Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I1 R1
|
1696 |
279.3 |
15874187 |
97.8% |
15524954 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
2,284,989 |
(C)5→4 |
coding (1932/2511 nt) |
yejO ← |
putative ATP‑binding component of a transport system |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 2,284,985 | 0 | C | . | 100.0%
| 916.1
/ NA
| 202 | coding (1936/2511 nt) | yejO | putative ATP‑binding component of a transport system |
| Reads supporting (aligned to +/- strand): ref base C (0/0); new base . (82/120); total (82/120) |
Only 100 of 233 total aligned reads displayed.
ACTCATCTTGCCATGGATGGTGTTGGCAAAACGGTCAACTTTCACCACCCCATCAACATAGGCACCGTTCTGATGCTCCCAACCGGCATAAGCCCCCAGGGTATAGCTATCGATATTACCTTTGCCGCCGCGATCAAAACCAATATCAGAATGAGAGTAACCAAAGATCAAGCCGCGAATT > NC_000913/2284893‑2285073
|
aCTCATCTTGCCATGGATGGTGTTGGCAAAACGGTCAACTTTCACCACCCCATCAACATAGGCACCGTTCTGATGCTCCCAACCGGCATAAGc > 2:7207621/1‑93 (MQ=255)
cTCATCTTGCCATGGATGGTGTTGGCAAAACGGTCAACTTTCACCACCCCATCAACATAGGCACCGTTCTGATGCTCCCAACCGGCATAAGcc > 2:6694758/1‑93 (MQ=255)
cATCTTGCCATGGATGGTGTTGGCAAAACGGTCAACTTTCACCACCCCATCAACATAGGCACCGTTCTGATGCTCCCAACCGGCATAAGcccc < 2:2136619/93‑1 (MQ=255)
aTCTTGCCATGGATGGTGTTGGCAAAACGGTCAACTTTCACCACCCCATCAACATAGGCACCGTTCTGATGCTCCCAACCGGCATAAGcccca < 2:730160/93‑2 (MQ=255)
aTCTTGCCATGGATGGTGTTGGCAAAACGGTCAACTTTCACCACCCCATCAACATAGGCACCGTTCTGATGCTCCCAACCGGCATAAGcccca > 2:4534104/1‑92 (MQ=255)
tCTTGCCATGGATGGTGTTGGCAAAACGGTCAACTTTCACCACCCCATCAACATAGGCACCGTTCTGATGCTCCCAACCGGCATAAGccccag > 1:7439264/1‑91 (MQ=255)
tCTTGCCATGGATGGTGTTGGCAAAACGGTCAACTTTCACCACCCCATCAACATAGGCACCGTTCTGATGCTCCCAACCGGCATAAGccccag > 2:2727411/1‑91 (MQ=255)
tCTTGCCATGGATGGTGTTGGCAAAACGGTCAACTTTCACCACCCCATCAACATAGGCACCGTTCTGATGCTCCCAACCGGCATAAGccccag > 1:5822044/1‑91 (MQ=255)
ttGCCATGGATGGTGTTGGCAAAACGGTCAACTTTCACCACCCCATCAACATAGGCACCGTTCTGATGCTCCCAACCGGCATAAGccccaggg < 2:4967512/93‑5 (MQ=255)
tGCCATGGATGGTGTTGGCAAAACGGTCAACTTTCACCACCCCATCAACATAGGCACCGTTCTGATGCTCCCAACCGGCATAAG‑CCCCAGGGt < 1:4903907/93‑1 (MQ=255)
tGCCATGGATGGGGTTGGCAAAACGGTCAACTTTCACCACCCCATCAACATAGGCACCGTTCTGATGCTCCCAACCGGCATAAGcccccggcg > 2:6007878/1‑89 (MQ=255)
tggatggTGTTGGCAAAACGGTCAACTTTCTCCACCCCATCAACATAGGCACCGTTCTGATGCTCCCAACCGGCATAAG‑CCCCAGGGTATAGc > 1:3744089/1‑93 (MQ=255)
tggatggTGTTGGCAAAACGGTCAACTTTCACCACCCCATCAACATAGGCACCGTTCTGATGCTCCCAACCGGCATAAG‑CCCCAGGGTATAGc > 2:5855473/1‑93 (MQ=255)
tggatggTGTTGGCAAAACGGTCAACTTTCACCACCCCATCAACATAGGCACCGTTCTGATGCTCCCAACCGGCATAAG‑CCCCAGGGTATAGc < 2:426768/93‑1 (MQ=255)
tggatggTGTTGGCAAAACGGTCAACTTTCACCACCCCATCAACATAGGCACCGTTCTGATGCTCCCAACCGGCATAAG‑CCCCAGGGTATAGc > 2:980147/1‑93 (MQ=255)
gatggTGTTGGCAAAACGGTCAACTTTCACCACCCCATCAACATAGGCACCGTTCTGATGCTCCCAACCGGCATAAG‑CCCCAGGGTATAGCTa > 1:3587210/1‑93 (MQ=255)
gatggTGTTGGAAAAACGGTCAACTTTCACCACCCCATCAACATAGGCACCGTTCTGATGCTCCCAACCGGCATAAG‑CCCCAGGGTATAGCTa < 2:1329190/93‑1 (MQ=255)
atggTGTTGGCAAAACGGTCAACTTTCACCACCCCATCAACATAGGCACCGTTCTGATGCTCCCAACCGGCATAAG‑CCCCAGGGTATAGCTAt < 2:7143299/93‑1 (MQ=255)
tggTGTTGGCAAAACGGTCAACTTTCACCACCCCATCAACATAGGCACCGTTCTGATGCTCCCAACCGGCATAAG‑CCCCAGGGTATAGCTATc < 1:3137975/93‑1 (MQ=255)
tggTGTTGGCAAAACGGTCAACTTTCACCACCCCATCAACATAGGCACCGTTCTGATGCTCCCAACCGGCATAAG‑CCCCAGGGTATAGCTATc < 1:4552704/93‑1 (MQ=255)
tggTGTTGGCAAAACGGTCAACTTTCACCACCCCATCAACATAGGCACCGTTCTGATGCTCCCAACCGGCATAAG‑CCCCAGGGTATAGCTATc < 2:7119068/93‑1 (MQ=255)
tggTGTTGGCAAAACGGTCAACTTTCACCACCCCATCAACATAGGCACCGTTCTGATGCTCCCAACCGGCATAAG‑CCCCAGGGTATAGCTATc > 1:6216153/1‑93 (MQ=255)
gtTGGCAAAACGGTCAACTTTCACCACCCCATCAACATAGGCACCGTTCTGATGCTCCCAACCGGCATAAG‑CCCCAGGGTATAGCTATCGata < 2:2913643/93‑1 (MQ=255)
ggCAAAACGGTCAACTTTCACCACCCCATCAACATAGGCACCGTTCTGATGCTCCCAACCGGCATAAG‑CCCCAGGGTATAGCTATCGATATTa > 2:4928328/1‑93 (MQ=255)
ggCAAAACGGTCAACTTTCACCACCCCATCAACATAGGCACCGTTCTGATGCTCCCAACCGGCATAAG‑CCCCAGGGTATAGCTATCGATATTa < 2:5572499/93‑1 (MQ=255)
gCAAAACGGTCAACTTTCACCACCCCATCAACATAGGCACCGTTCTGATGCTCCCAACCGGCATAAG‑CCCCAGGGTATAGCTATCGATATTAc < 2:1031290/93‑1 (MQ=255)
cAAAACGGTCAACTTTCACCACCCCATCAACATAGGCACCGTTCTGATGCTCCCAACCGGCATAAG‑CCCCAGGGTATAGCTATCGATATTAcc < 2:3816566/93‑1 (MQ=255)
aaaCGGTCAACTTTCACCACCCCATCAACATAGGCACCGTTCTGATGCTCCCAACCGGCATAAG‑CCCCAGGGTATAGCTATCGATATTACCtt < 1:409400/93‑1 (MQ=255)
aaCGGTCAACTTTCACCACCCCATCAACATAGGCACCGTTCTGATGCTCCCAACCGGCATAAG‑CCCCAGGGTATAGCTATCGATATTACCttt > 1:515059/1‑93 (MQ=255)
aaCGGTCAACTTTCACCACCCCATCAACATAGGCACCGTTCTGATGCTCCCAACCGGCATAAG‑CCCCAGGGTATAGCTATCGATATTACCttt > 1:2008637/1‑93 (MQ=255)
cGGTCAACCTTCACCACCCCATCAACATAGGCACCGTTCTGATGCTCCCAACCGGCATAAG‑CCCCAGGGTATAGCTATCGATTTTTCCTTTgc < 2:2644895/93‑1 (MQ=255)
ggTCAACTTTCACCACCCCATCAACATAGGCACCGTTCTGATGCTCCCAACCGGCATAAG‑CCCCAGGGTATAGCTATCGATATTACCTTTgcc < 2:3125132/93‑1 (MQ=255)
gTCAACTTTCACCACCCCATCAACATAGGCACCGTTCTGATGCTCCCAACCGGCATAAG‑CCCCAGGGTATAGCTATCGATATTACCTTTgccg > 2:7793157/1‑93 (MQ=255)
gTCAACTTTCACCACCCCATCAACATAGGCACCGTTCTGATGCTCCCAACCGGCATAAG‑CCCCAGGGTATAGCTATCGATATTACCTTTgccg > 2:6589202/1‑93 (MQ=255)
cAACTTTCACCACCCCATCAACATAGGCACCGTTCTGATGCTCCCAACCGGCATAAG‑CCCCAGGGTATAGCTATCGATATTACCTTTgccgcc > 1:1063933/1‑93 (MQ=255)
aaCTTTCACCACCCCATCAACATAGGCACCGTTCTGATGCTCCCAACCGGCATAAG‑CCCCAGGGTATAGCTATCGATATTACCTTTGccgccg < 2:1714860/93‑1 (MQ=255)
aCTTTCACCACCCCATCAACATAGGCACCGTTCTGATGCTCCCAACCGGCATAAG‑CCCCAGGGTATAGCTATCGATATTACCTTTGCcgccgc > 2:1542486/1‑93 (MQ=255)
tttCACCACCCCATCAACATAGGCACCGTTCTGATGCTCCCAACCGGCATAAG‑CCCCAGGGTATAGCTATCGATATTACCTTTGCCGCCGCGa < 2:421925/93‑1 (MQ=255)
accaccCCATCAACATAGGCACCGTTCTGATGCTCCCAACCGGCATAAG‑CCCCAGGGTATAGCTATCGATATTACCTTTGCCGCCGCGATCaa > 1:6140094/1‑93 (MQ=255)
accaccCCATCAACATAGGCACCGTTCTGATGCTCCCAACCGGCATAAG‑CCCCAGGGTATAGCTATCGATATTACCTTTGCCGCCGCGATCaa > 1:5605426/1‑93 (MQ=255)
ccaccCCATCAACATAGGCACCGTTCTGATGCTCCCAACCGGCATAAG‑CCCCAGGGTATAGCTATCGATATTACCTTTGCCGCCGCGATCaaa < 1:1288057/93‑1 (MQ=255)
caccCCATCAACATAGGCACCGTTCTGATGCTCCCAACCGGCATAAG‑CCCCAGGGTATAGCTATCGATATTACCTTTGCCGCCGCGATCaaaa < 2:5783501/93‑1 (MQ=255)
caccCCATCAACATAGGCACCGTTCTGATGCTCCCAACCGGCATAAG‑CCCCAGGGTATAGCTATCGATATTACCTTTGCCGCCGCGATCaaaa < 1:1079753/93‑1 (MQ=255)
caccCCATCAACATAGGCACCATTCTGATGCTCCCATCCGGCATAAG‑CCCCAGGGTATAGCTATCGATATTACCTTTGCCGCCGCCATCaaaa < 1:5924564/93‑1 (MQ=255)
ccccATCAACATAGGCACCGTTCTGATGCTCCCAACCGGCATAAG‑CCCCAGGGTATAGCTATCGATATTACCTTTGCCGCCGCGATCAAAAcc > 1:6064670/1‑93 (MQ=255)
ccccATCAACATAGGCACCGTTCTGATGCTCCCAACCGGCATAAG‑CCCCAGGGTATAGCTATCGATATTACCTTTGCCGCCGCGATCAAAAcc > 1:2800445/1‑93 (MQ=255)
cccATCAACATAGGCACCGTTCTGATGCTCCCAACCGGCCTAAG‑CCCCAGGGTATAGCTATCGATATTACCTTTGCCGCCGCGATCAAAACCa > 1:816702/1‑93 (MQ=255)
cccATCAACATAGGCACCGTTCTGATGCTCCCAACCGGCATAAG‑CCCCAGGGTATAGCTATCGATATTACCTTTGCCGCCGCGATCAAAACCa < 2:6102824/93‑1 (MQ=255)
cccATCAACATAGGCACCGTTCTGATGCTCCCAACCGGCATAAG‑CCCCAGGGTATAGCTATCGATATTACCTTTGCCGCCGCGATCAAAACCa < 1:1024076/93‑1 (MQ=255)
cccATCAACATAGGCACCGTTCTGATGCTCCCAACCGGCATAAG‑CCCCAGGGTATAGCTATCGATATTACCTTTGCCGCCGCGATCAAAACCa > 1:7800438/1‑93 (MQ=255)
cccATCAACATAGGCACCGTTCTGATGCTCCCAACCGGCATAAG‑CCCCAGGGTATAGCTATCGATATTACCTTTGCCGCCGCGATCAAAACCa > 1:6591728/1‑93 (MQ=255)
ccATCAACATAGGCACCGTTCTGATGCTCCCAACCGGCATAAG‑CCCCAGGGTATAGCTATCGATATTACCTTTGCCGCCGCGATCAAAACCaa < 2:2534838/93‑1 (MQ=255)
aTCAACATAGGCACCGTTCTGATGCTCCCAACCGGCATAAG‑CCCCAGGGTATAGCTATCGATATTACCTTTGCCGCCGCGATCAAAACCAata < 2:6960056/93‑1 (MQ=255)
aTCAACATAGGCACCGTTCTGATGCTCCCAACCGGCATAAG‑CCCCAGGGTATAGCTATCGATATTACCTTTGCCGCCGCGATCAAAACCAata > 1:1484386/1‑93 (MQ=255)
aTCAACATAGGCACCGTTCTGATGCTCCCAACCGGCATAAG‑CCCCAGGGTATAGCTATCGATATTACCTTTGCCGCCGCGATCAAAACCAata < 2:3489593/93‑1 (MQ=255)
aTCAACATAGGCACCGTTCTGATGCTCCCAACCGGCATAAG‑CCCCAGGGTATAGCTATCGATATTACCTTTGCCGCCGCGATCAAAACCAata > 2:2950263/1‑93 (MQ=255)
aaCATAGGCACCGTTCTGATGCTCCCAACCGGCATAAG‑CCCCAGGGTATAGCTATCGATATTACCTTTGCCGCCGCGATCAAAACCAATATCa < 2:1121868/93‑1 (MQ=255)
aaCATAGGCACCGTTCTGATGCTCCCAACCGGCATAAG‑CCCCAGGGTATAGCTATCGATATTACCTTTGCCGCCGCGATCAAAACCAATATCa < 1:7033185/93‑1 (MQ=255)
aaCATAGGCACCGTTCTGATGCTCCCAACCGGCATAAG‑CCCCAGGGTATAGCTATCGATATTACCTTTGCCGCCGCGATCAAAACCAATATCa > 2:4687525/1‑93 (MQ=255)
aaCATAGGCACCGTTCTGATGCTCCCAACCGGCATAAG‑CCCCAGGGTATAGCTATCGATATTACCTTTGCCGCCGCGATCAAAACCAATATCa < 2:2814766/93‑1 (MQ=255)
cATAGGCACCGTTCTGATGCTCCCAACCGGCATAAG‑CCCCAGGGTATAGCTATCGATATTACCTTTGCCGCCGCGATCAAAACCAATATCAGa > 1:7186750/1‑93 (MQ=255)
aTAGGCACCGTTCTGATGCTCCCAACCGGCATAAG‑CCCCAGGGTATAGCTATCGATATTACCTTTGCCGCCGCGATCAAAACCAATATCAGaa > 2:5387583/1‑93 (MQ=255)
tAGGCACCGTTCTGATGCTCCCAACCGGCATAAG‑CCCCAGGGTATAGCTATCGATATTACCTTTGCCGCCGCGATCAAAACCAATATCAGAAt > 2:6439828/1‑93 (MQ=255)
tAGGCACCGTTCTGATGCTCCCAACCGGCATAAG‑CCCCAGGGTATAGCTATCGATATTACCTTTGCCGCCGCGATCAAAACCAATATCAGAAt > 1:3816626/1‑93 (MQ=255)
aGGCACCGTTCTGATGCTCCCAACCGGCATAAG‑CCCCAGGGTATAGCTATCGATATTACCTTTGCCGCCGCGATCAAAACCAATATCAGAATg < 1:3709965/93‑1 (MQ=255)
gCACCGTTCTGATGCTCCCAACCGGCATAAG‑CCCCAGGGTATAGCTATCGATATTACCTTTGCCGCCGCGATCAAAACCAATATCAGAATgag > 1:3521616/1‑93 (MQ=255)
cACCGTTCTGATGCTCCCAACCGGCATAAG‑CCCCAGGGTATAGCTATCGATATTACCTTTGCCGCCGCGATCAAAACCAATATCAGAATgaga < 1:2060012/93‑1 (MQ=255)
cccGTTCTGATGCTCCCAACCGGCATAAG‑CCCCAGGGTATAGCTATCGATATTACCTTTGCCGCCGCGATCAAAACCAATATCAGAATGagag < 1:1511336/92‑1 (MQ=255)
aCCGTTCTGATGCTCCCAACCGGCATAAG‑CCCCAGGGTATAGCTATCGATATTACCTTTGCCGCCGCGATCAAAACCAATATCAGAATGagag > 2:4622457/1‑93 (MQ=255)
gTTCTGATGCTCCCAACCGGCATAAG‑CCCCAGGGTATAGCTATCGATATTACCTTTGCCGCCGCGATCAAAACCAATATCAGAATGAGAGTaa > 2:1374083/1‑93 (MQ=255)
ttCTGATGCTCCCAACCGGCATAAG‑CCCCAGGGTATAGCTATCGATATTACCTTTGCCGCCGCGATCAAAACCAATATCAGAATGAGAGTAAc < 1:5728710/93‑1 (MQ=255)
ttCTGATGCTCCCAACCGGCATAAG‑CCCCAGGGTATAGCTATCGATATTACCTTTGCCGCCGCGATCAAAACCAATATCAGAATGAGAGTAAc > 2:6308538/1‑93 (MQ=255)
ttCTGATGCTCCCAACCGGCATAAG‑CCCCAGGGTATAGCTATCGATATTACCTTTGCCGCCGCGATCAAAACCAATATCAGAATGAGAGTAAc < 1:3431032/93‑1 (MQ=255)
tGATGCTCCCAACCGGCATAAG‑CCCCAGGGTATAGCTATCGATATTACCTTTGCCGCCGCGATCAAAACCAATATCAGAATGAGAGTAACCaa > 1:7519049/1‑93 (MQ=255)
gATGCTCCCAACCGGCATAAG‑CCCCAGGGTATAGCTATCGATATTACCTTTGCCGCCGCGATCAAAACCAATATCAGAATGAGAGTAACCaaa < 1:7480046/93‑1 (MQ=255)
aTGCTCCCAACCGGCATAAG‑CCCCAGGGTATAGCTATCGATATTACCTTTGCCGCCGCGATCAAAACCAATATCAGAATGAGAGTAACCAAAg < 1:995632/93‑1 (MQ=255)
aTGCTCCCAACCGGCATAAG‑CCCCAGGGTATAGCTATCGATATTACCTTTGCCGCCGCGATCAAAACCAATATCAGAATGAGAGTAACCAAAg < 1:7598761/93‑1 (MQ=255)
tGCTCCCAACCGGCATAAG‑CCCCAGGGTATAGCTATCGATATTACCTTTGCCGCCGCGATCAAAACCAATATCAGAATGAGAGTAACCAAAGa > 1:6025820/1‑93 (MQ=255)
tGCTCCCAACCGGCATAAG‑CCCCAGGGTATAGCTATCGATATTACCTTTGCCGCCGCGATCAAAACCAATATCAGAATGAGAGTAACCAAAGa > 1:2319580/1‑93 (MQ=255)
gCTCCCAACCGGCATAAG‑CCCCAGTGTATAGCTATCGATATTACCTTTGCCGCCGCGATCAAAACCAATATCAGAATGAGAGTAACCAAAGAt < 1:2556221/93‑1 (MQ=255)
gCTCCCAACCGGCATAAG‑CCCCAGGGTATAGCTATCGATATTACCTTTGCCGCCGCGATCAAAACCAATATCAGAATGAGAGTAACCAAAGAt < 2:5244949/93‑1 (MQ=255)
gCTCCCAACCGGCATAAG‑CCCCAGGGTATAGCTATCGATATTACCTTTGCCGCCGCGATCAAAACCAATATCAGAATGAGAGTAACCAAAGAt < 2:3028648/93‑1 (MQ=255)
gCTCCCAACCGGCATAAG‑CCCCAGGGTATAGCTATCGATATTACCTTTGCCGCCGCGATCAAAACCAATATCAGAATGAGAGTAACCAAAGAt > 2:3728596/1‑93 (MQ=255)
cTCCCAACCGGCATAAG‑CCCCAGGGTATAGCTATCGATATTACCTTTGCCGCCGCGATCAAAACCAATATCAGAATGAGAGTAACCAAAGATc > 2:1688744/1‑93 (MQ=255)
ccAACCGGCATAAG‑CCCCAGGGTATAGCTATCGATATTACCTTTGCCGCCGCGATCAAAACCAATATCAGAATGAGAGTAACCAAAGATCAAg < 1:2865429/93‑1 (MQ=255)
ccAACCGGCATAAG‑CCCCAGGGTATAGCTATCGATATTACCTTTGCCGCCGCGATCAAAACCAATATCAGAATGAGAGTAACCAAAGATCAAg < 2:3363719/93‑1 (MQ=255)
aaCCGGCATAAG‑CCCCAGGGTATAGCTATCGATATTACCTTTGCCGCCGCGATCAAAACCAATATCAGAATGAGAGTAACCAAAGATCAAGcc > 2:231031/1‑93 (MQ=255)
aaCCGGCATAAG‑CCCCAGGGTATAGCTATCGATATTACCTTTGCCGCCGCGATCAAAACCAATATCAGAATGAGAGTAACCAAAGATCAAGcc < 1:3022425/93‑1 (MQ=255)
ccGGCATAA‑TCCCCAGGTTATAGCTATCGATTTTACCTTTGCCCACGCGATCAAAACCAATATCAGAATGAGAGTAACCAAAGATCAAGCcgc < 2:1343120/93‑1 (MQ=255)
cGGCATAAG‑CCCCAGGGTATAGCTATCGATATTACCTTTGCCGCCGCGATCAAAACCAATATCAGAATGAGAGTAACCAAAGATCAAGCcgcg > 2:4368013/1‑93 (MQ=255)
cGGCATAAG‑CCCCAGGGTATAGCTATCGATATTACCTTTGCCGCCGCGATCAAAACCAATATCAGAATGAGAGTAACCAAAGATCAAGCcgcg < 1:6424625/93‑1 (MQ=255)
cGGCATAAG‑CCCCAGGGTATAGCTATCGATATTACCTTTGCCGCCGCGATCAAAACCAATATCAGAATGAGAGTAACCAAAGATCAAGCcgcg > 1:6384669/1‑93 (MQ=255)
ggCATAAG‑CCCCAGGGTATAGCTATCGATATTACCTTTGCCGCCGCGATCAAAACCAATATCAGAATGAGAGTAACCAAAGATCAAGCCGCGa < 2:7705564/93‑1 (MQ=255)
gCATAAG‑CGCCAGGGTATAGCTTTCGATATTACCTTTGCCGCCGCGATCAAAACCAAAATCAGAATGAGAGTAACCAAAGATCAAGCGGCGaa < 2:4980412/93‑1 (MQ=255)
gCATAAG‑CCCCAGGGTATAGCTATCGATATTACCTTTGCCGCCGCGATCAAAACCAATATCAGAATGAGAGTAACCAAAGATCAAGCCGCGaa < 1:3301020/93‑1 (MQ=255)
cATAAG‑CCCCAGGGTATAGCTATCGATATTACCTTTGCCGCCGCGATCAAAACCAATATCAGAATGAGAGTAACCAAAGATCAAGCCGCGAAt < 2:570212/93‑1 (MQ=255)
aTAAG‑CCCCAGGGTATAGCTATCGATATTACCTTTGCCGCCGCGATCAAAACCAATATCAGAATGAGAGTAACCAAAGATCAAGCCGCGAAtt > 2:2430259/1‑93 (MQ=255)
aTAAG‑CCCCAGGGTATAGCTATCGATATTACCTTTGCCGCCGCGATCAAAACCAATATCAGAATGAGAGTAACCAAAGATCAAGCCGCGAAtt > 1:7151265/1‑93 (MQ=255)
aTAAG‑CCCCAGGGTATAGCTATCGATATTACCTTTGCCGCCGCGATCAAAACCAATATCAGAATGAGAGTAACCAAAGATCAAGCCGCGAAtt < 2:7536555/93‑1 (MQ=255)
aTAAG‑CCCCAGGGTATAGCTATCGATATTACCTTTGCCGCCGCGATCAAAACCAATATCAGAATGAGAGTAACCAAAGATCAAGCCGCGAAtt < 1:1061899/93‑1 (MQ=255)
|
ACTCATCTTGCCATGGATGGTGTTGGCAAAACGGTCAACTTTCACCACCCCATCAACATAGGCACCGTTCTGATGCTCCCAACCGGCATAAGCCCCCAGGGTATAGCTATCGATATTACCTTTGCCGCCGCGATCAAAACCAATATCAGAATGAGAGTAACCAAAGATCAAGCCGCGAATT > NC_000913/2284893‑2285073
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 18 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
TTGCCATGGATGGTGTTGGCAAAACGGTCAACTTTCACCACCCCATCAACATAGGCACCGTTCTGATGCTCCCAACCGGCATAAGCCCCCAGGGTATAGCTATCGATATTACCTTTGCCGCCGCGATCAAAACCAATATCAGAATGAGAGTAACCAAAGATCAAGCCGCGAATTGTACTGCTT > NC_000913/2284900‑2285082
|
TTGCCATGGATGGTGTTGGCAAAACGGTCAACTTTCACCCCCCCATCAACATAGGCACCGTTCTGATGCTCCCAACCGGCATAAG‑CCCCAGGGT < SRR4302543.2940146/94‑1 (MQ=60)
TGCCATGGATGGTGTTGGCAAAACGGTCAACTTTCACCACCCCATCAACATAGGCACCGTTCTGATGCTCCCAACCGGCATAAG‑CCCCAGGGTA < SRR4302543.4948600/94‑1 (MQ=60)
TGCCATGGATGGTATTGGCCAAACGGTCAACTTTCACCACCCCATCAACATAGGCACCGTTCTGATGCTCCCAACCGGCATAAG‑CCCCAGGGTA < SRR4302543.7110402/94‑1 (MQ=60)
GCCATGGATGGTGTTGGCAAAACGGTCAACTTTCACCACCCCATCAACATAGGCACCGTTCTGATGCTCCCAACCGGCATAAG‑CCCCAGGGTAT < SRR4302543.3768636/94‑1 (MQ=60)
ATGGATGGTGTTGGCAAAACGGTCAACTTTCTCCACCCCATCAACATAGGCACCGTTCTGATGCTCCCAACCGGCATAAG‑CCCCAGGGTATAGC > SRR4302543.3777023/1‑94 (MQ=60)
ATGGATGGTGTTGGCAAAACGGTCAACTTTCACCACCCCATCAACATAGGCACCGTTCTGATGCTCCCAACCGGCATAAG‑CCCCAGGGTATAGC > SRR4302543.261122/1‑94 (MQ=60)
TGGATGGTGTTGGCAAAACGGTCAACTTTCACCACCCCATCAACATAGGCACCGTTCTGATGCTCCCAACCGGCATAAG‑CCCCAGGGTATAGCT < SRR4302543.4191637/94‑1 (MQ=60)
GGATGGTGTTGGCAAAACGGTCAACTTTCACCACCCCATCAACATAGGCACCGTTCTGATGCTCCCAACCGGCATAAG‑CCCCAGGGTATAGCTA > SRR4302543.3618888/1‑94 (MQ=60)
GGATGGTGTTGGCAAAACGGTCAACTTTCACCACCCCATCAACATAGGCACCGTTCTGATGCTCCCAACCGGCATAAG‑CCCCAGGGTATAGCTA > SRR4302543.3618887/1‑94 (MQ=60)
ATGGTGTTGGCAAAACGGTCAACTTTCACCACCCCATCAACATAGGCACCGTTCTGATGCTCCCAACCGGCATAAG‑CCCCAGGGTATAGCTATC < SRR4302543.5874198/94‑1 (MQ=60)
ATGGTGTTGGCAAAACGGTCAACTTTCACCACCCCATCAACATAGGCACCGTTCTGATGCTCCCAACCGGCATAAG‑CCCCAGGGTATAGCTATC > SRR4302543.6274833/1‑94 (MQ=60)
TGGTGTTGGCAAAACGGTCAACTTTCACCACCCCATCAACATAGGCACCGTTCTGATGCTCCCAACCGGCATAAG‑CCCCAGGGTATAGCTATCG < SRR4302543.4594162/94‑1 (MQ=60)
TGGTGTTGGCAAAACGGTCAACTTTCACCACCCCATCAACATAGGCACCGTTCTGATGCTCCCAACCGGCATAAG‑CCCCAGGGTATAGCTATCG < SRR4302543.3166199/94‑1 (MQ=60)
TGGTGTTGGCAAAACGGTCAACTTTCACCACCCCATCAACATAGGCACCGTTCTGATGCTCCCAACCGGCATAAG‑CCCCAGGGTATAGCTATCG < SRR4302543.7355538/94‑1 (MQ=60)
GTGTTGGCAAAACGGTCAACTTTCACCACCCCATCAACATAGGCACCGTTCTGATGCTCCCAACCGGCATAAG‑CCCCAGGGTATAGCTATCGAT < SRR4302543.3820823/94‑1 (MQ=60)
GTGTTGGCAAAACGGTCAACTTTCACCACCCCATCAACATAGGCACCGTTCTGATGCTCCCAACCGGCATAAG‑CCCCAGGGTATAGCTATCGAT < SRR4302543.6473945/94‑1 (MQ=60)
GTTGGCAAAACGGTCAACTTTCACCACCCCATCAACATAGGCACCGTTCTGATGCTCCCAACCGGCATAAG‑CCCCAGGGTATAGCTATCGATAT < SRR4302543.237746/94‑1 (MQ=60)
GTTGGCAAAACGGTCAACTTTCACCACCCCATCAACATAGGCACCGTTCTGATGCTCCCAACCGGCATAAG‑CCCCAGGGTATAGCTATCGATAT < SRR4302543.1008411/94‑1 (MQ=60)
GTTGGCAAAACGGTCAACTTTCACCACCCCATCAACATAGGCACCGTTCTGATGCTCCCAACCGGCATAAG‑CCCCAGGGTATAGCTATCGATAT > SRR4302543.928647/1‑94 (MQ=60)
TTGGCAAAACGGTCAACTTTCACCACCCCATCAACATAGGCACCGTTCTGATGCTCCCAACCGGCATAAG‑CCCCAGGGTATAGCTATCGATATT < SRR4302543.6117963/94‑1 (MQ=60)
GGCAAAACGGTCAACTTTCACCACCCCATCAACATAGGCACCGTTCTGATGCTCCCAACCGGCATAAG‑CCCCAGGGTATAGCTATCGATATTAC < SRR4302543.2443200/94‑1 (MQ=60)
GAAAACGGTCAACTTTCACCACCCCATCAACATAGGCACCGTTCTGATGCTCCCAACCGGCATAAG‑CCCCAGGGTATAGCTATCGATATTACCT < SRR4302543.361226/94‑1 (MQ=60)
CAAAACGGTCAACTTTCACCACCCCATCAACATAGGCACCGTTCTGATGCTCCCAACCGGCATAAG‑CCCCAGGGTATAGCTATCGATATTACCT < SRR4302543.5875468/94‑1 (MQ=60)
AAAACGGTCAACTTTCACCACCCCATCAACATAGGCACCGTTCTGATGCTCCCAACCGGCATAAG‑CCCCAGGGTATAGCTATCGATATTACCTT > SRR4302543.3261054/1‑94 (MQ=60)
AAAACGGTCAACTTTCACCACCCCATCAACATAGGCACCGTTCTGATGCTCCCAACCGGCATAAG‑CCCCAGGGTATAGCTATCGATATTACCTT > SRR4302543.2299720/1‑94 (MQ=60)
AAACGGTCAACTTTCACCACCCCATCAACATAGGCACCGTTCTGATGCTCCCAACCGGCATAAG‑CCCCAGGGTATAGCTATCGATATTACCTTT > SRR4302543.2026688/1‑94 (MQ=60)
AAACGGTCAACTTTCACCACCCCATCAACATAGGCACCGTTCTGATGCTCCCAACCGGCATAAG‑CCCCAGGGTATAGCTATCGATATTACCTTT < SRR4302543.413182/94‑1 (MQ=60)
AAACGGTCAACTTTCACCACCCCATCAACATAGGCACCGTTCTGATGCTCCCAACCGGCATAAG‑CCCCAGGGTATAGCTATCGATATTACCTTT > SRR4302543.519847/1‑94 (MQ=60)
ACGGTCAACTTTCACCACCCCATCAACATAGGCACCGTTCTGATGCTCCCAACCGGCATAAG‑CCCCAGGGTATAGCTATCGATATTACCTTTGC < SRR4302543.72288/94‑1 (MQ=60)
CGGTCAACTTTCACCACCCCATCAACATAGGCACCGTTCTGATGCTCCCAACCGGCATAAG‑CCCCAGGGTATAGCTATCGATATTACCTTTGCC > SRR4302543.1094826/1‑94 (MQ=60)
GTCAACTTTCACCACCCCATCAACATAGGCACCGTTCTGATGCTCCCAACCGGCATAAG‑CCCCAGGGTATAGCTATCGATATTACCTTTGCCGC > SRR4302543.598780/1‑94 (MQ=60)
GTCAACTTTCACCACCCCATCAACATAGGCACCGTTCTGATGCTCCCAACCGGCATAAG‑CCCCAGGGTATAGCTATCGATATTACCTTTGCCGC > SRR4302543.1455116/1‑94 (MQ=60)
TCAACTTTCACCACCCCATCAACATAGGCACCGTTCTGATGCTCCCAACCGGCATAAG‑CCCCAGGGTATAGCTATCGATATTACCTTTGCCGCC > SRR4302543.1073491/1‑94 (MQ=60)
TCAACTTTCACCACCCCATCAACATAGGCACCGTTCTGATGCTCCCAACCGGCATAAG‑CCCCAGGGAATAGCTATCGATATTACCTTTGCCGAC > SRR4302543.1073490/1‑94 (MQ=60)
CAACTTTCACCACCCCATCAACATAGGCACCGTTCTGATGCTCCCAACCGGCATAAG‑CCCCAGGGTATAGCTATCGATATTACCTTTGCCGCCG > SRR4302543.4111013/1‑94 (MQ=60)
CTTTCACCACCCCATCAACATAGGCACCGTTCTGATGCTCCCAACCGGCATAAG‑CCCCAGGGTATAGCTATCGATATTACCTTTGCCGCCGCGA < SRR4302543.1204219/94‑1 (MQ=60)
TTCACCACCCCATCAACATAGGCACCGTTCTGATGCTCCCAACCGGCATAAG‑CCCCAGGGTATAGCTATCGATATTACCTTTGCCGCCGCGATC > SRR4302543.5470474/1‑94 (MQ=60)
CACCACCCCATCAACATAGGCACCGTTCTGATGCTCCCAACCGGCATAAG‑CCCCAGGGTATAGCTATCGATATTACCTTTGCCGCCGCGATCAA > SRR4302543.5656499/1‑94 (MQ=60)
CACCACCCCATCAACATAGGCACCGTTCTGATGCTCCCAACCGGCATAAG‑CCCCAGGGTATAGCTATCGATATTACCTTTGCCGCCGCGATCAA > SRR4302543.6198249/1‑94 (MQ=60)
CACCACCCCATCAACATAGGCACCGTTCTGATGCTCCCAACCGGCATAAG‑CCCCAGGGTATAGCTATCGATATTACCTTTGCCGCCGCGATCAA > SRR4302543.5189447/1‑94 (MQ=60)
CCACCCCATCAACATAGGCACCGTTTTGATGCTCCCAACCGGCATAAG‑CCCCAGGGTATAGCTATCGATATTACCTTTGCCGCCGCGATCAAAA > SRR4302543.469238/1‑94 (MQ=60)
CCACCCCATCAACATAGGCACCGTTCTGATGCTCCCAACCGGCATAAG‑CCCCAGGGTATAGCTATCGATATTACCTTTGCCGCCGCGATCAAAA < SRR4302543.618667/94‑1 (MQ=60)
CCACCCCATCAACATAGGCACCGTTCTGATGCTCCCAACCGGCATAAG‑CCCCAGGGTATAGCTATCGATATTACCTTTGCCGCCGCGATCAAAA < SRR4302543.1299533/94‑1 (MQ=60)
CACCCCATCAACATAGGCACCGTTCTGATGCTCCCAACCGGCATAAG‑CCCCAGGGTATAGCTATCGATATTACCTTTGCCGCCGCGATCAAAAC < SRR4302543.1089462/94‑1 (MQ=60)
CACCCCATCAACATAGGCACCATTCTGATGCTCCCATCCGGCATAAG‑CCCCAGGGTATAGCTATCGATATTACCTTTGCCGCCGCCATCAAAAC < SRR4302543.5978702/94‑1 (MQ=60)
ACCCCATCAACATAGGCACCGTTCTGATGCTCCCAACCGGCATAAG‑CCCCAGGGTATAGCTATCGATATTACCTTTGCCGCCGCGATCAAAACC > SRR4302543.6122142/1‑94 (MQ=60)
ACCCCATCAACATAGGCACCGTTCTGATGCTCCCAACCGGCATAAG‑CCCCAGGGTATAGCTATCGATATTACCTTTGCCGCCGCGATCAAAACC > SRR4302543.2826054/1‑94 (MQ=60)
CCCCATCAACATAGGCACCGTTCTGATGCTCCCAACCGGCCTAAG‑CCCCAGGGTATAGCTATCGATATTACCTTTGCCGCCGCGATCAAAACCA > SRR4302543.823891/1‑94 (MQ=60)
CCCCATCAACATAGGCACCGTTCTGATGCTCCCAACCGGCATAAG‑CCCCAGGGTATAGCTATCGATATTACCTTTGCCGCCGCGATCAAAACCA > SRR4302543.7873957/1‑94 (MQ=60)
CCCCATCAACATAGGCACCGTTCTGATGCTCCCAACCGGCATAAG‑CCCCAGGGTATAGCTATCGATATTACCTTTGCCGCCGCGATCAAAACCA > SRR4302543.6653830/1‑94 (MQ=60)
CCCATCAACATAGGCACCGTTCTGATGCTCCCAACCGGCATAAG‑CCCCAGGGTATAGCTATCGATATTACCTTTGCCGCCGCGATCAACACCAA > SRR4302543.350413/1‑94 (MQ=60)
CCCATCAACATAGGCACCGTTCTGATGCTCCCAACCGGCATAAG‑CCCCAGGGTATAGCTATCGATATTACCTTTGCCGCCGCGATCAAAACCAA < SRR4302543.1033141/94‑1 (MQ=60)
CATCAACATAGGCACCGTTCTGATGCTCCCAACCGGCATAAG‑CCCCAGGGTATAGCTATCGATATTACCTTTGCCGCCGCGATCAAAACCAATA > SRR4302543.1497755/1‑94 (MQ=60)
ATCAACATAGGCACCGTTCTGATGCTCCCAACCGGCATAAG‑CCCCAGGGTATAGCTATCGATATTACCTTTGCCGCCGCGATCAAAACCAATAT < SRR4302543.1069430/94‑1 (MQ=60)
TCAACATAGGCACCGTTCTGATGCTCCCAACCGGCATAAG‑CCCCAGGGTATAGCTATCGATATTACCTTTGCCGCCGCGATCAAAACCAATATC < SRR4302543.1078778/94‑1 (MQ=60)
CAACATAGGCACCGTTCTGATGCTCCCAACCGGCATAAG‑CCCCAGGGTATAGCTATCGATATTACCTTTGCCGCCGCGATCAAAACCAATATCA > SRR4302543.7030221/1‑94 (MQ=60)
AACATAGGCACCGTTCTGATGCTCCCAACCGGCATAAG‑CCCCAGGGTATAGCTATCGATATTACCTTTGCCGCCGCGATCAAAACCAATATCAG < SRR4302543.7100839/94‑1 (MQ=60)
AACATAGGCACCGTTCTGATGCTCCCAACCGGCATAAG‑CCCCAGGGTATAGCTATCGATATTACCTTTGCCGCCGCGATCAAAACCAATATCAG < SRR4302543.191400/94‑1 (MQ=60)
ACATAGGCACCGTTCTGATGCTCCCAACCGGCATAAG‑CCCCAGGGTATAGCTATCGATATTACCTTTGCCGCCGCGATCAAAACCAATATCAGA > SRR4302543.7256471/1‑94 (MQ=60)
CATAGGCACCGTTCTGATGCTCCCAACCGGCATAAG‑CCCCAGGGTATAGCTATCGATATTACCTTTGCCGCCGCGATCAAAACCAATATCAGAA > SRR4302543.5166079/1‑94 (MQ=60)
CATAGGCACCGTTCTGATGCTCCCAACCGGCATAAG‑CCCCAGGGTATAGCTATCGATATTACCTTTGCCGCCGCGATCAAAACCAATATCAGAA > SRR4302543.1916241/1‑94 (MQ=60)
CATAGGCACCGTTCTGATGCTCCCAACCGGCATAAG‑CCCCAGGGTATAGCTATCGATATTACCTTTGCCGCCGCGATCAAAACCAATATCAGAA > SRR4302543.7302078/1‑94 (MQ=60)
ATAGGCACCGTTCTGATGCTCCCAACCGGCATAAG‑CCCCAGGGTATAGCTATCGATATTACCTTTGCCGCCGCGATCAAAACCAATATCAGAAT < SRR4302543.6643433/94‑1 (MQ=60)
ATAGGCACCGTTCTGATGCTCCCAACCGGCATAAG‑CCCCAGGGTATAGCTATCGATATTACCTTTGCCGCCGCGATCAAAACCAATATCAGAAT > SRR4302543.3850272/1‑94 (MQ=60)
AGGCACCGTTCTGATGCTCCCAACCGGCATAAG‑CCCCAGGGTATAGCTATCGATATTACCTTTGCCGCCGCGATCAAAACCAATATCAGAATGA < SRR4302543.3742588/94‑1 (MQ=60)
GGCACCGTTCTGATGCTCCCAACCGGCATAAG‑CCCCAGGGTATAGCTATCGATATTACCTTTGCCGCCGCGATCAAAACCAATATCAGAATGAG > SRR4302543.3553037/1‑94 (MQ=60)
GGCACCGTTCTGATGCTCCCAACCGGCATAAG‑CCCCAGGGTATAGCTATCGATATTACCTTTGCCGCCGCGATCAAAACCAATATCAGAATGAG < SRR4302543.7946997/94‑1 (MQ=60)
CACCGTTCTGATGCTCCCAACCGGCATAAG‑CCCCAGGGTATAGCTATCGATATTACCTTTGCCGCCGCGATCAAAACCAATATCAGAATGAGAG < SRR4302543.2078439/94‑1 (MQ=60)
CACCGTTCTGATGCTCCCAACCGGCATAAG‑CCCCAGGGTATAGCTATCGATATTACCTTTGCCGCCGCGATCAAAACCAATATCAGAATGAGAG < SRR4302543.5761421/94‑1 (MQ=60)
CCCGTTCTGATGCTCCCAACCGGCATAAG‑CCCCAGGGTATAGCTATCGATATTACCTTTGCCGCCGCGATCAAAACCAATATCAGAATGAGAGT < SRR4302543.1524907/94‑1 (MQ=60)
TTCTGATGCTCCCAACCGGCATAAG‑CCCCAGGGTATAGCTATCGATATTACCTTTGCCGCCGCGATCAAAACCAATATCAGAATGAGAGTAACC < SRR4302543.5780983/94‑1 (MQ=60)
TTCTGATGCTCCCAACCGGCATAAG‑CCCCAGGGTATAGCTATCGATATTACCTTTGCCGCCGCGATCAAAACCAATATCAGAATGAGAGTAACC < SRR4302543.765279/94‑1 (MQ=60)
TTCTGATGCTCCCAACCGGCATAAG‑CCCCAGGGTATAGCTATCGATATTACCTTTGCCGCCGCGATCAAAACCAATATCAGAATGAGAGTAACC < SRR4302543.3461732/94‑1 (MQ=60)
TCTGATGCTCCCAACCGGCATAAG‑CCCCAGGGTATAGCTATCGATATTACCTTTGCCGCCGCGATCAAAACCAATATCAGAATGAGAGTAACCA < SRR4302543.4109645/94‑1 (MQ=60)
CTGATGCTCCCAACCGGCATAAG‑CCCCAGGGTATAGCTATCGATATTACCTTTGCCGCCGCGATCAAAACCAATATCAGAATGAGAGTAACCAA > SRR4302543.7590824/1‑94 (MQ=60)
GATGCTCCCAACCGGCATAAG‑CCCCAGGGTATAGCTATCGATATTACCTTTGCCGCCGCGATCAAAACCAATATCAGAATGAGAGTAACCAAAG > SRR4302543.7635311/1‑94 (MQ=60)
GATGCTCCCAACCGGCATAAG‑CCCCAGGGTATAGCTATCGATATTACCTTTGCCGCCGCGATCAAAACCAATATCAGAATGAGAGTAACCAAAG < SRR4302543.7551650/94‑1 (MQ=60)
GATGCTCCCAACCGGCATAAG‑CCCCAGGGTATAGCTATCGATATTACCTTTGCCGCCGCGATCAAAACCAATATCAGAATGAGAGTAACCAAAG < SRR4302543.7551649/94‑1 (MQ=60)
ATGCTCCCAACCGGCATAAG‑CCCCAGGGTATAGCTATCGATATTACCTTTGCCGCCGCGATCAAAACCAATATCAGAATGAGAGTAACCAAAGA < SRR4302543.1004427/94‑1 (MQ=60)
ATGCTCCCAACCGGCATAAG‑CCCCAGGGTATAGCTATCGATATTACCTTTGCCGCCGCGATCAAAACCAATATCAGAATGAGAGTAACCAAAGA < SRR4302543.7670926/94‑1 (MQ=60)
ATGCTCCCAACCGGCATAAG‑CCCCAGGGTATAGCTATCGATATTACCTTTGCCGCCGCGATCAAAACCAATATCAGAATGAGAGTAACCAAAGA < SRR4302543.6929677/94‑1 (MQ=60)
ATGCTCCCAACCGGCATAAG‑CCCCAGGGTATAGCTATCGATATTACCTTTGCCGCCGCGATCAAAACCAATATCAGAATGAGAGTAACCAAAGA > SRR4302543.6081936/1‑94 (MQ=60)
ATGCTCCCAACCGGCATAAG‑CCCCAGGGTATAGCTATCGATATTACCTTTGCCGCCGCGATCAAAACCAATATCAGAATGAGAGTAACCAAAGA > SRR4302543.2340667/1‑94 (MQ=60)
ATGCTCCCAACCGGCATAAG‑CCCCAGGGTATAGCTATCGATATTACCTTTGCCGCCGCGATCAAAACCAATATCAGAATGAGAGTAACCAAAGA > SRR4302543.6081937/1‑94 (MQ=60)
ATGCTCCCAACCGGCATAA‑TCCCCAGGGTATAGCTATCGATATTACCTTTGCCGCCGCGATCAAAACCAATATCAGAATGAGAGTAACCAAAGA < SRR4302543.7832787/94‑1 (MQ=60)
TGCTCCCAACCGGCATAAG‑CCCCAGGGTATAGCTATCGATATTACCTTTGCCGCCGCGATCAAAACCAATATCAGAATGAGAGTAACCAAAGAT < SRR4302543.6335740/94‑1 (MQ=60)
GCTCCCAACCGGCATAAG‑CCCCAGTGTATAGCTATCGATATTACCTTTGCCGCCGCGATCAAAACCAATATCAGAATGAGAGTAACCAAAGATC < SRR4302543.2579593/94‑1 (MQ=60)
ccaCAACCGGCATAAG‑CCCCAGGGTATAGCTATCGATATTACCTTTGCCGCCGCGATCAAAACCAATATCAGAATGAGAGTAACCAAAGATCAA < SRR4302543.3060625/91‑1 (MQ=60)
CCCAACCGGCATAAG‑CCCCAGGGTATAGCTATCGATATTACCTTTGCCGCCGCGATCAAAACCAATATCAGAATGAGAGTAACCAAAGATCAAG > SRR4302543.5865777/1‑94 (MQ=60)
CCAACCGGCATAAG‑CCCCAGGGTATAGCTATCGATATTACCTTTGCCGCCGCGATCAAAACCAATATCAGAATGAGAGTAACCAAAGATCAAGC < SRR4302543.2891548/94‑1 (MQ=60)
AACCGGCATAAG‑CCCCAGGGTATAGCTATCGATATTACCTTTGCCGCCGCGATCAAAACCAATATCAGAATGAGAGTAACCAAAGATCAAGCCG < SRR4302543.3619976/94‑1 (MQ=60)
AACCGGCATAAG‑CCCCAGGGTATAGCTATCGATATTACCTTTGCCGCCGCGATCAAAACCAATATCAGAATGAGAGTAACCAAAGATCAAGCCG < SRR4302543.3049749/94‑1 (MQ=60)
AACCGGCATAAG‑CCCCAGGGTATAGCTATCGATATTACCTTTGCCGCCGCGATCAAAACCAATATCAGAATGAGAGTAACCAAAGATCAAGCCG < SRR4302543.3356198/94‑1 (MQ=60)
AACCGGCATAAG‑CCCCAGGGTATAGCTATCGATATTACCTTTGCCGCCGCGATCAAAACCAATATCAGAATGAGAGTAACCAAAGATCAAGCCG < SRR4302543.2036897/94‑1 (MQ=60)
AACCGGCATAAG‑CCCCAGGGTATAGCTATCGATATTACCTTTGCCGCCGCGATCAAAACCAATATCAGAATGAGAGTAACCAAAGATCAAGCCG < SRR4302543.2882098/94‑1 (MQ=60)
CCGGCATAAG‑CCCCAGGGTATAGCTATCGATATTACCTTTGCCGCCGCGATCAAAACCAATATCAGAATGAGAGTAACCAAAGATCAAGCCGCG < SRR4302543.626841/94‑1 (MQ=60)
CCGGCATAAG‑CCCCAGGGTATAGCTATCGATATTACCTTTGCCGCCGCGATCAAAACCAATATCAGAATGAGAGTAACCAAAGATCAAGCCGCG < SRR4302543.6301802/94‑1 (MQ=60)
CCGGCATAAG‑CCCCAGGGTATAGCTATCGATATTACCTTTGCCGCCGCGATCAAAACCAATATCAGAATGAGAGTAACCAAAGATCAAGCCGCG > SRR4302543.6444760/1‑94 (MQ=60)
CGGCATAAG‑CCCCAGGGTATAGCTATCGATATTACCTTTGCCGCCGCGATCAAAACCAATATCAGAATGAGAGTAACCAAAGATCAAGCCGCGA < SRR4302543.6485163/94‑1 (MQ=60)
GGCATAAG‑CCCCAGGGTATAGCTATCGATATTACCTTTGCCGCCGCGCTCCAAACCACTATCAGAATGAGAGTAAacaaaaatcacccccggat > SRR4302543.4547460/1‑75 (MQ=60)
GCATAAG‑CCCCAGGGTATAGCTATCGATATTACCTTTGCCGCCGCGATCAAAACCAATATCAGAATGAGAGTAACCAAAGATCAAGCCGCGAAT < SRR4302543.3330813/94‑1 (MQ=60)
CATAAG‑CCCCAGGGTATAGCTATCGATATTACCTTTGCCGCCGCGATCAAAACCAATATCAGAATGAGAGTAACCAAAGATCAAGCCGCGAATT > SRR4302543.7220773/1‑94 (MQ=60)
ATAAG‑CCCCAGGGTATAGCTATCGATATTACCTTTGCCGCCGCGATCAAAACCAATATCAGAATGAGAGTAACCAAAGATCAAGCCGCGAATTG > SRR4302543.422615/1‑94 (MQ=60)
ATAAG‑CCCCAGGGTATAGCTATCGATATTACCTTTGCCGCCGCGATCAAAACCAATATCAGAATGAGAGTAACCAAAGATCAAGCCGCGAATTG < SRR4302543.1071429/94‑1 (MQ=60)
TAAG‑CCCCAGGGTATAGCTATCGATATTACCTTTGCCGCCGCGATCAAAACCAATATCAGAATGAGAGTAACCAAAGATCAAGCCGCGAATTGT > SRR4302543.4907983/1‑94 (MQ=60)
TAAG‑CCCCAGGGTATAGCTATCGATATTACCTTTGCCGCCGCGATCAAAACCAATATCAGAATGAGAGTAACCAAAGATCAAGCCGCGAATTGT < SRR4302543.3370369/94‑1 (MQ=60)
AAG‑CCCCAGGGTATAGCTATCGATATTACCTTTGCCGCCGCGATCAAAACCAATATCAGAATGAGAGTAACCAAAGATCAAGCCGCGAATTGTA < SRR4302543.734970/94‑1 (MQ=60)
GCCCCAGGGTATAGCTATCGATATTACCTTTGCCGCCGCGATCAAAACCAATATCAGAATGAGAGTAACCAAAGATCAAGCCGCGAATTGTACT < SRR4302543.4010141/94‑1 (MQ=60)
GCCCCAGGGTATAGCTATCGATATTACCTTTGCCGCCGCGATCAAAACCAATATCAGAATGAGAGTAACCAAAGATCAAGCCGCGAATTGTACT < SRR4302543.1933130/94‑1 (MQ=60)
CCCCAGGGTATAGCTATCGATATTACCTTTGCCGCCGCGATCAAAACCAATATCAGAATGAGAGTAACCAAAGATCAAGCCGCGAATTGTACTG > SRR4302543.1294652/1‑94 (MQ=60)
CCCCAGGGTATAGCTATCGATATTACCTTTGCCGCCGCGATCAAAACCAATATCAGAATGAGAGTAACCAAAGATCAAGCCGCGAATTGTACTG > SRR4302543.1563160/1‑94 (MQ=60)
CCCAGGGTATAGCTATCGATATTACCTTTGCCGCCGCGATCAAAACCAATATCAGAATGAGAGTAACCAAAGATCAAGCCGCGAATTGTACTGC < SRR4302543.3285340/94‑1 (MQ=60)
CCAGGGTATAGCTATCGATATTACCTTTGCCGCCGCGATCAAAACCAATATCAGAATGAGAGTAACCAAAGATCAAGCCGCGAATTGTACTGCT < SRR4302543.7014119/94‑1 (MQ=60)
CAGGGTATAGCTATCGATATTACCTTTGCCGCCGCGATCAAAACCAATATCAGAATGAGAGTAACCAAAGATCAAGCCGCGAATTGTACTGCTT < SRR4302543.2954496/94‑1 (MQ=60)
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TTGCCATGGATGGTGTTGGCAAAACGGTCAACTTTCACCACCCCATCAACATAGGCACCGTTCTGATGCTCCCAACCGGCATAAGCCCCCAGGGTATAGCTATCGATATTACCTTTGCCGCCGCGATCAAAACCAATATCAGAATGAGAGTAACCAAAGATCAAGCCGCGAATTGTACTGCTT > NC_000913/2284900‑2285082
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| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 7 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
