAGAGACTATTAAAGAAC > NC_000913/2078764‑2078949
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| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
