Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I1 R1
|
1696 |
279.3 |
15874187 |
97.8% |
15524954 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
2,293,202 |
T→C |
M67V (ATG→GTG) |
ccmE ← |
cytochrome c biogenesis |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 2,293,202 | 0 | T | C | 100.0%
| 680.1
/ NA
| 219 | M67V (ATG→GTG) | ccmE | cytochrome c biogenesis |
| Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (119/100); total (119/100) |
Only 100 of 235 total aligned reads displayed.
CTTCGTAAGAGACATCCACTGAGCCTTCAGCATCGTAAATGGTGAAGGTCACTTTCAGCGAATTGGGATCGCGCTGCACACTACCCGGCATCACCATCCCGCCAACGCGCAGACGCTGACCGACTTCCGGCATTTGCTGAGTTTCACGCTTGCCGTAGAGAATTTCCCCCGGCGTATAAA > NC_000913/2293112‑2293291
|
cTTCGTAAGAGACATCCACTGAGCCTTCAGCATCGTAAATGGTGAAGGTCACTTTCAGCGAATTGGGATCGCGCTGCACACTACCCGGCACCa > 2:2519627/1‑93 (MQ=255)
cTTCGTAAGAGACATCCACTGAGCCTTCAGCATCGTAAATGGTGAAGGTCACTTTCAGCGAATTGGGATCGCGCTGCACACTACCCGGCACCa > 2:3733075/1‑93 (MQ=255)
cTTCGTAAGAGACATCCACTGAGCCTTCAGCATCGTAAATGGTGAAGGTCACTTTCAGCGAATTGGGATCGCGCTGCACACTACCCGGCACCa < 1:6618103/93‑1 (MQ=255)
cTTCGTAAGAGACATCCACTGAGCCTTCAGCATCGTAAATGGTGAAGGTCACTTTCAGCGAATTGGGATCGCGCTGCACACTACCCGGCACCa < 1:3642430/93‑1 (MQ=255)
ttCGTAAGAGACATCCACTGAGCCTTCAGCATCGTAAATGGTGAAGGTCACTTTCAGCGAATTGGGATCGCGCTGCACACTACCCGGcaccac < 1:1870066/93‑1 (MQ=255)
tCGTAAGAGACATCCACTGAGCCTTCAGCATCGTAAATGGTGAAGGTCACTTTCAGCGAATTGGGATCGCGCTGCACACTACCCCGCaccacc > 2:467468/1‑93 (MQ=255)
tAAGAGACATCCACTGAGCCTTCAGCATCGTAAATGGTGAAGGTCACTTTCAGCGAATTGGGATCGCGCTGCACACTACCCGGCACCACCATc < 1:6637617/93‑1 (MQ=255)
agagACATCCACTGAGCCTTCAGCATCGTAAATGGTGAAGGTCACTTTCAGCGAATTGGGATCGCGCTGCACACTACCCGGCACCACCATccc < 1:1073525/93‑1 (MQ=255)
agagACATCCACTGAGCCTTCAGCATCGTAAATGGTGAAGGTCACTTTCAGCGAATTGGGATCGCGCTGCACACTACCCGGCACCACCATccc > 1:884251/1‑93 (MQ=255)
agagACATCCACTGAGCCTTCAGCATCGTAAATGGTGAAGGTCACTTTCAGCGAATTGGGATCGCGCTGCACACTACCCGGCACCACCATccc > 2:6212749/1‑93 (MQ=255)
agaCATCCACTGAGCCTTCAGCATCGTAAATGGTGAAGGTCACTTTCAGCGAATTGGGATCGCGCTGCACACTACCCGGCACCACCATCCCGc > 2:5528937/1‑93 (MQ=255)
agaCATCCACTGAGCCTTCAGCATCGTAAATGGTGAAGGTCACTTTCAGCGAATTGGGATCGCGCTGCACACTACCCGGCACCACCATCCCGc < 1:4794094/93‑1 (MQ=255)
cATCCACTGAGCCTTCAGCATCGTAAATGGTGAAGGTCACTTTCAGCGAATTGGGATCGCGCTGCACACTACCCGGCACCACCATCCCGCCaa > 2:2739085/1‑93 (MQ=255)
cATCCACTGAGCCTTCAGCATCGTAAATGGTGAAGGTCACTTTCAGCGAATTGGGATCGCGCTGCACACTACCCGGCACCACCATCCCGCCaa > 1:4990189/1‑93 (MQ=255)
aTCCACTGAGCCTTCAGCATCGTAAATGGTGAAGGTCACTTTCAGCGAATTGGGATCGCGCTGCACACTACCCGGCACCACCATCCCGCCAAc > 2:7476597/1‑93 (MQ=255)
aTCCACTGAGCCTTCAGCATCGTAAATGGTGAAGGTCACTTTCAGCGAATTGGGATCGCGCTGCACACTACCCGGCACCACCATCCCGCCAAc < 2:6465378/93‑1 (MQ=255)
ccACTGAGCCTTCAGCATCGTAAATGGTGAAGGTCACTTTCAGCGAATTGGGATCGCGCTGCACACTACCCGGCACCACCATCCCGCCAAcgc > 2:6099404/1‑93 (MQ=255)
cACTGAGCCTTCAGCATCGTAAATGGTGAAGGTCACTTTCAGCGAATTGGGATCGCGCTGCACACTACCCGGCACCACCATCCCGCCAAcgcg > 1:4425826/1‑93 (MQ=255)
aCTGAGCCTTCAGCATCGTAAATGGTGAAGGTCACTTTCAGCGAATTGGGATCGCGCTGCACACTACCCGGCACCACCATCCCGCCAACgcgc < 1:5379246/93‑1 (MQ=255)
cTGAGCCTTCAGCATCGTAAATGGTGAAGGTCACTTTCAGCGAATTGGGATCGCGCTGCACCCTACCCGGAACCACCATCCCGCCAACGCGCa > 1:2318918/1‑93 (MQ=255)
cTGAGCCTTCAGCATCGTAAATGGTGAAGGTCACTTTCAGCGAATTGGGATCGCGCTGCACACTACCCGGCACCACCATCCCGCCAACGCGCa < 2:4839467/93‑1 (MQ=255)
tGAGCCTTCAGCATCGTAAATGGTGAAGGTCACTTTCAGCGAATTGGGATCGCGCTGCACACTACCCGGCACCACCATCCCGCCAACGCGCAg > 1:481456/1‑93 (MQ=255)
gAGCCTTCAGCATCGTAAATGGTGAAGGTCACTTTCAGCGAATTGGGATCGCGCTGCACACTACCCGGCACCACCATCCCGCCAACGCGCAGa < 1:7801938/93‑1 (MQ=255)
gAGCCTTCAGCATCGTAAATGGTGAAGGTCACTTTCAGCGAATTGGGATCGCGCTGCACACTACCCGGCACCACCATCCCGCCAACGCGCAGa > 1:868229/1‑93 (MQ=255)
aGCCTTCAGCATCGTAAATGGTGAAGGTCACTTTCAGCGAATTGGGATCGCGCTGCACACTACCCGGCACCACCATCCCGCCAACGCGCAGAc < 2:1562845/93‑1 (MQ=255)
gCCTTCAGCATCGTAAATGGTGAAGGTCACTTTCAGCGAATTGGGATCGCGCTGCACACTACCCGGCACCACCATCCCGCCAACGCGCAGACg > 1:4497575/1‑93 (MQ=255)
ccTTTAGCATCGTAAATGGTGAAGGTCACTTTCAGCGAATTGGGATCGCGCTGCACACTCCCCGGCACCGCCATCCCGCCAACGCGCAGACGc < 2:4148679/93‑1 (MQ=255)
ccTTCAGCATCGTAAATGGTGAAGGTCACTTTCAGCGAATTGGGATCGCGCTGCACACTACCCGGCACCACCATCCCGCCAACGCGCAGACGc < 1:5338202/93‑1 (MQ=255)
ttCAGCATCGTAAATGGTGAAGGTCACTTTCAGCGAATTGGGATCGCGCTGCACACTACCCGGCACCACCATCCCGCCAACGCGCAGACGCTg > 1:3280324/1‑93 (MQ=255)
ttCAGCATCGTAAATGGTGAAGGTCACTTTCAGCGAATTGGGATCGCGCTGCACACTACCCGGCACCACCATCCCGCCAACGCGCAGACGCTg > 2:64948/1‑93 (MQ=255)
ttCAGCATCGTAAATGGTGAAGGTCACTTTCAGCGAATTGGGATCGCGCTGCACACTACCCGGCACCACCATCCCGCCAACGCGCAGACGCTg > 2:4903592/1‑93 (MQ=255)
ttCAGCATCGTAAATGGTGAAGGTCACTTTCAGCGAATTGGGATCGCGCTGCACACTACCCGGCACCACCATCCCGCCAACGCGCAGACGCTg > 1:597014/1‑93 (MQ=255)
ttCAGCATCGTAAATGGTGAAGGTCACTTTCAGCGAATTGGGATCGCGCTGCACACTACCCGGCACCACCATCCCGCCAACGCGCAGACGCTg > 2:7156858/1‑93 (MQ=255)
ttCAGCATCGTAAATGGTGAAGGTCACTTTCAGCGAATTGGGATCGCGCTGCACACTACACGGCACCACCATCCCGCCAACGCGCAGACGCTg > 2:6638604/1‑93 (MQ=255)
gCATCGTAAATGGTGAAGGTCACTTTCAGCGAATTGGGATCGCGCTGCACACTACCCGGCACCACCATCCCGCCAACGCGCAGACGCTGACCg > 2:5718531/1‑93 (MQ=255)
gCATCGTAAATGGTGAAGGTCACTTTCAGCGAATTGGGATCGCGCTGCACACTACCCGGCACCACCATCCCGCCAACGCGCAGACGCTGACCg > 1:351777/1‑93 (MQ=255)
taTCGTAAATGGTGAAGGTCACTTTCAGCGAATTGGGATCGCGCTGCACACTACCCGGCACCACCATCCCGCCAACGCGCAGACGCTGACCGa > 1:6204485/2‑93 (MQ=255)
tCGTAAATGGTGAAGGTCACTTTCAGCGAATTGGGATCGCGCTGCACACTACCCGGCTCCACCATCCCGCCAACGCGCAGACGCTGACCGACt > 1:6935115/1‑93 (MQ=255)
tCGTAAATGGTGAAGGTCACTTTCAGCGAATTGGGATCGCGCTGCACACTACCCGGCACCACCATCCCGCCAACGCGCAGACGCTGACCGACt > 2:3411893/1‑93 (MQ=255)
tCGTAAATGGTGAAGGTCACTTTCAGCGAATTGGGATCGCGCTGCACACTACCCGGCACCACCATCCCGCCAACGCGCAGACGCTGACCGACt < 1:7115542/93‑1 (MQ=255)
tCGTAAATGGTGAAGGTCACTTTCAGCGAATTGGGATCGCGCTGCACACTACCCGGCACCACCATCCCGCCAACGCGCAGACGCTGACCGACt > 2:3779827/1‑93 (MQ=255)
cGTAAATGGTGAAGGTCACTTTCAGCGAATTGGGATCGCGCTGCACACTACCCGGCACCACCATCCCGCCAACGCGCAGACGCTGACCGACtt < 2:6364207/93‑1 (MQ=255)
cGTAAATGGTGAAGGTCACTTTCAGCGAATTGGGATCGCGCTGCACACTACCCGGCACCACCATCCCGCCAACGCGCAGACGCTGACCGACtt > 2:395503/1‑93 (MQ=255)
gTAAATGGTGAAGGTCACTTTCAGCGAATTGGGATCGCGCTGCACACTACCCGGCACCACCATCCCGCCAACGCGCAGACGCTGACCGACTTc < 1:4172517/93‑1 (MQ=255)
tAAATGGTGAAGGTCACTTTCAGCGAATTGGGATCGCGCTGCACACTACCCGGCACCACCATCCCGCCAACGCGCAGACGCTGACCGACTTcc > 1:1594062/1‑93 (MQ=255)
tAAATGGTGAAGGTCACTTTCAGCGAATTGGGATCGCGCTGCACACTACCCGGCACCACCATCCCGCCAACGCGCAGACGCTGACCGACTTcc > 2:4534150/1‑93 (MQ=255)
aaaTGGTGAAGGTCACTTTCAGCGAATTGGGATCGCGCTGCACACTACCCGGCACCACCATCCCGCCAACGCGCAGACGCTGACCGACTTCCg > 2:534773/1‑93 (MQ=255)
tGGTGAAGGTCACTTTCAGCGAATTGGGATCGCGCTGCACACTACCCGGCACCACCATCCCGCCAACGCGCAGACGCTGACCGACTTCCGGCa < 1:5302040/93‑1 (MQ=255)
tGAAGGTCACTTTCAGCGAATTGGGATCGCGCTGCACACTACCCGGCACCACCATCCCGCCAACGCGCAGACGCTGACCGACTTCCGGCAttt < 2:280340/93‑1 (MQ=255)
gAAGGTCACTTTCAGCGAATTGGGATCGCGCTGCACACTACCCGGCACCACCATCCCGCCAACGCGCAGACGCTGACCGACTTCCGGCATTTg > 1:2781477/1‑93 (MQ=255)
aaGGTCACTTTCAGCGAATTGGGATCGCGCTGCACACTACCCGGCACCACCATCCCGCCAACGCGCAGACGCTGACCGACTTCCGGCATTTGc > 1:4442898/1‑93 (MQ=255)
aGGTCACTTTCAGCGAATTGGGATCGCGCTGCACACTACCCGGCACCACCATCCCGCCAACGCGCAGACGCTGACCGACTTCCGGCATTTGCt > 1:120579/1‑93 (MQ=255)
ggTCACTTTCAGCGAATTGGGATCGCGCTGCACACTACCCGGCACCACCATCCCGCCAACGCGCAGACGCTGACCGACTTCCGGCATTTGCTg > 1:1621646/1‑93 (MQ=255)
gTCACTTTCAGCGAATTGGGATCGCGCTGCACACTACCCGGCACCACCATCCCGCCAACGCGCAGACGCTGACCGACTTCCGGCATTTGCTGa > 2:3098647/1‑93 (MQ=255)
cACTTTCAGCGAATTGGGATCGCGCTGGACACTACCCGGCACCACCATCCCGCCAACGCGCAGACGCTGACCGACTTCCGGCATTTGCTGAGt < 2:3713179/93‑1 (MQ=255)
aCTTTCAGCGAATTGGGATCGCGCTGCACACTACCCGGCACCACCATCCCGCCAACGCGCAGACGCTGACCGACTTCCGGCATTTGCTGAGtt > 2:1183142/1‑93 (MQ=255)
aCTTTCAGCGAATTGGGATCGCGCTGCACACTACCCGGCACCACCATCCCGCCAACGCGCAGACGCTGACCGACTTCCGGCATTTGCTGAGtt > 1:2304946/1‑93 (MQ=255)
cTTTCAGCGAATTGGGATCGCGCTGCACACTACCCGGCACCACCATCCCGCCAACGCGCAGACGCTGACCGACTTCCGGCATTTGCTGAGttt > 2:4345650/1‑93 (MQ=255)
tttCAGCGAATTGGGATCGCGCTGCACACTACCCGGCACCACCATCCCGCCAACGCGCAGACGCTGACCGACTTCCGGCATTTGCTGAGTTTc > 2:1855278/1‑93 (MQ=255)
ttCAGCGAATTGGGATCGCGCTGCACACTACCCGGCACCACCATCCCGCCAACGCGCAGACGCTGACCGACTTTCGGCATTTGCTGAGTTTCa > 1:3172364/1‑93 (MQ=255)
ttCAGCGAATTGGGATCGCGCTGCACACTACCCGGCACCACCATCCCGCCAACGCGCAGACGCTGACCGACTTCCGGCATTTGCTGAGTTTCa < 2:7455489/93‑1 (MQ=255)
ttCAGCGAATTGGGATCGCGCTGCACACTACCCGGCACCACCATCCCGCCAACGCGCAGACGCTGACCGACTTCCGGCATTTGCTGAGTTTCa > 2:7318138/1‑93 (MQ=255)
tCAGCGAATTGGGATCGCGCTGCACACTACCCGGCACCACCATCCCGCCAACGCGCAGACGCTGACCGACTTCCGGCATTTGCTGAGTTTCAc < 1:2488536/93‑1 (MQ=255)
cAGCGAATTGGGATCGCGCTGCACACTACCCGGCACCACCATCCCGCCAACGCGCAGACGCTGACCGACTTCCGGCATTTGCTGAGTTTCACg > 1:358366/1‑93 (MQ=255)
cAGCGAATTGGGATCGCGCTGCACACTACCCGGCACCACCATCCCGCCAACGCGCAGACGCTGACCGACTTCCGGCATTTGCTGAGTTTCACg > 1:7461333/1‑93 (MQ=255)
aGCGAATTGGGATGGCGCTGCATACTACCCGGCACCACCATCCCGCCAACGCGCAGACGCTGACCGACTTCCGGCATTTGCTGAGTTTCACGc < 2:7299430/93‑1 (MQ=255)
aGCGAATTGGGATCGCGCTGCACACTACCCGGCACCACCATCCCGCCAACGCGCAGACGCTGACCGACTTCCGGCATTTGCTGAGTTTCACGc > 1:4372364/1‑93 (MQ=255)
gCGAATTGGGATCGCGCTGCACACTACCCGGCACCACCATCCCGCCAACGCGCAGACGCTGAGCGACTTCCGGCATTTGCTGAGTTTCACGCt > 1:18222/1‑93 (MQ=255)
gCGAATTGGGATCGCGCTGCACACTACCCGGCACCACCATCCCGCCAACGCGCAGACGCTGACCGACTTCCGGCATTTGCTGAGTTTCACGCt > 1:5050253/1‑93 (MQ=255)
cGAATTGGGATCGCGCTGCACACTACCCGGCACCACCATCCCGCCAACGCGCAGACGCTGACCGACTTCCGGCATTTGCTGAGTTTCACGCtt < 1:1464002/93‑1 (MQ=255)
cGAATTGGGATCGCGCTGCACACTACCCGGCACCACCATCCCGCCAACGCGCAGACGCTGACCGACTTCCGGCATTTGCTGAGTTTCACGCtt < 1:2568741/93‑1 (MQ=255)
aaTTGGGATCGCGCTGCACACTACCCGGCACCACCATCCCGCCAACGCGCAGACGCTGACCGACTTCCGGCATTTGCTGTGTTTCACGCTTGc > 1:1420439/1‑93 (MQ=255)
aaTTGGGATCGCGCTGCACACTACCCGGCACCACCATCCCGCCAACGCGCAGACGCTGACCGACTTCCGGCATTTGCTGAGTTTCACGCTTGc < 2:1027360/93‑1 (MQ=255)
ttGGGATCGCGCTGCACACTACCCGGCACCACCATCCCGCCAACGCGCAGACGCTGACCGACTTCCGGCATTTGCTGAGTTTCACGCTTGCCg > 1:811992/1‑93 (MQ=255)
ttGGGATCGCGCTGCACACTACCCGGCACCACCATCCCGCCAACGCGCAGACGCTGACCGACTTCCGGCATTTGCTGAGTTTCACGCTTGCCg > 2:2037825/1‑93 (MQ=255)
gggATCGCGCTGCACACTACCCGGCACCACCATCCCGCCAACGCGCAGACGCTGACCGACTTCCGGCATTTGCTGAGTTTCACGCTTGCCGTa < 1:7692331/93‑1 (MQ=255)
ggATCGCGCTGCACACTACCCGGCACCACCATCCCGCCAACGCGCAGACGCTGACCGACTTCCGGCATTTGCTGAGTTTCACGCTTGCCGTag < 1:2463573/93‑1 (MQ=255)
gATCGCGCTGCACACTACCCGGCACCACCATCCCGCCAACGCGCAGACGCTGACCGACTTCCGGCATTTGCTGAGTTTCACGCTTGCCGTaga < 1:5749932/93‑1 (MQ=255)
aTCGCGCTGCACACTACCCGGCACCACCATCCCGCCAACGCGCAGACGCTGACCGACTTCCGGCATTTGCTGAGTTTCACGCTTGCCGTagag > 2:5994935/1‑93 (MQ=255)
cgcgCTGCACACTACCCGGCACCACCATCCCGCCAACGCGCAGACGCTGACCGACTTCCGGCATTTGCTGAGTTTCACGCTTGCCGTAGAGaa < 2:6906804/93‑1 (MQ=255)
cgcgCTGCACACTACCCGGCACCACCATCCCGCCAACGCGCAGACGCTGACCGACTTCCGGCATTTGCTGAGTTTCACGCTTGCCGTAGAGaa < 2:3040871/93‑1 (MQ=255)
gcgcTGCACACTACCCGGCACCACCATCCCGCCAACGCGCAGACGCTGACCGACTTCCGGCATTTGCTGAGTTTCACGCTTGCCGTAGAGAAt > 2:852476/1‑93 (MQ=255)
gcgcTGCACACTACCCGGCACCACCATCCCGCCAACGCGCAGACGCTGACCGACTTCCGGCATTTGCTGAGTTTCACGCTTGCCGTAGAGAAt < 2:3302309/93‑1 (MQ=255)
cgcTGCACACTACCCGGCACCACCATCCCGCCAACGCGCAGACGCTGACCGACTTCCGGCATTTGCTGAGTTTCACGCTTGCCGTAGAGAAtt > 2:5959103/1‑93 (MQ=255)
gcTGCACACTACCCGGCACCACCATCCCGCCAACGCGCAGACGCTGACCGACTTCCGGCATTTGCTGAGTTTCACGCTTGCCGTAGAGAAttt > 1:5569429/1‑93 (MQ=255)
tGCACACTACCCGGCACCACCATCCCGCCAACGCGCAGACGCTGACCGACTTCCGGCATTTGCTGAGTTTCACGCTTGCCGTAGAGAATTTcc > 2:807793/1‑93 (MQ=255)
tGCACACGTCCCGGATCCGCCATCCCGCAAACGCGCAGACGCTGACCGACTTCCGGCATTTGCTGATTTTCACGCTTGCCGTAGAGAATTTcc < 2:550720/93‑1 (MQ=255)
gCACACTACCCGGCACCACCATCCCGCCAACGCGCAGACGCTGACCGACTTCCGGCATTTGCTGAGTTTCACGCTTGCCGTAGAGAATTTccc < 1:7570529/93‑1 (MQ=255)
cacaCTACCCGGCACCACCATCCCGCCAACGCGCAGACGCTGACCGACTTCCGGCATTTGCTGAGTTTCACGCTTGCCGTAGAGAATTTcccc < 2:3560302/93‑1 (MQ=255)
cacaCTACCCGGCACCACCATCCCGCCAACGCGCAGACGCTGACCGACTTCCGGCATTTGCTGAGTTTCACGCTTGCCGTAGAGAATTTcccc > 1:6901499/1‑93 (MQ=255)
cacaCTACCCGGCACCACCATCCCGCCAACGCGCAGACGCTGACCGACTTCCGGCATTTGCTGAGTTTCACGCTTGCCGTAGAGAATTTcccc < 2:7716309/93‑1 (MQ=255)
acTACCCGGCACCACCATCCCGCCAACGCGCAGACGCTGACCGACTTCCGGCATTTGCTGAGTTTCACGCTTGCCGTAGAGAATTTCCCCCgg < 1:3860950/93‑1 (MQ=255)
acTACCCGGCACCACCATCCCGCCAACGCGCAGACGCTGACCGACTTCCGGCATTTGCTGAGTTTCACGCTTGCCGTAGAGAATTTCCCCCgg > 2:1302369/1‑93 (MQ=255)
aCCCGGCACCACCATCCCGCCAACGCGCAGACGCTGACCGACTTCCGGCACTTGCTGAGTTTCACGCTTGCCGTAGAGAATTTCCCCcgtcgt < 2:7747403/93‑1 (MQ=255)
cccGGCACCACCATCCCGCCAACGCGCAGACGCTGACCGACTTCCGGCATTTGCTGAGTTTCACGCTTGCCGTAGAGAATTTCCCCCGGCGta < 1:1311781/93‑1 (MQ=255)
ccGGCACCACCATCCCGCCAACGCGCAGACGCTGACCGACTTCCGGCATTTGCTGAGTTTCACGCTTGCCGTAGAGAATTTCCCCCGGCGtat > 1:6340321/1‑93 (MQ=255)
cGGCACCACCATCCCGCCAACGCGCAGACGCTGACCGACTTCCGGCATTTGCTGAGTTTCACGCTTGCCGTAGAGAATTTCCCCCGGCGtata < 1:7296950/93‑1 (MQ=255)
ggCACCACCATCCCGCCAACGCGCAGACGCTGACCGACTTCCGGCATTTGCTGAGTTTCACGCTTGCCGTAGAGAATTTCCCCCGGCGTATaa < 2:4407013/93‑1 (MQ=255)
ggCACCACCATCCCGCCAACGCGCAGACGCTGACCGACTTCCGGCATTTGCTGAGTTTCACGCTTGCCGTAGAGAATTTCCCCCGGCGTATaa > 1:7920416/1‑93 (MQ=255)
gCACCACCATCCCGCCAACGCGCAGACGCTGACCGACTTCCGGCATTTGCTGAGTTTCACGCTTGCCGTAGAGAATTTCCCCCGGCGTATaaa < 2:4255217/93‑1 (MQ=255)
|
CTTCGTAAGAGACATCCACTGAGCCTTCAGCATCGTAAATGGTGAAGGTCACTTTCAGCGAATTGGGATCGCGCTGCACACTACCCGGCATCACCATCCCGCCAACGCGCAGACGCTGACCGACTTCCGGCATTTGCTGAGTTTCACGCTTGCCGTAGAGAATTTCCCCCGGCGTATAAA > NC_000913/2293112‑2293291
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 18 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
GCCTTCGTAAGAGACATCCACTGAGCCTTCAGCATCGTAAATGGTGAAGGTCACTTTCAGCGAATTGGGATCGCGCTGCACACTACCCGGCATCACCATCCCGCCAACGCGCAGACGCTGACCGACTTCCGGCATTTGCTGAGTTTCACGCTTGCCGTAGAGAATTTCCCCCGGCGTATAAAAGAG > NC_000913/2293110‑2293295
|
GCCTTCGTAAGAGACATCCACTGAGCCTTCAGCATCGTAAATGGTGAAGGTCACTTTCAGTGAATTGGGATCGCGCTGCACACTACTCGGCACC < SRR4302543.767529/94‑1 (MQ=60)
CCTTCGTAAGAGACATCCACTGAGCCTTCAGCATCGTAAATGGTGAAGGTCACTTTCAGCGAATTGGGATCGCGCTGCACACTACCCGGCACCA < SRR4302543.1623446/94‑1 (MQ=60)
CTTCGTAAGAGACATCCACTGAGCCTTCAGCATCGTAAATGGTGAAGGTCACTTTCAGCGAATTGGGATCGCGCTGCACACTACCCGGCACCAC < SRR4302543.3674469/94‑1 (MQ=60)
CTTCGTAAGAGACATCCACTGAGCCTTCAGCATCGTAAATGGTGAAGGTCACTTTCAGCGAATTGGGATCGCGCTGCACACTACCCGGCACCAC < SRR4302543.6680507/94‑1 (MQ=60)
TTCGTAAGAGACATCCACTGAGCCTTCAGCATCGTAAATGGTGAAGGTCACTTTCAGCGAATTGGGATCGCGCTGCACACTACCCGGCACCACC < SRR4302543.1886868/94‑1 (MQ=60)
TCGTAAGAGAAATCCACTGAGCCTTCAGCATCGTAAATGGTGAAGGTCACTTTCAGCGAATTGGGATCGCGCTGCACACTACCCGGCACCACCA > SRR4302543.1151546/1‑94 (MQ=60)
GTAAGAGACATCCACTGAGCCTTCAGCATCGTAAATGGTGAAGGTCACTTTCAGCGAATTGGGATCGCGCTGCACACTACCCGGCACCACCATC < SRR4302543.1595666/94‑1 (MQ=60)
TAAGAGACATCCACTGAGCCTTCAGCATCGTAAATGGTGAAGGTCACTTTCAGCGAATTGGGATCGCGCTGCACACTACCCGGCACCACCATCC < SRR4302543.6700249/94‑1 (MQ=60)
TAAGAGACATCCACTGAGCCTTCAGCATCGTAAATGGTGAAGGTCACTTTCAGCGAATTGGGATCGCGCTGCACACTACCCGGCACCACCATCC < SRR4302543.6700248/94‑1 (MQ=60)
TAAGAGACATCCACTGAGCCTTCAGCATCGTAAATGGTGAAGGTCACTTTCAGCGAATTGGGATCGCGCTGCACACTACCCGGCACCACCATCC > SRR4302543.6637593/1‑94 (MQ=60)
TAAGAGACATCCACTGAGCCTTCAGCATCGTAAATGGTGAAGGTCACTTTCAGCGAATTGGGATCGCGCTGCACACTACCCGGCACCACCATCC < SRR4302543.6216408/94‑1 (MQ=60)
AAGAGACATCCACTGAGCCTTCAGCATCGTAAATGGTGAAGGTCACTTTCAGCGAATTGGGATCGCGCTGCACACTACCCGGCACCACCATCCC > SRR4302543.892088/1‑94 (MQ=60)
AGAGACATCCACTGAGCCTTCAGCATCGTAAATGGTGAAGGTCACTTTCAGCGAATTGGGATCGCGCTGCACACTACCCGGCACCACCATCCCG < SRR4302543.5178787/94‑1 (MQ=60)
AGAGACATCCACTGAGCCTTCAGCATCGTAAATGGTGAAGGTCACTTTCAGCGAATTGGGATCGCGCTGCACACTACCCGGCACCACCATCCCG < SRR4302543.1083174/94‑1 (MQ=60)
AGAGACATCCACTGAGCCTTCAGCATCGTAAATGGTGAAGGTCACTTTCAGCGAATTGGGATCGCGCTGCACACTACCCGGCACCACCATCCCG < SRR4302543.5043507/94‑1 (MQ=60)
AGACATCCACTGAGCCTTCAGCATCGTAAATGGTGAAGGTCACTTTCAGCGAATTGGGATCGCGCTGCACACTACCCGGCACCACCATCCCGCC < SRR4302543.4837912/94‑1 (MQ=60)
AGACATCCACTGAGCCTTCAGCATCGTAAATGGTGAAGGTCACTTTCAGCGAATTGGGATCGCGCTGCACACTACCCGGCACCACCATCCCGCC < SRR4302543.3702550/94‑1 (MQ=60)
ACATCCACTGAGCCTTCAGCATCGTAAATGGTGAAGGTCACTTTCAGCGAATTGGGATCGCGCTGCACACTACCCGGCACCACCATCCCGCCAA > SRR4302543.1463/1‑94 (MQ=60)
ACATCCACTGAGCCTTCAGCATCGTAAATGGTGAAGGTCACTTTCAGCGAATTGGGATCGCGCTGCACACTACCCGGCACCACCATCCCGCCAA > SRR4302543.5035618/1‑94 (MQ=60)
ATCCACTGAGCCTTCAGCATCGTAAATGGTGAAGGTCACTTTCAGCGAATTGGGATCGCGCTGCACACTACCCGGCACCACCATCCCGCCAACG > SRR4302543.807416/1‑94 (MQ=60)
CCACTGAGCCTTCAGCATCGTAAATGGTGAAGGTCACTTTCAGCGAATTGGGATCGCGCTGCACACTACCCGGCACCACCATCCCGCCAACGCG > SRR4302543.809138/1‑94 (MQ=60)
CCACTGAGCCTTCAGCATCGTAAATGGTGAAGGTCACTTTCAGCGAATTGGGATCGCGCTGCACACTACCCGGCACCACCATCCCGCCAACGCG > SRR4302543.4465929/1‑94 (MQ=60)
CACTGAGCCTTCAGCATCGTAAATGGTGAAGGTCACTTTCAGCGAATTGGGATCGCGCTGCACACTACCCGGCACCACCATCCCGCCAACGCGC > SRR4302543.592321/1‑94 (MQ=60)
ACTGAGCCTTCAGCATCGTAAATGGTGAAGGTCACTTTCAGCGAATTGGGATCGCGCTGCACCCTACCCGGAACCACCATCCCGCCAACGCGCA > SRR4302543.2340000/1‑94 (MQ=60)
ACTGAGCCTTCAGCATCGTAAATGGTGAAGGTCACTTTCAGCGAATTGGGATCGCGCTGCACACTACCCGGCACCACCATCCCGCCAACGCGCA < SRR4302543.5428020/94‑1 (MQ=60)
CTGAGCCTTCAGCATCGTAAATGGTGAAGGTCACTTTCAGCGAATTGGGATCGCGCTGCACACTACCCGGCACCACCATCCCGCCAACGCGCAG > SRR4302543.485904/1‑94 (MQ=60)
CTGAGCCTTCAGCATCGTAAATGGTGAAGGTCACTTTCAGCGAATTGGGATCGCGCTGCACACTACCCGGCACCACCATCCCGCCAACGCGCAG > SRR4302543.4506976/1‑94 (MQ=60)
CTGAGCCTTCAGCATCGTAAATGGTGAAGGTCACTTTCAGCGAATTGGGATCGCGCTGCACACTACCCGGCACCACCATCCCGCCAACGCGCAG < SRR4302543.980485/94‑1 (MQ=60)
TGAGCCTTCAGCATCGTAAATGGTGAAGGTCACTTTCAGCGAATTGGGATCGCGCTGCACACTACCCGGCACCACCATCCCGCCAACGCGCAGA > SRR4302543.875983/1‑94 (MQ=60)
GAGCCTTCAGCATCGTAAATGGTGAAGGTCACTTTCAGCGAATTGGGATCGCGCTGCACACTACCCGGCACCACCATCCCGCCAACGCGCAGAC < SRR4302543.7875478/94‑1 (MQ=60)
GAGCCTTCAGCAGCGTAAATGGTGAAGGTCTCTTTCAGCGAATTGGGATCGCGCTGCACACTCCCCGGCACCACCATCCCGCCAACGCGCAGAC < SRR4302543.7565467/94‑1 (MQ=60)
AGCCTTCAGCATCGTAAATGGTGAAGGTCACTTTCAGCGAATTGGGATCGCGCTGCACACTACCCGGCACCACCATCCCGCCAACGCGCAGACG > SRR4302543.4850302/1‑94 (MQ=60)
AGCCTTCAGCATCGTAAATGGTGAAGGTCACTTTCAGCGAATTGGGATCGCGCTGCACACTACCCGGCACCACCATCCCGCCAACGCGCAGACG > SRR4302543.4538455/1‑94 (MQ=60)
CCTTCAGCATCGTAAATGGTGAAGGTCACTTTCAGCGAATTGGGATCGCGCTGCACACTACCCGGCACCACCATCCCGCCAACGCGCAGACGCT < SRR4302543.5365904/94‑1 (MQ=60)
CCTTCAGCATCGTAAATGGTGAAGGTCACTTTCAGCGAATTGGGATCGCGCTGCACACTACCCGGCACCACCATCCCGCCAACGCGCAGACGCT < SRR4302543.129547/94‑1 (MQ=60)
CCTTCAGCATCGTAAATGGTGAAGGTCACTTTCAGCGAATTGGGATCGCGCTGCACACTACCCGGCACCACCATCCCGCCAACGCGCAGACGCT < SRR4302543.5386488/94‑1 (MQ=60)
CCTTCAGCATCGTAAATGGTGAAGGTCACTTTCAGCGAATTGGGATCGCGCTGCACACTACCCGGCACCACCATCCCGCCAACGCGCAGACGCT > SRR4302543.3403777/1‑94 (MQ=60)
CCTTCAGCATCGTAAATGGTGAAGGTCACTTTCAGCGAATTGGGATCGCGCTGCACACTACCCGGCACCACCATCCCGCCAACGCGCAGACGCT < SRR4302543.869528/94‑1 (MQ=60)
CTTCAGCATCGTAAATGGTGAAGGTCACTTTCAGCGAATTGGGATCGCGCTGCACACTACCCGGCACCACCATCCCGCCAACGCGCAGACGCTG > SRR4302543.602487/1‑94 (MQ=60)
CTTCAGCATCGTAAATGGTGAAGGTCACTTTCAGCGAATTGGGATCGCGCTGCACACTACCCGGCACCACCATCCCGCCAACGCGCAGACGCTG > SRR4302543.3309943/1‑94 (MQ=60)
TTCAGCATCGTAAATGGTGAAGGTCACTTTCAGCGAATTGGGATCGCGCTGCACACTACCCGGCACCACCATCCCGCCAACGCGCAGACGCTGA > SRR4302543.5764580/1‑94 (MQ=60)
AGCATCGTAAATGGTGAAGGTCACTTTCAGCGAATTGGGATCGCGCTGCACACTACCCGGCACCACCATCCCGCCAACGCGCAGACGCTGACCG > SRR4302543.355028/1‑94 (MQ=60)
GTATCGTAAATGGTGAAGGTCACTTTCAGCGAATTGGGATCGCGCTGCACACTACCCGGCACCACCATCCCGCCAACGCGCAGACGCTGACCGA > SRR4302543.6263073/1‑94 (MQ=60)
CATCGTAAATGGTGAAGGTCACTTTCAGCGAATTGGGATCGCGCTGCACACTACCCGGCACCACCATCCCGCCAACGCGCAGACGCTGACCGAC > SRR4302543.699746/1‑94 (MQ=60)
ATCGTAAATGGTGAAGGTCACTTTCAGCGAATTGGGATCGCGCTGCACACTACCCGGCTCCACCATCCCGCCAACGCGCAGACGCTGACCGACT > SRR4302543.7000349/1‑94 (MQ=60)
ATCGTAAATGGTGAAGGTCACTTTCAGCGAATTGGGATCGCGCTGCACACTACCCGGCACCACCATCCCGCCAACGCGCAGACGCTGACCGACT > SRR4302543.2764631/1‑94 (MQ=60)
ATCGTAAATGGTGAAGGTCACTTTCAGCGAATTGGGATCGCGCTGCACACTACCCGGCACCACCATCCCGCCAACGCGCAGACGCTGACCGACT < SRR4302543.475011/94‑1 (MQ=60)
ATCGTAAATGGTGAAGGTCACTTTCAGCGAATTGGGATCGCGCTGCACACTACCCGGCACCACCATCCCGCCAACGCGCAGACGCTGACCGACT < SRR4302543.4474142/94‑1 (MQ=60)
ATCGTAAATGGTGAAGGTCACTTTCAGCGAATTGGGATCGCGCTGCACACTACCCGGCACCACCATCCCGCCAACGCGCAGACGCTGACCGACT > SRR4302543.1870459/1‑94 (MQ=60)
TCGTAAATGGTGAAGGTCACTTTCAGCGAATTGGGATCGCGCTGCACACTACCCGGCACCACCATCCCGCCAACGCGCAGACGCTGACCGACTT < SRR4302543.7184663/94‑1 (MQ=60)
TCGTAAATGGTGAAGGTCACTTTCAGCGAATTGGGATCGCGCTGCACACTACCCGGCACCACCATCCCGCCAACGCGCAGACGCTGACCGACTT < SRR4302543.7149247/94‑1 (MQ=60)
CGTAAATGGTGAAGGTCACTTTCAGCGAATTGGGATCGCGCTGCACACTACCCGGCACCACCATCCCGCCAACGCGCAGACGCTGACCGACTTC > SRR4302543.2560175/1‑94 (MQ=60)
GTAAATGGTGAAGGTCACTTTCAGCGAATTGGGATCGCGCTGCACACTACCCGGCACCACCATCCCGCCAACGCGCAGACGCTGACCGACTTCC < SRR4302543.4210300/94‑1 (MQ=60)
GTAAATGGTGAAGGTCACTTTCAGCGAATTGGGATCGCGCTGCACACTACCCGGCACCACCATCCCGCCAACGCGCAGACGCTGACCGACTTCC > SRR4302543.1608287/1‑94 (MQ=60)
GTAAATGGTGAAGGTCACTTTCAGCGAATTGGGATCGCGCTGCACACTACCCGGCACCACCATCCCGCCAACGCGCAGACGCTGACCGACTTCC > SRR4302543.4405905/1‑94 (MQ=60)
GTAAATGGTGAAGGTCACTTTCAACGAATTGGGATCGCGCTGCACACTACCCGGCACCACCATCCCGCCAACGCGCAGACGCTGACCGACTTCC > SRR4302543.2223676/1‑94 (MQ=60)
CTAAATGGTGAAGGTCACTTTCAGCGAATTGGGATCGCGCTGCACACTACCCGGCACCACCATCCCGCCAACGCGCAGACGCTGACCGACTTCC < SRR4302543.2499126/94‑1 (MQ=60)
TAAATGGTGAAGGTCACTTTCAGCGAATTGGGATCGCGCTGCACACTACCCGGCACCACCATCCCGCCAACGCGCAGACGCTGACCGACTTCCG < SRR4302543.7949209/94‑1 (MQ=60)
AAATGGTGAAGGTCACTTTCAGCGAATTGGGATCGCGCTGCACACTACCCGGCACCACCATCCCGCCAACGCGCAGACGCTGACCGACTTCCGG > SRR4302543.5010500/1‑94 (MQ=60)
TGGTGAAGGTCACTTTCAGCGAATTGGGATCGCGCTGCACACTACCCGGCACCACCATCCCGCCAACGCGCAGACGCTGACCGACTTCCGGCAT < SRR4302543.5349909/94‑1 (MQ=60)
GTGAAGGTCACTTTCAGCGAATTGGGATCGCGCTGCACACTACCCGGCACCACCATCCCGCCAACGCGCAGACGCTGACCGACTTCCGGCATTT < SRR4302543.3171591/94‑1 (MQ=60)
TGAAGGTCACTTTCAGCGAATTGGGATCGCGCTGCACACTACCCGGCACCACCATCCCGCCAACGCGCAGACGCTGACCGACTTCCGGCATTTG > SRR4302543.6455517/1‑94 (MQ=60)
TGAAGGTCACTTTCAGCGAATTGGGATCGCGCTGCACACTACCCGGCACCACCATCCCGCCAACGCGCAGACGCTGACCGACTTCCGGCATTTG > SRR4302543.2806833/1‑94 (MQ=60)
GAAGGTCACTTTCAGCGAATTGGGATCGCGCTGCACACTACCCGGCACCACCATCCCGCCAACGCGCAGACGCTGACCGACTTCCGGCATTTGC > SRR4302543.4483131/1‑94 (MQ=60)
AAGGTCACTTTCAGCGAATTGGGATCGCGCTGCACACTACCCGGCACCACCATCCCGCCAACGCGCAGACGCTGACCGACTTCCGGCATTTGCT > SRR4302543.121667/1‑94 (MQ=60)
AGGTCACTTTCAGCGAATTGGGATCGCGCTGCACACTACCCGGCACCACCATCCCGCCAACGCGCAGACGCTGACCGACTTCCGGCATTTGCTG > SRR4302543.1636098/1‑94 (MQ=60)
GGTCACTTTCAGCGAATTGGGATCGCGCTGCACACTACCCGGCACCACCATCCCGCCAACGCGCAGACGCTGACCGACTTCCGGCATTTGCTGA > SRR4302543.283906/1‑94 (MQ=60)
GTCACTTTCAGCGAATTGGGATCGCGCTGCACACTACCCGGCACCACCATCCCGCCAACGCGCAGACGCTGACCGACTTCCGGCATTTGCTGAG < SRR4302543.4449105/94‑1 (MQ=60)
TCACTTTCAGCGAATTGGGATCGCGCTGCACACTACCCGGCACCACCATCCCGCCAACGCGCAGACGCTGACCGACTTCCGGCATTTGCTGAGT > SRR4302543.54272/1‑94 (MQ=60)
CACTTTCAGCGAATTGGGATCGCGCTGCACACTACCCGGCACCACCATCCCGCCAACGCGCAGACGCTGACCGACTTCCGGCATTTGCTGAGTT > SRR4302543.2325942/1‑94 (MQ=60)
CACTTTCAGCGAATTGGGATCGCGCTGCACACTACCCGGCACCACCATCCCGCCAACGCGCAGACGCTGACCGACTTCCGGCATTTGCTGAGTT > SRR4302543.2338101/1‑94 (MQ=60)
CTTTCAGCGAATTGGGATCGCGCTGCACACTACCCGGCACCACCATCCCGCCAACGCGCAGACGCTGACCGACTTCCGGCATTTGCTGAGTTTC < SRR4302543.7421937/94‑1 (MQ=60)
TTTCAGCGAATTGGGATCGCGCTGCACACTACCCGGCACCACCATCCCGCCAACGCGCAGACGCTGACCGACTTTCGGCATTTGCTGAGTTTCA > SRR4302543.3200944/1‑94 (MQ=60)
TTCAGCGAATTGGGATCGCGCTGCACACTACCCGGCACCACCATCCCGCCAACGCGCAGACGCTGACCGACTTCCGGCATTTGCTGAGTTTCAC < SRR4302543.734369/94‑1 (MQ=60)
TTCAGCGAATTGGGATCGCGCTGCACACTACCCGGCACCACCATCCCGCCAACGCGCAGACGCTGACCGACTTCCGGCATTTGCTGAGTTTCAC < SRR4302543.2501707/94‑1 (MQ=60)
tcacgGAATTGGGATCGCGCTGCGCACTACCCGTCACCACCATCCAGCCAACGCGGAGACGCTGACCGACTTCCGGCATTTGCTGAGTTTCACG < SRR4302543.6117312/89‑1 (MQ=60)
TCAGCGAATTGGGATCGCGCTGCACACTACCCGGCACCACCATCCCGCCAACGCGCAGACGCTGACCGACTTCCGGCATTTGCTGAGTTTCACG > SRR4302543.7532803/1‑94 (MQ=60)
TCAGCGAATTGGGATCGCGCTGCACACTACCCGGCACCACCATCCCGCCAACGCGCAGACGCTGACCGACTTCCGGCATTTGCTGAGTTTCACG < SRR4302543.2511084/94‑1 (MQ=60)
TCAGCGAATTGGGATCGCGCTGCACACTACCCGGCACCACCATCCCGCCAACGCGCAGACGCTGACCGACTTCCGGCATTTGCTGAGTTTCACG > SRR4302543.361678/1‑94 (MQ=60)
CAGCGAATTGGGATCGCGCTGCACACTACCCGGCACCACCATCCCGCCAACGCGCAGACGCTGACCGACTTCCGGCATTTGCTGAGTTTCACGC > SRR4302543.4411962/1‑94 (MQ=60)
AGCGAATTGGGATCGCGCTGCACACTACCCGGCACCACCATCCCGCCAACGCGCAGACGCTGAGCGACTTCCGGCATTTGCTGAGTTTCACGCT > SRR4302543.18392/1‑94 (MQ=60)
AGCGAATTGGGATCGCGCTGCACACTACCCGGCACCACCATCCCGCCAACGCGCAGACGCTGACCGACTTCCGGCATTTGCTGAGTTTCACGCT < SRR4302543.3983353/94‑1 (MQ=60)
AGCGAATTGGGATCGCGCTGCACACTACCCGGCACCACCATCCCGCCAACGCGCAGACGCTGACCGACTTCCGGCATTTGCTGAGTTTCACGCT > SRR4302543.5096173/1‑94 (MQ=60)
TGAATTGGGATCGCGCTGCACACTACCCGGCACCACCATCCCGCCAACGCGCAGACGCTGACCGACTTCCGGCATTTGCTGAGTTTCACGCTTG < SRR4302543.876911/94‑1 (MQ=60)
CGAATTGGGATCGCGCTGCACACTACCCGGCACCACCATCCCGCCAACGCGCAGACGCTGACCGACTTCCGGCATTTGCTGAGTTTCACGCTTG < SRR4302543.2592189/94‑1 (MQ=60)
CGAATTGGGATCGCGCTGCACACTACCCGGCACCACCATCCCGCCAACGCGCAGACGCTGACCGACTTCCGGCATTTGCTGAGTTTCACGCTTG < SRR4302543.3210797/94‑1 (MQ=60)
CGAATTGGGATCGCGCTGCACACTACCCGGCACCACCATCCCGCCAACGCGCAGACGCTGACCGACTTCCGGCATTTGCTGAGTTTCACGCTTG < SRR4302543.1477197/94‑1 (MQ=60)
GAATTGGGATCGCGCTGCACACTACCCGGCACCACCATCCCGCCAACGCGCAGACGCTGACCGACTTCCGGCATTTGCTGTGTTTCACGCTTGC > SRR4302543.1433297/1‑94 (MQ=60)
AATTGGGATCGCGCTGCACACTACCCGGCACCACCATCCCGCCAACGCGCAGACGCTGACCGACTTCCGGCATTTGCTGAGTTTCACGCTTGCC > SRR4302543.3587180/1‑94 (MQ=60)
ATTGGGATCGCGCTGCACACTACCCGGCACCACCATCCCGCCAACGCGCAGACGCTGACCGACTTCCGGCATTTGCTGAGTTTCACGCTTGCCG > SRR4302543.819142/1‑94 (MQ=60)
TGGGATCGCGCTGCACACTACCCGGCACCACCATCCCGCCAACGCGCAGACGCTGACCGACTTCCGGCATTTGCTGAGTTTCACGCTTGCCGTA > SRR4302543.3671631/1‑94 (MQ=60)
GGGATCGCGCTGCACACTACCCGGCACCACCATCCCGCCAACGCGCAGACGCTGACCGACTTCCGGCATTTGCTGAGTTTCACGCTTGCCGTAG < SRR4302543.7765160/94‑1 (MQ=60)
GGATCGCGCTGCACACTACCCGGCACCACCATCCCGCCAACGCGCAGACGCTGACCGACTTCCGGCATTTGCTGAGTTTCACGCTTGCCGTAGA < SRR4302543.2485791/94‑1 (MQ=60)
GGATCGCGCTGCACACTACCCGGCACCACCATCCCGCCAACGCGCAGACGCTGACCGACTTCCGGCATTTGCTGAGTTTCACGCTTGCCGTAGA > SRR4302543.5067098/1‑94 (MQ=60)
GGATCGCGCTGCACACTACCCCGCACCCCCCACCCGCCAACGCGCAGACGCTGACCGACTTCCGGCATTTGCTGAGTTTCACGCTTGCCGTAGA < SRR4302543.2485546/94‑1 (MQ=60)
GATCGCGCTGCACACTACCCGGCACCACCATCCCGCCAACGCGCAGACGCTGACCGACTTCCGGCATTTGCTGAGTTTCACGCTTGCCGTAGAG < SRR4302543.5802343/94‑1 (MQ=60)
CGCGCTGCACACTACCCGGCACCACCATCCCGCCAACGCGCAGACGCTGACCGACTTCCGGCATTTGCTGAGTTTCACGCTTGCCGTAGAGAAT < SRR4302543.6864872/94‑1 (MQ=60)
CGCGCTGCACACTACCCGGCACCACCATCCCGCAAACGCGCAGACGCTGACCGACTTCCGGCATTTGCTGAGTTTCACGCTTGCCGTAGAGAAT < SRR4302543.7724515/94‑1 (MQ=60)
GCGCTGCACACTACCCGGCACCACCATCCCGCCAACGCGCAGACGCTGACCGACTTCCGGCATTTGCTGAGTTTCACGCTTGCCGTAGAGAATT < SRR4302543.4669676/94‑1 (MQ=60)
CGCTGCACACTACCCGGCACCACCATCCCGCCAACGCGCAGACGCTGACCGACTTCCGGCATTTGCTGAGTTTCACGCTTGCCGTAGAGAATTT > SRR4302543.5620104/1‑94 (MQ=60)
GCTGCACACTACCCGGCACCACCATCCCGCCAACGCGCAGACGCTGACCGACTTCCGGCATTTGCTGAGTTTCACGCTTGCCGTAGAGAATTTC < SRR4302543.2072686/94‑1 (MQ=60)
CTGCACACTACCCGGCACCACCATCCCGCCAACGCGCAGACGCTGACCGACTTCCGGCATTTGCTGAGTTTCACGCTTGCCGTAGAGAATTTCC < SRR4302543.5398787/94‑1 (MQ=60)
CTCCACACTACCCGGCCCCACCATCCGGCCAACGCGCAGACGCTGACCGACTTCCGGCATTTGCTGAGTTTCACGCTTGCCGTAGAGAATTTCC < SRR4302543.5398788/94‑1 (MQ=60)
GCACACTACCCGGCACCACCATCCCGCCAACGCGCAGACGCTGACCGACTTCCGGCATTTGCTGAGTTTCACGCTTGCCGTAGAGAATTTCCCC > SRR4302543.6966347/1‑94 (MQ=60)
GCACACTACCCGGCACCACCATCCCGCCAACGCGCAGACGCTGACCGACTTCCGGCATTTGCTGAGTTTCACGCTTGCCGTAGAGAATTTCCCC < SRR4302543.7642554/94‑1 (MQ=60)
CACACTACCCGGCACCACCATCCCGCCAACGCGCAGACGCTGACCGACTTCCGGCATTTGCTGAGTTTCACGCTTGCCGTAGAGAATTTCCCCC > SRR4302543.6333791/1‑94 (MQ=60)
ACACTACCCGGCACCACCATCCCGCCAACGCGCAGACGCTGACCGACTTCCGGCATTTGCTGAGTTTCACGCTTGCCGTAGAGAATTTCCCCCG > SRR4302543.356862/1‑94 (MQ=60)
CACTACCCGGCACCACCATCCCTCCAACGCGCAGACGCTGACCGACTTCCGGCAGTTGCTGCGTTTCACGCTTGCCGTAGAGAATTTCCCCCtc > SRR4302543.4450234/1‑92 (MQ=60)
CACTACCCGGCACCACCATCCCGCCAACGCGCAGACGCTGACCGACTTCCGGCATTTGCTGAGTTTCACGCTTGCCGTAGAGAATTTCCCCCGG > SRR4302543.7220008/1‑94 (MQ=60)
cctcCCCGGCACCACCATCCCGCCAACGCGCAGACGCTGACCGACTTCCGGCATTTGCTGAGTTTCACGCTTGCCGTAGAGAATTTCCCCCGGC < SRR4302543.3830441/90‑1 (MQ=60)
ACTACCCGGCACCACCATCCCGCCAACGCGCAGACGCTGACCGACTTCCGGCATTTGCTGAGTTTCACGCTTGCCGTAGAGAATTTCCCCCGGC < SRR4302543.3895054/94‑1 (MQ=60)
CTACCCGGCACCACCATCCCGCCAACGCGCAGACGCTGACCGACTTCCGGCATTTGCTGAGTTTCACGCTTGCCGTAGAGAATTTCCCCCGGCG > SRR4302543.7672218/1‑94 (MQ=60)
CTACCCGGCACCACCATCCCGCCAACGCGCAGACGCTGACCGACTTCCGGCATTTGCTGAGTTTCACGCTTGCCGTAGAGAATTTCCCCCGGCG > SRR4302543.1329863/1‑94 (MQ=60)
CTACCCGGCACCACCATCCCGCCAACGCGCAGACGCTGACCGACTTCCGGCATTTGCTGAGGTTCACGCTTGCCGTAGAGCATTTCCCACGGCG > SRR4302543.1627258/1‑94 (MQ=60)
CTACCCGGCACCACCATCCCGCCAACGCGCAGACGCTGACCGACTTCCGGCATTTGCTGAGCTTCACGCTTGCCGTAGAGAATTTCCCCCGGCG > SRR4302543.1627257/1‑94 (MQ=60)
CCCGGCACCACCATCCCGCCAACGCGCAGACGCTGAGCGACTTCCGGCATTTGCTGAGTTTCACGCTTGCCGTAGAGAATTTCCCCCGGCGTAT > SRR4302543.1383607/1‑94 (MQ=60)
CCCGGCACCACCATCCCGCCAACGCGCAGACGCTGACCGACTTCCGGCATTTGCTGAGTTTCACGCTTGCCGTAGAGAATTTCCCCCGGCGTAT > SRR4302543.1813433/1‑94 (MQ=60)
CCCGGCACCACCATCCCGCCAACGCGCAGACGCTGACCGACTTCCGGCATTTGCTGAGTTTCACGCTTGCCGTAGAGAATTTCCCCCGGCGTAT > SRR4302543.6399937/1‑94 (MQ=60)
CCCGGCACCACCATCCCGCCAACGCGCAGACGCTGACCGACTTCCGGCATTTGCTGAGTTTCACGCTTGCCGTAGAGAATTTCCCCCGGCGTAT < SRR4302543.1323439/94‑1 (MQ=60)
CGGCACCCCCATCCCGCCAACGCGCAGACGCTGACCGACTTCCGGCATTTGCTGAGTTTCACGCTTGCCGTAGAGAATTTCCCCCGGCGTATAA < SRR4302543.5843137/94‑1 (MQ=60)
CGGCACCACCATCCCGCCAACGCGCAGACGCTGACCGACTTCCGGCATTTGCTGAGTTTCACGCTTGCCGTAGAGAATTTCCCCCGGCGTATAA > SRR4302543.7994817/1‑94 (MQ=60)
CGGCACCACCATCCCGCCAACGCGCAGACGCTGACCGACTTCCGGCATTTGCTGAGTTTCACGCTTGCCGTAGAGAATTTCCCCCGGCGTATAA < SRR4302543.7367351/94‑1 (MQ=60)
GCACCACCATCCCGCCAACGCGCAGACGCTGACCGACTTCCGGCATTTGCTGAGTTTCACGCTTGCCGTAGAGAATTTCCCCCGGCGTATAAAA < SRR4302543.7856772/94‑1 (MQ=60)
ACCACCATCCCGCCAACGCGCAGACGCTGACCGACTTCCGGCATTTGCTGAGTTTCACGCTTGCCGTAGAGAATTTCCCCCGGCGTATAAAAGA > SRR4302543.7558459/1‑94 (MQ=60)
ACCACCATCCCGCCAACGCGCAGACGCTGACCGACTTCCGGCATTTGCTGAGTTTCACGCTTGCCGTAGAGAATTTCCCCCGGCGTATAAAAGA < SRR4302543.4165439/94‑1 (MQ=60)
CCACCATCCCGCCAACGCGCAGATGCTGACCGGCTTCCGGCATTTGCTGAGTTTCACGCTTGCCGTAGAGAATTTCCCCCGGCGTATAAAAGAG < SRR4302543.2820005/94‑1 (MQ=60)
CCACCATCCCGCCAACGCGCAGACGCTGACCGACTTCCGGCATTTGCTGAGTTTCACGCTTGCCGTAGAGAATTTCCCCCGGCGTATAAAAGAG > SRR4302543.7524219/1‑94 (MQ=60)
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GCCTTCGTAAGAGACATCCACTGAGCCTTCAGCATCGTAAATGGTGAAGGTCACTTTCAGCGAATTGGGATCGCGCTGCACACTACCCGGCATCACCATCCCGCCAACGCGCAGACGCTGACCGACTTCCGGCATTTGCTGAGTTTCACGCTTGCCGTAGAGAATTTCCCCCGGCGTATAAAAGAG > NC_000913/2293110‑2293295
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| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 2 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
