Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I1 R1
|
1696 |
279.3 |
15874187 |
97.8% |
15524954 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
2,225,197 |
T→C |
T32A (ACC→GCC) |
yohF ← |
putative oxidoreductase |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 2,225,197 | 0 | T | C | 100.0%
| 614.4
/ NA
| 193 | T32A (ACC→GCC) | yohF | putative oxidoreductase |
| Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (103/90); total (103/90) |
Only 100 of 196 total aligned reads displayed.
CGAGATCCAGCTGCACGATCTCCGCACGTACGCCGTGGCTAACTACCTCACGCGCGGTATCTTTTGCCCCTTCTTCATCTGAGTGCCAGGTAATACCAATATCAAACCCCTGCTGCGCCAGTAATAACGCGCACTCTTTGCCGATCCCCGAATCGGAGGCGGTAATAATCGCAACCTGTG > NC_000913/2225107‑2225286
|
cGAGATCCAGCTGCACGATCTCCGCACGTACGCCGTGGCTAACTACCTCACGCGCGGTATCTTTTGCCCCTTCTTCATCTGAGTGCCAGGCaa > 2:2044683/1‑93 (MQ=255)
gaTCCAGCTGCACGATCTCCGCACGTACGCCGTGGCTAACTACCTCACGCGCGGTATCTTTTGCCCCTTCTTCATCTGAGTGCCAGGCAATAc < 2:271314/93‑1 (MQ=255)
ccAGCTGCACGATCTCCGCACGTACGCCGTGGCTAACTACCTCACGCGCGGTATCTTTTGCCCCTTCTTCATCTGAGTGCCAGGCAATACCaa < 1:4592508/93‑1 (MQ=255)
cAGCTGCACGATCTCCGCACGTACGCCGTGGCTAACTACCTCACGCGCGGTATCTTTTGCCCCTTCTTCATCTGAGTGCCAGGCAATACCAat < 1:525064/93‑1 (MQ=255)
cAGCTGCACGATCTCCGCACGTACGCCGTGGCTAACTACCTCACGCGCGGTATCTTTTGCCCCTTCTTCATCTGAGTGCCAGGCAATACCAat > 2:1789356/1‑93 (MQ=255)
cAGCTGCACGATCTCCGCACGTACGCCGTGGCTAACTACCTCACGCGCGGTATCTTTTGCCCCTTCTTCATCTGAGTGCCAGGCAATACCAat < 2:4414061/93‑1 (MQ=255)
cgCTGCACGATCTCCTCACGTACGCCGTGGCTAACTACCTCACGCGCGGTATCTTTTGCCCCTTCTTCATCTGAGTGCCAGGCAATACCAata < 2:5593104/92‑1 (MQ=255)
aGCTGCACGATCTCCGCACGTACGCCGTGGCTAACTACCTCACGCGCGGTATCTTTTGCCCCTTCTTCATCTGAGTGCCAGGCAATACCAata > 2:4600473/1‑93 (MQ=255)
aGCTGCACGATCTCCGCACGTACGCCGTGGCTAACTACCTCACGCGCGGTATCTTTTGCCCCTTCTTCATCTGAGTGCCAGGCAATACCAata < 2:1735016/93‑1 (MQ=255)
aGCTGCACGATCTCCGCACGTACGCCGTGGCTAACTACCTCACGCGCGGTATCTTTTGCCCCTTCTTCATCTGAGTGCCAGGCAATACCAata < 2:7131965/93‑1 (MQ=255)
aGCTGCACGATCTCCGCACGTACGCCGTGGCTAACTACCTCACGCGCGGTATCTTTTGCCCCTTCTTCATCTGAGTGCCAGGCAATACCAata > 1:335801/1‑93 (MQ=255)
aGCTGCACGATCTCCGCACGTACGCCGTGGCTAACTACCTCACGCGCGGTATCTTTTGCCCCTTCTTCATCTGAGTGCCAGGCAATACCAata < 2:3512892/93‑1 (MQ=255)
gCTGCACGATCTCCGCACGTACGCCGTGGCTAACTACCTCACGCGCGGTATCTTTTGCCCCTTCTTCATCTGAGTGCCAGGCAATACCAatat > 1:543554/1‑93 (MQ=255)
gCTGCACGATCTCCGCACGTACGCCGTGGCTAACTACCTCACGCGCGGTATCTTTTGCCCCTTCTTCATCTGAGTGCCAGGCAATACCAatat > 1:1399589/1‑93 (MQ=255)
gCTGCACGATCTCCGCACGTACGCCGTGGCTAACTACCTCACGCGCGGTATCTTTTGCCCCTTCTTCATCTGAGTGCCAGGCAATACCAatat > 2:4085044/1‑93 (MQ=255)
cTGCACGATCTCCGCACGTACGCCGTGGCTAACTACCTCACGCGCGGTATCTTTTGCCCCTTCTTCATCTGAGTGCCAGGCAATACCAATATc > 1:3965249/1‑93 (MQ=255)
tGCACGATCTCCGCACGTACGCCGTGGCTAACTACCTCACGCGCGGTATCTTTTGCCCCTTCTTCATCTGAGTGCCAGGCAATACCAATATCa > 2:3371796/1‑93 (MQ=255)
cGATCTCCGCACGTACGCCGTGGCTAACTACCTCACGCGCGGTATCTTTTGCCCCTTCTTCATCTGAGTGCCAGGCAATACCAATATCAAAcc < 1:4963697/93‑1 (MQ=255)
aTCTCCGCACGTACGCCGTGGCTAACTACCTCACGCGCGGTATCTTTTGCCCCTTCTTCATCTGAGTGCCAGGCAATACCAATATCAAAcccc < 1:2205150/93‑1 (MQ=255)
aTCTCCGCACGTACGCCGTGGCTAACTACCTCACGCGCGGTATCTTTTGCCCCTTCTTCATCTGAGTGCCAGGCAATACCAATATCAAAcccc > 1:792586/1‑93 (MQ=255)
aTCTCCGCACGTACGCCGTGGCTAACTACCTCACGCGCGGTATCTTTTGCCCCTTCTTCATCTGAGTGCCAGGCAATACCAATATCAAAcccc < 1:78727/93‑1 (MQ=255)
tctcCGCACGTACGCCGTGGCTAACTACCTCACGCGCGGTATCTTTTGCCCCTTCTTCATCTGAGTGCCAGGCAATACCAATATCAAACCCct < 2:2850028/93‑1 (MQ=255)
tctcCGCACGTACGCCGTGGCTAACTACCTCACGCGCGGTATCTTTTGCCCCTTCTTCATCTGAGTGCCAGGCAATACCAATATCAAACCCct < 2:1560329/93‑1 (MQ=255)
ctcCGCACGTACGCCGTGGCTAACTACCTCACGCGCGGTATCTTTTGCCCCTTCTTCATCTGAGTGCCAGGCAATACCAATATCAAACCCctg < 1:4081457/93‑1 (MQ=255)
ctcCGCACGTACGCCGTGGCTAACTACCTCACGCGCGGTATCTTTTGCCCCTTCTTCATCTGAGTGCCAGGCAATACCAATATCAAACCCctg > 1:4959231/1‑93 (MQ=255)
tcCGCACGTACGCCGTGGCTAACTACCTCACGCGCGGTATCTTTTGCCCCTTCTTCATCTGAGTGCCAGGCAATACCAATATCAAACCCctgc < 2:3983093/93‑1 (MQ=255)
tcCGCACGTACGCCGTGGCTAACTACCTCACGCGCGGTATCTTTTGCCCCTTCTTCATCTGAGTGCCAGGCAATACCAATATCAAACCCctgc > 2:3765618/1‑93 (MQ=255)
gCACGTACGCCGTGGCTAACTACCTCACGCGCGGTATCTTTTGCCCCTTCTTCATCTGAGTGCCAGGCAATACCAATATCAAACCCCtgctgc > 2:2416561/1‑93 (MQ=255)
aCGTACGCCGTGGCTAACTACCTCACGCGCGGTATCTTTTGCCCCTTCTTCATCTGAGTGCCAGGCAATACCAATATCAAACCCCTGCTgcgc > 2:5149425/1‑93 (MQ=255)
cGTACGCCGTGGCTAACTACCTCACGCGCGGTATCTTTTGCCCCTTCTTCATCTGAGTGCCAGGCAATACCAATATCAAACCCCTGCTGCGcc > 2:1258200/1‑93 (MQ=255)
cGTACGCCGTGGCTAACTACCTCACGCGCGGTATCTTTTGCCCCTTCTTCATCTGAGTGCCAGGCAATACCAATATCAAACCCCTGCTGCGcc > 2:2957448/1‑93 (MQ=255)
gTACGCCGTGGCTAACTACCTCACGCGCGGTATCTTTTGCCCCTTCTTCATCTGAGTGCCAGGCAATACCAATATCAAACCCCTGCTGCGCCa < 1:7523947/93‑1 (MQ=255)
tACGCCGTGGCTAACTACCTCACGCGCGGTATCTTTTGCCCCTTCTTCATCTGAGTGCCGGGCAATACCAATATCAAACCCCTGCTGCGCCAg > 1:7180674/1‑93 (MQ=255)
tACGCCGTGGCTAACTACCTCACGCGCGGTATCTTTTGCCCCTTCTTCATCTGAGTGCCAGGCAGTACCAATATCAAACCCCTGCTGCGCCAg > 2:2812227/1‑93 (MQ=255)
tACGCCGTGGCTAACTACCTCACGCGCGGTATCTTTTGCCCCTTCTTCATCTGAGTGCCAGGCAATACCAATATCAAACCCCTGCTGCGCCAg > 1:4339682/1‑93 (MQ=255)
tACGCCGTGGCTAACTACCTCACGCGCGGTATCTTTTGCCCCTTCTTCATCTGAGTGCCAGGCAATACCAATATCAAACCCCTGCTGCGCCAg > 2:7334156/1‑93 (MQ=255)
aCGCCGTGGCTAACTACCTCACGCGCGGTATCTTTTGCCCCTTCTTCATCTGAGTGCCAGGCAATACCAATATCAAACCCCTGCTGCGCCAGt > 2:85595/1‑93 (MQ=255)
aCGCCGTGGCTAACTACCTCACGCGCGGTATCTTTTGCCCCTTCTTCATCTGAGTGCCAGGCAATACCAATATCAAACCCCTGCTGCGCCAGt > 1:3060575/1‑93 (MQ=255)
aCGCCGTGGCTAACTACCTCACGCGCGGTATCTTTTGCCCCTTCTTCATCTGAGTGCCAGGCAATACCAATATCAAACCCCTGCTGCGCCAGt < 1:4729637/93‑1 (MQ=255)
gCCGTGGCTAACTACCTCACGCGCGGTATCTTTTGCCCCTTCTTCATCTGAGTGCCAGGCAATACCAATATCAAACCCCTGCTGCGCCAGtaa > 2:841002/1‑93 (MQ=255)
gCCGTGGCTAACTACCTCACGCGCGGTATCTTTTGCCCCTTCTTCATCTGAGTGCCAGGCAATACCAATATCAAACCCCTGCTGCGCCAGtaa < 1:7627306/93‑1 (MQ=255)
gCCGTGGCTAACTACCTCACGCGCGGTATCTTTTGCCCCTTCTTCATCTGAGTGCCAGGCAATACCAATATCAAACCCCTGCTGCGCCAGtaa > 2:5786890/1‑93 (MQ=255)
gCCGTGGCTAACTACCTCACGCGCGGTATCTTTTGCCCCTTCTTCATCTGAGTGCCAGGCAATACCAATATCAAACCCATGCTGCGCCAGtaa > 2:2697630/1‑93 (MQ=255)
ccGTGGCTAACTACCTCACGCGCGGTATCTTTTGCCCCTTCTTCATCTGAGTGCCAGGCAATACCAATATCAAACCCCTGCTGCGCCAGtaat < 2:3314653/93‑1 (MQ=255)
cGTGGCTAACTACCTCACGCGCGGTATCTTTTGCCCCTTCTTCATCTGAGTGCCAGGCAATACCAATATCAAACCCCTGCTGCGCCAGtaata < 1:4850887/93‑1 (MQ=255)
cGTGGCTAACTACCTCACGCGCGGTATCTTTTGCCCCTTCTTCATCTGAGTGCCAGGCAATACCAATATCAAACCCCTGCTGCGCCAGtaata > 2:6103935/1‑93 (MQ=255)
cGTGGCTAACTACCTCACGCGCGGTATCTTTTGCCCCTTCTTCATCTGAGTGCCAGGCAATACCAATATCAAACCCCTGCTGCGCCAGtaata < 2:3046373/93‑1 (MQ=255)
tGGCTAACTGCCTCACGCGCGGTATCTTTTGCCCCTTCTTCATCTGAGTGCCAGGCAATACCAATATCAAACCCCTGCTGCGCCAGTAATAAc > 2:5244065/1‑93 (MQ=255)
tGGCTAACTACCTCACGCGCGGTATCTTTTGCCCCTTCTTCATCTGAGTGCCAGGCAATACCAATATCAAACCCCTGCTGCGCCAGTAATAAc < 1:3044262/93‑1 (MQ=255)
tGGCTAACTACCTCACGCGCGGTATCTTTTGCCCCTTCTTCATCTGAGTGCCAGGCAATACCAATATCAAACCCCTGCTGCGCCAGTAATAAc < 2:2530305/93‑1 (MQ=255)
gCTAACTACCTCACGCGCGGTATCTTTTGCCCCTTCTTCATCTGAGTGCCAGGCAATACCAATATCAAACCCCTGCTGCGCCAGTAATAAcgc > 1:6318247/1‑93 (MQ=255)
gCTAACTACCTCACGCGCGGTATCTTTTGCCCCTTCTTCATCTGAGTGCCAGGCAATACCAATATCAAACCCCTGCTGCGCCAGTAATAAcgc > 2:4266970/1‑93 (MQ=255)
gCTAACTACCTCACGCGCGGTATCTTTTGCCCCTTCTTCATCTGAGTGCCAGGCAATACCAATATCAAACCCCTGCTGCGCCAGTAATAAcgc < 1:2379055/93‑1 (MQ=255)
cTAACTACCTCACGCGCGGTATCTTTTGCCCCTTCTTCATCTGAGTGCCAGGCAATACCAATATCAAACCCCTGCTGCGCCAGTAATAAcgcg < 1:5763164/93‑1 (MQ=255)
aaCTACCTCACGCGCGGTATCTTTTGCCCCTTCTTCATCTGAGTGCCAGGCAATACCAATATCAAACCCCTGCTGCGCCAGTAATAACGCGCa > 2:203209/1‑93 (MQ=255)
aCTACCTCACGCGCGGTATCTTTTGCCCCTTCTTCATCTGAGTGCCAGGCAATACCAATATCAAACCCCTGCTGCGCCAGTAATAACGCGCAc > 2:3150570/1‑93 (MQ=255)
cTACCTCACGCGCGGTATCTTTTGCCCCTTCTTCATCTGAGTGCCAGGCAATACCAATATCAAACCCCTGCTGCGCCAGTAATAACGCGCAct < 1:1132527/93‑1 (MQ=255)
tACCTGCCGCGTCGTATCTTTTGCCCCTTCTTCATCTGAGTGCCAGGCAATACCAATATCAAACCCCGGCTGCGCCAGTAATAACGCGCActc < 1:4221005/93‑1 (MQ=255)
tACCTCACGCGCGGTATCTTTTGCCCCTTCTTCATCTGAGTGCCAGGCAATACCAATATCAAACCCCTGCTGCGCCAGTAATAACGCGCActc < 2:6755104/93‑1 (MQ=255)
ccTCACGCGCGGTATCTTTTGCCCCTTCTTCATCTGAGTGCCAGGCAATACCAATATCAAACCCCTGCTGCGCCAGTAATAACGCGCACTCtt < 2:1936869/93‑1 (MQ=255)
cTCACGCGCGGTATCTTTTGCCCCTTCTTCATCTGAGTGCCAGGCAATACCAATATCAAACCCCTGCTGCGCCAGTAATAACGCGCACTCttt < 1:6200076/93‑1 (MQ=255)
cTCACGCGCGGTATCTTTTGCCCCTTCTTCATCTGAGTGCCAGGCAATACCAATATCAAACCCCTGCTGCGCCAGTAATAACGCGCACTCttt > 2:3230146/1‑93 (MQ=255)
tCACGCGCGGTATCTTTTGCCCCTTCTTCATCTGAGTGCCAGGCAATACCAATATCAAACCCCTGCTGCGCCAGTAATAACGCGCACTTTTTg < 2:7037999/93‑1 (MQ=255)
tCACGCGCGGTATCTTTTGCCCCTTCTTCATCTGAGTGCCAGGCAATACCAATATCAAACCCCTGCTGCGCCAGTAATAACGCGCACTCTTTg > 1:1617721/1‑93 (MQ=255)
tCACGCGCGGTATCTTTTGCCCCTTCTTCATCTGAGTGCCAGGCAATACCAATATCAAACCCCTGCTGCGCCAGTAATAACGCGCACTCTTTg < 1:453407/93‑1 (MQ=255)
cACGCGCGGTATCTTTTGCCCCTTCTTCATCTGAGTGCCAGGCAATACCAATATCAAACCCCTGCTGCGCCAGTAATAACGCGCACTCTTTGc > 1:3522157/1‑93 (MQ=255)
gcgcgGTATCTTTTGCCCCTTCTTCATCTGAGTGCCAGGCAATACCAATATCAAACCCCTGCTGCGCCAGTAATAACGCGCACTCTTTGCCGa > 1:6011379/1‑93 (MQ=255)
gcgcgGTATCTTTTGCCCCTTCTTCATCTGAGTGCCAGGCAATACCAATATCAAACCCCTGCTGCGCCAGTAATAACGCGCACTCTTTGCCGa > 1:6358716/1‑93 (MQ=255)
cgcgGTATCTTTTGCCCCTTCTTCATCTGAGTGCCAGGCAATACCAATATCAAACCCCTGCTGCGCCAGTAATAACGCGCACTCTTTGCCGAt < 1:1974445/93‑1 (MQ=255)
gcgGTATCTTTTGCCCCTTCTTCATCTGAGTGCCAGGCAATACCAATATCAAACCCCTGCTGCGCCAGTAATAACGCGCACTCTTTGCCGATc > 1:337407/1‑93 (MQ=255)
gcgGTATCTTTTGCCCCTTCTTCATCTGAGTGCCAGGCAATACCAATATCAAACCCCTGCTGCGCCAGTAATAACGCGCACTCTTTGCCGATc < 2:5123245/93‑1 (MQ=255)
gTATCTTTTGCCCCTTCTTCATCTGAGTGCCAGGCAATACCAATATCAAACCCCTGCTGCGCCAGTAATAACGCGCACTCTTTGCCGATcccc > 2:1598335/1‑93 (MQ=255)
cTTTTGCCCCTTCTTCATCTGAGTGCCAGGCAATACCAATATCAAACCCCTGCTGCGCCAGTAATAACGCGCACTCTTTGCCGATCCCCGAAt < 1:3600263/93‑1 (MQ=255)
ttttGCCCCTTCTTCATCTGAGTGCCAGGCAATACCAATATCAAACCCCTGCTGCGCCAGTAATAACGCGCACTCTTTGCCGATCCCCGAATc < 2:6589945/93‑1 (MQ=255)
tGCCCCTTCTTCATCTGAGTGCCAGGCAATACCAATATCAAACCCCTGCTGCGCCAGTAATAACGCGCACTCTTTGCCGATCCCCGAATCGGa < 1:5039069/93‑1 (MQ=255)
gCCCCTTCTTCATCTGAGTGCCAGGCAATACCAATATCAAACCCCTGCTGCGCCAGTAATAACGCGCACTCTTTGCCGATCCCCGAATCGGAg < 1:4066847/93‑1 (MQ=255)
ccccTTCTTCATCTGAGTGCCAGGCAATACCAATATCAAACCCCTGCTGCGCCAGTAATAACGCGCACTCTTTGCCGATCCCCGAATCGGAgg > 2:7535429/1‑93 (MQ=255)
cccTTCTTCATCTGAGTGCCAGGCAATACCAATATCAAACCCCTGCTGCGCCAGTAATAACGCGCCCTCTTTGCCGATCCCCGAATCGGAGGc < 1:3087767/93‑1 (MQ=255)
cccTTCTTCATCTGAGTGCCAGGCAATACCAATATCAAACCCCTGCTGCGCCAGTAATAACGCGCACTCTTTGCCGATCCCCGAATCGGAGGc > 1:5291683/1‑93 (MQ=255)
cccTTCTTCATCTGAGTGCCAGGCAATACCAATATCAAACCCCTGCTGCGCCAGTAATAACGCGCACTCTTTGCCGATCCCCGAATCGGAGGc > 2:1475681/1‑93 (MQ=255)
ccTTCTTCATCTGAGTGCCAGGCAATACCAATATCAAACCCCTGCTGCGCCAGTAATAACGCGCACTCTTTGCCGATCCCCGAATCGGAGGCg > 2:6218286/1‑93 (MQ=255)
ccTTCTTCATCTGAGTGCCAGGCAATACCAATATCAAACCCCTGCTGCGCCAGTAATAACGCGCACTCTTTGCCGATCCCCGAATCGGAGGCg > 1:269923/1‑93 (MQ=255)
cttcttCATCTGAGTGCCAGGCAATACCAATATCAAACCCCTGCTGCGCCAGTAATAACGCGCACTCTTTGCCGATCCCCGAATCGGAGGCgg > 1:6874032/1‑93 (MQ=255)
ttcttcATCTGAGTGCCAGGCAATACCAATATCAAACCCCTGCTGCGCCAGTAATAACGCGCACTCTTTGCCGATCCCCGAATCGGAGGCGGt < 1:856911/93‑1 (MQ=255)
ttcATCTGAGTGCCAGGCAATACCAATATCAAACCCCTGCTGCGCCAGTAATAACGCGCACTCTTTGCCGATCCCCGAATCGGAGGCGGtaat > 1:2297669/1‑93 (MQ=255)
ttcATCTGAGTGCCAGGCAATACCAATATCAAACCCCTGCTGCGCCAGTAATAACGCGCACTCTTTGCCGATCCCCGAATCGGAGGCGGtaat > 2:6161547/1‑93 (MQ=255)
ttcATCTGAGTGCCAGGCAATACCAATATCAAACCCCTGCTGCGCAAGTAATAACGCGCGCTCTTTGCCGATCCCCGAATCGGAGGCGGtaat < 2:6075486/93‑1 (MQ=255)
tcATCTGAGTGCCAGGCAATACCAATATCAAACCCCTGCTGCGCCAGTAATAACGCGCACTCTTTGCCGATCCCCGAATCGGAGGCGGtaata < 2:6471493/93‑1 (MQ=255)
cATCTGAGTGCCAGGCAATACCAATATCAAACCCCTGCTGCGCCAGTAATAACGCGCACTCTTTGCCGATCCCCGAATCGGAGGCGGtaataa > 1:38529/1‑93 (MQ=255)
cATCTGAGTGCCAGGCAATACCAATATCAAACCCCTGCTGCGCCAGTAATAACGCGCACTCTTTGCCGATCCCCGAATCGGAGGCGGtaataa < 1:7013634/93‑1 (MQ=255)
tCTGAGTGCCAGGCAATACCAATATCAAACCCCTGCTGCGCCAGTAATAACGCGCACTCTTTGCCGATCCCCGAATCGGAGGCGGTAATAATc > 1:3751271/1‑93 (MQ=255)
tCTGAGTGCCAGGCAATACCAATATCAAACCCCTGCTGCGCCAGTAATAACGCGCACTCTTTGCCGATCCCCGAATCGGAGGCGGTAATAATc < 1:3287946/93‑1 (MQ=255)
tCTGAGTGCCAGGCAATACCAATATCAAACCCCTGCTGCGCCAGTAATAACGCGCACTCTTTGCCGATCCCCGAATCGGAGGCGGTAATAATc < 1:1715484/93‑1 (MQ=255)
tGAGTGCCAGGCAATACCAATATCAAACCCCTGCTGCGCCAGTAATAACGCGCACTCTTTGCCGATCCCCGAATCGGAGGCGGTAATAATCGc > 2:3826490/1‑93 (MQ=255)
gTGCCAGGCAATACCAATATCAAACCCCTGCTGCGCCAGTAATAACGCGCACTCTTTGCCGATCCCCGAATCGGAGGCGGTAATAATCGCAAc < 2:7694083/93‑1 (MQ=255)
tGCCAGGCAATACCAATATCAAACCCCTGCTGCGCCAGTAATAACGCGCACTCTTTGCCGATCCCCGAATCGGAGGCGGTAATAATCGCAAcc < 1:4118786/93‑1 (MQ=255)
tGCCAGGCAATACCAATATCAAACCCCTGCTGCGCCAGTAATAACGCGCACTCTTTGCCGATCCCCGAATCGGAGGCGGTAATAATCGCAAcc < 1:2070002/93‑1 (MQ=255)
ccAGGCAATACCAATATCAAACCCCTGCTGCGCCAGTAATAACGCGCACTCTTTGCCGATCCCCGAATCGGAGGCGGTAATAATCGCAACCtg < 1:184930/93‑1 (MQ=255)
ccAGGCAATACCAATATCAAACCCCTGCTGCGCCAGTAATAACGCGCACTCTTTGCCGATCCCCGAATCGGAGGCGGTAATAATCGCAACCtg < 1:1937658/93‑1 (MQ=255)
aGGCAATACCAATATCAAACCCCTGCTGCGCCAGTAATAACGCGCACTCTTTGCCGATCCCCGAATCGGAGGCGGTAATAATCGCAACCtgtg > 1:1158818/1‑93 (MQ=255)
|
CGAGATCCAGCTGCACGATCTCCGCACGTACGCCGTGGCTAACTACCTCACGCGCGGTATCTTTTGCCCCTTCTTCATCTGAGTGCCAGGTAATACCAATATCAAACCCCTGCTGCGCCAGTAATAACGCGCACTCTTTGCCGATCCCCGAATCGGAGGCGGTAATAATCGCAACCTGTG > NC_000913/2225107‑2225286
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
TGCCGAGATCCAGCTGCACGATCTCCGCACGTACGCCGTGGCTAACTACCTCACGCGCGGTATCTTTTGCCCCTTCTTCATCTGAGTGCCAGGTAATACCAATATCAAACCCCTGCTGCGCCAGTAATAACGCGCACTCTTTGCCGATCCCCGAATCGGAGGCGGTAATAATCGCAACCTGTGCCAT > NC_000913/2225104‑2225290
|
TGCCGAGATCCAGCTGCACGATCTCCGCACGTACGCCGTGGCTAACTACCTCACGCGCGGTATCTTTTGCCCCTTCTTCATCTGAGTGCCAGGC < SRR4302543.4727126/94‑1 (MQ=60)
GAGATCCAGCTGCACGATCTCCGCACGTACGCCGTGGCTAACTACCTCACGCGCGGTATCTTTTGCCCCTTCTTCATCTGAGTGCCAGGCAATA > SRR4302543.6358644/1‑94 (MQ=60)
AGATCCAGCTGCACGATCTCCGCACGTACGCCGTGGCTAACTACCTCACGCGCGGTATCTTTTGCCCCTTCTTCATCTGAGTGCCAGGCAATAC < SRR4302543.4023000/94‑1 (MQ=60)
GATCCAGCTGCACGATCTCCGCACGTACGCCGTGGCTAACTACCTCACGCGCGGTATCTTTTGCCCCTTCTTCATCTGAGTGCCAGGCAATACC > SRR4302543.1207246/1‑94 (MQ=60)
ATCCAGCTGCACGATCTCCGCACGTACGCCGTGGCTAACTACCTCACGCGCGGTATCTTTTGCCCCTTCTTCATCTGAGTGCCAGGCAATACCA < SRR4302543.1983413/94‑1 (MQ=60)
CCAGCTGCACGATCTCCGCACGTACGCCGTGGCTAACTACCTCACGCGCGGTATCTTTTGCCCCTTCTTCATCTGAGTGCCAGGCAATACCAAT < SRR4302543.2040971/94‑1 (MQ=60)
CCAGCTGCACGATCTCCGCACGTACGCCGTGGCTAACTACCTCACGCGCGGTATCTTTTGCCCCTTCTTCATCTGAGTGCCAGGCAATACCAAT < SRR4302543.4634218/94‑1 (MQ=60)
CAGCTGCACGATCTCCGCACGTACGCCGTGGCTAACTACCTCACGCGCGGTATCTTTTGCCCCTTCTTCATCTGAGTGCCAGGCAATACCAATA < SRR4302543.529918/94‑1 (MQ=60)
CAGCTGCACGATCTCCGCACGTACGCCGTGGCTAACTACCTCACGCGCGGTATCTTTTGCCCCTTCTTCATCTGAGTGCCAGGCAATACCAATA < SRR4302543.2102856/94‑1 (MQ=60)
CAGCTGCACGATCTCCGCACGTACGCCGTGGCTAACTACCTCACGCGCGGTATCTTTTGCCCCTTCTTCATCTGAGTGCCAGGCAATACCAATA > SRR4302543.338888/1‑94 (MQ=60)
AGCTGCACGATCTCCGCACGTACGCCGTGGCTAACTACCTCACGCGCGGTATCTTTTGCCCCTTCTTCATCTGAGTGCCAGGCAATACCAATAT < SRR4302543.5307234/94‑1 (MQ=60)
AGCTGCACGATCTCCGCACGTACGCCGTGGCTAACTACCTCACGCGCGGTATCTTTTGCCCCTTCTTCATCTGAGTGCCAGGCAATACCAATAT > SRR4302543.548574/1‑94 (MQ=60)
AGCTGCACGATCTCCGCACGTACGCCGTGGCTAACTACCTCACGCGCGGTATCTTTTGCCCCTTCTTCATCTGAGTGCCAGGCAATACCAATAT > SRR4302543.1412219/1‑94 (MQ=60)
GCTGCACGATCTCCGCACGTACGCCGTGGCTAACTACCTCACGCGCGGTATCTTTTGCCCCTTCTTCATCTGAGTGCCAGGCAATACCAATATC < SRR4302543.5215598/94‑1 (MQ=60)
GCTGCACGATCTCCGCACGTACGCCGTGGCTAACTACCTCACGCGCGGTATCTTTTGCCCCTTCTTCATCTGAGTGCCAGGCAATACCAATATC > SRR4302543.4000369/1‑94 (MQ=60)
GCACGATCTCCGCACGTACGCCGTGGCTAACTACCTCACGCGCGGTATCTTTTGCCCCTTCTTCATCTGAGTGCCAGGCAATACCAATATCAAA < SRR4302543.4818370/94‑1 (MQ=60)
CACGATCTCCGCACGTACGCCGTGGCTAACTACCTCACGCGCGGTATCTTTTGCCCCTTCTTCATCTGAGTGCCAGGCAATACCAATATCAAAC > SRR4302543.381415/1‑94 (MQ=60)
CACGATCTCCGCACGTACGCCGTGGCTAACTACCTCACGCGCGGTATCTTTTGCCCCTTCTTCATCTGAGTGCCAGGCAATACCAATATCAAAC < SRR4302543.6400231/94‑1 (MQ=60)
ACGATCTCCGCACGTACGCCGTGGCTAACTACCTCACGCGCGGTATCTTTTGCCCCTTCTTCATCTGAGTGCCAGGCAATACCAATATCAAACC > SRR4302543.2489647/1‑94 (MQ=60)
CGATCTGCGCACGTACGCCGTGGCTACCTACCTCACGCGCGGTATCTTTTGCCCCTTCTTCATCTGAGTGCCAGGCAATACCAATATCAAACCC < SRR4302543.5008880/94‑1 (MQ=60)
CGATCTCCGCACGTACGCCGTGGCTAACTACCTCACGCGCGGTATCTTTTGCCCCTTCTTCATCTGAGTGCCAGGCAATACCAATATCAAACCC < SRR4302543.5008881/94‑1 (MQ=60)
GATCTCCGCACGTACGCCGTGGCTAACTACCTCACGCGCGGTATCTTTTGCCCCTTCTTCATCTGAGTGCCAGGCAATACCAATATCAAACCCC > SRR4302543.799551/1‑94 (MQ=60)
ATCTCCGCCAGTTCGCCGTGGCTAACTTCCTCACGCGCCGTATCTTTTGCCCCTTCTTCATCTGAGTGCCAGGCAATACCAATATCAAACCCCT < SRR4302543.2225004/94‑1 (MQ=60)
ATCTCCGCACGTACGCCGTGGCTAACTACCTCACGCGCGGTATCTTTTGCCCCTTCTTCATCTGAGTGCCAGGCAATACCAATATCAAACCCCT > SRR4302543.3544459/1‑94 (MQ=60)
ATCTCCGCACGTACGCCGTGGCTAACTACCTCACGCGCGGTATCTTTTGCCCCTTCTTCATCTGAGTGCCAGGCAATACCAATATCAAACCCCT < SRR4302543.2225003/94‑1 (MQ=60)
ATCTCCGCACGTACGCCGTGGCTAACTACCTCACGCGCGGTATCTTTTGCCCCTTCTTCATCTGAGTGCCAGGCAATACCAATATCAAACCCCT < SRR4302543.2892332/94‑1 (MQ=60)
ATCTCCGCACGTACGCCGTGGCTAACTACCTCACGCGCGGTATCTTTTGCCCCTTCTTCATCTGAGTGCCAGGCAATACCAATATCAAACCCCT < SRR4302543.79461/94‑1 (MQ=60)
TCTCCGCACGTACGCCGTGGCTAACTACCTCACGCGCGGTATCTTTTGCCCCTTCTTCATCTGAGTGCCAGGCAATACCAATATCAAACCCCTG > SRR4302543.5004375/1‑94 (MQ=60)
CTCCGCACGTACGCCGTGGCTAACTACCTCACGCGCGGTATCTTTTGCCCCTTCTTCATCTGAGTGCCAGGCAATACCAATATCAAACCCCTGC < SRR4302543.4118042/94‑1 (MQ=60)
GTACGCCGTGGCTAACTACCTCACGCGCGGTATCTTTTGCCCCTTCTTCATCTGAGTGCCGGGCAATACCAATATCAAACCCCTGCTGCGCCAG > SRR4302543.7250361/1‑94 (MQ=60)
GTACGCCGTGGCTAACTACCTCACGCGCGGTATCTTTTGCCCCTTCTTCATCTGAGTGCCAGGCAATACCAATATCAAACCCCTGCTGCGCCAG > SRR4302543.4379047/1‑94 (MQ=60)
GTACGCCGTGGCTAACTACCTCACGCGCGGTATCTTTTGCCCCTTCTTCATCTGAGTGCCAGGCAATACCAATATCAAACCCCTGCTGCGCCAG < SRR4302543.7595740/94‑1 (MQ=60)
CTACGCCGTGGCTAACTACCTCACGCGCGGTATCTTTTGCCCCTTCTTCATCTGAGTGCCAGGCAATACCAATATCAAACCCCTGCTGCGCCAG < SRR4302543.1821604/94‑1 (MQ=60)
TACGCCGTGGCTAACTACCTCACGCGCGGTATCTTTTGCCCCTTCTTCATCTGAGTGCCAGGCAATACCAATATCAAACCCCTGCTGCGCCAGT > SRR4302543.3088109/1‑94 (MQ=60)
ACGCCGTGGCTAACTACCTCACGCGCGGTATCTTTTGCCCCTTCTTCATCTGAGTGCCAGGCAATACCAATATCAAACCCCTGCTGCGCCAGTA < SRR4302543.4772847/94‑1 (MQ=60)
CGCCGTGGCTAACTACCTCACGCGCGGTATCTTTTGCCCCTTCTTCATCTGAGTGCCAGGCAATACCAATATCAAACCCCTGCTGCGCCAGTAA < SRR4302543.339979/94‑1 (MQ=60)
GCCGTGGCTAACTACCTCACGCGCGGTATCTTTTGCCCCTTCTTCATCTGAGTGCCAGGCAATACCAATATCAAACCCCTGCTGCGCCAGTAAT < SRR4302543.7699692/94‑1 (MQ=60)
GCCGTGGCTAACTACCTCACGCGCGGTATCTTTTGCCCCTTCTTCATCTGAGTGCCAGGCAATACCAATATCAAACCCCTGCTGCGCCAGTAAT < SRR4302543.7955063/94‑1 (MQ=60)
CGTGGCTAACTACCTCACGCGCGGTATCTTTTGCCCCTTCTTCATCTGAGTGCCAGGCAATACCAATATCAAACCCCTGCTGCGCCAGTAATAA < SRR4302543.3326419/94‑1 (MQ=60)
CGTGGCTAACTACCTCACGCGCGGTATCTTTTGCCCCTTCTTCATCTGAGTGCCAGGCAATACCAATATCAAACCCCTGCTGCGCCAGTAATAA < SRR4302543.4895121/94‑1 (MQ=60)
CGTGGCTAACTACCTCACGCGCGGTATCTTTTGCCCCTTCTTCATCTGAGTGCCAGGCAATACCAATATCAAACCCCTGCTGCGCCAGTAATAA > SRR4302543.5428644/1‑94 (MQ=60)
TGGCTAACTACCTCACGCGCGGTATCTTTTGCCCCTTCTTCATCTGAGTGCCAGGCAATACCAATATCAAACCCCTGCTGCGCCAGTAATAACG < SRR4302543.3071711/94‑1 (MQ=60)
GGCTAACTACCTCACGCGCGGTATCTTTTGCCCCTTCTTCATCTGAGTGCCAGGCAATACCAATATCAAACCCCTGCTGCGCCAGTAATAACGC > SRR4302543.6377668/1‑94 (MQ=60)
GCTAACTACCTCACGCGCGGTATCTTTTGCCCCTTCTTCATCTGAGTGCCAGGCAATACCAATATCAAACCCCTGCTGCGCCAGTAATAACGCG < SRR4302543.2400603/94‑1 (MQ=60)
CTAACTACCTCACGCGCGGTATCTTTTGCCCCTTCTTCATCTGAGTGCCAGGCAATACCAATATCAAACCCCTGCTGCGCCAGTAATAACGCGC < SRR4302543.5815661/94‑1 (MQ=60)
TAACTACCTCACGCGCGGTATCTTTTGCCCCTTCTTCATCTGAGTGCCAGGCAATACCAATATCAAACCCCTGCTGCGCCAGTAATAACGCGCA > SRR4302543.7459076/1‑94 (MQ=60)
CTACCTCACGCGCGGTATCTTTTGCCCCTTCTTCATCTGAGTGCCAGGCAATACCAATATCAAACCCCTGCTGCGCCAGTAATAACGCGCACTC < SRR4302543.1142811/94‑1 (MQ=60)
tacctgccgcgtcGTATCTTTTGCCCCTTCTTCATCTGAGTGCCAGGCAATACCAATATCAAACCCCGGCTGCGCCAGTAATAACGCGCACTCT < SRR4302543.4259271/81‑1 (MQ=60)
TACCTCACGCGCGGTATCTTTTGCCCCTTCTTCATCTGAGTGCCAGGCAATACCAATATCAAACCCCTGCTGCGCCAGTAATAACGCGCACTCT < SRR4302543.4259270/94‑1 (MQ=60)
CCTCACGCGCTGTATCTTTTGCCCCTTCTTCATCTGAGTGCCAGGCAATACCAATATCAAACCCCTGCTGCGCCAGTAATAACGCGCACTCTTT < SRR4302543.4448869/94‑1 (MQ=60)
CTCACGCGCGGTATCTTTTGCCCCTTCTTCATCTGAGTGCCAGGCAATACCAATATCAAACCCCTGCTGCGCCAGTAATAACGCGCACTCTTTG < SRR4302543.4292345/94‑1 (MQ=60)
CTCACGCGCGGTATCTTTTGCCCCTTCTTCATCTGAGTGCCAGGCAATACCAATATCAAACCCCTGCTGCGCCAGTAATAACGCGCACTCTTTG < SRR4302543.6258641/94‑1 (MQ=60)
CTCACGCGCGGTATCTTTTGCCCCTTCTTCATCTGAGTGCCAGGCAATACCAATATCAAACCCCTGCTGCGCCAGTAATAACGCGCACTCTTTG > SRR4302543.1632135/1‑94 (MQ=60)
TCACGCGCGGTATCTTTTGCCCCTTCTTCATCTGAGTGCCAGGCAATACCAATATCAAACCCCTGCTGCGCCAGTAATAACGCGCACTCTTTGC > SRR4302543.3553579/1‑94 (MQ=60)
TCACGCGCGGTATCTTTTGCCCCTTCTTCATCTGAGTGCCAGGCAATACCAATATCAAACCCCTGCTGCGCCAGTAATAACGCGCACTCTTTGC < SRR4302543.457633/94‑1 (MQ=60)
ACGCGCGGTATCTTTTGCCCCTTCTTCATCTGAGTGCCAGGCAATACCAATATCAAACCCCTGCTGCGCCAGTAATAACGCGCACTCTTTGCCG > SRR4302543.5628775/1‑94 (MQ=60)
CGCGCGGTATCTTTTGCCCCTTCTTCATCTGAGTGCCAGGCAATACCAATATCAAACCCCTGCTGCGCCAGTAATAACGCGCACTCTTTGCCGA > SRR4302543.3725749/1‑94 (MQ=60)
CGCGCGGTATCTTTTGCCCCTTCTTCATCTGAGTGCCAGGCAATACCAATATCAAACCCCTGCTGCGCCAGTAATAACGCGCACTCTTTGCCGA > SRR4302543.6066848/1‑94 (MQ=60)
CGCGCGGTATCTTTTGCCCCTTCTTCATCTGAGTGCCAGGCAATACCAATATCAAACCCCTGCTGCGCCAGTAATAACGCGCACTCTTTGCCGA > SRR4302543.6418504/1‑94 (MQ=60)
CGCGGTATCTTTTGCCCCTTCTTCATCTGAGTGCCAGGCAATACCAATATCAAACCCCTGCTGCGCCAGTAATAACGCGCACTCTTTGCCGATC > SRR4302543.340504/1‑94 (MQ=60)
CGCGGTATCTTTTGCCCCTTCTTCATCTGAGTGCCAGGCAATACCAATATCAAACCCCTGCTGCGCCAGTAATAACGCGCACTCTTTGCCGATC < SRR4302543.1992147/94‑1 (MQ=60)
CGGTATCTTTTGCCCCTTCTTCATCTGAGTGCCAGGCAATACCAATATCAAACCCCTGCTGCGCCAGTAATAACGCGCACTCTTTGCCGATCCC > SRR4302543.4104470/1‑94 (MQ=60)
GGTATCTTTTGCCCCTTCTTCATCTGAGTGCCAGGCAATACCAATATCAAACCCCTGCTGCGCCAGTAATAACGCGCACTCTTTGCCGATCCCC < SRR4302543.884419/94‑1 (MQ=60)
GGTATCTTTTGCCCCTTCTTCATCTGAGTGCCAGGCAATACCAATATCAAACCCCTGCTGCGCCAGTAATAACGCGCACTCTTTGCCGATCCCC < SRR4302543.3095493/94‑1 (MQ=60)
TATCTTTTGCCCCTTCTTCATCTGAGTGCCAGGCAATACCAATATCAAACCCCTGCTGCGCCAGTAATAACGCGCACTCTTTGCCGATCCCCGA > SRR4302543.4956598/1‑94 (MQ=60)
ATCTTTTGCCCCTTCTTCATCTGAGTGCCAGGCAATACCAATATCAAACCCCTGCTGCGCCAGTAATAACGCGCACTCTTTGCCGATCCCCGAA > SRR4302543.5052811/1‑94 (MQ=60)
CTTTTGCCCCTTCTTCATCTGAGTGCCAGGCAATACCAATATCAAACCCCTGCTGCGCCAGTAATAACGCGCACTCTTTGCCGATCCCCGAATC > SRR4302543.7667948/1‑94 (MQ=60)
CTTTTGCCCCTTCTTCATCTGAGTGCCAGGCAATACCAATATCAAACCCCTGCTGCGCCAGTAATAACGCGCACTCTTTGCCGATCCCCGAATC < SRR4302543.3632035/94‑1 (MQ=60)
TTGCCCCTTCTTCATCTGAGTGCCAGGCAATACCAATATCAAACCCCTGCTGCGCCAGTAATAACGCGCAGTCTTTGCCGctcccacaatcgaa > SRR4302543.330776/1‑80 (MQ=60)
TGCCCCTTCTTCATCTGAGTGCCAGGCAATACCAATATCAAACCCCTGCTGCGCCAGTAATAACGCGCACTCTTTGCCGATCCCCGAATCGGAG < SRR4302543.5084902/94‑1 (MQ=60)
GCCCCTTCTTCATCTGAGTGCCAGGCAATACCAATATCAAACCCCTGCTGCGCCAGTAATAACGCGCACTCTTTGCCGATCCCCGAATCGGAGG < SRR4302543.4103273/94‑1 (MQ=60)
GCCCCTTCTTCATCTGAGTGCCAGGCAATACCAATATCAAACCCCTGCTGCGCCAGTAATAACGCGCACTCTTTGCCGATCCCCGAATCGGAGG < SRR4302543.6690071/94‑1 (MQ=60)
CCCCTTCTTCATCTGAGTGCCAGGCAATACCAATATCAAACCCCTGCTGCGCCAGTAATAACGCGCACTCTTTGCCGATCCCCGAATCGGAGGC > SRR4302543.5339460/1‑94 (MQ=60)
CCCTTCTTCATCTGAGTGCCAGGCAATACCAATATCAAACCCCTGCTGCGCCAGTAATAACGCGCCCTCTTTGCCGATCCCCGAATCGGAGGCG < SRR4302543.3115536/94‑1 (MQ=60)
CCCTTCTTCATCTGAGTGCCAGGCAATACCAATATCAAACCCCTGCTGCGCCAGTAATAACGCGCACTCTTTGCCGATCCCCGAATCGGAGGCG > SRR4302543.7041941/1‑94 (MQ=60)
CCCTTCTTCATCTGAGTGCCAGGCAATACCAATATCAAACCCCTGCTGCGCCAGTAATAACGCGCACTCTTTGCCGATCCCCGAATCGGAGGCG > SRR4302543.272297/1‑94 (MQ=60)
CCTTCTTCATCTGAGTGCCAGGCAATACCAATATCAAACCCCTGCTGCGCCAGTAATAACGCGCACTCTTTGCCGATCCCCGAATCGGAGGCGG > SRR4302543.4753866/1‑94 (MQ=60)
CCTTCTTCATCTGAGTGCCAGGCAATACCAATATCAAACCCCTGCTGCGCCAGTAATAACGCGCACTCTTTGCCGATCCCCGAATCGGAGGCGG > SRR4302543.6938757/1‑94 (MQ=60)
CTTCTTCATCTGAGTGCCAGGCAATACCAATATCAAACCCCTGCTGCGCCAGTAATAACGCGCACTCTTTGCCGATCCCCGAATCGGAGGCGGT < SRR4302543.3617263/94‑1 (MQ=60)
TTCTTCATCTGAGTGCCAGGCAATACCAATATCAAACCCCTGCTGCGCCAGTAATAACGCGCACTCTTTGCCGATCCCCGAATCGGAGGCGGTA < SRR4302543.864542/94‑1 (MQ=60)
TTCTTCATCTGAGTGCCAGGCAATACCAATATCAAACCCCTGCTGCGCCAGTAATAACGCGCACTCTTTGCCGATCCCCGAATCGGAGGCGGTA < SRR4302543.5945080/94‑1 (MQ=60)
TCTTCATCTGAGTGCCAGGCAATACCAATATCAAACCCCTGCTGCGCCAGTAATAACGCGCACTCTTTGCCGATCCCCGAATCGGAGGCGGTAA > SRR4302543.4613944/1‑94 (MQ=60)
CTTCATCTGAGTGCCAGGCAATACCAATATCAAACCCCTGCTGCGCCAGTAATAACGCGCACTCTTTGCCGATCCCCGAATCGGAGGCGGTAAT > SRR4302543.2318621/1‑94 (MQ=60)
CTTCATCTGAGTGCCAGGCAATACCAATATCAAACCCCTGCTGCGCCAGTAATAACGCGCACTCTTTGCCGATCCCCGAATCGGAGGCGGTAAA > SRR4302543.4482368/1‑94 (MQ=60)
TTCATCTGAGTGCCAGGCAATACCAATATCAAACCCCTGCTGCGCCAGTAATAACGCGCACTCTTTGCCGATCCCCGAATCGGAGGCGGTAATA < SRR4302543.2323445/94‑1 (MQ=60)
TTCATCTGAGTGCCAGGCAATACCAATATCAAACCCCTGCTGCGCCAGTAATAACGCGCACTCTTTGCCGATCCCCGAATCGGAGGCGGTAATA > SRR4302543.6112059/1‑94 (MQ=60)
TCATCTGAGTGCCAGGCAATACCAATATCAAACCCCTGCTGCGCCAGTAATAACGCGCACTCTTTGCCGATCCCCGAATCGGAGGCGGTAATAA > SRR4302543.38887/1‑94 (MQ=60)
CATCTGAGTGCCAGGCAATACCAATATCAAACCCCTGCTGCGCCAGTAATAACGCGCACTCTTTGCCGATCCCCGAATCGGAGGCGGTAATAAT < SRR4302543.7080572/94‑1 (MQ=60)
ATCTGAGTGCCAGGCAATACCAATATCAAACCCCTGCTGCGCCAGTAATAACGCGCACTCTTTGCCGATCCCCGAATCGGAGGCGGTAATAATC > SRR4302543.3084834/1‑94 (MQ=60)
ATCTGAGTGCCAGGCAATACCAATATCAAACCCCTGCTGCGCCAGTAATAACGCGCACTCTTTGCCGATCCCCGAATCGGAGGCGGTAATAATC > SRR4302543.3784273/1‑94 (MQ=60)
TCTGAGTGCCAGGCAATACCAATATCAAACCCCTGCTGCGCCAGTAATAACGCGCACTCTTTGCCGATCCCCGAATCGGAGGCGGTAATAATCG < SRR4302543.1730815/94‑1 (MQ=60)
TCTGAGTGCCAGGCAATACCAATATCAAACCCCTGCTGCGCCAGTAATAACGCGCACTCTTTGCCGATCCCCGAATCGGAGGCGGTAATAATCG < SRR4302543.3317616/94‑1 (MQ=60)
GAGTGCCAGGCAATACCAATATCAAACCCCTGCTGCGCCAGTAATAACGCGCACTCTTTGCCGATCCCCGAATCGGAGGCGGTAATAATCGCAA < SRR4302543.1660153/94‑1 (MQ=60)
TGCCAGGCAATACCAATATCAAACCCCTGCTGCGCCAGTAATAACGCGCACTCTTTGCCGATCCCCGAATCGGAGGCGGTAATAATCGCAACCT < SRR4302543.2088497/94‑1 (MQ=60)
TGCCAGGCAATACCAATATCAAACCCCTGCTGCGCCAGTAATAACGCGCACTCTTTGCCGATCCCCGAATCGGAGGCGGTAATAATCGCAACCT < SRR4302543.4155896/94‑1 (MQ=60)
CCAGGCAATACCAATATCAAACCCCTGCTGCGCCAGTAATAACGCGCACTCTTTGCCGATCCCCGAATCGGAGGCGGTAATAATCGCAACCTGT < SRR4302543.1955070/94‑1 (MQ=60)
CCAGGCAATACCAATATCAAACCCCTGCTGCGCCAGTAATAACGCGCACTCTTTGCCGATCCCCGAATCGGAGGCGGTAATAATCGCAACCTGT > SRR4302543.1869865/1‑94 (MQ=60)
CCAGGCAATACCAATATCAAACCCCTGCTGCGCCAGTAATAACGCGCACTCTTTGCCGATCCCCGAATCGGAGGCGGTAATAATCGCAACCTGT < SRR4302543.186506/94‑1 (MQ=60)
CCAGGCAATACCAATATCAAACCCCTGCTGCGCCAGAAATAACGCGCACTCTTTGCCGATCCCCGAATCGGAGGCGGTAATAATAGCAACCTGT > SRR4302543.7216114/1‑94 (MQ=60)
CAGGCAATACCAATATCAAACCCCTGCTGCGCCAGTAATAACGCGCACTCTTTGCCGATCCCCGAATCGGAGGCGGTAATAATCGCAACCTGTG < SRR4302543.7862954/94‑1 (MQ=60)
CAGGCAATACCAATATCAAACCCCTGCTGCGCCAGTAATAACGCGCACTCTTTGCCGATCCCCGAATCGGAGGCGGTAATAATCGCAACCTGTG < SRR4302543.1415154/94‑1 (MQ=60)
CAGGCAATACCAATATCAAACCCCTGCTGCGCCAGTAATAACGCGCACTCTTTGCCGATCCCCGAATCGGAGGCGGTAATAATCGCAACCTGTG > SRR4302543.1169372/1‑94 (MQ=60)
CAGGCAATACCAATATCAAACCCCTGCTGCGCCAGTAATAACGCGCACTCTTTGCCGATCCCCGAATCGGAGGCGGTAATAATCGCAACCTGTC > SRR4302543.3973572/1‑94 (MQ=60)
GGCAATACCAATATCAAACCCCTGCTGCGCCAGTAATAACGCGCACTCTTTGCCGATCCCCGAATCGGAGGCGGTAATAATCGCAACCTGTGCC > SRR4302543.3414967/1‑94 (MQ=60)
GGCAATACCAATATCAAACCCCTGCTGCGCCAGTAATAACGCGCACTCTTTGCCGATCCCCGAATCGGAGGCGGTAATAATCGCAACCTGTGCC < SRR4302543.5494869/94‑1 (MQ=60)
GCAATACCAATATCAAACCCCTGCTGCGCCAGTAATAACGCGCACTCTTTGCCGATCCCCGAATCGGAGGCGGTAATAATCGCAACCTGTGCCA > SRR4302543.5149503/1‑94 (MQ=60)
CAATACCAATATCAAACCCCTGCTGCGCCAGTAATAACGCGCACTCTTTGCCGATCCCCGAATCGGAGGCGGTAATAATCGCAACCTGTGCCAT > SRR4302543.4847882/1‑94 (MQ=60)
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TGCCGAGATCCAGCTGCACGATCTCCGCACGTACGCCGTGGCTAACTACCTCACGCGCGGTATCTTTTGCCCCTTCTTCATCTGAGTGCCAGGTAATACCAATATCAAACCCCTGCTGCGCCAGTAATAACGCGCACTCTTTGCCGATCCCCGAATCGGAGGCGGTAATAATCGCAACCTGTGCCAT > NC_000913/2225104‑2225290
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| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 2 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
