Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A1 F1 I1 R1 1696 279.3 15874187 97.8% 15524954 93.0

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 2,935,409 T→C intergenic (+28/‑51) fucI → / → fucK L‑fucose isomerase/L‑fuculokinase

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009132,935,4090TC100.0% 1000.5 / NA 319intergenic (+28/‑51)fucI/fucKL‑fucose isomerase/L‑fuculokinase
Reads supporting (aligned to +/- strand):  ref base T (0/0);  new base C (147/172);  total (147/172)

Only 100 of 330 total aligned reads displayed.

ATGGATATTGAAGGCCAGGATTACCGCGCTTGCCAGAACTACGGTCCGTTGTACAAGCGTTAATACATTACTCCCTGATGTGATGCCCGGTCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAGCCGGATAAGCAATGTTATCCGGCTATATTGCAGGAGCGATTATGAAACAA  >  NC_000913/2935319‑2935498
                                                                                          |                                                                                         
 tGGATATTGAAGGCCAGGATTACCGCGCTTGCCAGAACTACGGTCCGTTGTACAAGCGTTAATACATTACTCCCTGATGTGATGCCCGGCCGc                                                                                        >  2:4117579/1‑93 (MQ=255)
  ggATATTGAAGGCCAGGATTACCGCGCTTGCCAGAACTACGGTCCGTTGTACAAGCGTTAATACATTACTCCCTGATGTGATGCCCGGCCGCt                                                                                       >  2:4384182/1‑93 (MQ=255)
    atatTGAAGGCCAGGATTACCGCGCTTGCCAGAACTACGGTCCGTTGTACAAGCGTTAATACATTACTCCCTGATGTGATGCCCGGCCGCTcc                                                                                     <  1:612102/93‑1 (MQ=255)
    atatTGAAGGCCAGGATTACCGCGCTTGCCAGAACTACGGTCCGTTGTACAAGCGTTAATACATTACTCCCTGATGTGATGCCCGGCCGCTcc                                                                                     >  1:3216281/1‑93 (MQ=255)
     tatTGAAGGCCAGGATTACCGCGCTTGCCAGAACTACGGTCCGTTGTACAAGCGTTAATACATTACTCCCTGATGTGATGCCCGGCCGCTCCg                                                                                    <  2:5250465/93‑1 (MQ=255)
      atTGAAGGCCAGGATTACCGCGCTTGCCAGAACTACGGTCCGTTGTACAAGCGTTAATACATTACTCCCTGATGTGATGCCCGGCCGCTCCgg                                                                                   >  2:230868/1‑93 (MQ=255)
            ggCCAGGATTACCGCGCTTGCCAGAACTACGGTCCGTTGTACAAGCGTTAATACATTACTCCCTGATGTGATGCCCGGCCGCTCCGGCTACCg                                                                             <  1:3568299/93‑1 (MQ=255)
             gCCAGGATTACCGCGCTTGCCAGAACTACGGTCCGTTGTACAAGCGTTAATACATTACTCCCTGATGTGATGCCCGGCCGCTCCGGCTACCgg                                                                            >  2:1417632/1‑93 (MQ=255)
               cAGGATTACCGCGCTTGCCAGAACTACGGTCCGTTGTACAAGCGTTAATACATTACTCCCTGATGTGATGCCCGGCCGCTCCGGCTACCGGGc                                                                          <  2:3839394/93‑1 (MQ=255)
               cAGGATTACCGCGCTTGCCAGAACTACGGTCCGTTGTACAAGCGTTAATACATTACTCCCTGATGTGATGCCCGGCCGCTCCGGCTACCGGGc                                                                          >  1:2179627/1‑93 (MQ=255)
               cAGGATTACCGCGCTTGCCAGAACTACGGTCCGTTGTACAAGCGTTAATACATTACTCCCTGATGTGATGCCCGGCCGCTCCGGCTACCGGGc                                                                          >  1:3105155/1‑93 (MQ=255)
               cAGGATTACCGCGCTTGCCAGAACTACGGTCCGTTGTACAAGCGTTAATACATTACTCCCTGATGTGATGCCCGGCCGCTCCGGCTACCGGGc                                                                          >  1:2555786/1‑93 (MQ=255)
                 ggATTACCGCGCTTGCCAGAACTACGGTCCGTTGTACAAGCGTTAATACATTACTCCCTGATGTGATGCCCGGCCGCTCCGGCTACCGGGCCt                                                                        >  1:5274123/1‑93 (MQ=255)
                 ggATTACCGCGCTTGCCAGAACTACGGTCCGTTGTACAAGCGTTAATACATTACTCCCTGATGTGATGCCCGGCCGCTCCGGCTACCGGGCCt                                                                        >  2:5597247/1‑93 (MQ=255)
                   aTTACCGCGCTGGCAAGAACTACGGTCCGTGGTACAAGCGTTAATACATTACTCCCTGATGTGATGCCCGGCCGCTCCGGCTACCGGGCCTGa                                                                      <  2:3563062/93‑1 (MQ=255)
                     tACCGCGCTTGCCAGAACTACGGTCCGTTGTACAAGCGTTAATACATTACTCCCTGATGTGATGCCCGGCCGCTCCGGCTACCGGGCCTGAAc                                                                    <  1:5431128/93‑1 (MQ=255)
                      aCCGCGCTTGCCAGAACTACGGTCCGTTGTACAAGCGTTAATACATTACTCCCTGATGTGATGCCCGGCCGCTCCGGCTACCGGGCCTGAAca                                                                   <  2:1254911/93‑1 (MQ=255)
                      aCCGCGCTTGCCAGAACTACGGTCCGTTGTACAAGCGTTAATACATTACTCCCTGATGTGATGCCCGGCCGCTCCGGCTACCGGGCCTGAAca                                                                   >  1:7422689/1‑93 (MQ=255)
                       ccGCGCTTGCCAGAACTACGGTCCGTTGTACAAGCGTTAATACATTACTCCCTGATGTGATGCCCGGCCGCTCCGGCTACCGGGCCTGAAcaa                                                                  <  1:1069532/93‑1 (MQ=255)
                        cgcgCTTGCCAGAACTACGGTCCGTTGTACAAGCGTTAATACATTACTCCCTGATGTGATGCCCGGCCGCTCCGGCTACCGGGCCTGAAcaag                                                                 <  1:6416140/93‑1 (MQ=255)
                        cgcgCTTGCCAGAACTACGGTCCGTTGTACAAGCGTTAATACATTACTCCCTGATGTGATGCCCGGCCGCTCCGGCTACCGGGCCTGAAcaag                                                                 >  1:5764637/1‑93 (MQ=255)
                         gcgcTTGCCAGAACTACGGTCCGTTGTACAAGCGTTAATACATTACTCCCTGATGTGATGCCCGGCCGCTCCGGCTACCGGGCCTGAAcaagc                                                                <  2:251469/93‑1 (MQ=255)
                         gcgcTTGCCAGAACTACGGTCCGTTGTACAAGCGTTAATACATTACTCCCTGATGTGATGCCCGGCCGCTCCGGCTACCGGGCCTGAAcaagc                                                                <  1:6514783/93‑1 (MQ=255)
                           gcTTGCCAGAACTACGGTCCGTTGTACAAGCGTTAATACATTACTCCCTGATGTGATGCCCGGCCGCTCCGGCTACCGGGCCTGAAcaagcaa                                                              <  2:1699604/93‑1 (MQ=255)
                                ccAGAACTACGGTCCGTTGTACAAGCGTTAATACATTACTCCCTGATGTGATGCCCGGCCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTg                                                         >  2:6816617/1‑93 (MQ=255)
                                ccAGAACTACGGTCCGTTGTACAAGCGTTAATACATTACTCCCTGATGTGATGCCCGGCCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTg                                                         >  2:5925288/1‑93 (MQ=255)
                                 cAGAACTACGGTCCGTTGTACAAGCGTTAATACATTACTCCCTGATGTGATGCCCGGACGCTCCGGCTACCGTGCCTGTATAAGCAAGAGAgg                                                        >  2:4552949/1‑93 (MQ=255)
                                  aGAACTACGGTCCGTTGTACAAGCGTTACTCCATTACTCCCTGATGTGATGCCCGGCCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGt                                                       <  2:2944277/93‑1 (MQ=255)
                                  aGAACTACGGTCCGTTGTACAAGCGTTAATACATTACTCCCTGATGTGATGCCCGGCCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGt                                                       >  1:956006/1‑93 (MQ=255)
                                  aGAACTACGGTCCGTTGTACAAGCGTTAATACATTACTCCCTGATGTGATGCCCGGCCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGt                                                       >  1:2009472/1‑93 (MQ=255)
                                  aGAACTACGGTCCGTTGTACAAGCGTTAATACATTACTCCCTGATGTGATGCCCGGCCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGt                                                       <  1:668101/93‑1 (MQ=255)
                                   gAACTACGGTCCGTTGTACAAGCGTTAATACATTACTCCCTGATGTGATGCCCGGCCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGtt                                                      >  2:4750989/1‑93 (MQ=255)
                                   gAACTACGGTCCGTTGTACAAGCGTTAATACATTACTCCCTGATGTGATGCCCGGCCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGtt                                                      >  1:4698622/1‑93 (MQ=255)
                                    aaCTACGGTCGGTTGTACAAGCGTTAATACATTACTCCCTGATGTGATGCCCGGCCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTa                                                     <  2:4137061/93‑1 (MQ=255)
                                     aCTACGGTCCGTTGTACAAGCGTTAATACATTACTCCCTGATGTGATGCCCGGCCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAg                                                    >  2:2081051/1‑93 (MQ=255)
                                     aCTACGGTCCGTTGTACAAGCGTTAATACATTACTCCCTGATGTGATGCCCGGCCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAg                                                    >  1:4439266/1‑93 (MQ=255)
                                      cTACGGTCCGTTGTACAAGCGTTAATACATTACTCCCTGATGTGATGCCCGGCCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAGc                                                   >  1:4154450/1‑93 (MQ=255)
                                       tACGGTCCGTTGTACAAGCGTTAATACATTACTCCCTGATGTGATGCCCGGCCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAGcc                                                  >  1:1500985/1‑93 (MQ=255)
                                          ggTCCGTTGTACAAGCGTTAATACATTACTCCCTGATGTGATGCCCGGCCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAGCCGGa                                               <  2:3154529/93‑1 (MQ=255)
                                          ggTCCGTTGTACAAGCGTTAATACATTACTCCCTGATGTGATGCCCGGCCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAGCCGGa                                               <  2:7447440/93‑1 (MQ=255)
                                           gTCCGTTGTACAAGCGTTAATACATTCCTCCCTGATGTGATGCCCGGCCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAGCCGGAt                                              <  1:1182098/93‑1 (MQ=255)
                                            tCCGTTGTACAAGCGTTAATACATTACTCCCTGATGTGATGCCCGGCCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAGCCGGATa                                             >  2:2573745/1‑93 (MQ=255)
                                            tCCGTTGTACAAGCGTTAATACATTACTCCCTGATGTGATGCCCGGCCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAGCCGGATa                                             >  2:3682687/1‑93 (MQ=255)
                                            tCCGTTGTACAAGCGTTAATACATTACTCCCTGATGTGATGCCCGGCCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAGCCGGATa                                             >  1:4907100/1‑93 (MQ=255)
                                             ccGTTGTACAAGCGTTAATACATTACTCCCTGATGTGATGCCCGGCCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAGCCGGATaa                                            <  2:6120210/93‑1 (MQ=255)
                                              cGTTGTACAAGCGTTAATACATTACTCCCTGATGTGATGCCCGGCCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAGCCGGATAAg                                           <  2:6229168/93‑1 (MQ=255)
                                               gTTGTACAAGCGTTAATACATTACTCCCTGATGTGATGGCCGGCCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTGAGCCGGATAAga                                          >  1:1856550/1‑92 (MQ=255)
                                               gTTGTACAAGCGTTAATACATTACTCCCTGATGTGATGCCCGGCCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAGCCGGATAAGc                                          >  2:7633133/1‑93 (MQ=255)
                                               gTTGTACAAGCGTTAATACATTACTCCCTGATGTGATGCCCGGCCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAGCCGGATAAGc                                          <  2:5510536/93‑1 (MQ=255)
                                               gTTGTACAAGCGTTAATACATTACTCCCTGATGTGATGCCCGGCCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAGACGGATAAga                                          >  2:5079238/1‑92 (MQ=255)
                                                ttGTACAAGCGTTAATACATTACTCCCTGATGTGATGCCCGGCCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAGCCGGATAAGCa                                         >  2:1238438/1‑93 (MQ=255)
                                                  ttACAAGCGTTAATACATTACTCCCTGATGTGATGCCCGGCCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAGCCGGATAAGCAAt                                       <  2:1809083/92‑1 (MQ=255)
                                                  gTACAAGCGTTAATACATTACTCCCTGATGTGATGCCCGGCCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAGCCGGATAAGCAAt                                       <  1:7800815/93‑1 (MQ=255)
                                                  gTACAAGCGTTAATACATTACTCCCTGATGTGATGCCCGGCCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAGCCGGATAAGCAAt                                       >  2:5867366/1‑93 (MQ=255)
                                                  gTACAAGCGTTAATACATTACTCCCTGATGTGATGCCCGGCCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAGCCGGATAAGCAAt                                       >  1:3978095/1‑93 (MQ=255)
                                                   tACAAGCGTTAATACATTACTCCCTGATGTGATGCCCGGCCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAGCCGGATAAGCAATg                                      >  2:6465782/1‑93 (MQ=255)
                                                    aCAAGCGTTAATACATTACTCCCTGATGTGATGCCCGGCCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAGCCGGATAAGCAATGt                                     <  1:1208206/93‑1 (MQ=255)
                                                    aCAAGCGTTAATACATTACTCCCTGATGTGATGCCCGGCCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAGCCGGATAAGCAATGt                                     <  1:6211973/93‑1 (MQ=255)
                                                    aCAAGCGTTAATACATTACTCCCTGATGTGATGCCCGGCCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAGCCGGATAAGCAATGt                                     <  2:6892674/93‑1 (MQ=255)
                                                     cAAGCGTTAATACATTACTCCCTGATGTGATGCCCGGCCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAGCCGGATAAGCAATGtt                                    <  2:4924090/93‑1 (MQ=255)
                                                       aGCGTTAATACATTACTCCCTGATGTGATGCCCGGCCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAGCCGGATAAGCAATGTTAt                                  >  1:3649907/1‑93 (MQ=255)
                                                        gCGTTAATACATTACTCCCTGATGTGATGCCCGGCCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAGCCGGATAAGCAATGTTATc                                 <  1:2924569/93‑1 (MQ=255)
                                                        gCGTTAATACATTACTCCCTGATGTGATGCCCGGCCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAGCCGGATAAGCAATGTTATc                                 <  2:6625443/93‑1 (MQ=255)
                                                          gTTAATACATTACTCCCTGATGTGATGCCCGGCCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAGCCGGACAAGCAATGTTATCCg                               <  2:7820969/93‑1 (MQ=255)
                                                           ttAATACATTACTCCCTGATGTGATGCCCGGCCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAGCCGGATAAGCAATGTTATCCgg                              >  1:285039/1‑93 (MQ=255)
                                                            tAATACATTACTCCCTGATGTGATGCCCGGCCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAGCCGGATAAGCAATGTTATCCGGc                             <  2:2911553/93‑1 (MQ=255)
                                                            tAATACATTACTCCCTGATGTGATGCCCGGCCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAGCCGGATAAGCAATGTTATCCGGc                             <  2:7351654/93‑1 (MQ=255)
                                                              aTACATTACTCCCTGATGTGATGCCCGGCCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAGCCGGATAAGCAATGTTATCCGGCta                           >  1:4651700/1‑93 (MQ=255)
                                                              aTACATTACTCCCTGATGTGATGCCCGGCCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAGCCGGATAAGCAATGTTATCCGGCta                           <  2:2013478/93‑1 (MQ=255)
                                                                aCATTACTCCCTGATGTGATGCCCGGCCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAGCCGGATAAGCAATGTTATCCGGCtata                         <  2:300783/93‑1 (MQ=255)
                                                                aCATTACTCCCTGATGTGATGCCCGGCCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAGCCGGATAAGCAATGTTATCCGGCtata                         <  2:5454875/93‑1 (MQ=255)
                                                                aCATTACTCCCTGATGTGATGCCAGGCCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAGCCGGATAAGCAATGTTATCCGGCtata                         <  2:4356385/93‑1 (MQ=255)
                                                                 cATTACTCCCTGATGTGATGCCCGGCCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAGCCGGATAAGCAATGTTATCCGGCTatat                        <  1:1649446/93‑1 (MQ=255)
                                                                 cATTACTCCCTGATGTGATGCCCGGCCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAGCCGGATAAGCAATGTTATCCGGCTatat                        <  2:7525735/93‑1 (MQ=255)
                                                                 cATTACTCCCTGATGTGATGCCCGGCCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAGCCGGATAAGCAATGTTATCCGGCTatat                        >  1:2382717/1‑93 (MQ=255)
                                                                 cATTACTCCCTGATGTGATGCCCGGCCGCTCCGGCCACCGGGCCTGAACAAGCAAGAGTGGTTAGCCGGATAAGCAATGTTATCCGGCTatat                        <  2:3392763/93‑1 (MQ=255)
                                                                  aTTACTCCCTGATGTGATGCCCGGCCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAGCCGGATAAGCAATGTTATCCGGCTATAtt                       >  2:7115241/1‑93 (MQ=255)
                                                                    tACTCCCTGATGTGATGCCCGGCCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAGCCGGATAAGCAATGTTATCCGGCTATATTGc                     <  1:5681937/93‑1 (MQ=255)
                                                                     aCTCCCTGATGTGATGCACGGCCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAGCCGGATAAGCAATGTTATCCGGCTATATTGCa                    <  1:7038582/93‑1 (MQ=255)
                                                                       tCCCTGATGTGATGCCCGGCCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAGCCGGATAAGCAATGTTATCCGGCTATATTGCAgg                  <  1:7317169/93‑1 (MQ=255)
                                                                         ccTGATGTGATGCCCGGCCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAGCCGGATAAGCAATGTTATCCGGCTATATTGCAGGAg                >  2:1894571/1‑93 (MQ=255)
                                                                         ccTGATGTGATGCCCGGCCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAGCCGGATAAGCAATGTTATCCGGCTATATTGCAGGAg                >  1:1009532/1‑93 (MQ=255)
                                                                          cTGATGTGATGCCCGGCCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAGCCGGATAAGCAATGTTATCCGGCTATATTGCAGGAGc               <  2:2223830/93‑1 (MQ=255)
                                                                          cTGATGTGATGCCCGGCCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAGCCGGATAAGCAATGTTATCCGGCTATATTGCAGGAGc               <  2:7756131/93‑1 (MQ=255)
                                                                           tgatgtgatgCCCGGCCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAGCCGGATAAGCAATGTTATCCGGCTATATTGCAGGAGCg              >  1:4571892/1‑93 (MQ=255)
                                                                            gatgtgatgCCCGGCCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAGCCGGATAAGCAATGTTATCCGGCTATATTGCAGGGGCGa             >  1:7644344/1‑93 (MQ=255)
                                                                            gatgtgatgCCCGGCCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAGCCGGATAAGCAATGTTATCCGGCTATATTGCAGGAGCGa             <  1:3389375/93‑1 (MQ=255)
                                                                            gatgtgatgCCCGGCCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAGCCGGATAAGCAATGTTATCCGGCTATATTGCAGGAGCGa             >  2:2412237/1‑93 (MQ=255)
                                                                            gatgtgatgCCCGGCCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAGCCGGATAAGCAATGTTATCCGGCTATATTGCAGGAGCGa             <  2:3330833/93‑1 (MQ=255)
                                                                            gatgtgatgCCCGGCCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAGCCCGATAAGCAATGTTATCCGGCTATATTTCACGAGCGa             >  2:4041733/1‑93 (MQ=255)
                                                                             atgtgatgCCCGGCCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAGCCGGATAAGCAATGTTATCCGGCTATATTGCAGGAGCGAt            <  1:5992333/93‑1 (MQ=255)
                                                                             atgtgatgCCCGGCCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAGCCGGATAAGCAATGTTATCCGGCTATATTGCAGGAGCGAt            <  2:4459669/93‑1 (MQ=255)
                                                                               ttgatgCCCGGCCGCTCCGGCTATCGGGCCTGAACAAGCAAGAGTGGTTAGCCGGATAAGCAATGTTATCCGGCTATATTGCAGGAGCGATTa          <  2:2807707/92‑1 (MQ=255)
                                                                               gtgatgCCCGGCCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAGCCGGATAAGCAATGTTATCCGGCTATATTGCAGGAGCGATTa          <  1:7250878/93‑1 (MQ=255)
                                                                               gtgatgCCCGGCCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAGCCGGATAAGCAATGTTATCCGGCTATATTGCAGGAGCGATTa          <  1:3900731/93‑1 (MQ=255)
                                                                                   tgCCCGGCCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAGCCGGATAAGCAATGTTATCCGGCTATATTGCAGGAGCGATTATGaa      <  1:7906465/93‑1 (MQ=255)
                                                                                    gCCCGGCCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAGCCGGATAAGCAATGTTATCCGGCTATATTGCAGGAGCGATTATGaaa     >  1:3457756/1‑93 (MQ=255)
                                                                                     cccGGCCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAGCCGGATAAGCAATGTTATCCGGCTATATTGCAGGAGCGATTATGaaaa    >  2:3471056/1‑92 (MQ=255)
                                                                                      ccGGCCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAGCCGGATAAGCAATGTTATCCGGCTATATTGCAGGAGCGATTATGAAACa   <  1:2675960/93‑1 (MQ=255)
                                                                                      ccGGCCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAGCCGGATAAGCAATGTTATCCGGCTATATTGCAGGAGCGATTATGAAACa   <  1:5008886/93‑1 (MQ=255)
                                                                                          |                                                                                         
ATGGATATTGAAGGCCAGGATTACCGCGCTTGCCAGAACTACGGTCCGTTGTACAAGCGTTAATACATTACTCCCTGATGTGATGCCCGGTCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAGCCGGATAAGCAATGTTATCCGGCTATATTGCAGGAGCGATTATGAAACAA  >  NC_000913/2935319‑2935498

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

BRESEQ :: bam2aln output
GGCATGGATATTGAAGGCCAGGATTACCGCGCTTGCCAGAACTACGGTCCGTTGTACAAGCGTTAATACATTACTCCCTGATGTGATGCCCGGTCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAGCCGGATAAGCAATGTTATCCGGCTATATTGCAGGAGCGATTATGAAACAAGAAG  >  NC_000913/2935316‑2935502
                                                                                             |                                                                                             
GGCATGGATATTGAAGGCCAGGATTACCGCGCTTGCCAGAACTACGGTCCGTTGTACAAGCGTTAATACATTACTCCCTGATGTGATGCCCGGC                                                                                               >  SRR4302543.7202512/1‑94 (MQ=60)
GGCATGGATATTGAAGGCCAGGATTACCGCGCTTGCCAGAACTACGGTCCGTTGTACAAGCGTTAATACATTACTCCCTGATGTGATGCCCGGC                                                                                               >  SRR4302543.1011561/1‑94 (MQ=60)
GGCATGGATATTGAAGGCCAGGATTACCGCGCTTGCCAGAACTACGGTCCGTTGTACAAGCGTTAATACATTACTCCCTGATGTGATGCCCGGC                                                                                               >  SRR4302543.3380410/1‑94 (MQ=60)
 GCATGGATATTGAAGGCCAGGATTACCGCGCTTGCCAGAACTACGGTCCGTTGTACAAGCGTTAATACATTACTCCCTGATGTGATGCCCGGCC                                                                                              >  SRR4302543.6585605/1‑94 (MQ=60)
 GCATGGATATTGAAGGCCAGGATTACCGCGCTTGCCAGAACTACGGTCCGTTGTACAAGCGTTAATACATTACTCCCTGATGTGATGCCCGGCC                                                                                              <  SRR4302543.938459/94‑1 (MQ=60)
  CATGGATATTGAAGGCCAGGATTACCGCGCTTGCCAGAACTACGGTCCGTTGTACAAGCGTTAATACATTACTCCCTGATGTGATGCCCGGCCG                                                                                             >  SRR4302543.7901651/1‑94 (MQ=60)
  CATGGATATTGAAGGCCAGGATTACCGCGCTTGCCAGAACTACGGTCCGTTGTACAAGCGTTAATACATTACTCCCTGATGTGATGCCCGGCCG                                                                                             <  SRR4302543.3614679/94‑1 (MQ=60)
   ATGGATATTGAAGGCCAGGATTACCGCGCTTGCCAGAACTACGGTCCGTTGTACAAGCGTTAATACATTACTCCCTGATGTGATGCCCGGCCGC                                                                                            >  SRR4302543.6549398/1‑94 (MQ=60)
   ATGGATATTGAAGGCCAGGATTACCGCGCTTGCCAGAACTACGGTCCGTTGTACAAGCGTTAATACATTACTCCCTGATGTGATGCCCGGCCGC                                                                                            >  SRR4302543.4082113/1‑94 (MQ=60)
    TGGATATTGAAGGCCAGGATTACCGCGCTTGCCAGAACTACGGTCCGTTGTACAAGCGTTAATACATTACTCCCTGATGTGATGCCCGGCCGCT                                                                                           >  SRR4302543.7311697/1‑94 (MQ=60)
     GGATATTGAAGGCCAGGATTACCGCGCTTGCCAGAACTACGGTCCGTTGTACAAGCGTTAATACATTACTCCCTGATGTGATGCCCGGCCGCTC                                                                                          <  SRR4302543.2834800/94‑1 (MQ=60)
     GGATATTGAAGGCCAGGATTACCGCGCTTGCCAGAACTACGGTCCGTTGTACAAGCGTTAATACATTACTCCCTGATATGATGCCCGGCCGCTC                                                                                          >  SRR4302543.1099858/1‑94 (MQ=60)
      GATATTGAAGGCCAGGATTACCGCGCTTGCCAGAACTACGGTCCGTTGTACAAGCGTTAATACATTACTCCCTGATGTGATGCCCGGCCGCTCC                                                                                         >  SRR4302543.3245337/1‑94 (MQ=60)
       ATATTGAAGGCCAGGATTACCGCGCTTGCCAGAACTACGGTCCGTTGTACAAGCGTTAATACATTACTCCCTGATGTGATGCCCGGCCGCTCCG                                                                                        <  SRR4302543.617695/94‑1 (MQ=60)
       ATATTGAAGGCCAGGATTACCGCGCTTGCCAGAACTACGGTCCGTTGTACAAGCGTTAATACATTACTCCCTGATGTGATGCCCGGCCGCTCCG                                                                                        <  SRR4302543.1063354/94‑1 (MQ=60)
       ATATTGAAGGCCAGGATTACCGCGCTTGCCAGAACTACGGTCCGTTGTACAAGCGTTAATACATTACTCCCTGATGTGATGCCCGGCCGCTCCG                                                                                        >  SRR4302543.1564510/1‑94 (MQ=60)
       ATATTGAAGGCCAGGATTACCGCGCTTGCCAGAACTACGGTCCGTTGTACAAGCGTTAATACATTACTCCCTGATGTGATGCCCGGCCGCTCCG                                                                                        >  SRR4302543.1564509/1‑94 (MQ=60)
       ATATTGAAGGCCAGGATTACCGCGCTTGCCAGAACTACGGTCCGTTGTACAAGCGTTAATACATTACTCCCTGATGTGATGCCCGGCCGCTCCG                                                                                        <  SRR4302543.1375122/94‑1 (MQ=60)
         ATTGAAGGCCAGGATTACCGCGCTTGCCAGAACTACGGTCCGTTGTACAAGCGTTAATACATTACTCCCTGATGTGATGCCCGGCCGCTCCGGC                                                                                      >  SRR4302543.2000503/1‑94 (MQ=60)
         ATTGAAGGCCAGGATTACCGCGCTTGCCAGAACTACGGTCCGTTGTACAAGCGTTAATACATTACTCCCTGATGTGATGCCCGGCCGCTCCGGC                                                                                      <  SRR4302543.652730/94‑1 (MQ=60)
         ATTGAAGGCCAGGATTACCGCGCTTGCCAGAACTACGGTCCGTTGTACAAGCGTTAATACATTACTCCCTGATGTGATGCCCGGCCGCTCCGGC                                                                                      >  SRR4302543.6459680/1‑94 (MQ=60)
            GAAGGCCAGGATTACCGCGCTTGCCAGAACTACGGTCCGTTGTACAAGCGTTAATACATTACTCCCTGATGTGATGCCCGGCCGCTCCGGCTAC                                                                                   <  SRR4302543.5593511/94‑1 (MQ=60)
            GAA‑GCCAAGATTACCCCGCCTGCCAGAACTACGGTCCGTTGTACAAGCGTTAATACATTACTCCCTGATGTGATGCCCGGCCGCTCCGGCTACC                                                                                  <  SRR4302543.357071/94‑1 (MQ=60)
             AAGGCCAGGATTACCGCGCTTGCCAGAACTACGGTCCGTTGTACAAGCGTTAATACATTACTCCCTGATGTGATGCCCGGCCGCTCCGGCTACC                                                                                  >  SRR4302543.816654/1‑94 (MQ=60)
             AAGGCCAGGATTACCGCGCTTGCCAGAACTACGGTCCGTTGTACAAGCGTTAATACATTACTCCCTGATGTGATGCCCGGCCGCTCCGGCTACC                                                                                  <  SRR4302543.7887895/94‑1 (MQ=60)
             AAGGCCAGGATTACCGCGCTTGCCAGAACTACGGTCCGTTGTACAAGCGTTAATACATTACTCCCTGATGTGATGCCCGGCCGCTCCGGCTACC                                                                                  <  SRR4302543.4003522/94‑1 (MQ=60)
              AGGCCAGGATTACCGCGCTTGCCAGAACTACGGTCCGTTGTACAAGCGTTAATACATTACTCCCTGATGTGATGCCCGGCCGCTCCGGCTACCG                                                                                 >  SRR4302543.31410/1‑94 (MQ=60)
               GGCCAGGATTACCGCGCTTGCCAGAACTACGGTCCGTTGTACAAGCGTTAATACATTACTCCCTGATGTGATGCCCGGCCGCTCCGGCTACCGG                                                                                <  SRR4302543.3599855/94‑1 (MQ=60)
               GGCCAGGATTACCGCGCTTGCCAGAACTACGGTCCGTTGTACAAGCGTTAATACATTACTCCCTGATGTGATGCACGGCCGCTCCGGCTACCGG                                                                                <  SRR4302543.7297573/94‑1 (MQ=60)
                GCCAGGATTACCGCGCTTGCCAGAACTACGGTCCGTTGTACAAGCGTTAATACATTACTCCCTGATGTGATGCCCGGCCGCTCCGGCTACCGGG                                                                               <  SRR4302543.2452723/94‑1 (MQ=60)
                 CCAGGATTACCGCGCTTGCCAGAACTACGGTCCGTTGTACAAGCGTTAATACATTACTCCCTGATGTGATGCCCGGCCGCTCCGGCTACCGGGC                                                                              >  SRR4302543.2199170/1‑94 (MQ=60)
                 CCAGGATTACCGCGCTTGCCAGAACTACGGTCCGTTGTACAAGCGTTAATACATTACTCCCTGATGTGATGCCCGGCCGCTCCGGCTACCGGGC                                                                              >  SRR4302543.3133086/1‑94 (MQ=60)
                 CCAGGATTACCGCGCTTGCCAGAACTACGGTCCGTTGTACAAGCGTTAATACATTACTCCCTGATGTGATGCCCGGCCGCTCCGGCTACCGGGC                                                                              >  SRR4302543.1181508/1‑94 (MQ=60)
                 CCAGGATTACCGCGCTTGCCAGAACTACGGTCCGTTGTACAAGCGTTAATACATTACTCCCTGATGTGATGCCCGGCCGCTCCGGCTACCGGGC                                                                              >  SRR4302543.2579153/1‑94 (MQ=60)
                  CAGGATTACCGCGCTTGCCAGAACTACGGTCCGTTGTACAAGCGTTAATACATTACTCCCTGATGTGATGCCCGGCCGCTCCGGCTACCGGGCC                                                                             >  SRR4302543.2247710/1‑94 (MQ=60)
                   AGGATTACCGCGCTTGCCAGAACTACGGTCCGTTGTACAAGCGTTAATACATTACTCCCTGATGTGATGCCCGGCCGCTCCGGCTACCGGGCCT                                                                            >  SRR4302543.1887979/1‑94 (MQ=60)
                   AGGATTACCGCGCTTGCCAGAACTACGGTCCGTTGTACAAGCGTTAATACATTACTCCCTGATGTGATGCCCGGCCGCTCCGGCTACCGGGCCT                                                                            >  SRR4302543.5321708/1‑94 (MQ=60)
                   AGGATTACCGCGCTTGCCAGAACTACGGTCCGTTGTACAAGCGTTAATACATTACTCCCTGATGTGATGCCCGGCCGCTCCGGCTACCGGGCCT                                                                            >  SRR4302543.7364460/1‑94 (MQ=60)
                   AGGATTACCGCGCTTGCCAGAACTACGGTCCGTTGTACAAGCGTTAATACATTACTCCCTGATGTGATGCCCGGCCGCTCCGGCTACCGGGCCT                                                                            >  SRR4302543.6312573/1‑94 (MQ=60)
                   AGGATTACCGCGCTTGCCAGAACTACGGTCCGTTGTACAAGCGTTAATACATTACTCCCTGATGTGATGCCCGGCCGCTCCGGCTACCGGGCCT                                                                            <  SRR4302543.2348841/94‑1 (MQ=60)
                    GTATTACCACGCTTGCCAGAACTACGGTCCGTTGTACAAGCGTTAATACATTACTCCCGGATGTGATGCCCGGCCGCTCCGGCTACCGGGCCTG                                                                           <  SRR4302543.3471688/94‑1 (MQ=60)
                    GGATTACCGCGCTTGCCAGAACTACGGTCCGTTGTACAAGCGTTAATACATTACTCCCTGATGTGATGCCCGGCCGCTCCGGCTACCGGGCCTG                                                                           >  SRR4302543.7422125/1‑94 (MQ=60)
                    GGATTACCGCGCTTGCCAGAACTACGGTCCGTTGTACAAGCGTTAATACATTACTCCCTGATGTGATGCCCGGCCGCTCCGGCTACCGGGCCTG                                                                           >  SRR4302543.812364/1‑94 (MQ=60)
                    GGATTACCGCGCTTGCCAGAACTACGGTCCGTTGTACAAGCGTTAATACATTACTCCCTGATGTGATGCCCGGCCGCTCCGGCTACCGGGCCTG                                                                           >  SRR4302543.7422370/1‑94 (MQ=60)
                    GGATTACCGCGCTTGCCAGAACTACGGTCCGTTGTACAAGCGTTAATACATTACTCCCTGATGTGATGCCCGGCCGCTCCGGCTACCGGGCCTG                                                                           <  SRR4302543.3471689/94‑1 (MQ=60)
                       TTACCGCGCTTGCCAGAACTACGGTCCGTTGTACAAGCGTTAATACATTACTCCCTGATGTGATGCCCGGCCGCTCCGGCTACCGGGCCTGAAC                                                                        >  SRR4302543.289646/1‑94 (MQ=60)
                        TACCGCGCTTGCCAGAACTACGGTCCGTTGTACAAGCGTTAATACATTACTCCCTGATGTGATGCCCGGCCGCTCCGGCTACCGGGGCTGAACA                                                                       >  SRR4302543.470008/1‑94 (MQ=60)
                        TACCGCGCTTGCCAGAACTACGGTCCGTTGTACAAGCGTTAATACATTACTCCCTGATGTGATGCCCGGCCGCTCCGGCTACCGGGCCTGAACA                                                                       <  SRR4302543.5480471/94‑1 (MQ=60)
                        TACCGCGCTTGCCAGAACTACGGTCCGTTGTACAAGCGTTAATACATTACTCCCTGATGTGATGCCCGGCCGCTCCGGCTACCGGGCCTGAACA                                                                       >  SRR4302543.7493883/1‑94 (MQ=60)
                          CCGCGCTTGCCAGAACTACGGTCCGTTGTACAAGCGTTAATACATTATTCCCTGATGTGATGCCCGGCCGCTCCGGCTACCGGGCCTGAACAAG                                                                     <  SRR4302543.2411842/94‑1 (MQ=60)
                          CCGCGCTTGCCAGAACTACGGTCCGTTGTACAAGCGTTAATACATTACTCCCTGATGTGATGCCCGGCCGCTCCGGCTACCGGGCCTGAACAAG                                                                     >  SRR4302543.5817142/1‑94 (MQ=60)
                          CCGCGCTTGCCAGAACTACGGTCCGTTGTACAAGCGTTAATACATTACTCCCTGATGTGATGCCCGGCCGCTCCGGCTACCGGGCCTGAACAAG                                                                     <  SRR4302543.1079147/94‑1 (MQ=60)
                           CGCGCTTGCCAGAACTACGGTCCGTTGTACAAGCGTTAATACATTACTCCCTGATGTGATGCCCGGCCGCTCCGGCTACCGGGCCTGAACAAGC                                                                    <  SRR4302543.6476582/94‑1 (MQ=60)
                            GCGCTTGCCAGAACTACGGTCCGTTGTACAAGCGTTAATACATTACTCCCTGATGTGATGCCCGGCCGCTCCGGCTACCGGGCCTGAACAAGCA                                                                   <  SRR4302543.6576145/94‑1 (MQ=60)
                              GCTTGCCAGAACTACGGTCCGTTGTACAAGCGTTAATACATTACTCCCTGATGTGATGCCCGGCCGCTCCGGCTACCGGGCCTGAACAAGCAAG                                                                 <  SRR4302543.1812912/94‑1 (MQ=60)
                               CTTGCCAGAACTACGGTCCGTTGTACAAGCGTTAATACATTACTCCCTGATGTGATGCCCGGCCGCTCCGGCTACCGGGCCTGAACAAGCAAGA                                                                <  SRR4302543.2899577/94‑1 (MQ=60)
                                TTGCCAGAACTACGGTCCGTTGTACAAGCGTTAATACATTACTCCCTGATGTGATGCCCGGCCGCTCCGGCTACCGGGCCTGAACAAGCAAGAG                                                               <  SRR4302543.7857413/94‑1 (MQ=60)
                                TTGCCAGAACTACGGTCCGTTGTACAAGCGTTAATACATTACTCCCTGATGTGATGCCCGGCCGCTCCGGCTACCGGGCCTGAACAAGCAAGAG                                                               >  SRR4302543.3636285/1‑94 (MQ=60)
                                  GCCAGAACTACGGTCCGTTGTACAAGCGTTAATACATTACTCCCTGATGTGATGCCCGGCCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTG                                                             <  SRR4302543.5877327/94‑1 (MQ=60)
                                   CCAGAACTACGGTCCGTTGTACAAGCGTTAATACATTACTCCCTGATGTGATGCCCGGCCGCTCCGGCTANCNNGCCTGAACAAGCNAGAGTGN                                                            >  SRR4302543.2669023/1‑94 (MQ=60)
                                   CCAGAACTACGGTCCGTTGTACAAGCGTTAATACATTACTCCCTGATGTGATGCCCGGCCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGG                                                            <  SRR4302543.6055698/94‑1 (MQ=60)
                                   CCAGAACTACGGTCCGTTGTACAAGCGTTAATACATTACTCCCTGATGTGATGCCCGGCCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGG                                                            <  SRR4302543.3427277/94‑1 (MQ=60)
                                    CAGAACTACGGTCCGTTGTACAAGCGTTAATACATTACTCCCTGATGTGATGCCCGGCCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGT                                                           >  SRR4302543.964385/1‑94 (MQ=60)
                                    CAGAACTACGGTCCGTTGTACAAGCGTTAATACATTACTCCCTGATGTGATGCCCGGCCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGT                                                           >  SRR4302543.2027529/1‑94 (MQ=60)
                                     AGAACTACGGTCCGTTGTACAAGCGTTAATACATTACTCCCTGATGTGATGCCCGGCCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTT                                                          >  SRR4302543.3706002/1‑94 (MQ=60)
                                     AGAACTACGGTCCGTTGTACAAGCGTTAATACATTACTCCCTGATGTGATGCCCGGCCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTT                                                          <  SRR4302543.674255/94‑1 (MQ=60)
                                     AGAACTACGGTCCGTTGTACAAGCGTTAATACATTACTCCCTGATGTGATGCCCGGCCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTT                                                          >  SRR4302543.4741532/1‑94 (MQ=60)
                                       AACTACGGTCCGTTGTACAAGCGTTAATACATTACTCCCTGATGTGATGCCCGGCCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAG                                                        <  SRR4302543.1934484/94‑1 (MQ=60)
                                       AACTACGGTCCGTTGTACAAGCGTTAATACATTACTCCCTGATGTGATGCCCGGCCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAG                                                        >  SRR4302543.4479467/1‑94 (MQ=60)
                                        ACTACGGTCCGTTGTACAAGCGTTAATACATTACTCCCTGATGTGATGCCCGGCCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAGC                                                       <  SRR4302543.1451688/94‑1 (MQ=60)
                                        ACTACGGTCCGTTGTACAAGCGTTAATACATTACTCCCTGATGTGATGCCCGGCCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAGC                                                       >  SRR4302543.4192011/1‑94 (MQ=60)
                                         CTACGGTCCGTTGTACAAGCGTTAATACATTACTCCCTGATGTGATGCCCGGCCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAGCC                                                      >  SRR4302543.1514480/1‑94 (MQ=60)
                                         CTACGGTCCGTTGTACAAGCGTTAATACATTACTCCCTGATGTGATGCCCGGCCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAGCC                                                      <  SRR4302543.4943845/94‑1 (MQ=60)
                                         CTACGGTCCGTTGTACAAGCGTTAATACATTACTCCCTGATGTGATGCCCGGCCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAGCC                                                      >  SRR4302543.4685297/1‑94 (MQ=60)
                                              GTCCGTTGTACAAGCGTTAATACATTCCTCCCTGATGTGATGCCCGGCCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAGCCGGATA                                                 <  SRR4302543.1192782/94‑1 (MQ=60)
                                              GTCCGTTGTACAAGCGTTAATACATTACTCCCTGATGTGATGCCCGGCCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAGCCGGATA                                                 >  SRR4302543.4951820/1‑94 (MQ=60)
                                              GTCCGTTGTACAAGCGTTAATACATTACTCCCTGATGTGATGCCCGGCCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAGCCGGATA                                                 >  SRR4302543.1078683/1‑94 (MQ=60)
                                              GTCCGTTGTACAAGCGTTAATACATTACTCCCTGATGTGATGCCCGGCCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAGCCGGATA                                                 <  SRR4302543.308212/94‑1 (MQ=60)
                                               TCCGTTGTACAAGCGTTAATACATTACTCCCTGATGTGATGCCCGGCCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAGCCGGATAA                                                <  SRR4302543.3350353/94‑1 (MQ=60)
                                                CCGTTGTACAAGCGTTAATACATTACTCCCTGATGTGATGCCCGGCCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAGCCGGATAAG                                               >  SRR4302543.5016962/1‑94 (MQ=60)
                                                CCGTTGTACAAGCGTTAATACATTACTCCCTGATGTGATGCCCGGCCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAGCCGGATAAG                                               <  SRR4302543.3771604/94‑1 (MQ=60)
                                                CCGTTGTACAAGCGTTAATACATTACTCCCTGATGTGATGCCCGGCCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAGCCGGATAAG                                               >  SRR4302543.3969628/1‑94 (MQ=60)
                                                CCGTTGTACAAGCGTTAATACATTACTCCCTGATGTGATGCCCGGCCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAGCCGGATAAG                                               <  SRR4302543.7779544/94‑1 (MQ=60)
                                                 CGTTGTACAAGCGTTAATACATTACTCCCTGATGTGATGGCCGGCCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTGAGCCGGATAAGA                                              >  SRR4302543.1873240/1‑94 (MQ=60)
                                                 CGTTGTACAAGCGTTAATACATTACTCCCTGATGTGATGCCCGGCCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAGCCGGATAAGC                                              >  SRR4302543.1205148/1‑94 (MQ=60)
                                                  GTTGTACAAGCGTTAATACATTACTCCCTGATGTGATGCCCGGCCGCTCCGGCTACCGGGCCTCAACAAGCAAGAGTGGTTAGCCGGATAAGCA                                             >  SRR4302543.2032492/1‑94 (MQ=60)
                                                   TTGTACAAGCGTTAATACATTACTCCCTGATGTGATGCCCGGCCGCTCCGGCTACCCGGCCTGAACAAGCAAGAGTGGTTAacagggaaaggaa                                            >  SRR4302543.5006708/1‑81 (MQ=60)
                                                    TGTACAAGCGTTAATACATTACTCCCTGATGTGATGCCCGGCCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAGCCGGATAAGCAAT                                           >  SRR4302543.4013375/1‑94 (MQ=60)
                                                    TGTACAAGCGTTAATACATTACTCCCTGATGTGATGCCCGGCCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAGCCGGATAAGCAAT                                           >  SRR4302543.6607397/1‑94 (MQ=60)
                                                     GTACAAGCGTTAATACATTACTCCCTGATGTGATGCCCGGCCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAGCCGGATAAGCAATG                                          <  SRR4302543.7874339/94‑1 (MQ=60)
                                                      TACAAGCGTTAATACATTACTCCCTGATGTGATGCCCGGCCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAGCCGGATAAGCAATGT                                         >  SRR4302543.5853338/1‑94 (MQ=60)
                                                       ACAAGCGTTAATACATTACTCCCTGATGTGATGCCCGGCCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAGCCGGATAAGCAATGTT                                        <  SRR4302543.5814584/94‑1 (MQ=60)
                                                       ACAAGCGTTAATACATTACTCCCTGATGTGATGCCCGGCCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAGCCGGATAAGCAATGTT                                        <  SRR4302543.1219072/94‑1 (MQ=60)
                                                       ACAAGCGTTAATACATTACTCCCTGATGTGATGCCCGGCCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAGCCGGATAAGCAATGTT                                        <  SRR4302543.6270627/94‑1 (MQ=60)
                                                       ACAAGCGTTAATACATTACTCCCTGATGTGATGCCCGGCCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAGCCGGATAAGCAATGTT                                        <  SRR4302543.5308140/94‑1 (MQ=60)
                                                         AAGCGTTAATACATTACTCCCTGATGTGATGCCCGGCCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAGCCGGATAAGCAATGTTAT                                      >  SRR4302543.3681982/1‑94 (MQ=60)
                                                         AAGCGTTAATACATTACTCCCTGATGTGATGCCCGGCCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAGCCGGATAAGCAATGTTAT                                      <  SRR4302543.676973/94‑1 (MQ=60)
                                                         AAGCGTTAATACATTACTCCCTGATGTGATGCCCGGCCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAGCCGGATAAGCAATGTTAT                                      <  SRR4302543.4483401/94‑1 (MQ=60)
                                                         AAGCGTTAATACATTACTCCCTGATGTGATGCCCGGCCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAGCCGGATAAGCAATGTTAT                                      <  SRR4302543.7515484/94‑1 (MQ=60)
                                                           GCGTTAATACATTACTCCCTGATGTGATGCCCGGCCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAGCCGGATAAGCAATGTTATCC                                    <  SRR4302543.4423929/94‑1 (MQ=60)
                                                           GCGTTAATACATTACTCCCTGATGTGATGCCCGGCCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAGCCGGATAAGCAATGTTATCC                                    <  SRR4302543.2951132/94‑1 (MQ=60)
                                                            CGTTAATACATTACTCCCTGATGTGATGCCCGGCCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAGCCGGATAAGCAATGTTATCCG                                   <  SRR4302543.5801090/94‑1 (MQ=60)
                                                            CGTTAATACATTACTCCCTGATGTGATGCCCGGCCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAGCCGGATAAGCAATGTTATCCG                                   <  SRR4302543.3000736/94‑1 (MQ=60)
                                                            CGTTAATACATTACTCCCTGATGTGATGCCCGGCCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAGCCGGATAAGCAATGTTATCCG                                   <  SRR4302543.332417/94‑1 (MQ=60)
                                                             GTTAATACATTACTCCCTGATGTGATGCCCGGCCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAGCCGGATAAGCAATGTTATCCGG                                  >  SRR4302543.287576/1‑94 (MQ=60)
                                                             GTTAATACATTACTCCCTGATGTGATGCCCGGCCGCNCCGGCTACCGGNCCTGAACAAGCAAGGNTGGTTNGCCGGATAAGGAATGTTANCCGG                                  >  SRR4302543.3188169/1‑94 (MQ=60)
                                                               TAATACATTACTCCCTGATGTGATGCCCGGCCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAGCCGGATAAGCAATGTTATCCGGCT                                <  SRR4302543.6727061/94‑1 (MQ=60)
                                                               TAATACATTACTCCCTGATGTGATGCCCGGCCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAGCCGGATAAGCAATGTTATCCGGCT                                <  SRR4302543.717448/94‑1 (MQ=60)
                                                                AATACATTACTCCCTGATGTGATGCCCGGCCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAGCCGGATAAGCAATGTTATCCGGCTA                               <  SRR4302543.5434965/94‑1 (MQ=60)
                                                                AATACATTACTCCCTGATGTGATGCCCGGCCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAGCCGGATAAGCAATGTTATCCGGCTA                               <  SRR4302543.1320843/94‑1 (MQ=60)
                                                                AATACATTACTCCCTGATGTGATGCCCGGCCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAGCCGGATAAGCAATGTTATCCGGCTA                               >  SRR4302543.4694043/1‑94 (MQ=60)
                                                                 ATACATTACTCCCTGATGTGATGCCCGGCCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAGCCGGATAAGCAATGTTATCCGGCTAT                              <  SRR4302543.2718106/94‑1 (MQ=60)
                                                                 ATACATTACTCCCTGATGTGATGCCCGGCCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAGCCGGATAAGCAATGTTATCCGGCTAT                              >  SRR4302543.2167018/1‑94 (MQ=60)
                                                                   ACATTTCTCCCTGATGTGATGCCCGGCCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAGCCGGATAAGCAATGTTATCCGGCTATAT                            <  SRR4302543.4670891/94‑1 (MQ=60)
                                                                   ACATTACTCCCTGATGTGATGCCCGGCCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAGCCGGATAAGCAATGTTATCCGGCTATAT                            >  SRR4302543.3647745/1‑94 (MQ=60)
                                                                   ACATTACTCCCTGATGTGATGCCCGGCCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAGCCGGATAAGCAATGTTATCCGGCTATAT                            >  SRR4302543.2404291/1‑94 (MQ=60)
                                                                   ACATTACTCCCTGATGTGATGCCCGGCCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAGCCGGATAAGCAATGTTATCCGGCTATAT                            <  SRR4302543.6217210/94‑1 (MQ=60)
                                                                   ACATTACTCCCTGATGTGATGCCCGGCCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAGCCGGATAAGCAATGTTATCCGGCTATAT                            <  SRR4302543.6217209/94‑1 (MQ=60)
                                                                    CATTACTCCCTGATGTGATGCCCGGCCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAGCCGGATAAGCAATGTTATCCGGCTATATT                           <  SRR4302543.457784/94‑1 (MQ=60)
                                                                    CATTACTCCCTGATGTGATGCCCGGCCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAGCCGGATAAGCAATGTTATCCGGCTATATT                           <  SRR4302543.1664200/94‑1 (MQ=60)
                                                                     ATTACTCCCTGATGTGATGCCCGGCCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAGCCGGATAAGCAATGTTATCCGGCTATATTG                          >  SRR4302543.1845224/1‑94 (MQ=60)
                                                                     ATTACTCCCTGATGTGATGCCCGGCCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAGCCGGATAAGCAATGTTATCCGGCTATATTG                          >  SRR4302543.4352739/1‑94 (MQ=60)
                                                                     ATTACTCCCTGATGTGATGCCCGGCCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAGCCGGATAAGCAATGTTATCCGGCTATATTG                          <  SRR4302543.4776670/94‑1 (MQ=60)
                                                                     ATTACTCCCTGATGTGATGCCCGGCCGATCCGGCTACCGGGCCTGAACAAGCAAGAGAGGTTAGCCGGTCAAGCAATGTGATCCGGCTATATTC                          >  SRR4302543.6566052/1‑94 (MQ=60)
                                                                       TACTCCCTGATGTGATGCCCGGCCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAGCCGGATAAGCAATGTTATCCGGCTATATTGCA                        <  SRR4302543.5733797/94‑1 (MQ=60)
                                                                        ACTCCCTGATGTGATGCACGGCCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAGCCGGATAAGCAATGTTATCCGGCTATATTGCAG                       <  SRR4302543.7106459/94‑1 (MQ=60)
                                                                         CTCCCTGATGTGATGCCCGGCCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAGCCGGATAAGCAATGTTATCCGGCTATATTGCAGG                      >  SRR4302543.252308/1‑94 (MQ=60)
                                                                         CTCCCTGATGTGATGCCCGGCCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAGCCGGATAAGCAATGTTATCCGGCTATATTGCAGG                      <  SRR4302543.7745287/94‑1 (MQ=60)
                                                                         CTCCCTGATGTGATGCCCGGCCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAGCCGGATAAGCAATGTTATCCGGCTATATTGCAGG                      >  SRR4302543.5293025/1‑94 (MQ=60)
                                                                          TCCCTGATGTGATGCCCGGCCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAGCCGGATAAGCAATGTTATCCGGCTATATTGCAGGA                     <  SRR4302543.7387667/94‑1 (MQ=60)
                                                                           CCCTGATGTGATGCCCGGCCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAGCCGGATAAGCAATGTTATCCGGCTATATTGCAGGAG                    <  SRR4302543.6124441/94‑1 (MQ=60)
                                                                           CCCTGATGTGATGCCCGGCCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAGCCGGATAAGCAATGTTATCCGGCTATATTGCAGGAG                    >  SRR4302543.1018463/1‑94 (MQ=60)
                                                                           CCCTGATGTGATGCCCGGCCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAGCCGGATAAGCAATGTTATCCGGCTATATTGCAGGAG                    <  SRR4302543.3061574/94‑1 (MQ=60)
                                                                            CCTGATGTGATGCCCGGCCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAGCCGGATAAGCAATGTTATCCGGCTATATTGCAGGAGC                   <  SRR4302543.1207032/94‑1 (MQ=60)
                                                                            CCTGATGTGATGCCCGGCCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAGCCGGATAAGCAATGTTATCCGGCTATATTGCAGGAGC                   >  SRR4302543.54062/1‑94 (MQ=60)
                                                                             CTGATGTGATGCCCGGCCGCTCCGGCTACCGGTCCTGAACAAGCAAGAGTGGTTAGCCGGATAAGCAATGTTATCCGGCTATATTGCAGGAGCG                  >  SRR4302543.7376769/1‑94 (MQ=60)
                                                                             CTGATGTGATGCCCGGCCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAGCCGGATAAGCAATGTTATCCGGCTATATTGCAGGAGCG                  <  SRR4302543.5050714/94‑1 (MQ=60)
                                                                             CTGATGTGATGCCCGGCCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAGCCGGATAAGCAATGTTATCCGGCTATATTGCAGGAGCG                  >  SRR4302543.4613466/1‑94 (MQ=60)
                                                                             CTGATGTGATGCCCGGCCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAGCCGGATAAGCAATGTTATCCGGCTATATTGCAGGAGCG                  <  SRR4302543.2676170/94‑1 (MQ=60)
                                                                             CTGATGTGATGCCCGGCCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAGCCGGATAAGCAATGTTATCCGGCTATATTGCAGGAGCG                  >  SRR4302543.5642464/1‑94 (MQ=60)
                                                                              TGATGTGATGCCCGGCCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAGCCGGATAAGCAATGTTATCCGGCTATATTGCAGGGGCGA                 >  SRR4302543.7716841/1‑94 (MQ=60)
                                                                              TGATGTGATGCCCGGCCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAGCCGGATAAGCAATGTTATCCGGCTATATTGCAGGAGCGA                 <  SRR4302543.3515541/94‑1 (MQ=60)
                                                                               GATGTGATGCCCGGCCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAGCCGGATAAGCAATGTTATCCTGCTATATTGCAAGAGCGAT                >  SRR4302543.3806187/1‑94 (MQ=60)
                                                                               GATGTGATGCCCGGCCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAGCCGGATAAGCAATGTTATCCGGCTATATTGCAGGAGCGAT                <  SRR4302543.3419765/94‑1 (MQ=60)
                                                                                ATGTGATGCCCGGCCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAGCCGGATAAGCAATGTTATCCGGCTATATTGCAGGAGCGATT               <  SRR4302543.6047253/94‑1 (MQ=60)
                                                                                ATGTGATGCCCGGCCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAGCCGGATAAGCAATGTTATCCGGCTATATTGCAGGAGCGATT               <  SRR4302543.7049114/94‑1 (MQ=60)
                                                                                  GTGATGCCCGGCCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAGCCGGATAAGCAATGTTATCCGGCTATATTGCAGGAGCGATTAT             <  SRR4302543.7321000/94‑1 (MQ=60)
                                                                                  GTGATGCCCGGCCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAGCCGGATAAGCAATGTTATCCGGCTATATTGCAGGAGCGATTAT             <  SRR4302543.3935176/94‑1 (MQ=60)
                                                                                   TGATGCCCGGCCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAGCCGGATAAGCAATGTTATCCGGCTATATTGCAGGAGCGATTATG            <  SRR4302543.546794/94‑1 (MQ=60)
                                                                                     ATGCCCGGCCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAGCCGGATAAGCAATGTTATCCGGCTATATTGCAGGAGCGATTATGAA          <  SRR4302543.4730202/94‑1 (MQ=60)
                                                                                     ATGCCCGGCCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAGCCGGATAAGCAATGTTATCCGGCTATATTGCAGGAGCGATTATGAA          <  SRR4302543.760715/94‑1 (MQ=60)
                                                                                     ATGCCCGGCCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAGCCGGATAAGCAATGTTATCCGGCTATATTGCAGGAGCGATTATGAA          <  SRR4302543.4552881/94‑1 (MQ=60)
                                                                                      TGCCCGGCCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAGCCGGATAAGCAATGTTATCCGGCTATATTGCAGGAGCGATTATGAAA         >  SRR4302543.3488731/1‑94 (MQ=60)
                                                                                      TGCCCGGCCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAGCCGGATAAGCAATGTTATCCGGCTATATTGCAGGAGCGATTATGAAA         <  SRR4302543.7980759/94‑1 (MQ=60)
                                                                                       GCCCGGCCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAGCCGGATAAGCAATGTTATCCGGCTATATTGCAGGAGCGATTATGAAAC        >  SRR4302543.6128918/1‑94 (MQ=60)
                                                                                         CCGGCCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAGCCGGATAAGCAATGTTATCCGGCTATATTGCAGGAGCGATTATGAAACAA      <  SRR4302543.2700222/94‑1 (MQ=60)
                                                                                         CCGGCCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAGCCGGATAAGCAATGTTATCCGGCTATATTGCAGGAGCGATTATGAAACAA      <  SRR4302543.5054468/94‑1 (MQ=60)
                                                                                          CGGCCGCTCCGGCTACCGGGCCTGAACAGGCAAGAGTGGTTAGCCGGATAAGCAATGTTATCCGGCTATATTGCAGGAGCGATTATGAAACAAG     <  SRR4302543.4825417/94‑1 (MQ=60)
                                                                                          CGGCCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAGCCGTATAAGCAATGTTATCCGGCTATATTGCAGGAGCGATTATGAAACAAG     <  SRR4302543.4134427/94‑1 (MQ=60)
                                                                                           GGCCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAGCCGGATAAGCAATGTTATCCGGCTATATTGCAGGAGCGATTATGAAACAAGA    >  SRR4302543.5153113/1‑94 (MQ=60)
                                                                                            GCCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAGCCGGATAAGCAATGTTATCCGGCTATATTGCAGGAGCGATTATGAAACAAGAA   <  SRR4302543.341615/94‑1 (MQ=60)
                                                                                            GCCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAGCCGGATAAGCAATGTTATCCGGCTATATTGCAGGAGCGATTATGAAACAAGAA   <  SRR4302543.7990594/94‑1 (MQ=60)
                                                                                             CCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAGCCGGATAAGCAATGTTATCCGGCTATATTGCAGGAGCGATTATGAAACAAGAAG  <  SRR4302543.5421741/94‑1 (MQ=60)
                                                                                             CCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAGCCGGATAAGCAATGTTATCCGGCTATATTGCAGGAGCGATTATGAAACAAGAAG  <  SRR4302543.883002/94‑1 (MQ=60)
                                                                                             |                                                                                             
GGCATGGATATTGAAGGCCAGGATTACCGCGCTTGCCAGAACTACGGTCCGTTGTACAAGCGTTAATACATTACTCCCTGATGTGATGCCCGGTCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAGCCGGATAAGCAATGTTATCCGGCTATATTGCAGGAGCGATTATGAAACAAGAAG  >  NC_000913/2935316‑2935502

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 28 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑