Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I1 R1
|
1696 |
279.3 |
15874187 |
97.8% |
15524954 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
2,247,350 |
T→C |
S97G (AGT→GGT) |
yeiE ← |
putative transcriptional regulator LYSR‑type |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 2,247,350 | 0 | T | C | 98.5%
| 641.6
/ ‑2.7
| 205 | S97G (AGT→GGT) | yeiE | putative transcriptional regulator LYSR‑type |
| Reads supporting (aligned to +/- strand): ref base T (2/1); new base C (92/110); total (94/111) |
| Fisher's exact test for biased strand distribution p-value = 5.94e-01 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.99e-01 |
Only 100 of 220 total aligned reads displayed.
TATTCCCAACGCTAAGTTCAATCGGCAACTGCGGATAATCATGGCGATAACGGGCGATAACTGCAGGCAGAATGTAGTTACCGATGGTACTACTGGCATAGATACGAATCGCGCCGTTGTCTTCGCGAAACAGTTGTTCGATTTCAACCGCCTGTTCAAGCAATGCCAACGCACGCGGAT > NC_000913/2247260‑2247439
|
tATTCCCAACGCTAAGTTCAATCGGCAACTGCGGATAATCATGGCGATAACGGGCGATAACTGCAGGCAGAATGTAGTTACCGATGGtaccac < 1:5411088/93‑1 (MQ=255)
tATTCCCAACGCTAAGTTCAATCGGCAACTGCGGATAATCATGGCGATAACGGGCGATAACTGCAGGCAGAATGTAGTTACCGATGGtaccac > 2:5432893/1‑93 (MQ=255)
aTTCCCAACGCTAAGTTCAATCGGCAACTGCGGATAATCATGGCGATAACGGGCGATAACTGCAGGCAGAATGTAGTTACCGATGGTaccact > 2:5781067/1‑93 (MQ=255)
ttCCCAACGCTAAGTTCAATCGGCAACTGCGGATAATCATGGCGATAACGGGCGATAACTGCAGGCAGAATGTAGTTACCGATGGTACCACTg < 1:6457552/93‑1 (MQ=255)
ttCCCAACGCTAAGTTCAATCGGCAACTGCGGATAATCATGGCGATAACGGGCGATAACTGCAGGCAGAATGTAGTTACCGATGGTACCACTg < 1:2904809/93‑1 (MQ=255)
ttCCCAACGCTAAGTTCAATCGGCAACTGCGGATAATCATGGCGATAACGGGCGATAACTGCAGGCAGAATGTAGTTACCGATGGTACCACTg < 2:3270635/93‑1 (MQ=255)
cccAACGCTAAGTTCAATCGGCAACTGCGGATAATCATGGCGATAACGGGCGATAACTGCAGGCAGAATGTAGTTACCGATGGTACCACTGGc < 1:7873081/93‑1 (MQ=255)
ccAACGCTAAGTTCAATCGGCAACTGCGGATAATCATGGCGATAACGGGCGATAACTGCAGGCAGAATGTAGTTACCGATGGTACCACTGGCa > 1:6706437/1‑93 (MQ=255)
ccAACGCTAAGTTCAATCGGCAACTGCGGATAATCATGGCGATAACGGGCGATAACTGCAGGCAGAATGTAGTTACCGATGGTACCACTGGCa < 2:4079789/93‑1 (MQ=255)
cAACGCTAAGTTCAATCGGCAACTGCGGATAATCATGGCGATAACGGGCGATAACTGCAGGCAGAATGTAGTTACCGATGGTACCACTGGCAt < 2:5953320/93‑1 (MQ=255)
cAACGCTAAGTTCAATCGGCAACTGCGGATAATCATGGCGATAACGGGCGATAACTGCAGGCAGAATGTAGTTACCGATGGTACCACTGGCAt < 2:3420036/93‑1 (MQ=255)
gCTAAGTTCAATCGGCAACTGCGGATAATCATGGCGATAACGGGCGATAACTGCAGGCAGAATGTAGTTACCGATGGTACCACTGGCATAGAt > 1:7684648/1‑93 (MQ=255)
aGTTCAATGGGCAACTGCGGATAATCATGGCGATAACGGGCGATAACTGCAGGCAGAATGTAGGTACCGATGGTACCACTGGCATAGATACGa > 2:5947002/1‑93 (MQ=255)
aGTTCAATCGGCAACTGCGGATAATCATGGCGATAACGGGCGATAACTGCAGGCAGAATGTAGTTACCGATGGTACCACTGGCATAGATACGa < 1:4835952/93‑1 (MQ=255)
aGTTCAATCGGCAACTGCGGATAATCATGGCGATAACGGGCGATAACTGCAGGCAGAATGTAGTTACCGATGGTACCACTGGCATAGATACGa < 2:2711567/93‑1 (MQ=255)
gTTCAATCGGCAACTGCGGATAATCATGGCGATAACGGGCGATAACTGCAGGCAGAATGTAGTTACCGATGGTACCACTGGCATAGATACGaa < 2:1111954/93‑1 (MQ=255)
gTTCAATCGGCAACTGCGGATAATCATGGCGATAACGGGCGATAACTGCAGGCAGAATGTAGTTACCGATGGTACCACTGGCATAGATACGaa > 2:5171455/1‑93 (MQ=255)
gTTCAATCGGCAACTGCGGATAATCATGGCGATAACGGGCGATAACTGCAGGCAGAATGTAGTTACCGATGGTACCACTGGCATAGATACGaa < 2:564884/93‑1 (MQ=255)
ttCAATCGGCAACTGCGGATAATCATGGCGATAACGGGCGATAACTGCAGGCAGAATGTAGTTACCGATGGTACCACTGGCATAGATACGAAt < 1:6700894/93‑1 (MQ=255)
ttCAATCGGCAACTGCGGATAATCATGGCGATAACGGGCGATAACTGCAGGCAGAATGTAGTTACCGATGGTACCACTGGCATAGATACGAAt > 1:4876360/1‑93 (MQ=255)
tCAATCGGCAACTGCGGATAATCATGGCGATAACGGGCGATAACTGCAGGCAGAATGTAGTTACCGATGGTACCACTGGCATAGATACGAATc < 2:4356096/93‑1 (MQ=255)
tCAATCGGCAACTGCGGATAATCATGGCGATAACGGGCGATAACTGCAGGCAGAATGTAGTTACCGATGGTACCACTGGCATAGATACGAATc < 2:1877755/93‑1 (MQ=255)
tCAATCGGCAACTGCGGATAATCATGGCGATAACGGGCGATAACTGCAGGCAGAATGTAGTTACCGATGGTACCACTGGCATAGATACGAATc > 1:3369258/1‑93 (MQ=255)
tCGGCAACTGCGGATAATCATGGCGATAACGGGCGATAACTGCAGGCAGAATGTAGTTACCGATGGTACCACTGGCATAGATACGAATCgcgc > 1:7704588/1‑93 (MQ=255)
tCGGCAACTGCGGATAATCATGGCGATAACGGGCGATAACTGCAGGCAGAATGTAGTTACCGATGGTACCACTGGCATAGATACGAATCgcgc < 2:3013824/93‑1 (MQ=255)
gCAACTGCGGATAATCATGGCGATAACGGGCGATAACTGCAGGCAGAATGTAGTTACCGATGGTACCACTGGCATAGATACGAATCGCGCCGt < 1:6246625/93‑1 (MQ=255)
gCAACTGCGGATAATCATGGCGATAACGGGCGATAACTGCAGGCAGAATGTAGTTACCGATGGTACCACTGGCATAGATACGAATCGCGCCGt < 2:4446150/93‑1 (MQ=255)
aaCTGCGGATAATCATGGCGATAACGGGCGATAACTGCAGGCAGAATGTAGTTACCGATGGTACCACTGGCATAGATACGAATCGCGCCGTTg < 2:3695452/93‑1 (MQ=255)
aaCTGCGGATAATCATGGCGATAACGGGCGATAACTGCAGGCAGAATGTAGTTACCGATGGTACCACTGGCATAGATACGAATCGCGCCGTTg > 2:819997/1‑93 (MQ=255)
aCTGCGGATAATCATGGCGATAACGGGCGATAACTGCAGGCAGAATGTAGTTACCGATGGTACCACTGGCATAGATACGAATCGCGCCGTTGt > 2:6890783/1‑93 (MQ=255)
cTGCGGATAATCATGGCGATAACGGGCGATAACTGCAGGCAGAATGTAGTTACCGATGGTACCACTGGCATAGATACGAATCGCGCCGTTGTc < 2:632110/93‑1 (MQ=255)
cGGATAATCATGGCGATAACGGGCGATAACTGCAGGCAGAATGTAGTTACCGATGGTACCACTGGCATAGATACGAATCGCGCCGTTGTCTTc < 1:5214474/93‑1 (MQ=255)
ggATAATCATGGCGATAACGGGCGATAACTGCAGGCAGAATGTAGTTACCGATGGTACCACTGGCATAGATACGAATCGCGCCGTTGTCTTcg > 1:2317301/1‑93 (MQ=255)
gATAATCATGGCGATAACGGGCGATAACTGCAGGCAGAATGTAGTTACCGATGGTACCACTGGCATAGATACGAATCGCGCCGTTGTCTTcgc < 1:7489449/93‑1 (MQ=255)
gATAATCATGGCGATAACGGGCGATAACTGCAGGCAGAATGTAGTTACCGATGGTACCACTGGCATAGATACGAATCGCGCCGTTGTCTTcgc < 2:4876037/93‑1 (MQ=255)
gATAATCATGGCGATAACGGGCGATAACTGCAGGCAGAATGTAGTTACCGATGGTACCACTGGCATAGATACGAATCGCGCCGTTGTCTTcgc > 1:6400133/1‑93 (MQ=255)
aTAATCATGGCGATAACGGGCGATAACTGCAGGCAGAATGTAGTTACCGATGGTACCACTGGCATAGATACGAATCGCCCCGTTGTCTTcgcg > 1:1673949/1‑93 (MQ=255)
tAATCATGGCGATAACGGGCGATAACTGCAGGCAGAATGTAGTTACCGATGGTACCACTGGCATAGATACGAATCGCGCCGTTGTCTTCGCGa > 1:7088698/1‑93 (MQ=255)
tAATCATGGCGATAACGGGCGATAACTGCAGGCAGAATGTAGTTACCGATGGTACCACTGGCATAGATACGAATCGCGCCGTTGTCTTCGCGa < 2:1527298/93‑1 (MQ=255)
aTCATGGCGATAACGGGCGATAACTGCAGGCAGAATGTAGTTACCGATGGTACCACTGGCATAGATACGAATCGCGCCGTTGTCTTCGCGaaa > 2:4587637/1‑93 (MQ=255)
cATGGCGATAACGGGCGATAACTGCAGGCAGAATGTAGTTACCGATGGTACCACTGGCATAGATACGAATCGCGCCGTTGTCTTCGCGAAACa < 2:2302625/93‑1 (MQ=255)
cATGGCGATAACGGGCGATAACTGCAGGCAGAATGTAGTTACCGATGGTACCACTGGCATAGATACGAATCGCGCCGTTGTCTTCGCGAAACa < 1:4295550/93‑1 (MQ=255)
aaTGGAGAAAACGGGCCACAACCGCAGGCAGAATGTAGTTACCGATGGTCCCACTGGCCTAGATACGAATCGCGCCGTTGTCTTCGCGAAACa < 2:5577055/92‑1 (MQ=255)
aTGGCGATAACGGGCGATAACTGCAGGCAGAATGTAGTTACCGATGGTACCACTGGCATAGATACGAATCGCGCCGTTGTCTTCGCGAAAAAg > 2:5000164/1‑93 (MQ=255)
aTGGCGATAACGGGCGATAACTGCAGGCAGAATGTAGTTACCGATGGCACCACTGGCATAGATACGAATCGCGCCGTTGTCTTCGCGAAATAg > 1:4188955/1‑93 (MQ=255)
tGGCGATAACGGGCGATAACTGCAGGCAGAATGTAGTTACCGATGGTACCACTGGCATAGATACGAATCGCGCCGTTGTCTTCGCGAAACAgt < 1:3950909/93‑1 (MQ=255)
tGGCGATAACGGGCGATAACTGCAGGCAGAATGTAGTTACCGATGGTACCACTGGCATAGATACGAATCGCGCCGTTGTCTTCGCGAAACAgt < 1:4547818/93‑1 (MQ=255)
ggCGATAACGGGCGATAACTGCAGGCAGAATGTAGTTACCGATGGTACCACTGGCATAGATACGAATCGCGCCGTTGTCTTCGCGAAACAgtt < 1:6331848/93‑1 (MQ=255)
ggCGATAACGGGCGATAACTGCAGGCAGAATGTAGTTACCGATGGTACCACTGGCATAGATACGAATCGCGCCGTTGTCTTCGCGAAACAgtt < 2:5841200/93‑1 (MQ=255)
gCGATAACGGGCGATAACTGCAGGCAGAATGTAGTTACCGATGGTACCACTGGCATAGATACGAATCGCGCCGTTGTCTTCGCGAAACAgttg < 2:785964/93‑1 (MQ=255)
gCGATAACGGGCGATAACTGCAGGCAGAATGTAGTTACCGATGGTACCACTGGCATAGATACGAATCGCGCCGTTGTCTTCGCGAAACAgttg < 1:5766033/93‑1 (MQ=255)
gCGATAACGGGCGATAACTGCAGGCAGAATGTAGTTACCGATGGTACCACTGGCATAGATACGAATCGCGCAGTTGTCTTCGCGAAACAgttg > 1:2467519/1‑93 (MQ=255)
gctAACGGGCGATAACTGCAGGCAGAATGTAGTTACCGATGGTACCACTGGCATAGATACGAATCGCGCCGTTGTCTTCGCGGAACAgttgtt > 1:121369/3‑93 (MQ=255)
gATAACGGGCGATAACTGCAGGCAGAATGTAGTTACCGATGGTACCACTGGCATAGATACGAATCGCGCCGTTGTCTTCGCGAAACAgttgtt < 2:5065383/93‑1 (MQ=255)
gATAACGGGCGATAACTGCAGGCAGAATGTAGTTACCGATGGTACCACTGGCATAGATACGAATCGCGCCGTTGTCTTCGCGAAACAgttgtt > 2:4813703/1‑93 (MQ=255)
aTAACGGGCGATAGCTGCAGGCATAATGTAGTTACGGATGGTACCACTGGCATAGATACGAATCGCGCCGTTGTCTTCGCGAAACAGTTGTTc < 2:5354468/93‑1 (MQ=255)
aTAACGGGCGATAACTGCAGGCAGAATGTAGTTACCGATGGTACCACTGGCATAGATACGAATCGCGCCGTTGTCTTCGCGAAACAGTTGTTc < 1:590504/93‑1 (MQ=255)
aTAACGGGCGATAACTGCAGGCAGAATGTAGTTACCGATGGTACCACTGGCATAGATACGAATCGCGCCGTTGTCTTCGCGAAACAGTTGTTc < 1:7237947/93‑1 (MQ=255)
aTAACGGGCGATAACTGCAGGCAGAATGTAGTTACCGATGGTACCACTGGCATAGATACGAATCGCGCCGTTGTCTTCGCGAAACAGTTGTTc < 1:5094299/93‑1 (MQ=255)
tAACGGGCGATAACTGCAGGCAGAATGTAGTTACCGATGGTACCACTGGCATAGATACGAATCGCGCCGTTGTCTTCGCGAAACAGTTGTTCg > 1:1792940/1‑93 (MQ=255)
gggCGATAACTGCAGGCAGAATGTAGTTACCGATGGTACCACTGGCATAGATACGAATCGCGCCGTTGTCTTCGCGAAACAGTTGTTCGAttt > 1:7131519/1‑93 (MQ=255)
gggCGATAACTGCAGGCAGAATGTAGTTACCGATGGTACCACTGGCATAGATACGAATCGCGCCGTTGTCTTCGCGAAACAGTTGTTCGAttt > 2:6925864/1‑93 (MQ=255)
ggCGATAACTGCAGGCAGAATGTAGTTACCGATGGTACCACTGGCATAGATACGAATCGCGCCGTTGTCTTCGCGAAACAGTTGTTCGATTTc > 1:5466611/1‑93 (MQ=255)
ggCGATAACTGCAGGCAGAATGTAGTTACCGATGGTACCACTGGCATAGATACGAATCGCGCCGTTGTCTTCGCGAAACAGTTGCTCGATTTc > 2:1399721/1‑93 (MQ=255)
cGATAACTGCAGGCAGAATGTAGTTACCGATGGTACCACTGGCATAGATACGAATCGCGCCGTTGTCTTCGCGAAACAGTTGTTCGATTTCaa > 2:7168629/1‑93 (MQ=255)
cGATAACTGCAGGCAGAATGTAGTTACCGATGGTACCACTGGCATAGATACGAATCGCGCCGTTGTCTTCGCGAAACAGTTGTTCGATTTCaa < 2:4639930/93‑1 (MQ=255)
aTAACTGCAGGCAGAATGTAGTTACCGATGGTACCACTGGCATAGATACGAATCGCGCCGTTGTCTTCGCGAAACAGTTGTTCGATTTCAAcc < 2:1418048/93‑1 (MQ=255)
tAACTGCAGGCAGAATGTAGTTACCGATGGTACCACTGGCATAGATACGAATCGCGCCGTTGTCTTCGCGAAACAGTTGTTCGATTTCAACCg > 1:681731/1‑93 (MQ=255)
aaCTGCAGGCAGAATGTAGTTACCGATGGTACCACTGGCATAGATACGAATCGCGCCGTTGTCTTCGCGAAACAGTTGTTCGATTTCAACCGc > 1:3836457/1‑93 (MQ=255)
aCTGCAGGCAGAATGTAGTTACCGATGGTACCACTGGCATAGATACGAATCGCGCCGTTGTCTTCGCGAAACAGTTGTTCTATTTCCACCGcc > 2:6143487/1‑93 (MQ=255)
cTGCAGGCAGAATGTAGTTACCGATGGTACCACTGGCATAGATACGAATCGCGCCGTTGTCTTCGCGAAACAGTTGTTCGATTTCAACCGCCt > 2:6986037/1‑93 (MQ=255)
gcaggcagAATGTAGTTACCGATGGTACCACTGGCATAGATACGAATCGCGCCGTTGTCTTCGCGAAACAGTTGTTCGATTTCAACCGCCTGt > 2:757473/1‑93 (MQ=255)
caggcagAATGTAGTTACCGATGGTACCACTGGCATAGATACGAATCGCGCCGTTGTCTTCGCGAAACAGTTGTTCGATTTCAACCGCCTGtt < 2:3642713/93‑1 (MQ=255)
aggcagAATGTAGTTACCGATGGTACCACTGGCATAGATACGAATCGCGCCGTTGTCTTCGCGAAACAGTTGTTCGATTTCAACCGCCTGTTc > 2:5327186/1‑93 (MQ=255)
aggcagAATGTAGTTACCGATGGTACCACTGGCATAGATACGAATCGCGCCGTTGTCTTCGCGAAACAGTTGTTCGATTTCAACCGCCTGTTc < 1:2116560/93‑1 (MQ=255)
ggcagAATGTAGTTACCGATGGTACCACTGGCATAGATACGAATCGCGCCGTTGTCTTCGCGAAACAGTTGTTCGATTTCAACCGCCTGTTCa > 2:2429891/1‑93 (MQ=255)
agAATGTAGTTACCGATGGTACCACTGGCATAGATACGAATCGCGCCGTTGTCTTCGCGAAACAGTTGTTCGATTTCAACCGCCTGTTCAAGc > 1:1549589/1‑93 (MQ=255)
gAATGTAGTTACCGATGGTACCACTGGCATAGATACGAATCGCGCCGTTGTCTTCGCGAAACAGTTGTTCGATTTCAACCGCCTGTTCAAGCa > 1:4476165/1‑93 (MQ=255)
aaTGTAGTTACCGATGGTACCACTGGCATAGATACGAATCGCGCCGTTGTCTTCGCGAAACAGTTGTTCGATTTCAACCGCCTGTTCAAGCaa > 1:4960849/1‑93 (MQ=255)
aaTGTAGTTACCGATGGTACCACTGGCATAGATACGAATCGCGCCGTTGTCTTCGCGAAACAGTTGTTCGATTTCAACCGCCTGTTCAAGCaa > 2:1302216/1‑93 (MQ=255)
aaTGTAGTTACCGATGGTACCACTGGCATAGATACGAATCGCGCCGTTGTCTTCGCGAAACAGTTGCTCGATTTCAACCGCCTGTTCAAGCaa < 1:536583/93‑1 (MQ=255)
aTGTAGTTACCGATGGTACCACTGGCATAGATACGAATCGCGCCGTTGTCTTCGCGAAACAGTTGTTCGATTTCAACCGCCTGTTCAAGCAAt < 2:3892184/93‑1 (MQ=255)
aTGTAGTTACCGATGGTACCACTGGCATAGATACGAATCGCGCCGTTGTCTTCGCGAAACAGTTGTTCGATTTCAACCGCCTGTTCAAGCAAt < 1:7200950/93‑1 (MQ=255)
aTGTAGTTACCGATGGTACCACTGGCATAGATACGAATCGCGCCGTTGTCTTCGCGAAACAGTTGTTCGATTTCAACCGCCTGTTCAAGCAAt > 1:7439796/1‑93 (MQ=255)
gTAGTTACCGATGGTACCACTGGCATAGATACGAATCGCGCCGTTGTCTTCGCGAAACAGTTGTTCGATTTCAACCGCCTGTTCAAGCAATGc < 2:3978914/93‑1 (MQ=255)
gTAGTTACCGATGGTACCACTGGCATAGATACGAATCGCGCCGTTGTCTTCGCGAAACAGTTGTTCGATTTCAACCGCCTGTTCAAGCAATGc > 1:3932207/1‑93 (MQ=255)
aGTTACCGATGGTACCACTGGCATAGATACGAATCGCGCCGTTGTCTTCGCGAAACAGTTGTTCGATTTCAACCGCCTGTTCAAGCAATGCCa < 1:4696529/93‑1 (MQ=255)
ttACCGATGGTACCACTGGCATAGATACGAATCGCGCCGTTGTCTTCGCGAAACAGTTGTTCGATTTCAACCGCCTGTTCAAGCAATGCCAac < 1:5975396/93‑1 (MQ=255)
ttACCGATGGTACCACTGGCATAGATACGAATCGCGCCGTTGTCTTCGCGAAACAGTTGTTCGATTTCAACCGCCTGTTCAAGCAATGCCAac < 2:1754751/93‑1 (MQ=255)
tACCGATGGTACCACTGGCATAGATACGAATCGCGCCGTTGTCTTCGCGAAACAGTTGTTCGATTTCAACCGCCTGTTCAAGCAATGCCAacg > 1:4064707/1‑93 (MQ=255)
tACCGATGGTACCACTGGCATAGATACGAATCGCGCCGTTGTCTTCGCGAAACAGTTGTTCGATTTCAACCGCCTGTTCAAGCAATGCCAacg > 1:171942/1‑93 (MQ=255)
aCCGATGGTACCACTGGCATAGATACGAATCGCGCCGTTGTCTTCGCGAAACAGTTGTTCGATTTCAACCGCCTGTTCAAGCAATGCCAacgc < 2:6699705/93‑1 (MQ=255)
ccGATGGTACCACTGGCATAGATACGAATCGCGCCGTTGTCTTCGCGAAACAGTTGTTCGATTTCAACCGCCTGTTCAAGCAATGCCAacgca < 2:2046739/93‑1 (MQ=255)
ccGATGGTACCACTGGCATAGATACGAATCGCGCCGTTGTCTTCGCGAAACAGTTGTTCGATTTCAACCGCCTGTTCAAGCAATGCCAacgca < 2:7790769/93‑1 (MQ=255)
gATGGTACCACTGGCATAGATACGAATCGCGCCGTTGTCTTCGCGAAACAGTTGTTCGATTTCAACCGCCTGTTCAAGCAATGCCAacgcacg > 2:1477149/1‑93 (MQ=255)
aTGGTACCACTGGCATAGATACGAATCGCGCCGTTGTCTTCGCGAAACAGTTGTTCGATTTCAACCGCCTGTTCAAGCAATGCCAacgcacgc < 1:276333/93‑1 (MQ=255)
tGGTACCACTGGCATAGATACGAATCGCGCCGTTGTCTTCGCGAAACAGTTGTTCGATTTCAACCGCCTGTTCAAGCAATGCCAACGCAcgcg < 1:5075622/93‑1 (MQ=255)
gTACCACTGGCATAGATACGAATCGCGCCGTTGTCTTCGCGAAACAGTTGTTCGATTTCAACCGCCTGTTCAAGCAATGCCAACGCACGCGGa < 2:4207243/93‑1 (MQ=255)
taccacTGGCATAGATACGAATCGCGCCGTTGTCTTCGCGAAACAGTTGTTCGATTTCAACCGCCTGTTCAAGCAATGCCAACGCACGCGGAt > 2:3139469/1‑93 (MQ=255)
taccacTGGCATAGATACGAATCGCGCCGTTGTCTTCGCGAAACAGTTGTTCGATTTCAACCGCCTGTTCAAGCAATGCCAACGCACGCGGAt > 1:3103601/1‑93 (MQ=255)
|
TATTCCCAACGCTAAGTTCAATCGGCAACTGCGGATAATCATGGCGATAACGGGCGATAACTGCAGGCAGAATGTAGTTACCGATGGTACTACTGGCATAGATACGAATCGCGCCGTTGTCTTCGCGAAACAGTTGTTCGATTTCAACCGCCTGTTCAAGCAATGCCAACGCACGCGGAT > NC_000913/2247260‑2247439
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
GGCTATTCCCAACGCTAAGTTCAATCGGCAACTGCGGATAATCATGGCGATAACGGGCGATAACTGCAGGCAGAATGTAGTTACCGATGGTACTACTGGCATAGATACGAATCGCGCCGTTGTCTTCGCGAAACAGTTGTTCGATTTCAACCGCCTGTTCAAGCAATGCCAACGCACGCGGATAGAG > NC_000913/2247257‑2247443
|
GGCTATTCCCAACGCTAAGTTCAATCGGCAACTGCGGATAATCATGGCGATAACGGGCGATAACTGCAGGCAGAATGTAGTTACCGATGGTACC > SRR4302543.2655488/1‑94 (MQ=60)
GCTATTCCCAACGCTAAGTTCAATCGGCAACTGCGGATAATCATGGCGATAACGGGCGATAACTGCAGGCAGAATGTAGTTACCGATGGTACCA > SRR4302543.5156308/1‑94 (MQ=60)
GCTATTCCCAACGCTAAGTTCAATCGGCAACTGCGGATAATCATGGCGATAACGGGCGATAACTGCAGGCAGAATGTAGTTACCGATGGTACCA < SRR4302543.4207711/94‑1 (MQ=60)
CTATTCCCAACGCTAAGTTCAATCGGCAACTGCGGATAATCATGGCGATAACGGGCGATAACTGCAGGCAGAATGTAGTTACCGATGGTACCAC > SRR4302543.3007886/1‑94 (MQ=60)
TATTCCCAACGCTAAGTTCAATCGGCAACTGCGGATAATCATGGCGATAACGGGCGATAACTGCAGGCAGAATGTAGTTACCGATGGTACCACT < SRR4302543.5460301/94‑1 (MQ=60)
ATTCCCAACGCTAAGTTCAATCGGCAACTGCGGATAATCATGGCGATAACGGGCGATAACTGCAGGCAGAATGTAGTTACCGATGGTACCACTG < SRR4302543.2950504/94‑1 (MQ=60)
ATTCCCAACGCTAAGTTCAATCGGCAACTGCGGATAATCATGGCGATAACGGGCGATAACTGCAGGCAGAATGTAGTTACCGATGGTACCACTG > SRR4302543.5683063/1‑94 (MQ=60)
ATTCCCAACGCTAAGTTCAATCGGCAACTGCGGATAATCATGGCGATAACGGGCGATAACTGCAGGCAGAATGTAGTTACCGATGGTACCACTG < SRR4302543.4283960/94‑1 (MQ=60)
TTCCCAACGCTAAGTTCAATCGGCAACTGCGGATAATCATGGCGATAACGGGCGATAACTGCAGGCAGAATGTAGTTACCGATGGTACCACTGG < SRR4302543.2931219/94‑1 (MQ=60)
TTCCCAACGCTAAGTTCAATCGGCAACTGCGGATAATCATGGCGATAACGGGCGATAACTGCAGGCAGAATGTAGTTACCGATGGTACCACTGG < SRR4302543.6518398/94‑1 (MQ=60)
CCCAACGCTAAGTTCAATCGGCAACTGCGGATAATCATGGCGATAACGGGCGATAACTGCAGGCAGAATGTAGTTACCGATGGTACCACTGGCA > SRR4302543.6769749/1‑94 (MQ=60)
CCCAACGCTAAGTTCAATCGGCAACTGCGGATAATCATGGCGATAACGGGCGATAACTGCAGGCAGAATGTAGTTACCGATGGTACCACTGGCA < SRR4302543.7947201/94‑1 (MQ=60)
CCCAACGCTAAGTTCAATCGGCAACTGCGGATAATCATGGCGATAACGGGCGATAACTGCAGGCAGAATGTAGTTACCGATGGTACCACTGGCA < SRR4302543.6491857/94‑1 (MQ=60)
AACGCTAAGTTCAATCGGCAACTGCGGATAATCATGGCGATAACGGGCGATAACTGCAGGCAGAATGTAGTTACCGATGGTACCACTGGCATAG < SRR4302543.7715159/94‑1 (MQ=60)
CGCTAAGTTCAATCGGCAACTGCGGATAATCATGGCGATAACGGGCGATAACTGCAGGCAGAATGTAGTTACCGATGGTACCACTGGCATAGAT > SRR4302543.7757428/1‑94 (MQ=60)
CGCTAAGTTCAATCGGCAACTGCGGATAATCATGGCGATAACGGGCGATAACTGCAGGCAGAATGTAGTTACCGATGGTACCACTGGCATAGAT < SRR4302543.6809534/94‑1 (MQ=60)
CGCTAAGTTCAATCGGCAACTGCGGATAATCATGGCGATAACGGGCGATAACTGCAGGCAGAATGTAGTTACCGATGGTACCACTGGCATAGAT < SRR4302543.496575/94‑1 (MQ=60)
GCTAAGTTCAATCGGCAACTGCGGATAATCATGGCGATAACGGGCGATAACTGCAGGCAGAATGTAGTTACCGATGGTACCACTGGCATAGATA > SRR4302543.5446583/1‑94 (MQ=60)
TAAGTTCAATCGGCAACTGCGGATAATCATGGCGATAACGGGCGATAACTGCAGGCAGAATGTAGTTACCGATGGTACCACTGGCATAGATACG < SRR4302543.5167307/94‑1 (MQ=60)
TAAGTTCAATCGGCAACTGCGGATAATCATGGCGATAACGGGCGATAACTGCAGGCAGAATGTAGTTACCGATGGTACCACTGGCATAGATACG < SRR4302543.4559110/94‑1 (MQ=60)
AAGTTCAATCGGCAACTGCGGATAATCATGGCGATAACGGGCGATAACTGCAGGCAGAATGTAGTTACCGATGGTACCACTGGCATAGATACGA < SRR4302543.1603256/94‑1 (MQ=60)
AGTTCAATCGGCAACTGCGGATAATCATGGCGATAACGGGCGATAACTGCAGGCAGAATGTAGTTACCGATGGTACCACTGGCATAGATACGAA > SRR4302543.7017385/1‑94 (MQ=60)
AGTTCAATCGGCAACTGCGGATAATCATGGCGATAACGGGCGATAACTGCAGGCAGAATGTAGTTACCGATGGTACCACTGGCATAGATACGAA > SRR4302543.7153512/1‑94 (MQ=60)
AGTTCAATCGGCAACTGCGGATAATCATGGCGATAACGGGCGATAACTGCAGGCAGAATGTAGTTACCGATGGTACCACTGGCATAGATACGAA < SRR4302543.4880058/94‑1 (MQ=60)
GTTCAATCGGCAACTGCGGATAATCATGGCGATAACGGGCGATAACTGCAGGCAGAATGTAGTTACCGATGGTACCACTGGCATAGATACGAAT > SRR4302543.4920808/1‑94 (MQ=60)
GTTCAATCGGCAACTGCGGATAATCATGGCGATAACGGGCGATAACTGCAGGCAGAATGTAGTTACCGATGGTACCACTGGCATAGATACGAAT < SRR4302543.6768112/94‑1 (MQ=60)
TTCAATCGGCAACTGCGGATAATCATGGCGATAACGGGCGATAACTGCAGGCAGAATGTAGTTACCGATGGTACCACTGGCATAGATACGAATC < SRR4302543.6764131/94‑1 (MQ=60)
TTCAATCGGCAACTGCGGATAATCATGGCGATAACGGGCGATAACTGCAGGCAGAATGTAGTTACCGATGGTACCACTGGCATAGATACGAATC > SRR4302543.3399523/1‑94 (MQ=60)
TTCAATCGGCAACTGCGGATAATCATGGCGATAACGGGCGATAACTGCAGGCAGAATGTAGTTACCGATGGTACCACTGGCATAGATACGAATC > SRR4302543.6102756/1‑94 (MQ=60)
TCAATCGGCAACTGCGGATAATCATGGCGATAACGGGCGATAACTGCAGGCAGAATGTAGTTACCGATGGTACCACTGGCATAGATACGAATCG < SRR4302543.4143206/94‑1 (MQ=60)
TCAATCGGCAACTGCGGATAATCATGGCGATAACGGGCGATAACTGCAGGCAGAATGTAGTTACCGATGGTACCACTGGCATAGATACGAATCG > SRR4302543.189316/1‑94 (MQ=60)
AATCGGCAACTGCGGATAATCATGGCGATAACGGGCGATAACTGCAGGCAGAATGTAGTTACCGATGGTACCACTGGCATAGATACGAATCGCG < SRR4302543.5897983/94‑1 (MQ=60)
ATCGGCAACTGCGGATAATCATGGCGATAACGGGCGATAACTGCAGGCAGAATGTAGTTACCGATGGTACCACTGGCATAGATACGAATCGCGC > SRR4302543.7777485/1‑94 (MQ=60)
CGGCAACTGCGGATAATCATGGCGATAACGGGCGATAACTGCAGGCAGAATGTAGTTACCGATGGTACCACTGGCATAGATACGAATCGCGCCG < SRR4302543.6433563/94‑1 (MQ=60)
GCAACTGCGGATAATCATGGCGATAACGGGCGATAACTGCAGGCAGAATGTAGTTACCGATGGTACCACTGGCATAGATACGAATCGCGCCGTT < SRR4302543.6305554/94‑1 (MQ=60)
ACTGCGGATAATCATGGCGATAACGGGCGATAACTGCAGGCAGAATGTAGTTACCGATGGTACCACTGGCATAGATACGAATCGCGCCGTTGTC < SRR4302543.6570204/94‑1 (MQ=60)
ACTGCGGATAATCATGGCGATAACGGGCGATAACTGCAGGCAGAATGTAGTTACCGATGGTACCACTGGCATAGATACGAATCGCGCCGTTGTC < SRR4302543.7906136/94‑1 (MQ=60)
CGGATAATCATGGCGATAACGGGCGATAACTGCAGGCAGAATGTAGTTACCGATGGTACCACTGGCATAGATACGAATCGCGCCGTTGTCTTCG < SRR4302543.5261450/94‑1 (MQ=60)
CGGATAATCATGGCGATAACGGGCGATAACTGCAGGCAGAATGTAGTTACCGATGGTACCACTGGCATAGATACGAATCGCGCCGTTGTCTTCG > SRR4302543.2338370/1‑94 (MQ=60)
GGATAATCATGGCGATAACGGGCGATAACTGCAGGCAGAATGTAGTTACCGATGGTACCACTGGCATAGATACGAATCGCGCCGTTGTCTTCGC > SRR4302543.6460388/1‑94 (MQ=60)
GATAATCATGGCGATAACGGGCGATAACTGCAGGCAGAATGTAGTTACCGATGGTACCACTGGCATAGATACGAATCGCGCCGTTGTCTTCGCG < SRR4302543.7561109/94‑1 (MQ=60)
GATAATCATGGCGATAACGGGCGATAACTGCAGGCAGAATGTAGTTACCGATGGTACCACTGGCATAGATACGAATCGCCCCGTTGTCTTCGCG > SRR4302543.1688953/1‑94 (MQ=60)
ATAATCATGGCGATAACGGGCGATAACTGCAGGCAGAATGTAGTTACCGATGGTACCACTGGCATAGATACGAATCGCGCCGTTGTCTTCGCGA > SRR4302543.7157537/1‑94 (MQ=60)
AATCATGGCGAGAACGGGCGATAACTGCAGGCAGAATGTAGTTACCGCTGGTACCACTGGCATCGATACGAATAGCTCCTTTGTCCTCGCGAAA > SRR4302543.6307368/1‑94 (MQ=60)
CATGGCGATAACGGGCGATAACTGCAGGCAGAATGTAGTTACCGATGGTACCACTGGCATAGATACGAATCGCGCCGTTGTCTTCGCGAAACAG > SRR4302543.4350989/1‑94 (MQ=60)
CATGGCGATAACGGGCGATAACTGCAGGCAGAATGTAGTTACCGATGGTACCACTGGCATAGATACGAATCGCGCCGTTGTCTTCGCGAAACAG < SRR4302543.4334595/94‑1 (MQ=60)
CATGGCGATAACGGGCGATAACTGCAGGCAGAATGTAGTTACCGATGGTACCACTGGCATAGATACGAATCGCGCCGTTGTCTTCGCGAAACAG < SRR4302543.7771510/94‑1 (MQ=60)
CATGGCGATAACGGGCGATAACTGCAGGCAGAATGTAGTTACCGATGGCACCACTGGCATAGATACGAATCGCGCCGTTGTCTTCGCGAAATAG > SRR4302543.4226933/1‑94 (MQ=60)
ATGGCGATAACGGGCGATAACTGCAGGCAGAATGTAGTTACCGATGGTACCACTGGCATAGATACGAATCGCGCCGTTGTCTTCGCGAAACAGT < SRR4302543.1700325/94‑1 (MQ=60)
ATGGCGATAACGGGCGATAACTGCAGGCAGAATGTAGTTACCGATGGTACCACTGGCATAGATACGAATCGCGCCGTTGTCTTCGCGAAACAGT < SRR4302543.3891043/94‑1 (MQ=60)
TGGCGATAACGGGCGATAACTGCAGGCAGAATGTAGTTACCGATGGTACCACTGGCATAGATACGAATCGCGCCGTTGTCTTCGCGAAACAGTT < SRR4302543.4589238/94‑1 (MQ=60)
TGGCGATAACGGGCGATAACTGCAGGCAGAATGTAGTTACCGATGGTACCACTGGCATAGATACGAATCGCGCCGTTGTCTTCGCGAAACAGTT < SRR4302543.3985855/94‑1 (MQ=60)
GGCGATAACGGGCGATAACTGCAGGCAGAATGTAGTTACCGATGGTACCACTGGCATAGATACGAATCGCGCCGTTGTCTTCGCGAAACAGTTG < SRR4302543.1433817/94‑1 (MQ=60)
GGCGATAACGGGCGATAACTGCAGGCAGAATGTAGTTACCGATGGTACCACTGGCATAGATACGAATCGCGCCGTTGTCTTCGCGAAACAGTTG > SRR4302543.2489790/1‑94 (MQ=60)
GGCGATAACGGGCGATAACTGCAGGCAGAATGTAGTTACCGATGGTACCACTGGCATAGATACGAATCGCGCCGTTGTCTTCGCGAAACAGTTG < SRR4302543.6391396/94‑1 (MQ=60)
GGCGATAACGGGCGATAACTGCAGGCAGAATGTAGTTACCGATGGTACCACTGGCATAGATACGAATCGCGCCGTTGTCTTCGCGAAACAGTTG > SRR4302543.5377244/1‑94 (MQ=60)
GGCGATAACGGGCGATAACTGCAGGCAGAATGTAGTTACCGATGGTACCACTGGCATAGATACGAATCGCGCAGTTGTCTTCGCGAAACAGTTG > SRR4302543.2489791/1‑94 (MQ=60)
GCGATAACGGGCGATAACTGCAGGCAGAATGTAGTTACCGATGGTACCACTGGCATAGATACGAATCGCGCCGTTGTCTTCGCGAAACAGTTGT < SRR4302543.5818550/94‑1 (MQ=60)
CGCTAACGGGCGATAACTGCAGGCAGAATGTAGTTACCGATGGTACCACTGGCATAGATACGAATCGCGCCGTTGTCTTCGCGGAACAGTTGTT > SRR4302543.122465/1‑94 (MQ=60)
CGATAACGGGCGATAACTGCAGGCAGAATGTAGTTACCGATGGTACCACTGGCATAGATACGAATCGCGCCGTTGTCTTCGCGAAACAGTTGTT > SRR4302543.2652248/1‑94 (MQ=60)
GATAACGGGCGATAACTGCAGGCAGAATGTAGTTACCGATGGTACCACTGGCATAGATACGAATCGCGCCGTTGTCTTCGCGAAACAGTTGTTC > SRR4302543.6338913/1‑94 (MQ=60)
GATAACGGGCGATAACTGCAGGCAGAATGTAGTTACCGATGGTACCACTGGCATAGATACGAATCGCGCCGTTGTCTTCGCGAAACAGTTGTTC < SRR4302543.4633204/94‑1 (MQ=60)
ATAACGGGCGATAACTGCAGGCAGAATGTAGTTACCGATGGTACCACTGGCATAGATACGAATCGCGCCGTTGTCTTCGCGAAACAGTTGTTCG < SRR4302543.7308019/94‑1 (MQ=60)
ATAACGGGCGATAACTGCAGGCAGAATGTAGTTACCGATGGTACCACTGGCATAGATACGAATCGCGCCGTTGTCTTCGCGAAACAGTTGTTCG > SRR4302543.1808984/1‑94 (MQ=60)
ATAACGGGCGATAACTGCAGGCAGAATGTAGTTACCGATGGTACCACTGGCATAGATACGAATCGCGCCGTTGTCTTCGCGAAACAGTTGTTCG < SRR4302543.595931/94‑1 (MQ=60)
ATAACGGGCGATAACTGCAGGCAGAATGTAGTTACCGATGGTACCACTGGCATAGATACGAATCGCGCCGTTGTCTTCGCGAAACAGTTGTTCG < SRR4302543.5140443/94‑1 (MQ=60)
CGGGCGATAACTGCAGGCAGAATGTAGTTACCGATGGTACCACTGGCATAGATACGAATCGCGCCGTTGTCTTCGCGAAACAGTTGTTCGATTT < SRR4302543.3296347/94‑1 (MQ=60)
CGGGCGATAACTGCAGGCAGAATGTAGTTACCGATGGTACCACTGGCATAGATACGAATCGCGCCGTTGTCTTCGCGAAACAGTTGTTCGATTT > SRR4302543.7200820/1‑94 (MQ=60)
GGGCGATAACTGCAGGCAGAATGTAGTTACCGATGGTACCACTGGCATAGATACGAATCGCGCCGTTGTCTTCGCGAAACAGTTGTTCGATTTC > SRR4302543.5516143/1‑94 (MQ=60)
GCGATAACTGCAGGCAGAATGTAGTTACCGATGGTACCACTGGCATAGATACGAATCGCGCCGTTGTCTTCGCGAAACAGTTGTTCGATTTCAA < SRR4302543.726706/94‑1 (MQ=60)
GATAACTGCAGGCAGAATGTGGTTGCCGATGGTGCCACTGGCATAGATACGAATCGCGCCGTTGTCTTCGCGAAACAGTTGTTCGATTTCAACC < SRR4302543.1998422/94‑1 (MQ=60)
GATAACTGCAGGCAGAATGTAGTTACCGATGGTACCACTGGCATAGATACGAATCGCGCCGTTGTCTTCGCGAAACAGTTGTTCGATTTCAACC < SRR4302543.7557694/94‑1 (MQ=60)
GATAACTGCAGGCAGAATGTAGTTACCGATGGTACCACTGGCATAGATACGAATCGCGCCGTTGTCTTCGCGAAACAGTTGTTCGATTTCAACC < SRR4302543.7507397/94‑1 (MQ=60)
GATAACTGCAGGCAGAATGTAGTTACCGATGGTACCACTGGCATAGATACGAATCGCGCCGTTGTCTTCGCGAAACAGTTGTTCGATTTCAACC < SRR4302543.5137823/94‑1 (MQ=60)
GATAACTGCAGGCAGAATGTAGTTACCGATGGTACCACTGGCATAGATACGAATCGCGCCGTTGTCTTCGCGAAACAGTTGTTCGATTTCAACC < SRR4302543.6006247/94‑1 (MQ=60)
GATAACTGCAGGCAGAATGTAGTTACCGATGGTACCACTGGCATAGATACGAATCGCGCCGTTGTCTTCGCGAAACAGTTGTTCGATTTCAACC < SRR4302543.2179864/94‑1 (MQ=60)
ATAACTGCAGGCAGAATGTAGTTACCGATGGTACTACTGGCATAGATACGAATCGCGCCGTTGTCTTCGCGAAACAGTTGTTCGATTTCAACCG < SRR4302543.7199209/94‑1 (MQ=60)
ATAACTGCAGGCAGAATGTAGTTACCGATGGTACCACTGGCATAGATACGAATCGCGCCGTTGTCTTCGCGAAACAGTTGTTCGATTTCAACCG > SRR4302543.4089435/1‑94 (MQ=60)
ATAACTGCAGGCAGAATGTAGTTACCGATGGTACCACTGGCATAGATACGAATCGCGCCGTTGTCTTCGCGAAACAGTTGTTCGATTTCAACCG > SRR4302543.688027/1‑94 (MQ=60)
TAACTGCAGGCAGAATGTAGTTACCGATGGTACCACTGGCATAGATACGAATCGCGCCGTTGTCTTCGCGAAACAGTTGTTCGATTTCAACCGC > SRR4302543.3870318/1‑94 (MQ=60)
AACTGCAGGCAGAATGTAGTTACCGATGGTACCACTGGCATAGATACGAATCGCGCCGTTGTCTTCGCGAAACAGTTGTTCGATTTCAACCGCC > SRR4302543.4702398/1‑94 (MQ=60)
GCAGGCAGAATGTAGTTACCGATGGTACCACTGGCATAGATACGAATCGCGCCGTTGTCTTCGCGAAACAGTTGTTCGATTTCAACCGCCTGTT < SRR4302543.5489904/94‑1 (MQ=60)
AGGCAGAATGTAGTTACCGATGGTACCACTGGCATAGATACGAATCGCGCCGTTGTCTTCGCGAAACAGTTGTTCGATTTCAACCGCCTGTTCA < SRR4302543.2135504/94‑1 (MQ=60)
CAGAATGTAGTTACCGATGGTACCACTGGCATAGATACGAATCGCGCCGTTGTCTTCGCGAAACAGTTGTTCGATTTCAACCGCCTGTTCAAGC > SRR4302543.1563446/1‑94 (MQ=60)
AGAATGTAGTTACCGATGGTACCACTGGCATAGATACGAATCGCGCCGTTGTCTTCGCGAAACAGTTGTTCGATTTCAACCGCCTGTTCAAGCA > SRR4302543.7541611/1‑94 (MQ=60)
AGAATGTAGTTACCGATGGTACCACTGGCATAGATACGAATCGCGCCGTTGTCTTCGCGAAACAGTTGTTCGATTTCAACCGCCTGTTCAAGCA > SRR4302543.4516794/1‑94 (MQ=60)
GAATGTAGTTACCGATGGTACCACTGGCATAGATACGAATCGCGCCGTTGTCTTCGCGAAACAGTTGTTCGATTTCAACCGCCTGTTCAAGCAA > SRR4302543.5006007/1‑94 (MQ=60)
AATGTAGTTACCGATGGTACTACTGGCATAGATACGAATCGCGCCGTTGTCTTCGCGAAACAGTTGTTCGATTTCAACCGCCTGTTCAAGCAAT > SRR4302543.4075327/1‑94 (MQ=60)
AATGTAGTTACCGATGGTACCACTGGCATAGATACTAATCGCGCCGTTGTCTTCGCGAAACAGTTGTTCGATTTCAACCGCCTGTTCAAGCAAT > SRR4302543.4918089/1‑94 (MQ=60)
AATGTAGTTACCGATGGTACCACTGGCATAGATACGAATCGCGCCGTTGTCTTCGCGAAACAGTTGTTCGATTTCAACCGCCTGTTCAAGCAAT > SRR4302543.7511105/1‑94 (MQ=60)
AATGTAGTTACCGATGGTACCACTGGCATAGATACGAATCGCGCCGTTGTCTTCGCGAAACAGTTGTTCGATTTCAACCGCCTGTTCAAGCAAT < SRR4302543.173411/94‑1 (MQ=60)
AATGTAGTTACCGATGGTACCACTGGCATAGATACGAATCGCGCCGTTGTCTTCGCGAAACAGTTGCTCGATTTCAACCGCCTGTTCAAGCAAT < SRR4302543.541554/94‑1 (MQ=60)
ATGTAGTTACCGATGGTACCACTGGCATAGATACGAATCGCGCCGTTGTCTTCGCGAAACAGTTGTTCGATTTCAACCGCCTGTTCAAGCAATG > SRR4302543.2821536/1‑94 (MQ=60)
ATGTAGTTACCGATGGTACCACTGGCATAGATACGAATCGCGCCGTTGTCTTCGCGAAACAGTTGTTCGATTTCAACCGCCTGTTCAAGCAATG < SRR4302543.7270767/94‑1 (MQ=60)
TGTAGTTACCGATGGTACCACTGGCATAGATACGAATCGCGCCGTTGTCTTCGCGAAACAGTTGTTCGATTTCAACCGCCTGTTCAAGCAATGC > SRR4302543.3966937/1‑94 (MQ=60)
AGTTACCGATGGTACCACTGGCATAGATACGAATCGCGCCGTTGTCTTCGCGAAACAGTTGTTCGATTTCAACCGCCTGTTCAAGCAATGCCAA < SRR4302543.4739417/94‑1 (MQ=60)
GTTACCGATGGTACCACTGGCATAGATACGAATCGCGCCGTTGTCTTCGCGAAACAGTTGTTCGATTTCAACCGCCTGTTCAAGCAATGCCAAC > SRR4302543.5126810/1‑94 (MQ=60)
TTACCGATGGTACCACTGGCATAGATACGAATCGCGCCGTTGTCTTCGCGAAACAGTTGTTCGATTTCAACCGCCTGTTCAAGCAATGCCAACG > SRR4302543.173410/1‑94 (MQ=60)
TTACCGATGGTACCACTGGCATAGATACGAATCGCGCCGTTGTCTTCGCGAAACAGTTGTTCGATTTCAACCGCCTGTTCAAGCAATGCCAACG < SRR4302543.6030126/94‑1 (MQ=60)
TTACCGATGGTACCACTGGCATAGATACGAATCGCGCCGTTGTCTTCGCGAAACAGTTGTTCGATTTCAACCGCCTGTTCAAGCAATGCCAACG > SRR4302543.4101109/1‑94 (MQ=60)
TACCGATGGTACCACTGGCATAGATACGAATCGCGCCGTTGTCTTCGCGAAACAGTTGTTCGATTTCAACCGCCTGTTCAAGCAATGCCAACGC < SRR4302543.3974869/94‑1 (MQ=60)
ACCGATGGTACCACTGGCATAGATACGAATCGCGCCGTTGTCTTCGCGAAACAGTTGTTCGATTTCAACCGCCTGTTCAAGCAATGCCAACGCA > SRR4302543.5652305/1‑94 (MQ=60)
CCGATTGTACCACTGGCATAGATACGAATCGCGCCGTTGTCTTCGCGAAACAGTTGTTCGATTTCAACCGCCTGTTCAAGCAATGCCAACGCAC < SRR4302543.6423519/94‑1 (MQ=60)
CCGATGGTACCACTGGCATAGATACGAATCGCGCCGTTGTCTTCGCGAAACAGTTGTTCGATTTCAACCGCCTGTTCAAGCAATGCCAACGCCC < SRR4302543.3498575/94‑1 (MQ=60)
GATGGTACCACTGGCATAGATACGAATCGCGCCGTTGTCTTCGCGAAACAGTTGTTCGATTTCAACCGCCTGTTCAAGCAATGCCAACGCACGC > SRR4302543.7961369/1‑94 (MQ=60)
ATGGTACCACTGGCATAGATACGAATCGCGCCGTTGTCTTCGCGAAACAGTTGTTCGATTTCAACCGCCTGTTCAAGCAATGCCAACGCACGCG < SRR4302543.278773/94‑1 (MQ=60)
ATGGTACCACTGGCATAGATACGAATCGCGCCGTTGTCTTCGCGAAACAGTTGTTCGATTTCAACCGCCTGTTCAAGCAATGCCAACGCACGCG > SRR4302543.7269354/1‑94 (MQ=60)
TGGTACCACTGGCATAGATACGAATCGCGCCGTTGTCTTCGCGAAACAGTTGTTCGATTTCAACCGCCTGTTCAAGCAATGCCAACGCACGCGG < SRR4302543.5121678/94‑1 (MQ=60)
TGGTACCACTGGCATAGATACGAATCGCGCCGTTGTCTTCGCGAAACAGTTGTTCGATTTCAACCGCCTGTTCAAGCAATGCCAACGCACGCGG > SRR4302543.5099907/1‑94 (MQ=60)
GTACCACTGGCATAGATACGAATCGCGCCGTTGTCTTCGCGAAACAGTTGTTCGATTTCAACCGCCTGTTCAAGCAATGCCAACGCACGCGGAT > SRR4302543.3131517/1‑94 (MQ=60)
GTACCACTGGCATAGATACGAATCGCGCCGTTGTCTTCGCGAAACAGTTGTTCGATTTCAACCGCCTGTTCAAGCAATGCCAACGCACGCGGAT > SRR4302543.4775213/1‑94 (MQ=60)
CACTGGCATAGATACGAATCGCGCCGTTGTCTTCGCGAAACAGTTGTTCGATTTCAACCGCCTGTTCAAGCAATGCCAACGCACGCGGATAGAG > SRR4302543.5582858/1‑94 (MQ=60)
|
GGCTATTCCCAACGCTAAGTTCAATCGGCAACTGCGGATAATCATGGCGATAACGGGCGATAACTGCAGGCAGAATGTAGTTACCGATGGTACTACTGGCATAGATACGAATCGCGCCGTTGTCTTCGCGAAACAGTTGTTCGATTTCAACCGCCTGTTCAAGCAATGCCAACGCACGCGGATAGAG > NC_000913/2247257‑2247443
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| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 28 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
