Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I1 R1
|
1696 |
279.3 |
15874187 |
97.8% |
15524954 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
2,092,192 |
A→G |
T235A (ACC→GCC) |
b2022 → |
imidazoleglycerolphosphate dehydratase |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 2,092,192 | 0 | A | G | 99.5%
| 637.9
/ NA
| 203 | T235A (ACC→GCC) | b2022 | imidazoleglycerolphosphate dehydratase |
| Reads supporting (aligned to +/- strand): ref base A (1/0); new base G (109/93); total (110/93) |
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
Only 100 of 212 total aligned reads displayed.
CTGGATCAGATCGCTACCCACGGCGGTTTCCGCATGGAAATCAACGTCAAAGGCGACCTCTATATCGACGATCACCACACCGTCGAAGATACCGGCCTGGCGCTGGGCGAAGCGCTAAAAATCGCCCTCGGAGACAAACGCGGTATTTGCCGCTTTGGTTTTGTGCTACCGATGGACGAA > NC_000913/2092102‑2092281
|
gtGGATCAGATCGCTACCCACGGCGGTTTCCGCATGGAAATAAACGTCAAAGGCGACCTCTATATCGACGATCACCACACCGTCGAAGATGcc < 1:2790483/92‑1 (MQ=255)
cTGGATCAGATCGCTACCCACGGCGGTTTCCGCATGGAAATCAACGTCAAAGGCGACCTCTATATCGACGATCACCACACCGTCGAAGATGcc > 2:7891796/1‑93 (MQ=255)
cTGGATCAGATCGCTACCCACGGCGGTTTCCGCATGGAAATCAACGTCAAAGGCGACCTCTATATCGACGATCACCACACCGTCGAAGATGcc > 2:575459/1‑93 (MQ=255)
ggATCAGATCGCTACCCACGGCGGTTTCCGCATGGAAATCAACGTCAAAGGCGACCTCTATATCGACGATCACCACACCGTCGAAGATGCCgg > 2:3714198/1‑93 (MQ=255)
ggATCAGATCGCTACCCACGGCGGTTTCCGCATGGAAATCAACGTCAAAGGCGACCTCTATATCGACGATCACCACACCGTCGAAGATGCCgg > 2:6466544/1‑93 (MQ=255)
tCAGATCGCTACCCACGGCGGTTTCCGCATGGAAATCAACGTCAAAGGCGACCTCTATATCGACGATCACCACACCGTCGAAGATGCCGGCCt > 1:7045215/1‑93 (MQ=255)
tCAGATCGCTACCCACGGCGGTTTCCGCATGGAAATCAACGTCAAAGGCGACCTCTATATCGACGATCACCACACCGTCGAAGATGCCGGCCt > 2:1098966/1‑93 (MQ=255)
tCAGATCGCTACCCACGGCGGTTTCCGCATGGAAATCAACGTCAAAGGCGACCTCTATATCGACGATCACCACACCGTCGAAGATGCCGGCCt > 1:4849827/1‑93 (MQ=255)
cAGATCGCTACCCACGGCGGTTTCCGCATGGAAATCAACGTCAAAGGCGACCTCTATATCGACGATCACCACACCGTCGAAGATGCCGGCCTg < 2:1391697/93‑1 (MQ=255)
gATCGCTACCCACGGCGGTTTCCGCATGGAAATCAACGTCAAAGGCGACCTCTATATCGACGATCACCACACCGTCGAAGATGCCGGCCTGgc > 2:186792/1‑93 (MQ=255)
aTCGCTACCCACGGCGGTTTCCGCATGGAAATCAACGTCAAAGGCGACCTCTATATCGACGATCACCACACCGTCGAAGATGCCGGCCTGgcg < 2:2955807/93‑1 (MQ=255)
tCGCTACCCACGGCGGTTTCCGCATGGAAATCAACGTCAAAGGCGACCTCTATATCGACGATCACCACACCGTCGAAGATGCCGGCCTGgcgc < 2:3961550/93‑1 (MQ=255)
tCGCTACCCACGGCGGTTTCCGCATGGAAATCAACGTCAAAGGCGACCTCTATATCGACGATCACCACACCGTCGAAGATGCCGGCCTGgcgc < 2:2297889/93‑1 (MQ=255)
tCGCTACCCACGGCGGTTTCCGCATGGAAATCAACGTCAAAGGCGACCTCTATATCGACGATCACCACACCGTCGAAGATGCCGGCCTGgcgc > 1:125890/1‑93 (MQ=255)
tCGCTACCCACGGCGGTTTCCGCATGGAAATCAACGTCAAAGGCGACCTCTATATCGACGATCACCACACCGTCGAAGATGCCGGCCTGgcgc > 2:1030261/1‑93 (MQ=255)
cGCTACCCACGGCGGTTTCCGCATGGAAATCAACGTCAAAGGCGACCTCTATATCGACGATCACCACACCGTCGAAGATGCCGGCCTGGCGCt < 1:6446052/93‑1 (MQ=255)
gCTACCCACGGCGGTTTCCGCATGGAAATCAACGTCAAAGGCGACCTCTATATCGACGATCACCACACCGTCGAAGATGCCGGCCTGGCGCTg > 1:5527814/1‑93 (MQ=255)
gCTACCCACGGCGGTTTCCGCATGGAAATCAACGTCAAAGGCGACCTCTATATCGACGATCACCACACCGTCGAAGATGCCGGCCTGGCGCTg < 1:6319854/93‑1 (MQ=255)
gCTACCCACGGCGGTTTCCGCATGGAAATCAACGTCAAAGGCGACCTCTATATCGACGATCACCACACCGTCGAAGATGCCGGCCTGGCGCTg > 2:6379988/1‑93 (MQ=255)
ccTACCCACGGCGGTTTCCGCATGGAAATCAACGTCAAAGGCGACCTCTATATCGACGATCACCACACCGTCGAAGATGCCGGCCTGGCGCTg < 1:1895546/92‑1 (MQ=255)
cTACCCACGGCGGTTTCCGCATGGAGATCAACGTCAAAGGCGACCTCTATATCGACGATCACCACACCGTCGAAGATGCCGGCCTGGAGCTgg > 1:2602031/1‑93 (MQ=255)
tACCCACGGCGGTTTCCGCATGGAAATCAACGTCAAAGGCGACCTCTATATCGACGATCACCACACCGTGGAAGATGCCGGCCTGGCGCTggg > 2:4354393/1‑93 (MQ=255)
tACCCACGGCGGTTTCCGCATGGAAATCAACGTCAAAGGCGACCTCTATATCGACGATCACCACACCGTCGAAGATGCCGGCCTGGCGCTggg > 2:1500323/1‑93 (MQ=255)
tACCCACGGCGGTTTCCGCATGGAAATCAACGTCAAAGGCGACCTCTATATCGACGATCACCACACCGTCGAAGATGCCGGCCTGGCGCTggg > 2:7660936/1‑93 (MQ=255)
tcccACGGCGGTTTCCGCATGGAAATCAACGTCAAAGGCGACCTCTATATCGACGATCACCACACCGTCGAAGATGCCGGCCTGGCGCTGGGc < 2:4699430/92‑1 (MQ=255)
aCCCACGGCGGTTTCCGCATGGAAATCAACGTCAAAGGCGACCTCTATATCGACGATCACCACACCGTCGAAGATGCCGGCCTGGCGCTgggg > 2:2701228/1‑92 (MQ=255)
cACGGCGGTTTCCGCATGGAAATCAACGTCAAAGGCGACCTCTATATCGACGATCACCACACCGTCGAAGATGCCGGCCTGGCGCTGGGCGaa < 2:5022480/93‑1 (MQ=255)
cggcggTTTCCGCATGGAAATCAACGTCAAAGGCGACCTCTATATCGACGATCACCACACCGTCGAAGATGCCGGCCTGGCGCTGGGCGAAgc < 1:5819431/93‑1 (MQ=255)
ggcggTTTCCGCATGGAAATCAACGTCAAAGGCGACCTCTATATCGACGATCACCACACCGTCGAAGATGCCGGCCTGGCGCTGGGCGAAgcg < 1:4872448/93‑1 (MQ=255)
ggTTTCCGCATGGAAATCAACGTCAAAGGCGACCTCTATATCGACGATCACCACACCGTCGAAGATGCCGGCCTGGCGCTGGGCGAAGCGCTa > 1:3510120/1‑93 (MQ=255)
ggTTTCCGCATGGAAATCAACGTCAAAGGCGACCTCTATATCGACGATCACCACACCGTCGAAGATGCCGGCCTGGCGCTGGGCGAAGCGCTa > 2:4762656/1‑93 (MQ=255)
gTTTCCGCATGGAAATCAACGTCAAAGGCGACCTCTATATCGACGATCACCACACCGTCGAAGATGCCGGCCTGGCGCTGGGCGAAGCGCTaa > 2:2060190/1‑93 (MQ=255)
gTTTCCGCATAGAAATCAACGTCAAAGGCGCCCTCTATATCGACGATCACCACACCGTCGAAGATGCCGGCCTGGCGCTGGGCGAAGCGCTaa < 2:3162730/93‑1 (MQ=255)
tCCGCATGGAAATCAACGTCAAAGGCGACCTCTATATCGACGATCACCACACCGTCGAAGATGCCGGCCTGGCGCTGGGCGAAGCGCTaaaaa > 2:2328437/1‑93 (MQ=255)
cGCATGGAAATCAACGTCAAAGGCGACCTCTATATCGACGATCACCACACCGTCGAAGATGCCGGCCTGGCGCTGGGCGAAGCGCTAAAAATc < 1:7397663/93‑1 (MQ=255)
gCATGGAAATCAACGTCAAAGGCGACCTCTATATCGACGATCACCACACCGTCGAAGATGCCGGCCTGGCGCTGGGCGAAGCGCTAAAAATCg > 2:4430208/1‑93 (MQ=255)
cATGGAAATCAACGTCAAAGGCGACCTCTATATCGACGATCACCACACCGTCGAAGATGCCGGCCTGGCGCTGGGCGAAGCGCTAAAAATCGc < 1:1025127/93‑1 (MQ=255)
cATGGAAATCAACGTCAAAGGCGACCTCTATATCGACGATCACCACACCGTCGAAGATGCCGGCCTGGCGCTGGGCGAAGCGCTAAAAATCGc < 1:512466/93‑1 (MQ=255)
cATGGAAATCAACGTCAAAGGCGACCTCTATATCGACGATCACCACACCGTCGAAGATGCCGGCCTGGCGCTGGGCGAAGCGCTAAAAATCGc < 1:3067193/93‑1 (MQ=255)
cATGGAAATCAACGTCAAAGGCGACCTCTATATCGACGATCACCACACCGTCGAAGATGCCGGCCTGGCGCTGGGCGAAGCGCTAAAAATCGc < 2:5576420/93‑1 (MQ=255)
aTGGAAATCAACGTCAAAGGCGACCTCTATATCGACGATCACCACACCGTCGAAGATGCCGGCCTGGCGCTGGGCGAAGCGCTAAAAATCGcc > 1:4469435/1‑93 (MQ=255)
tGGAAATCAACGTCAAAGGCGACCTCTATATCGACGATCACCACACCGTCGAAGATGCCGGCCTGGCGCTGGGCGAAGCGCTAAAAATCGccc > 1:6190092/1‑93 (MQ=255)
tGGAAATCAACGTCAAAGGCGACCTCTATATCGACGATCACCACACCGTCGAAGATGCCGGCCTGGCGCTGGGCGAAGCGCTAAAAATCGccc > 2:3579735/1‑93 (MQ=255)
ggAAATCAACGTCAAAGGCGACCTCTATATCGACGATCACCACACCGTCGAAGATGCCGGCCTGGCGCTGGGCGAAGCGCTAAAAATCGCCCt < 1:6547598/93‑1 (MQ=255)
gAAATCAACGTCAAAGGCGACCTCTATATCGACGATCACCACACCGTCGAAGATGCCGGCCTGGGGCTGGGCGAAGCGCTAAAAATCGCCCTc > 2:6832525/1‑93 (MQ=255)
aaaTCAACGTCAAAGGCGGCCTCTATATCGACGATCACCACACCGTCGAAGATGCCGGCCTGGCGCTGGGCGAAGCGCTAAAAATCGCCCTCg < 2:4020240/93‑1 (MQ=255)
aaaTCAACGTCAAAGGCGACCTCTATATCGACGATCACCACACCGTCGAAGATGCCGGCCTGGCGCTGGGCGAAGCGCTAAAAATCGCCCTCg > 1:1194111/1‑93 (MQ=255)
aTCAACGTCAAAGGCGACCTCTATATCGACGATCACCACACCGTCGAAGATGCCGGCCTGGCGCTGGGCGAAGCGCTAAAAATCGCCCTCggg > 2:5964918/1‑92 (MQ=255)
aTCAACGTCAAAGGCGACCTCTATATCGACGATCACCACACCGTCGAAGATGCCGGCCTGGCGCTGGGCGAAGCGCTAAAAATCGCCCTCGga < 2:6002323/93‑1 (MQ=255)
cAACGTCAAAGGCGACCTCTATATCGACGATCACCACACCGTCGAAGATGCCGGCCTGGCGCTGGGCGAAGCGCTAAAAATCGCCCTCGgaga > 1:337245/1‑93 (MQ=255)
aaCGTCAAAGGCGACCTCTATATCGACGATCACCACACCGTCGAAGATGCCGGCCTGGCGCTGGGCGAAGCGCTAAAAATCGCCCTCGGAGAc < 2:7916035/93‑1 (MQ=255)
aaCGTCAAAGGCGACCTCTATATCGACGATCACCACACCGTCGAAGATGCCGGCCTGGCGCTGGGCGAAGCGCTAAAAATCGCCCCCGgaggc > 2:5631253/1‑91 (MQ=255)
aCGTCAAAGGCGACCTCTATATCGACGATCACCACACCGTCGAAGATGCCGGCCTGGCGCTGGGCGAAGCGCTAAAAATCGCCCTCGGAGACa > 1:2401235/1‑93 (MQ=255)
aCGTCAAAGGCGACCTCTATATCGACGATCACCACACCGTCGAAGATGCCGGCCTGGCGCTGGGCGAAGCGCTAAAAATCGCCCTCGGAGACa > 1:5438806/1‑93 (MQ=255)
cGTCAAAGGCGACCTCTATATCGACGATCACCACACCGTCGAAGATGCCGGCCTGGCGCTGGGCGAAGCGCTAAAAATCGCCCTCGGAGACaa > 1:1770486/1‑93 (MQ=255)
cGTCAAAGGCGACCTCTATATCGACGATCACCACACCGTCGAAGATGCCGGCCTGGCGCTGGGCGAAGCGCTAAAAATCGCCCTCGGAGACaa < 2:4974153/93‑1 (MQ=255)
gTCAAAGGCGACCTCTATATCGACGATCACCACACCGTCGAAGATGCCGGCCTGGCGCTGGGCGAAGCGCTAAAAATCGCCCTCGGAGACaaa < 2:4846470/93‑1 (MQ=255)
cAAAGGCGACCTCTATATCGACGATCACCACACCGTCGAAGATGCCGGCCTGGCGCTGGGCGAAGCGCTAAAAATCGCCCTCGGAGACAAAcg < 2:7467692/93‑1 (MQ=255)
aaaGGCGACCTCTATATCGACGATCACCACACCGTCGAAGATGCCGGCCTGGCGCTGGGCGAAGCGCTAAAAATCGCCCTCGGAGACAAAcgc > 1:7164374/1‑93 (MQ=255)
aaGGCGACCTCTATATCGACGATCACCACACCGTCGAAGATGCCGGCCTGGCGCTGGGCGAAGCGCTAAAAATCGCCCTCGGAGACAAAcgcg > 2:240530/1‑93 (MQ=255)
aGGCGACCTCTATATCGACGATCACCACACCGTCGAAGATGCCGGCCTGGCGCTGGGCGAAGCGCTAAAAATCGCCCTCGGAGACAAACGCgg > 2:963446/1‑93 (MQ=255)
aGGCGACCTCTATATCGACGATCACCACACCGTCGAAGATGCCGGCCTGGCGCTGGGCGAAGCGCTAAAAATCGCCCTCGGAGACAAACGCgg < 1:4073929/93‑1 (MQ=255)
ggCGACCTCTATATCGACGATCACCACACCGTCGAAGATGCCGGCCTGGCGCTGGGCGAAGCGCTAAAAATCGCCCTCGGAGACAAACGCGGt < 2:5696972/93‑1 (MQ=255)
gACCTCTATATCGACGATCACCACACCGTCGAAGATGCCGGCCTGGCGCTGGGCGAAGCGCTAAAAATCGCCCTCGGAGACAAACGCGGTAtt > 1:5888859/1‑93 (MQ=255)
gACCTCTATATCGACGATCACCACACCGTCGAAGATGCCGGCCTGGCGCTGGGCGAAGCGCTAAAAATCGCCCTCGGAGACAAACGCGGTAtt > 1:6684243/1‑93 (MQ=255)
gACCTCTATATCGACGATCACCACACCGTCGAAGATGCCGGCCTGGCGCTGGGCGAAGCGCTAAAAATCGCCCTCGGAGACAAACGCGGTAtt < 2:2474043/93‑1 (MQ=255)
gACCTCTATATCGACGATCACCACACCGTCGAAGACGCCGGCCTGCAGCTGGGGGAAGCGCTAAAAAACGCCCCCGGAGCCAAACGCGGTAtt > 2:6211520/1‑93 (MQ=255)
aCCTCTATATCGACGATCACCACACCGTCGAAGATGCCGGCCTGGCGCTGGGCGAAGCGCTAAAAATCGCCCTCGGAGACAAACGCGGTAttt > 1:6974075/1‑93 (MQ=255)
aCCTCTATATCGACGATCACCACACCGTCGAAGATGCCGGCCTGGCGCTGGGCGAAGCGCTAAAAATCGCCCTCGGAGACAAACGCGGTAttt < 1:5968798/93‑1 (MQ=255)
ctctATATCGACGATCACCACACCGTCGAAGATGCCGGCCTGGCGCTGGGCGAAGCGCTAAAAATCGCCCTCGGAGACAAACGCGGTATTTGc > 2:2692618/1‑93 (MQ=255)
tctGTATCGACGATCACCACACCGTCGAAGATGCCGGCCTGGCGCTGGGCGAAGCGCTAAAAATCGCCCTCGGAGACAAACGCGGTATTTGcc < 1:1936006/93‑1 (MQ=255)
tctATATCGACGATCACCACACCGTCGAAGATGCCGGCCTGGCGCTGGGCGAAGCGCTAAAAATCGCCCTCGGAGACAAACGCGGTATTTGcc > 1:4332668/1‑93 (MQ=255)
tctATATCGACGATCACCACACCGTCGAAGATGCCGGCCTGGCGCTGGGCGAAGCGCTAAAAATCGCCCTCGGAGACAAACGCGGTATTTGcc > 2:5547886/1‑93 (MQ=255)
tataTCGACGATCACCACGCCGTCGAAGATGCCGGCCTGGCGCTGGGCGAAGCGCTAAAAATCGCCCTCGGAGACAAACGCGGTATTTGCCGc > 1:4160723/1‑93 (MQ=255)
tataTCGACGATCACCACACCGTCGAAGATGCCGGCCTGGCGCTGGGCGAAGCTCTAAAAATCGCCCTCGGAGACAAACGCGGTATTTGCCGc < 2:2868030/93‑1 (MQ=255)
tatCGACGATCACCACACCGTCGAAGATGCCGGCCTGGCGCTGGGCGAAGCGCTAAAAATCGCCCTCGGAGACAAACGCGGTATTTGCCGCtt > 1:2300437/1‑93 (MQ=255)
atCGACGATCACCACACCGTCGAAGATGCCGGCCTGGCGCTGGGCGAAGCGCTAAAAATCGCCCTCGGAGACAAACGCGGTATTTGCCGCttt < 2:1236400/93‑1 (MQ=255)
gacgaTCACCACCCCGTCGAAGATGCCGGCCTGGCGCTGGGCGAAGCGCTAAAAATCGCCCTCGGAGACAAACGCGGTATTTGCCGCTTTGGt < 1:2162176/93‑1 (MQ=255)
gacgaTCACCACACCGTCGAAGATGCCGGCCTGGCGCTGGGCGAAGCGCTAAAAATCGCCCTCGGAGACAAACGCGGTATTTGCCGCTTTGGt > 1:2982962/1‑93 (MQ=255)
gacgaTCACCACACCGTCGAAGATGCCGGCCTGGCGCTGGGCGAAGCGCTAAAAATCGCCCTCGCAGACAAACGCGGAATTTGCCCCTTTGGt > 2:5592403/1‑93 (MQ=255)
acgaTCACCACACCGTCGAAGATGCCGGCCTGGCGCTGGGCGAAGCGCTAAAAATCGCCCTCGGAGACAAACGCGGTATTTGCCGCTTTGGtt > 1:1512419/1‑93 (MQ=255)
cgaTCACCACACCGTCGAAGATGCCGGCCTGGCGCTGGGCGAAGCGCTAAAAATCGCCCTCGGAGACAAACGCGGTATTTGCCGCTTTGGttt < 2:4149377/93‑1 (MQ=255)
gaTCACCACACCGTCGAAGATGCCGGCCTGGCGCTGGGCGAAGCGCTAAAAATCGCCCTCGGAGACAAACGCGGTATTTGCCGCTTTGGtttt > 2:2939840/1‑93 (MQ=255)
gaTCACCACACCGTCGAAGATGCCGGCCTGGCGCTGGGCGAAGCGCTAAAAATCGCCCTCGGAGACAAACGCGGTATTTGCCGCTTTGGtttt < 2:2236506/93‑1 (MQ=255)
aTCACCACACCGTCGAAGATGCCGGCCTGGCGCTGGGCGAAGCGCTAAAAATCGCCCTCGGAGACAAACGCGGTATTTGCCGCTTTGGTTTtg > 2:5897190/1‑93 (MQ=255)
caccacACCGTCGAAGATGCCGGCCTGGCGCTGGGCGAAGCGCTAAAAATCGCCCTCGGAGACAAACGCGGTATTTGCCGCTTTGGTTTtgtg < 1:6304487/93‑1 (MQ=255)
ccacACCGTCGAAGATGCCGGCCTGGCGCTGGGCGAAGCGCTAAAAATCGCCCTCGGAGACAAACGCGGTATTTGCCGCTTTGGTTTTGTGCt < 2:6911983/93‑1 (MQ=255)
cacCGTCGAAGATGCCGGCCTGGCGCTGGGCGAAGCGCTAAAAATCGCCCTCGGAGACAAACGCGGTATTTGCCGCTTTGGTTTTGTGCTAcc < 1:7327523/93‑1 (MQ=255)
ccGTCGAAGATGCCGGCCTGGCGCTGGGCGAAGCGCTAAAAATCGCCCTCGGAGACAAACGCGGTATTTGCCGCTTTGGTTTTGTGCTACCGa < 2:5173415/93‑1 (MQ=255)
ccGTCGAAGATGCCGGCCTGGCGCTGGGCGAAGCGCTAAAAATCGCCCTCGGAGACAAACGCGGTATTTGCCGCTTTGGTTTTGTGCTACCGa < 1:1763670/93‑1 (MQ=255)
ccGTCGAAGATGCCGGCCTGGCGCTGGGCGAAGCGCTAAAAATCGCCCTCGGAGACAAACGCGGCATTTGCCGCTTTGGTTTTTTGCTACCGa > 1:3906758/1‑93 (MQ=255)
cGTCGAAGATGCCGGCCTGGCGCTGGGCGAAGCGCTAAAAATCGCCCTCGGAGACAAACGCGGTATTTGCCGCTTTGGTTTTGTGCTACCGAt > 1:7582628/1‑93 (MQ=255)
cGTCGAAGATGCCGGCCTGGCGCTGGGCGAAGCGCTAAAAATCGCCCTCGGAGACAAACGCGGTATTTGCCGCTTTGGTTTTGTGCTACCGAt > 1:4386604/1‑93 (MQ=255)
ccGAAGATGCCGCCCTGGCGCTGGGCGAAGCGCTAAAAATCGCCCTCGGAGACAAACGCGGTATTTGCCGCTTTGGTTTTGTGCTACCGATgg < 2:3459830/92‑1 (MQ=255)
cGAAGATGCCGGCCTGGCGCTGGGCGAAGCGCTAAAAATCGCCCTCGGAGACAAACGCGGTATTTGCCGCTTTGGTTTTGTGCTACCGATGGa < 1:1375473/93‑1 (MQ=255)
gAAGATGCCGGCCTGGCGCTGGGCGAAGCGCTAAAAATCGCCCTCGGAGACAAACGCGGTATTTGCCGCTTTGGTTTTGTGCTACCGATGGAc < 2:699791/93‑1 (MQ=255)
gAAGATGCCGGCCTGGCGCTGGGCGAAGCGCTAAAAATCGCCCTCGGAGACAAACGCGGTATTTGCCGCTTTGGTTTTGTGCTACCGATGGAc < 1:3435617/93‑1 (MQ=255)
gAAGATGCCGGCCGGGCGCTGGGCGAAGCGCTAAAAATCGCCCTCGGAGACAAACGCGGTATTTGCCGCTTTGGTTTTGTGCTACCGATGGAc < 1:4752274/93‑1 (MQ=255)
aGATACCGGCCTGGCGCTGGGCGAAGCGCTAAAAATCGCCCTCGGAGACAAACGCGGTATTTGCCGCTTTGGTTTTGTGCTACCGATGGACGa > 2:5045974/1‑93 (MQ=255)
gATGCCGGCCTGGCGCTGGGCGAAGCGCTAAAAATCGCCCTCGGAGACAAACGCGGTATTTGCCGCTTTGGTTTTGTGCTACCGATGGACGaa < 1:7192929/93‑1 (MQ=255)
|
CTGGATCAGATCGCTACCCACGGCGGTTTCCGCATGGAAATCAACGTCAAAGGCGACCTCTATATCGACGATCACCACACCGTCGAAGATACCGGCCTGGCGCTGGGCGAAGCGCTAAAAATCGCCCTCGGAGACAAACGCGGTATTTGCCGCTTTGGTTTTGTGCTACCGATGGACGAA > NC_000913/2092102‑2092281
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
ATGCTGGATCAGATCGCTACCCACGGCGGTTTCCGCATGGAAATCAACGTCAAAGGCGACCTCTATATCGACGATCACCACACCGTCGAAGATACCGGCCTGGCGCTGGGCGAAGCGCTAAAAATCGCCCTCGGAGACAAACGCGGTATTTGCCGCTTTGGTTTTGTGCTACCGATGGACGAATG > NC_000913/2092099‑2092283
|
ATGCTGGATCAGATCGCTACCCACGGCGGTTTCCGCATGGAAATCAACGTCAAAGGCGACCTCTATATCGACGATCACCACACCGTCGAAGATG < SRR4302543.2599130/94‑1 (MQ=60)
ATGCTGGATCAGATCGCTACCCACGGCGGTTTCCGCATGGAAATCAACGTCAAAGGCGACCTCTATATCGACGATCACCACACCGTCGAAGATG > SRR4302543.6596324/1‑94 (MQ=60)
TGCTGGATCAGATCGCTACCCACGGCGGTTTCCGCATGGAAATCAACGTCAAAGGCGACCTCTATATCGACGATCACCACACCGTCGAAGATGC > SRR4302543.1504483/1‑94 (MQ=60)
GCTGGATCAGATCGCTACCCACGGCGGTTTCCGCATGGAAATCAACGTCAAAGGCGACCTCTATATCGACGATCACCACACCGTCGAAGATGCC < SRR4302543.2022986/94‑1 (MQ=60)
GCTGGATCAGATCGCTACCCACGGCGGTTTCCGCATGGAAATCAACGTCAAAGGCGACCTCTATATCGACGATCACCACACCGTCGAAGATGCC > SRR4302543.6687659/1‑94 (MQ=60)
GTGGATCAGATCGCTACCCACGGCGGTTTCCGCATGGAAATAAACGTCAAAGGCGACCTCTATATCGACGATCACCACACCGTCGAAGATGCCG < SRR4302543.2815963/94‑1 (MQ=60)
CTGGATCAGATCGCTACCCACGGCGGTTTCCGCATGGAAATCAACGTCAAAGGCGACCTCTATATCGACGATCACCACACCGTCGAATATGCCG > SRR4302543.1147793/1‑94 (MQ=60)
TGGATCAGATCGCTACCCACGGCGGTTTCCGCATGGAAATCAACGTCAAAGGCGACCTCTATATCGACGATCACCACACCGTCGAAGATGCCGG < SRR4302543.1498299/94‑1 (MQ=60)
TGGATCAGATCGCTACCCACGGCGGTTTCCGCATGGAAATCAACGTCAAAGGCGACCTCTATATCGACGATCACCACACCGTCGAAGATGCCGG > SRR4302543.4384105/1‑94 (MQ=60)
GGATCAGATCGCTACCCACGGCGGTTTCCGCATGGAAATCAACGTCAAAGGCGACCTCTATATCGACGATCACCACACCGTCGAAGATGCCGGC < SRR4302543.2170623/94‑1 (MQ=60)
ATCAGATCGCTACCCACGGCGGTTTCCGCATGGAAATCAACGTCAAAGGCGACCTCTATATCGACGATCACCACACCGTCGAAGATGCCGGCCT > SRR4302543.4894054/1‑94 (MQ=60)
ATCAGATCGCTACCCACGGCGGTTTCCGCATGGAAATCAACGTCAAAGGCGACCTCTATATCGACGATCACCACACCGTCGAAGATGCCGGCCT > SRR4302543.7113419/1‑94 (MQ=60)
GATCGCTACCCACGGCGGTTTCCGCATGGAAATCAACGTCAAAGGCGACCTCTATATCGACGATCACCACACCGTCGAAGATGCCGGCCTGGCG > SRR4302543.7234034/1‑94 (MQ=60)
ATCGCTACCCACGGCGGTTTCCGCATGGAAATCAACGTCAAAGGCGACCTCTATATCGACGATCACCACACCGTCGAAGATGCCGGCCTGGCGC > SRR4302543.127028/1‑94 (MQ=60)
ATCGCTACCCACGGCGGTTTCCGCATGGAAATCAACGTCAAAGGCGACCTCTATATCGACGATCACCACACCGTCGAAGATGCCGGCCTGGCGC < SRR4302543.4916321/94‑1 (MQ=60)
CGCTACCCACGGCGGTTTCCGCATGGAAATCAACGTCAAAGGCGACCTCTATATCGACGATCACCACACCGTCGAAGATGCCGGCCTGGCGCTG < SRR4302543.6506784/94‑1 (MQ=60)
CGCTACCCACGGCGGTTTCCGCATGGAAATCAACGTCAAAGGCGACCTCTATATCGACGATCACCACACCGTCGAAGATGCCGGCCTGGCGCTG < SRR4302543.3513028/94‑1 (MQ=60)
CGCTACCCACGGCGGTTTCCGCATGGAAATCAACGTCAAAGGCGACCTCTATATCGACGATCACCACACCGTCGAAGATGCCGGCCTGGCGCTG > SRR4302543.5578027/1‑94 (MQ=60)
GCTACCCACGGCGGTTTCCGCATGGAGATCAACGTCAAAGGCGACCTCTATATCGACGATCACCACACCGTCGAAGATGCCGGCCTGGAGCTGG > SRR4302543.2625662/1‑94 (MQ=60)
GCTACCCACGGCGGTTTCCGCATGGAAATCAACGTCAAAGGCGACCTCTATATCGACGATCACCACACCGTCGAAGATGCCGGCCTGGCGCTGG < SRR4302543.6379286/94‑1 (MQ=60)
CCTACCCACGGCGGTTTCCGCATGGAAATCAACGTCAAAGGCGACCTCTATATCGACGATCACCACACCGTCGAAGATGCCGGCCTGGCGCTGG < SRR4302543.1912592/94‑1 (MQ=60)
CTACCCACGGCGGTTTCCGCATGGAAATCAACGTCAAAGGCGACCTCTATATCGACGATCACCACACCGTCGAAGATGCCGGCCTGGCGCTGGG < SRR4302543.2533535/94‑1 (MQ=60)
CTACCCACGGCGGTTTCCGCATGGAAATCAACGTCAAAGGCGACCTCTATATCGACGATCACCACACCGTCGAAGATGCCGGCCTGGCGCTGGG < SRR4302543.6016555/94‑1 (MQ=60)
CCCACGGCGGTTTCCGCATGGAAATCAACGTCAAAGGCGACCTCTATATCGACGATCACCACACCGTCGAAGATGCCGGCCTGGCGCTGGGCGA > SRR4302543.6518024/1‑94 (MQ=60)
CCCACGGCGGTTTCCGCATGGAAATCAACGTCAAAGGCGACCTCTATATCGACGATCACCACACCGTCGAAGATGCCGGCCTGGCGCTGGGCGA > SRR4302543.7434418/1‑94 (MQ=60)
CCACGGCGGTTTCCGCATGGAAATCAACGTCAAAGGCGACCTCTATATCGACGATCACCACACCGTCGAAGATGCCGGCCTGGCGCTGGGCGAA > SRR4302543.3927118/1‑94 (MQ=60)
CACGGCGGTTTCCGCATGGAAATCAACGTCAAAGGCGACCTCTATATCGACGATCACCACACCGTCGAAGATGCCGGCCTGGCGCTGGGCGAAG > SRR4302543.5748442/1‑94 (MQ=60)
CACGGCGGTTTCCGCATGGAAATCAACGTCAAAGGCGACCTCTATATCGACGATCACCACACCGTCGAAGATGCCGGCCTGGCGCTGGGCGAAG < SRR4302543.4079980/94‑1 (MQ=60)
CGGCGGTTTCCGCATGGAAATCAACGTCAAAGGCGACCTCTATATCGACGATCACCACACCGTCGAAGATGCCGGCCTGGCGCTGGGCGAAGCG < SRR4302543.5872345/94‑1 (MQ=60)
GGCGGTTTCCGCATGGAAATCAACGTCAAAGGCGACCTCTATATCGACGATCACCACACCGTCGAAGATGCCGGCCTGGCGCTGGGCGAAGCGC < SRR4302543.4916863/94‑1 (MQ=60)
CGGTTTCCGCATGGAAATCAACGTCAAAGGCGACCTCTATATCGACGATCACCACACCGTCGAAGATGCCGGCCTGGCGCTGGGCGAAGCGCTA > SRR4302543.3541489/1‑94 (MQ=60)
CGGTGTCCGCATGGAAATCAACGTCAAAGGCGACCTCTATATCGACGATCACCACACCGTCGAAGATGCCGGCCTGGCGCTGGGCGAAGCGCTA < SRR4302543.6371532/94‑1 (MQ=60)
GGTTTCCGCATGGAAATCAACGTCAAAGGCGACCTCTATATCGACGATCACCACACCGTCGAAGATGCCGNNNNGGCGCTGGGCNANGCGCNAN > SRR4302543.2167451/1‑94 (MQ=60)
GGTTTCCGCATGGAAATCAACGTCAAAGGCGACCTCTATATCGACGATCACCACACCGTCGAAGATGCCGNCNNGGCGCTGGGCNANGCGCNAN > SRR4302543.2167453/1‑94 (MQ=60)
TCCGCATGGAAATCAACGTCAAAGGCGACCTCTATATCGACGATCACCACACCGTCGAAGATGCCGGCCTGGCGCTGGGCGAAGCGCTAAAAAT < SRR4302543.1929969/94‑1 (MQ=60)
CCGCATGGAAATCAACGTCAAAAGCGACCTCTATATCGACGATCACCACACCGTCGAAGATGCCGGCCTGGCGCTGGGCGAAGCGCTAAAAATC < SRR4302543.6132579/94‑1 (MQ=60)
CGCATGGAAATCAACGTCAAAGGCGACCTCTATATCGACGATCACCACACCGTCGAAGATGCCGGCCTGGCGCTGGGCGAAGCGCTAAAAATCG > SRR4302543.7203840/1‑94 (MQ=60)
CGCATGGAAATCAACGTCAAAGGCGACCTCTATATCGACGATCACCACACCGTCGAAGATGCCGGCCTGGCGCTGGGCGAAGCGCTAAAAATCG < SRR4302543.7468700/94‑1 (MQ=60)
GCATGGAAATCAACGTCAAAGGCGACCTCTATATCGACGATCACCACACCGTCGAAGATGCCGGCCTGGCGCTGGGCGAAGCGCTAAAAATCGC < SRR4302543.3430050/94‑1 (MQ=60)
CATGGAAATCAACGTCAAAGGCGACCTCTATATCGACGATCACCACACCGTCGAAGATGCCGGCCTGGCGCTGGGCGAAGCGCTAAAAATCGCC < SRR4302543.517234/94‑1 (MQ=60)
CATGGAAATCAACGTCAAAGGCGACCTCTATATCGACGATCACCACACCGTCGAAGATGCCGGCCTGGCGCTGGGCGAAGCGCTAAAAATCGCC < SRR4302543.3094777/94‑1 (MQ=60)
CATGGAAATCAACGTCAAAGGCGACCTCTATATCGACGATCACCACACCGTCGAAGATGCCGGCCTGGCGCTGGGCGAAGCGCTAAAAATCGCC > SRR4302543.4509965/1‑94 (MQ=60)
CATGGAAATCAACGTCAAAGGCGACCTCTATATCGACGATCACCACACCGTCGAAGATGCCGGCCTGGCGCTGGGCGAAGCGCTAAAAATCGCC < SRR4302543.1034204/94‑1 (MQ=60)
ATGGAAATCAACGTCAAAGGCGACCTCTATATCGACGATCACCACACCGTCGAAGATGCCGGCCTGGCGCTGGGCGAAGCGCTAAAAATCGCCC > SRR4302543.4581121/1‑94 (MQ=60)
ATGGAAATCAACGTCAAAGGCGACCTCTATATCGACGATCACCACACCGTCGAAGATGCCGGCCTGGCGCTGGGCGAAGCGCTAAAAATCGCCC > SRR4302543.6248574/1‑94 (MQ=60)
TGGAAATCAACGTCAAAGGCGTCCTCTATATCGACGATCACCACACCGTCGAAGATGCCGGCCTGGCGCTGGGCGAAGCGCTAAAAATCGCCCT < SRR4302543.2942259/94‑1 (MQ=60)
GGAAATCAACGTCAAAGGCGACCTCTATATCGACGATCACCACACCGTCGAAGATGCCGGCCTGGCGCTGGGCGAAGCGCTACAAATCGCCCTG > SRR4302543.7809012/1‑94 (MQ=60)
GGAAATCAACGTCAAAGGCGACCTCTATATCGACGATCACCACACCGTCGAAGATGCCGGCCTGGCGCTGGGCGAAGCGCTAAAAATCGCCCTC < SRR4302543.5390843/94‑1 (MQ=60)
GGAAATCAACGTCAAAGGCGACCTCTATATCGACGATCACCACACCGTCGAAGATGCCGGCCTGGCGCTGGGCGAAGCGCTAAAAATCGCCCTC > SRR4302543.2724348/1‑94 (MQ=60)
GGAAATCAACGTCAAAGGCGACCTCTATATCGACGATCACCACACCGTCGAAGATGCCGGCCTGGCGCTGGGCGAAGCGCTAAAAATCGCCCTC < SRR4302543.6609224/94‑1 (MQ=60)
GAAATCAACGTCAAAGGCGACCTCTATATCGACGATCACCACACCGTCGAAGATGCCGGCCTGGCGCTGGGCGAAGCGCTAAAAATCGCCCTCG > SRR4302543.1204877/1‑94 (MQ=60)
AATCAACGTCAAAGGCGACCTCTATATCGACGATCACCACACCGTCGAAGATGCCGGCCTGGCGCTGGGCGAAGCGCTAAAAATCGCCCTCGGA > SRR4302543.1667105/1‑94 (MQ=60)
TCAACGTCAAAGGCGACCTCTATATCGACGATCACCACACCGTCGAAGATGCCGGCCTGGCGCTGGGCGAAGCGCTAAAAATCGCCCTCGGAGA > SRR4302543.340341/1‑94 (MQ=60)
CAACGTCAAAGGCGACCTCTATATCGACGATCACCACACCGTCGAAGATGCCGGCCTGGCGCTGGGCGAAGCGCTAAAAATCGCCCTCGGAGAC < SRR4302543.12730/94‑1 (MQ=60)
AACGTCAAAGGCGACCTCTATATCGACGATCACCACACCGTCGAAGATGCCGGCCTGGCGCTGGGCGAAGCGCTAAAAATCGCCCTCGGAGACA > SRR4302543.5488186/1‑94 (MQ=60)
AACGTCAAAGGCGACCTCTATATCGACGATCACCACACCGTCGAAGATGCCGGCCTGGCGCTGGGCGAAGCGCTAAAAATCGCCCTCGGAGACA > SRR4302543.2422948/1‑94 (MQ=60)
ACGTCAAAGGCGACCTCTATATCGACGATCACCACACCGTCGAAGATGCCGGCCTGGCGCTGGGCGAAGCGCTAAAAATCGCCCTCGGAGACAA > SRR4302543.1786316/1‑94 (MQ=60)
ACGTCAAAGGCGACCTCTATATCGACGATCACCACACCGTCGAAGATGCCGGCCTGGAGCTGGGCGAAGCGCTAAAAATCGCCCTCGGAGACAA > SRR4302543.1786317/1‑94 (MQ=60)
GTCAAAGGCGACCTCTATATCGACGATCACCACACCGTCGAAGATGCCGGCCTGGCGCTGGGCGAAGCGCTAAAAATCGCCCTCGGAGACAAAC < SRR4302543.1212166/94‑1 (MQ=60)
ATCAAAGGCGACCTCTATATCGACGATCACCACACCGTCGAAGATGCCGGCCTGGCGCTGGGCGAAGCGCTAAAAATCGCCCTCGGAGACAAAC < SRR4302543.7058660/94‑1 (MQ=60)
CAAAGGCGACCTCTATATCGACGATCACCACACCGTCGAAGATGCCGGCCTGGCGCTGGGCGAAGCGCTAAAAATCGCCCTCGGAGACAAACGC > SRR4302543.6443778/1‑94 (MQ=60)
CAAAGGCGACCTCTATATCGACGATCACCACACCGTCGAAGATGCCGGCCTGGCGCTGGGCGAAGCGCTAAAAATCGCCCTCGGAGACAAACGC > SRR4302543.7233967/1‑94 (MQ=60)
AAAGGCGACCTCTATATCGACGATCACCACACCGTCGAAGATGCCGGCCTGGCGCTGGGCGAAGCGCTAAAAATCGCCCTCGGAGACAAACGCG < SRR4302543.3035086/94‑1 (MQ=60)
AGGCGACCTCTATATCGACGATCACCACACCGTCGAAGATGCCGGCCTGGCGCTGGGCGAAGCGCTAAAAATCGCCCTCGGAGACAAACGCGGT < SRR4302543.4110431/94‑1 (MQ=60)
GCGACCTCTATATCGACGATCACCACACCGTCGAAGATGCCGGCCTGGCGCTGGGCGAAGCGCTAAAAATCGCCCTCGGAGACAAACGCGGTAT > SRR4302543.5541660/1‑94 (MQ=60)
CGACCTCTATATCGACGATCACCACACCGTCGAAGATGCCGGCCTGGCGCTGGGCGAAGCGCTAAAAATCGCCCTCGGAGACAAACGCGGTATT > SRR4302543.6747346/1‑94 (MQ=60)
CGACCTCTATATCGACGATCACCACACCGTCGAAGATGCCGGCCTGGCGCTGGGCGAAGCGCTAAAAATCGCCCTCGGAGACAAACGCGGTATT > SRR4302543.5942542/1‑94 (MQ=60)
GACCTCTATATCGACGATCACCACACCGTCGAAGATGCCGGCCTGGCGCTGGGCGAAGCGCTAAAAATCGCCCTCGGAGACAAACGCGGTATTT > SRR4302543.7039703/1‑94 (MQ=60)
GACCTCTATATCGACGATCACCACACCGTCGAAGATGCCGGCCTGGCGCTGGGCGAAGCGCTAAAAATCGCCCTCGGAGACAAACGCGGTATTT > SRR4302543.2085940/1‑94 (MQ=60)
ACCTCTATATCGACGATCACCACACCGTCGAAGATGCCGGCCTGGCGCTGGGCGAAGCGCTAAAAATCGCCCTCGGAGACAAACGCGGTATTTG < SRR4302543.6023457/94‑1 (MQ=60)
CTCTATATCGACGATCACCACACCGTCGAAGATGCCGGCCTGGCGCTGGGCGAAGCGCTAAAAATCGCCCTCGGAGACAAACGCGGTATTTGCC > SRR4302543.4371979/1‑94 (MQ=60)
CTCTATATCGACGATCACCACACCGTCGAAGATGCCGGCCTGGCGCTGGGCGAAGCGCTAAAAATCGCCCTCGGAGACAAACGCGGTATTTGCC > SRR4302543.7266944/1‑94 (MQ=60)
TCTGTATCGACGATCACCACACCGTCGAAGATGCCGGCCTGGCGCTGGGCGAAGCGCTAAAAATCGCCCTCGGAGACAAACGCGGTATTTGCCG < SRR4302543.1953412/94‑1 (MQ=60)
TCTATATCGACGATCACCACACCGTCGAAGATGCCGGCCTGGCGCTGGGCGAAGCGCTAAAAATCGCCCTCGGAGACAAACGCGGTATTTGCCG < SRR4302543.6774981/94‑1 (MQ=60)
CTATATCGACGATCACCACGCCGTCGAAGATGCCGGCCTGGCGCTGGGCGAAGCGCTAAAAATCGCCCTCGGAGACAAACGCGGTATTTGCCGC > SRR4302543.4198380/1‑94 (MQ=60)
CTATATCGACGATCACCACACCGTCGAAGATGCCGGCCTGGCGCTGGGCGAAGCGCTAAAAATCGCCCTCGGAGACAAACGCGGTCTTTGCCGC > SRR4302543.3410795/1‑94 (MQ=60)
TATATCGACGATCACCACACCGTCGAAGATGCCGGCCTGGCGCTGGGCGAAGCGCTAAAAATCGCCCTCGGAGACAAACGCGGTATTTGCCGCT > SRR4302543.3128795/1‑94 (MQ=60)
ATATCGACGATCACCACACCGTCGAAGATGCCGGCCTGGCGCTGGGCGAAGCGCTAAAAATCGCCCTCGGAGACAAACGCGGTATTTGCCGCTT > SRR4302543.2321404/1‑94 (MQ=60)
ATATCGACGATCACCACACCGTCGAAGATGCCGGCCTGGCGCTGGGCGAAGCGCTAAAAATCGCCCTCGGAGACAAACGCGGTATTTGCCGCTT > SRR4302543.2294453/1‑94 (MQ=60)
ATCGACGATCACCACACCGTCGAAGATGCCGGCCTGGCGCTGGGCGAAGCGCTAAAAATCGCCCTCGGAGACAAACGCGGTATTTGCCGCTTTG > SRR4302543.4253314/1‑94 (MQ=60)
CGACGATCACCACACCGTCGAAGATGCCGGCCTGGCGCTGGGCGAAGCGCTAAAAATCGCCCTCGGAGACAAACGCGGTATTTGCCGCTTTGGT > SRR4302543.3010046/1‑94 (MQ=60)
GACGATCACCACCCCGTCGAAGATGCCGGCCTGGCGCTGGGCGAAGCGCTAAAAATCGCCCTCGGAGACAAACGCGGTATTTGCCGCTTTGGTT < SRR4302543.2181554/94‑1 (MQ=60)
GACGATCACCACACCGTCGAAGATGCCGGCCTGGCGCTGGGCGAAGCGCTAAAAATCGCCCTCGGAGACAAACGCGGTATTTGCCGCTTTGGTT > SRR4302543.1526000/1‑94 (MQ=60)
GATCACCACACCGTCGAAGATGCCGGCCTGGCGCTGGGCGAAGCGCTAAAAATCGCCCTCGGAGACAAACGCGGTATTTGCCGCTTTGGTTTTG < SRR4302543.6331610/94‑1 (MQ=60)
TCACCACACCGTCGAAGATGCCGGCCTGGCGCTGGGCGAAGCGCTAAAAATCGCCCTCGGAGACAAACGCGGTATTTGCCGCTTTGGTTTTGTG > SRR4302543.4830688/1‑94 (MQ=60)
CACCACACCGTCGAAGATGCCGGCCTGGCGCTGGGCGAAGCGCTAAAAATCGCCCTCGGAGACAAACGCGGTATTTGCCGCTTTGGTTTTGTGC < SRR4302543.6363794/94‑1 (MQ=60)
CACCGTCGAAGATGCCGGCCTGGCGCTGGGCGAAGCGCTAAAAATCGCCCTCGGAGACAAACGCGGTATTTGCCGCTTTGGTTTTGTGCTACCG > SRR4302543.7180355/1‑94 (MQ=60)
CACCGTCGAAGATGCCGGCCTGGCGCTGGGCGAAGCGCTAAAAATCGCCCTCGGAGACAAACGCGGTATTTGCCGCTTTGGTTTTGTGCTACCG > SRR4302543.236298/1‑94 (MQ=60)
CACCGTCGAAGATGCCGGCCTGGCGCTGGGCGAAGCGCTAAAAATCGCCCTCGGAGACAAACGCGGTATTTGCCGCTTTGGTTTTGTGCTACCG < SRR4302543.7398064/94‑1 (MQ=60)
ACCGTCGAAGATGCCGGCCTGGCGCTGGGCGAAGCGCTAAAAATCGCCCTCGGAGACAAACGCGGCATTTGCCGCTTTGGTTTTTTGCTACCGA > SRR4302543.3941245/1‑94 (MQ=60)
CCGTCGAAGATGCCGGCCTGGCGCTGGGCGAAGCGCTAAAAATCGCCCTCGGAGACAAACGCGGTATTTGCCGCTTTGGTTTTGTGCTACCGAT > SRR4302543.7654707/1‑94 (MQ=60)
CCGTCGAAGATGCCGGCCTGGCGCTGGGCGAAGCGCTAAAAATCGCCCTCGGAGACAAACGCGGTATTTGCCGCTTTGGTTTTGTGCTACCGAT < SRR4302543.1779436/94‑1 (MQ=60)
CCGTCGAAGATGCCGGCCTGGCGCTGGGCGAAGCGCTAAAAATCGCCCTCGGAGACAAACGCGGTATTTGCCGCTTTGGTTTTGTGCTACCGAT > SRR4302543.4426378/1‑94 (MQ=60)
CCGCCGAAGATGCCGGCCTGGCGCTGGGCGAAGCGCTAAAAATCGCCCTCGGAGACAAACGCGGTATTTGCCGCTTTGGTTTTGTGCTACCGAT < SRR4302543.1779437/94‑1 (MQ=60)
CGTCGAAGATGCCGGCCTGGCGCTGGGCGAAGCACTAAAAATCGCCCTCGGAGACAAACGCGGTATTTGCCGCTTTGGTTTTGTGCTACCGATG < SRR4302543.5913268/94‑1 (MQ=60)
GTCGAAGATGCCGGCCTGGCGCTGGGCGAAGCGCTAAAAATCGCCCTCGGAGACAAACGCGGTATTTGCCGCTTTGGTTTTGTGCTACCGATGG > SRR4302543.4138885/1‑94 (MQ=60)
TCGAAGATGCCGGCCTGGCGCTGGGCGAAGCGCTAAAAATCGCCCTCGGAGACAAACGCGGTATTTGCCGCTTTGGTTTTGTGCTACCGATGGA > SRR4302543.7559829/1‑94 (MQ=60)
CGAAGATGCCGGCCTGGCGCTGGGCGAAGCGCTAAAAATCGCCCTCGGAGACAAACGCGGTATTTGCCGCTTTGGTTTTGTGCTACCGATGGAC < SRR4302543.1387828/94‑1 (MQ=60)
CGAAGATGCCGGCCTGGCGCTGGGCGAAGCGCTAAAAATCGCCCTCGGAGACAAACGCGGTATTTGCCGCTTTGGTTTTGTGCTACCGATGGAC > SRR4302543.4502874/1‑94 (MQ=60)
GAAGATGCCGGCCTGGCGCTGGGCGAAGCGCTAAAAATCGCCCTCGGAGACAAACGCGGTATTTGCCGCTTTGGTTTTGTGCTACCGATGGACG < SRR4302543.3466369/94‑1 (MQ=60)
GAAGATGCCGGCCTGGCGCTGGGCGAAGCGCTAAAAATCGCCCTCGGAGACAAACGCGGTATTTGCCGCTTTGGTTTTGTGCTACCGATGGACG < SRR4302543.4795483/94‑1 (MQ=60)
GAAGATGCCGGCCTGGCGCTGGGCGAAGCGCTAAAAATCGCCCTCGGAGACAAACGCGGTATTTGCCGCTTTGGTTTTGTGCTACCGATGGACG < SRR4302543.6195112/94‑1 (MQ=60)
GAAGATGCCGGCCGGGCGCTGGGCGAAGCGCTAAAAATCGCCCTCGGAGACAAACGCGGTATTTGCCGCTTTGGTTTTGTGCTACCGATGGACG < SRR4302543.4795708/94‑1 (MQ=60)
GATGCCGGCCTGGCGCTGGGCGAAGCGCTAAAAATCGCCCTCGGAGACAAACGCGGTATTTGCCGCTTTGGTTTTGTGCTACCGATGGACGAAT < SRR4302543.7262684/94‑1 (MQ=60)
GATGCCGGCCTGGCGCTGGGCGAAGCGCTAAAAATCGCCCTCGGAGACAAACGCGGTATTTGCCGCTTTGGTTTTGTGCTACCGATGGACGAAT < SRR4302543.5001905/94‑1 (MQ=60)
ATGCCGGCCTGGCGCTGGGCGAAGCGCTAAAAATCGCCCTCGGAGACAAACGCGGTATTTGCCGCTTTGGTTTTGTGCTACCGATGGACGAATG < SRR4302543.3715563/94‑1 (MQ=60)
ATGCCGGCCTGGCGCTGGGCGAAGCGCTAAAAATCGCCCTCGGAGACAAACGCGGTATTTGCCGCTTTGGTTTTGTGCTACCGATGGACGAATG > SRR4302543.3934999/1‑94 (MQ=60)
ATGCCGGCCTGGCGCTGGGCGAAGCGCTAAAAATCGCCCTCGGAGACAAACGCGGTATTTGCCGCTTTGGTTTTGTGCTACCGATGGACGAATG < SRR4302543.2620675/94‑1 (MQ=60)
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ATGCTGGATCAGATCGCTACCCACGGCGGTTTCCGCATGGAAATCAACGTCAAAGGCGACCTCTATATCGACGATCACCACACCGTCGAAGATACCGGCCTGGCGCTGGGCGAAGCGCTAAAAATCGCCCTCGGAGACAAACGCGGTATTTGCCGCTTTGGTTTTGTGCTACCGATGGACGAATG > NC_000913/2092099‑2092283
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| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 7 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
