Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.

ALE, Flask, Isolate	Predicted Mutations	Mean Coverage	Total Reads	Percent Mapped	Mapped Reads	Average Read Length
A1 F1 I1 R1	1696	279.3	15874187	97.8%	15524954	93.0

Breseq alignment

BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	2,940,324	G→A	A89V (GCC→GTC)	gcvA ←	GcvA

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	2,940,324	0	G	A	99.7%	1150.1 / NA	329	A89V (GCC→GTC)	gcvA	GcvA
Reads supporting (aligned to +/- strand): ref base G (0/0); major base A (138/190); minor base C (0/1); total (138/191)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 337 total aligned reads displayed.

GCTGAATTAAAGCTGGAAAGTCGCGGAACCAACCAATGAATGGCGAAACTGGGGAGTAAACTGACCGTCAACGCCCCCTTGGCGCTACGGGCCTGGAGTTTACGCGTCGCTTCGGTTAATTGCGAAAATATCTCTTTGATATCGAGGAAATAGCTTTGCCCTTCCTCGGTCAGCAGGAGT  >  NC_000913/2940234‑2940413

gCTGAATTAAAGCTGGAAAGTCGCGGAACCAACCAATGAATGGCGAAACTGGGGAGTAAACTGACCGTCAACGCCCCCTTGGCGCTACGGAcc                                                                                         <  1:1107265/93‑1 (MQ=255)

 cTGAATTAAAGCTGGAAAGTCGCGGAACCAACCAATGAATGGCGAAACTGGGGAGTAAACTGACCGTCAACGCCCCCTTGGCGCTACGGACCt                                                                                        >  1:7068225/1‑93 (MQ=255)

 cTGAATTAAAGCTGGAAAGTCGCGGAACCAACCAATGAATGGCGAAACTGGGGAGTAAACTGACCGTCAACGCCCCCTTGGCGCTACGGACCt                                                                                        >  1:2301814/1‑93 (MQ=255)

    aaTTAAAGCTGGAAAGTCGCGGAACCAACCAATGAATGGCGAAACTGGGGAGTAAACTGACCGTCAACGCCCCCTTGGCGCTACGGACCTGGa                                                                                     <  2:1309310/93‑1 (MQ=255)

    aaTTAAAGCTGGAAAGTCGCGGAACCAACCAATGAATGGCGAAACTGGGGAGTAAACTGACCGTCAACGCCCCCTTGGCGCTACGGACCTGGa                                                                                     <  2:306413/93‑1 (MQ=255)

    aaTTAAAGCTGGAAAGTCGCGGAACCAACCAATGAATGGCGAAACTGGGGAGTAAACTGACCGTCAACGCCCCCTTGGCGCTACGGACCTGGa                                                                                     >  1:2846616/1‑93 (MQ=255)

     aTTAAAGCTGGAAAGTCGCGGAACCAACCAATGAATGGCGAAACTGGGGAGTAAACTGACCGTCAACGCCCCCTTGGCGCTACGGACCTGGAg                                                                                    <  1:5034523/93‑1 (MQ=255)

      ttAAAGCTGGAAAGTCGCGGAACCAACCAATGAATGGCGAAACTGGGGAGTAAACTGACCGTCAACGCCCCCTTGGCGCTACGGACCTGGAGt                                                                                   >  2:6873116/1‑93 (MQ=255)

         aaGCTGGAAAGTCGCGGAACCAACCAATGAATGGCGAAACTGGGGAGTAAACTGACCGTCAACGCCCCCTTGGCGCTGCGGACCTGGAGTTTa                                                                                <  1:4020676/93‑1 (MQ=255)

         aaGCTGGAAAGTCGCGGAACCAACCAATGAATGGCGAAACTGGGGAGTAAACTGACCGTCAACGCCCCCTTGGCGCTACGGACCTGGAGTTTa                                                                                <  1:4452123/93‑1 (MQ=255)

            cTGGAAAGTCGCGGAACCAACCAATGAATGGCGAAACTGGGGAGTAAACTGACCGTCAACGCCCCCTTGGCGCTACGGACCTGGAGTTTAcgc                                                                             >  2:5062314/1‑93 (MQ=255)

              ggAAAGTCGCGGAACCAACCAATGAATGGCGAAACTGGGGAGTAAACTGACCGTCAACGCCCCCTTGGCGCTACGGACCTGGAGTTTACGCGt                                                                           >  1:3949514/1‑93 (MQ=255)

              ggAAAGTCGCGGAACCAACCAATGAATGGCGAAACTGGGGAGTAAACTGACCGTCAACGCCCCCTTGGCGCTACGGACCTGGAGTTTACGCGt                                                                           >  1:3042183/1‑93 (MQ=255)

               gAAAGTCGCGGAACCAACCAATGAATGGCGAAACTGGGGAGTAAACTGACCGTCAACGCCCCCTTGGCGCTACGGACCTGGAGTTTACGCGTc                                                                          <  1:6666506/93‑1 (MQ=255)

               gAAAGTCGCGGAACCAACCAATGAATGGCGAAACTGGGGAGTAAACTGACCGTCAACGCCCCCTTGGCGCTACGGACCTGGAGTTTACGCGTc                                                                          >  1:3669425/1‑93 (MQ=255)

               gAAAGTCGCGGAACCAACCAATGAATGGCGAAACTGGGGAGTAAACTGACCGTCAACGCCCCCTTGGCGCTACGGACCTGGAGTTTACGCGTc                                                                          <  1:3454129/93‑1 (MQ=255)

               gAAAGTCGCGGAACCAACCAATGAATGGCGAAACTGGGGAGTAAACTGACCGTCAACGCCCCCTTGGCGCTACGGACCTGGAGTTTACGCGTc                                                                          <  2:5398250/93‑1 (MQ=255)

               gAAAGTCGCGGAACCAACCAATGAATGGCGAAACTGGGGAGTAAACTGACCGTCAACGCCCCCTTGGCGCTACGGACCTGGAGTTTACGCGTc                                                                          <  2:5952236/93‑1 (MQ=255)

               gAAAGTCGCGGAACCAACCAATGAATGGCGAAACTGGGGAGTAAACTGACCGTCAACGCCCCCTTGGCGCTACGGACCTGGAGTTTACGCGTc                                                                          <  1:2137924/93‑1 (MQ=255)

                 aaGTCGCGGAACCAACCAATGAATGGCGAAACTGGGGAGTAAACTGACCGTCAACGCCCCCTTGGCGCTACGGACCTGGAGTTTACGCGTCGc                                                                        <  2:2593389/93‑1 (MQ=255)

                 aaGTCGCGGAACCAACCAATGAATGGCGAAACTGGGGAGTAAACTGACCGTCAACGCCCCCTTGGCGCTACGGACCTGGAGTTTACGCGTCGc                                                                        >  2:6908069/1‑93 (MQ=255)

                  aGTCGCGGAACCAACCAATGAATGGCGAAACTGGGGAGTAAACTGACCGTCAACGCCCCCTTGGCGCTACGGACCTGGAGTTTACGCGTCGCt                                                                       >  1:7702185/1‑93 (MQ=255)

                   gTCGCGGAACCAACCAATGAATGGCGAAACTGGGGAGTAAACTGACCGTCAACGCCCCCTTGGCGCTACGGACCTGGAGTTTACGCGTCGcct                                                                      >  1:7000607/1‑91 (MQ=255)

                   gTCGCGGAACCAACCAATGAATGGCGAAACTGGGGAGTAAACTGACCGTCAACGCCCCCTTGGCGCTACGGACCTGGAGGTTACGCGTCGAtt                                                                      >  2:4033493/1‑93 (MQ=255)

                    tCGCGGAACCAACCAATGAATGGCGAAACTGGGGAGTAAACTGACCGTCAACGCCCCCTTGGCGCTACGGACCTGGAGTTTACGCGTCGCTTc                                                                     <  1:7179948/93‑1 (MQ=255)

                       cgGAACCAACCAATGAATGGCGAAACTGGGGAGTAAACTGACCGTCAACGCCCCCTTGGCGCTACGGACCTGGAGTTTACGCGTCGCTTCGGt                                                                  <  2:3912742/93‑1 (MQ=255)

                       cgGAACCAACCAATGAATGGCGAAACTGGGGAGTAAACTGACCGTCAACGCCCCCTTGGCGCTACGGACCTGGAGTTTACGCGTCGCTTCGGt                                                                  >  1:6423205/1‑93 (MQ=255)

                       cgGAACCAACCAATGAATGGCGAAACTGGGGAGTAAACTGACCGTCAACGCCCCCTTGGCGCTACGGACCTGGAGTTTACGCGTCGCTTCGGt                                                                  >  1:7515072/1‑93 (MQ=255)

                         gAACCAACCAATGAATGGCGAAACTGGGGAGTAAACTGACCGTCAACGCCCCCTTGGCGCTACGGACCTGGAGTTTACGCGTCGCTTCGGTTa                                                                <  1:5362875/93‑1 (MQ=255)

                          aaccaaccAATGAATGGCGAAACTGGGGAGTAAACTGACCGTCAACGCCCCCTTGGCGCTACGGACCTGGAGTTTACGCGTCGCTTCGGTTaa                                                               <  1:6275237/93‑1 (MQ=255)

                          aaccaaccAATGAATGGCGAAACTGGGGAGTAAACTGACCGTCAACGCCCCCTTGGCGCTACGGACCTGGAGTTTACGCGTCGCTTCGGTTaa                                                               <  2:7527767/93‑1 (MQ=255)

                          aaccaaccAATGAATGGCGAAACTGGGGAGTAAACTGACCGTCAACGCCCCCTTGGCGCTACGGACCTGGAGTTTACGCGTCGCTTCGGTTaa                                                               <  1:4706518/93‑1 (MQ=255)

                          aaccaaccAATGAATGGCGAAACTGGGGAGTAAACTGACCGTCAACGCCCCCTTGGCGCTACGGACCTGGAGTTTACGCGTCGCTTCGGTTaa                                                               <  2:7260632/93‑1 (MQ=255)

                           accaacaaATGAATGGCGAAACTGGGGAGTAAACTGACCGTCAACGCCCCCTTGGCGCTCCGGCCCTGGAGTTTACGCGTAGCTTCGGTTAAt                                                              <  2:4819738/93‑1 (MQ=255)

                            ccaaccaaTGAATGGCGAAACTGGGGAGTAAACTGACCGTCAACGCCCCCTTGGCGCTACGGACCTGGAGTTTACGCGTCGCTTCGGTTAAtt                                                             <  2:580934/93‑1 (MQ=255)

                            acaaccaaTGAATGGCGAAACTGGGGAGTAAACTGACCGTCAACGCCCCCTTGGCGCTACGGACCTGGAGTTTACGCGTCGCTTCGGTTAAtt                                                             <  1:2645082/92‑1 (MQ=255)

                             caaccaaTGAATGGCGAAACTGGGGAGTAAACTGACCGTCAACGCCCCCTTGGCGCTACGGACCTGGAGTTTACGCGTCGCTTCGGTTAATTg                                                            <  1:4981524/93‑1 (MQ=255)

                              aaccaaTGAATGGCGAAACTGGGGAGTAAACTGACCGTCAACGCCCCCTTGGCGCTACGGACCTGGAGTTTACGCGTCGCTTCGGTTAATTGc                                                           >  1:7858038/1‑93 (MQ=255)

                              aaccaaTGAATGGCGAAACTGGGGAGTAAACTGACCGTCAACGCCCCCTTGGCGCTACGGACCTGGAGTTTACGCGTCGCTTCGGTTAATTGc                                                           <  1:4624825/93‑1 (MQ=255)

                                ccaaTGAATGGCGAAACTGGGGAGTAAACTGACCGTCAACGCCCCCTTGGCGCTACGGACCTGGAGTTTACGCGTCGCTTCGGTTAATTGCGa                                                         >  1:968653/1‑93 (MQ=255)

                                ccaaTGAATGGCGAAACTGGGGAGTAAACTGACCGTCAACGCCCCCTTGGCGCTACGGACCTGGAGTTTACGCGTCGCTTCGGTTAATTGCGa                                                         <  1:1926853/93‑1 (MQ=255)

                                 caaTGAATGGCGAAACTGGGGAGTAACCTGACCGTCAACGCCCCCTTGGCGCTACGGACCTGGAGTTTACGCGTCGCTTCGGTTAATTGCGaa                                                        <  1:6793902/93‑1 (MQ=255)

                                 caaTGAATGGCGAAACTGGGGAGTAAACTGACCGTCAACGCCCCCTTGGCGCTACGGACCTGGAGTTTACGCGTCGCTTCGGTTAATTGCGaa                                                        >  1:3537345/1‑93 (MQ=255)

                                  aatgaatgGCGAAACTGGGGAGTAAACTGACCGTCAACGCCCCCTTGGCGCTACGGACCTGGAGTTTACGCGTCGCTTCGGTTAATTGCGaaa                                                       >  1:2478532/1‑93 (MQ=255)

                                   atgaatgGCGAAACTGGGGAGTAAACTGACCGTCAACGCCCCCTTGGCGCTACGGACCTGGAGTTTACGCGTCGCTTCGGTTAATTGCGaaaa                                                      <  2:851322/93‑1 (MQ=255)

                                   atgaatgGCGAAACTGGGGAGTAAACTGACCGTCAACGCCCCCTTGGCGCTACGGACCTGGAGTTTACGCGTCGCTTCGGTTAATTGCGaaaa                                                      <  1:3617230/93‑1 (MQ=255)

                                   atgaatgGCGAAACTGGGGAGTAAACTGACCGTCAACGCCCCCTTGGCGCTACGGACCTGGAGGTTACGCGTCGCTTCGGTTAATTGCGaaaa                                                      >  1:3326980/1‑93 (MQ=255)

                                    tgaatgGCGAAACTGGGGAGTAAACTGACCGTCAACGCCCCCTTGGCGCTACGGACCTGGAGTTTACGCGTCGCTTCGGTTAATTGCGAAAat                                                     >  2:2090155/1‑93 (MQ=255)

                                    tgaatgGCGAAACTGGGGAGTAAACTGACCGTCAACGCCCCCTTGGCGCTACGGACCTGGAGTTTACGCGTCGCTTCGGTTAATTGCGAAAat                                                     <  1:5322729/93‑1 (MQ=255)

                                     gaatgGCGAAACTGGGGAGTAAACTGACCGTCAACGCCCCCTTGGCGCTACGGACCTGGAGTTTACGCGTCGCTTCGGTTAATTGCGAAAata                                                    >  2:17718/1‑93 (MQ=255)

                                            gAAACTGGGGAGTAAACTGACCGTCAACGCCCCCTTGGCGCTACGGACCTGGAGTTTACGCGTCGCTTCGGTTAATTGCGAAAATATCTCttt                                             <  1:2946953/93‑1 (MQ=255)

                                            gAAACTGGGGAGTAAACTGACCGTCAACGCCCCCTTGGCGCTACGGACCTGGAGTTTACGCGTCGCTTCGGTTAATTGCGAAAATATCTCttt                                             <  2:4943955/93‑1 (MQ=255)

                                            gAAACTGGGGAGTAAACTGACCGTCAACGCCCCCTTGGCGCTACGGACCTGGAGTTTACGCGTCGCTTCGGTTAATTGCGAAAATATCTCttt                                             >  1:4250853/1‑93 (MQ=255)

                                             aaaCTGGGGAGTAAACTGACCGTCAACGCCCCCTTGGCGCTACGGACCTGGAGTTTACGCGTCGCTTCGGTTAATTGCGAAAATATCTCTTTg                                            >  1:1350216/1‑93 (MQ=255)

                                              aaCTGGGGAGTAAACTGACCGTCAACGCCCCCTTGGCGCTACGGACCTGGAGTTTACGCGTCGCTTCGGTTAATTGCGAAAATATCTCTTTGa                                           <  2:2253465/93‑1 (MQ=255)

                                              aaCTGGGGAGTAAACTGACCGTCAACGCCCCCTTGGCGCTACGGACCTGGAGTTTACGCGTCGCTTCGGTTAATTGCGAAAATATCTCTTTGa                                           <  2:4344663/93‑1 (MQ=255)

                                                 tGGGGAGTAAACTGACCGTCAACGCCCCCTTGGCGCTACGGACCTGGAGTTTACGCGTCGCTTCGGTTAATTGCGAAAATATCTCTTTGatat                                        >  1:1012308/1‑93 (MQ=255)

                                                 tGGGGAGTAAACTGACCGTCAACGCCCCCTTGGCGCTACGGACCTGGAGTTTACGCGTCGCTTCGGTTAATTGCGAAAATATCTCTTTGatat                                        <  2:3259978/93‑1 (MQ=255)

                                                 tGGGGAGTAAACTGACCGTCAACGCCCCCTTGGCGCTACGGACCTGGAGTTTACGCGTCGCTTCGGTTAATTGCGAAAATATCTCTTTGatat                                        >  2:5186794/1‑93 (MQ=255)

                                                  ggggAGTAAACTGACCGTCAACGCCCCCTTGGCGCTACGGACCTGGAGTTTACGCGTCGCTTCGGTTAATTGCGAAAATATCTCTTTGATATc                                       <  2:1142955/93‑1 (MQ=255)

                                                  ggggAGTAAACTGACCGTCAACGCCCCCTTGGCGCTACGGACCTGGAGTTTACGCGTCGCTTCGGTTAATTGCGAAAATATCTCTTTGATATc                                       <  1:903493/93‑1 (MQ=255)

                                                  ggggAGTAAACTGACCGTCAACGCCCCCTTGGCGCTACGGACCTGGAGTTTACGCGTCGCTTCGGTTAATTGCGAAAATATCTCTTTGATATc                                       >  2:4072878/1‑93 (MQ=255)

                                                  ggggAGTAAACTGACCGTCAACGCCCCCTTGGCGCTACGGACCTGGAGTTTACGCGTCGCTTCGGTTAATTGCGAAAATATCTCTTTGATATc                                       <  2:6137697/93‑1 (MQ=255)

                                                     gAGTAAACTGACCGTCAACGCCCCCTTGGCGCTACGGACCTGGAGTTTACGCGTCGCTTCGTTTAATTGCGAAAATATCTCTTTGATATCGAg                                    <  2:3553142/93‑1 (MQ=255)

                                                        tAAACTGACCGTCAACGCCCCCTTGGCGCTACGGACCTGGAGTTTACGCGTCGCTTCGGTTAATTGCGAAAATATCTCTTTGATATCGAGGaa                                 >  1:2081340/1‑93 (MQ=255)

                                                        tAAACTGACCGTCAACGCCCCCTTGGCGCTACGGACCTGGAGTTTACGCGTCGCTTCGGTTAATTGCGAAAATATCTCTTTGATATCGAGGaa                                 <  2:3857911/93‑1 (MQ=255)

                                                         aaaCTGACCGTCAACGCCCCCTTGGCGCTACGGACCTGGAGTTTACGCGTCGCTTCGGTTAATTGCGAAAATATCTCTTTGATATCGAGGaaa                                <  2:1595368/93‑1 (MQ=255)

                                                         aaaCTGACCGTCAACGCCCCCTTGGCGCTACGGACCTGGAGTTTACGCGTCGCTTCGGTTAATTGCGAAAATATCTCTTTGATATCGAGGaaa                                <  1:1584965/93‑1 (MQ=255)

                                                         aaaCTGACCGTCAACGCCCCCTTGGCGCTACGGACCTGGAGTTTACGCGTCGCTTCGGTTAATTGCGAAAATATCTCTTTGATATCGAGGaaa                                <  2:2933982/93‑1 (MQ=255)

                                                          aaCTGACCGTCAACGCCCCCTTGGCGCTACGGACCTGGAGTTTACGCGTCGCTTCGGTTAATTGCGAAAATATCTCTTTGATATCGAGGAAAt                               <  1:6173749/93‑1 (MQ=255)

                                                          aaCTGACCGTCAACGCCCCCTTGGCGCTACGGACCTGGAGTTTACGCGTCGCTTCGGTTAATTGCGAAAATATCTCTTTGATATCGAGGAAAt                               <  2:2767404/93‑1 (MQ=255)

                                                          aaCTGACCGTCAACCACCCCTTGGCGCTACGGACCTGGAGTTTACGCGTCGCTTCGGTTAATTGCGAAAATATCTCTTTGATATCGAGGAAAt                               <  2:7012749/93‑1 (MQ=255)

                                                           aCTGACCGTCAACGCCCCCTTGGCGCTACGGACCTGGAGTTTACGCGTCGCTTAGGTTAATTGCGAAAATATCTCTTTGATATCGAGGAAATa                              <  1:3847676/93‑1 (MQ=255)

                                                            cTGACCGTCAACGCCCCCTTGGCGCTACGGACCTGGAGTTTACGCGTCGCTTCGGTTAATTGCGAAAATATCTCTTTGATATCGAGGAAATAg                             <  1:5799754/93‑1 (MQ=255)

                                                             tGACCGTCAACGCCCCCTTGGCGCTACGGACCTGGAGTTTACGCGTCGCTTCGGTTAATTGCGAAAATATCTCTTTGATATCGAGGAAATAgt                            >  1:6511472/1‑92 (MQ=255)

                                                             tGACCGTCAACGCCCCCTTGGCGCTACGGACCTGGAGTTTACGCGTCGCTTCGGTTAATTGCGAAAATATCTCTTTGATATCGAGGAAATAGc                            <  1:1224074/93‑1 (MQ=255)

                                                              gACCGTCAACGCCCCCTTGGCGCTACGGACCTGGAGTTTACGCGTCGCTTCGGTTAATTGCGAAAATATCTCTTTGATATCGAGGAAATAGCt                           <  2:1280913/93‑1 (MQ=255)

                                                               aCCGTCAACGCCCCCTTGGCGCTACGGACCTGGAGTTTACGCGTCGCTTCGGTTAATTGCGAAAATATCTCTTTGATATCGAGGAAATAGCtt                          <  1:4925954/93‑1 (MQ=255)

                                                                ccGTCAACGCCCCCTTGGCGCTACGGACCTGGAGTTTACGCGTCGCTTCGGTTAATTGCGAAAATATCTCTTTGATATCGAGGAAATAGCttt                         >  1:1499370/1‑93 (MQ=255)

                                                                    cAACGCCCCCTTGGCGCTACGGACCTGGAGTTTACGCGTCGCTTCGGTTAATTGCGAAAATATCTCTTTGATATCGAGGAAATAGCTTTGccc                     <  1:7282107/93‑1 (MQ=255)

                                                                      aCGCCCCCTTGGCGCTACGGACCTGGAGTTTACGCGTCGCTTCGGTTAATTGCGAAAATATCTCTTTGATATCGAGGAAATAGCTTTGCCCtt                   >  2:7203808/1‑93 (MQ=255)

                                                                      aCGCCCCCTTGGCGCTACGGACCTGGAGTTTACGCGTCGCTTCGGTTAATTGCGAAAATATCTCTTTGATATCGAGGAAATAGCTTTGCCCtt                   >  1:2692590/1‑93 (MQ=255)

                                                                       cGCCCCCTTGGCGCTACGGACCTGGAGTTTACGCGTCGCTTCGGTTAATTGCGAAAATATCTCTTTGATATCGAGGAAATAGCTTTGCCCTTc                  <  2:4508456/93‑1 (MQ=255)

                                                                         cccccTTGGCGCTACGGACCTGGAGTTTACGCGTCGCTTCGGTTAATTGCGAAAATATCTCTTTGATATCGAGGAAATAGCTTTGCCCTTCCt                >  1:596609/1‑93 (MQ=255)

                                                                         cccccTTGGCGCTACGGACCTGGAGTTTACGCGTCGCTTCGGTTAATTGCGAAAATATCTCTTTGATATCGAGGAAATAGCTTTGCCCTTCCt                >  1:6043876/1‑93 (MQ=255)

                                                                         cccccTTGGCGCTACGGACCTGGAGTTTACGCGTCGCTTCGGTTAATTGCGAAAATATCTCTTTGATATCGAGGAAATAGCTTTGCCCTTCCt                >  1:4416366/1‑93 (MQ=255)

                                                                          ccccTTGGCGCTACGGACCTGGAGTTTACGCGTCGCTTCGGTTAATTGCGAAAATATCTCTTTGATATCGAGGAAATAGCTTTGCCCTTCCTc               >  2:2418370/1‑93 (MQ=255)

                                                                          ccccTTGGCGCTACGGACCTGGAGTTTACGCGTCGCTTCGGTTAATTGCGAAAATATCTCTTTGATATCGAGGAAATAGCTTTGCCCTTCCTc               <  2:787555/93‑1 (MQ=255)

                                                                           cccTTGGCGCTACGGACCTGGAGTTTACGCGTCGCTTCGGTTAATTGCGAAAATATCTCTTTGATATCGAGGAAATAGCTTTGCCCTTCCTCg              >  2:5306802/1‑93 (MQ=255)

                                                                            ccTTGGCGCTACGGACCTGGAGTTTACGCGTCGCTTCGGTTAATTGCGAAAATATCTCTTTGATATCGAGGAAATAGCTTTGCCCTTCCTCgg             >  1:7660431/1‑93 (MQ=255)

                                                                            ccTTGGCGCTACGGACCTGGAGTTTACGCGTCGCTTCGGTTAATTGCGAAAATATCTCTTTGATATCGAGGAAATAGCTTTGCCCTTCCTCgg             >  2:3708440/1‑93 (MQ=255)

                                                                             cTTGGCGCTACGGACCTGGAGTTTACGCGTCGCTTCGGTTAATTGCGAAAATATCTCTTTGATATCGAGGAAATAGCTTTGCCCTTCCTCGGt            <  2:1988254/93‑1 (MQ=255)

                                                                              ctGGCGCTACGGACCTGGAGTTTACGCGTCGCTTCGGTTAATTGCGAAAATATCTCTTTGATATCGAGGAAATAGCTTTGCCCTTCCTCGGTc           <  2:6315757/92‑1 (MQ=255)

                                                                               tGGCGCTACGGACCTGGAGTTTACGCGTCGCTTCGGTTAATTGCGAAAATATCTCTTTGATATCGAGGAAATAGCTTTGCCCTTCCTCGGTca          <  2:6601083/93‑1 (MQ=255)

                                                                               tGGCGCTACGGACCTGGAGTTTACGCGTCGCTTCGGTTAATTGCGAAAATATCTCTTTGATATCGAGGAAATAGCTTTGCCCTTCCTCGGTca          >  1:5504303/1‑93 (MQ=255)

                                                                                 gcgcTACGGACCTGGAGTTTACGCGTCGCTTCGGTTAATTGCGAAAATATCTCTTTGATATCGAGGAAATAGCTTTGCCCTTCCTCGGTcagc        >  2:4137111/1‑93 (MQ=255)

                                                                                  cgcTACGGACCTGGAGTTTACGCGTCGCTTCGGTTAATTGCGAAAATATCTCTTTGATATCGAGGAAATAGCTTTGCCCTTCCTCGGTcagca       <  1:7126085/93‑1 (MQ=255)

                                                                                  cgcTACGGACCTGGAGTTTACGCGTCGCTTCGGTTAATTGCGAAAATATCTATTTGATATCGAGGAAATAGCTTTGCCCTTCCTCGGTcagca       <  2:1527258/93‑1 (MQ=255)

                                                                                      aCGGACCTGGAGTTTACGCGTCGCTTCGGTTAATTGCGAAAATATCTCTTTGATATCGAGGAAATAGCTTTGCCCTTCCTCGGTCAGCAGGAg   <  1:2776587/93‑1 (MQ=255)

                                                                                      aCGGACCTGGAGTTTACGCGTCGCTTCGGTTAATTGCGAAAATATCTCTTTGATATCGAGGAAATAGCTTTGCCCTTCCTCGGTCAGCAGGAg   <  1:5700083/93‑1 (MQ=255)

GCTGAATTAAAGCTGGAAAGTCGCGGAACCAACCAATGAATGGCGAAACTGGGGAGTAAACTGACCGTCAACGCCCCCTTGGCGCTACGGGCCTGGAGTTTACGCGTCGCTTCGGTTAATTGCGAAAATATCTCTTTGATATCGAGGAAATAGCTTTGCCCTTCCTCGGTCAGCAGGAGT  >  NC_000913/2940234‑2940413

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 20 ≤` `ATCG/ATCG` `< 29 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`

GATK/CNVnator alignment

BRESEQ :: bam2aln output

TAAGCTGAATTAAAGCTGGAAAGTCGCGGAACCAACCAATGAATGGCGAAACTGGGGAGTAAACTGACCGTCAACG‑CCCCCTTGGCGCTACGGGCCTGGAGTTTACGCGTCGCTTCGGTTAATTGCGAAAATATCTCTTTGATATCGAGGAAATAGCTTTGCCCTTCCTCGGTCAGCAGGAGTGAAC  >  NC_000913/2940231‑2940417

TAAGCTGAATTAAAGCTGGAAAGTCGCGGAACCAACCAATGAATGGCGAAACTGGGGAGTAAACTGACCGTCAACG‑CCCCCTTGGCGCTACGGA                                                                                               >  SRR4302543.3084955/1‑94 (MQ=60)

   GCTGAATTAAAGCTGGAAAGTCGCGGAACCAACCAATGAATGGCGAAACTGGGGAGTAAACTGACCGTCAACG‑CCCCCTTGGCGCTACGGACCT                                                                                            >  SRR4302543.3098116/1‑94 (MQ=60)

   GCTGAATTAAAGCTGGAAAGTCGCGGAACCAACCAATGAATGGCGAAACTGGGGAGTAAACTGACCGTCAACG‑CCCCCTTGGCGCTACGGACCT                                                                                            <  SRR4302543.1117259/94‑1 (MQ=60)

   GCTGAATTAAAGCTGGAAAGTCGCGGAACCAACCAATGAATGGCGAAACTGGGGAGTAAACTGACCGTCAACG‑CCCCCTTGGCGCTACGGACCT                                                                                            >  SRR4302543.2322792/1‑94 (MQ=60)

   GCTGAATTAAAGCTGGAAAGTCGCGGAACCAACCAATGAATGGCGAAACTGGGGAGTAAACTGACCGTCAACG‑CCCCCTTGGCGCTACGGACCT                                                                                            >  SRR4302543.7136855/1‑94 (MQ=60)

    cacaatacaagcgGGAAAGTCGCGGAACCAACCAAGGAATGGCGAAACTGGGGAGTAACCTGACCGTCAACG‑CCCCCTTGGCGCTACGGACCTG                                                                                           <  SRR4302543.1790915/81‑1 (MQ=60)

     TGAATTAAAGCTGGAAAGTCGCGGAACCAACCAATGAATGGCGAAACTGGGGAGTAAACTGACCGTCAACG‑CCCCCTTGGCGCTACGGACCTGG                                                                                          >  SRR4302543.2006075/1‑94 (MQ=60)

     TGAATTAAAGCTGGAAAGTCGCGGAACCAACCAATGAATGGCGAAACTGGGGAGTAAACTGACCGTCAACG‑CCCCCTTGGCGCTACGGACCTGG                                                                                          <  SRR4302543.4921859/94‑1 (MQ=60)

      GAATTAAAGCTGGAAAGTCGCGGAACCAACCAATGAATGGCGAAACTGGGGAGTAAACTGACCGTCAACG‑CCCCCTTGGCGCTACGGACCTGGA                                                                                         >  SRR4302543.2872606/1‑94 (MQ=60)

      GAATTAAAGCTGGAAAGTCGCGGAACCAACCAATGAATGGCGAAACTGGGGAGTAAACTGACCGTCAACG‑CCCCCTTGGCGCTACGGACCTGGA                                                                                         <  SRR4302543.4030397/94‑1 (MQ=60)

       AATTAAAGCTGGAAAGTCGCGGAACCAACCAATGAATGGCGAAACTGGGGAGTAAACTGACCGTCAACG‑CCCCCTTGGCGCTACGGACCTGGAG                                                                                        <  SRR4302543.6615085/94‑1 (MQ=60)

        ATTAAAGCTGGAAAGTCGCGGAACCAACCAATGAATGGCGAAACTGGGGAGTAAACTGACCGTCAACG‑CCCCCTTGGCGCTACGGACCTGGAGT                                                                                       <  SRR4302543.5080319/94‑1 (MQ=60)

        ATTAAAGCTGGAAAGTCGCGGAACCAACCAATGAATGGCGAAACTGGGGAGTAAACTGACCGTCAACG‑CCCCCTTGGCGCTACGGACCTGGAGT                                                                                       <  SRR4302543.5557531/94‑1 (MQ=60)

         TTAAAGCTGGAAAGTCGCGGAACCAACCAATGAATGGCGAAACTGGGGAGTAAACTGACCGTCAACG‑CCCCCTTGGCGCTACGGACCTGGAGTT                                                                                      >  SRR4302543.2999942/1‑94 (MQ=60)

            AAGCTGGAAAGTCGCGGAACCAACCAATGAATGGCGAAACTGGGGAGTAAACTGACCGTCAACG‑CCCCCTTGGCGCTGCGGACCTGGAGTTTAC                                                                                   <  SRR4302543.4056588/94‑1 (MQ=60)

            AAGCTGGAAAGTCGCGGAACCAACCAATGAATGGCGAAACTGGGGAGTAAACTGACCGTCAACG‑CCCCCTTGGCGCTACGGACCTGGAGTTTAC                                                                                   <  SRR4302543.4492440/94‑1 (MQ=60)

            AAGCTGGAAAGTCGCGGAACCAACCAATGAATGGCGAAACTGGGGAGTAAACTGACCGTCAACG‑CCCCCTTGGCGCTACGGACCTGGAGTTTAC                                                                                   <  SRR4302543.281620/94‑1 (MQ=60)

             AGCTGGAAAGTCGCGGAACCAACCAATGAATGGCGAAACTGGGGAGTAAACTGACCGTCAACG‑CCCCCTTGGCGCTACGGACCTGGAGTTTACG                                                                                  >  SRR4302543.6382310/1‑94 (MQ=60)

               CTGGAAAGTCGCGGAACCAACCAATGAATGGCGAAACTGGGGAGTAAACTGACCGTCAACG‑CCCCCTTGGCGCTACGGACCTGGAGTTTACGCG                                                                                >  SRR4302543.4818008/1‑94 (MQ=60)

                TGGAAAGTCGCGGAACCAACCAATGAATGGCGAAACTGGGGAGTAAACTGACCGTCAACG‑CCCCCTTGGCGCTACGGACCTGGCGTTTACGCGT                                                                               >  SRR4302543.3984677/1‑94 (MQ=60)

                TGGAAAGTCGCGGAACCAACCAATGAATGGCGAAACTGGGGAGTAAACTGACCGTCAACG‑CCCCCTTGGCGCTACGGACCTGGAGTTTACGCGT                                                                               >  SRR4302543.3069616/1‑94 (MQ=60)

                TGGAAAGTCGCGGAACCAACCAATGAATGGCGAAACTGGGGAGTAAACTGACCGTCAACG‑CCCCCTTGGCGCTACGGACCTGGAGTTTACGCGT                                                                               >  SRR4302543.5001803/1‑94 (MQ=60)

                TGGAAAGTCGCGGAACCAACCAATGAATGGCGAAACTGGGGAGTAAACTGACCGTCAACG‑CCCCCTTGGCGCTACGGACCTGGAGTTTACGCGT                                                                               >  SRR4302543.3984448/1‑94 (MQ=60)

                TGGAAAGTCGCGGAACCAACCAATGAATGGCGAAACTGGGGAGTAAACTGACCGTCAACG‑CCCCCTTGGCGCTACGGACCTGGAGTTTACGCGT                                                                               >  SRR4302543.1141981/1‑94 (MQ=60)

                 GGAAAGTCGCGGAACCAACCAATGAATGGCGAATCTGGGGAGTAAACTGACCGTCAACG‑CCCCCTTGGCGCTACGGACCTGGAGTTTACGCGTC                                                                              <  SRR4302543.7725760/94‑1 (MQ=60)

                 GGAAAGTCGCGGAACCAACCAATGAATGGCGAAACTGGGGAGTAAACTGACCGTCAACG‑CCCCCTTGGCGCTACGGACCTGGAGTTTACGCGTC                                                                              >  SRR4302543.3701643/1‑94 (MQ=60)

                  GAAAGTCGCGGAACCAACCAATGAATGGCGAAACTGGGGAGTAAACTGACCGTCAACG‑CCCCCTTGGCGCTACGGACCTGGAGTTTACGCGTCG                                                                             <  SRR4302543.3485062/94‑1 (MQ=60)

                  GAAAGTCGCGGAACCAACCAATGAATGGCGAAACTGGGGAGTAAACTGACCGTCAACG‑CCCCCTTGGCGCTACGGACCTGGAGTTTACGCGTCG                                                                             <  SRR4302543.2157060/94‑1 (MQ=60)

                  GAAAGTCGCGGAACCAACCAATGAATGGCGAAACTGGGGAGTAAACTGACCGTCAACG‑CCCCCTTGGCGCTACGGACCTGGAGTTTACGCGTCG                                                                             <  SRR4302543.6729441/94‑1 (MQ=60)

                  GAAAGTCGCGGAACCAACCAATGAATGGCGAAACTGGGGAGGAAACTGACCGTCAACG‑CCCCCTTGGCGCTACGGACCTGGAGTTTACGCGTCG                                                                             <  SRR4302543.2325874/94‑1 (MQ=60)

                    AAGTCGCGGAACCAACCAATGAATGGCGAAACTGGGGAGTAAACTGACCGTCAACG‑CCCCCTTGGCGCTACGGACCTGGAGTTTACGCGTCGCT                                                                           >  SRR4302543.7775075/1‑94 (MQ=60)

                     AGTCGCGGAACCAACCAATGAATGGCGAAACTGGGGAGTAAACTGACCGTCAACG‑CCCCCTTGGCGCTACGGACCTGGAGTTTACGCGTCGCCT                                                                          >  SRR4302543.7066925/1‑94 (MQ=60)

                      ATCGCGGAACCAACCAATGAATGGCGAAACTGGGGAGTAAACTGACCGTCAACG‑CCCCCTTGGCGCTACGGACCTGGAGTTTACGCGTCGCTTC                                                                         <  SRR4302543.4354028/94‑1 (MQ=60)

                       TCGCGGAACCAACCAATGAATGGCGAAACTGGGGAGTAAACTGACCGTCAACG‑CCCCCTTGGCGCTACGGACCTGGAGTTTACGCGTCGCTTCG                                                                        <  SRR4302543.3908985/94‑1 (MQ=60)

                       TCGCGGAACCAACCAATGAATGGCGAAACTGGGGAGTAAACTGACCGTCAACG‑CCCCCTTGGCGCTACGGACCTGGAGTTTACGCGTCGCTTCG                                                                        <  SRR4302543.7249631/94‑1 (MQ=60)

                       TCGCGGAACCAACCAATGAATGGCGAAACTGGGGAGTAAACTGACCGTCAACG‑CCCCCTTGGCGCTACGGACCTGGAGTTTACGCGTCGCTTCG                                                                        <  SRR4302543.7491318/94‑1 (MQ=60)

                        CGCGGAACCAACCAATGAATGGCGAAACTGGGGAGTAAACTGACCGTCAACG‑CCCCCTTGGCGCTACGGACCTGGAGTTTACGCGTCGCTTCGG                                                                       >  SRR4302543.5054669/1‑94 (MQ=60)

                         GCGGAACCAACCAATGAATGGCGAAACTGGGGAGTAAACTGACCGTCAACG‑CCCCCTTGGCGCTACGGACCTGGAGTTTACGCGTCGCTTCGGT                                                                      >  SRR4302543.6483729/1‑94 (MQ=60)

                         GCGGAACCAACCAATGAATGGCGAAACTGGGGAGTAAACTGACCGTCAACG‑CCCCCTTGGCGCTACGGACCTGGAGTTTACGCGTCGCTTCGGT                                                                      >  SRR4302543.7586836/1‑94 (MQ=60)

                           GGAACCAACCAATGAATGGCGAAACTGGGGAGTAAACTGACCGTCAACG‑CCCCCTTGGCGCTACGGACCTGGAGTTTACGCGTCGCTTCGGTTA                                                                    >  SRR4302543.2976501/1‑94 (MQ=60)

                           GGAACCAACCAATGAATGGCGAAACTGGGGAGTAAACTGACCGTCAACG‑CCCCCTTGGCGCTACGGACCTGGAGTTTACGCGTCGCTTCGGTTA                                                                    >  SRR4302543.3849777/1‑94 (MQ=60)

                            GAACCAACCAATGAATGGCGAAACTGGGGAGTAAACTGACCGTCAACG‑CCCCCTTGGCGCTACGGACCTGGAGTTTACGCGTCGCTTCGGTTAA                                                                   >  SRR4302543.6810177/1‑94 (MQ=60)

                            GAACCAACCAATGAATGGCGAAACTGGGGAGTAAACTGACCGTCAACG‑CCCCCTTGGCGCTACGGACCTGGAGTTTACGCGTCGCTTCGGTTAA                                                                   <  SRR4302543.5411414/94‑1 (MQ=60)

                             AACCAACCAATGAATGGCGAAACTGGGGAGTAAACTGACCGTCAACG‑CCCCCTTGGCGCTACGGACCTGGAGTTTACGCGTCGCTTCGGTTAAT                                                                  <  SRR4302543.4749521/94‑1 (MQ=60)

                             AACCAACCAATGAATGGCGAAACTGGGGAGTAAACTGACCGTCAACG‑CCCCCTTGGCGCTACGGACCTGGAGTTTACGCGTCGCTTCGGTTAAT                                                                  <  SRR4302543.2121678/94‑1 (MQ=60)

                             AACCAACCAATGAATGGCGAAACTGGGGAGTAAACTGACCGTCAACG‑CCCCCTTGGCGCTACGGACCTGGAGTTTACGCGTCGCTTCGGTTAAT                                                                  <  SRR4302543.6334400/94‑1 (MQ=60)

                              ACCAACCAATGAATGGCGAAACTGGGGAGTAAACTGACCGTCAACG‑CCCCCTTGGCGCTACGGACCTGGAGTTTACGCGTCGCTTCGGTTAATT                                                                 <  SRR4302543.2667571/94‑1 (MQ=60)

                               CCAACCAATGAATGGCGAAACTGGGGAGTAAACTGACCGTCAACG‑CCCCCTTGGCGCTACGGACCTGGAGTTTACGCGTCGCTTCGGTTAATTG                                                                <  SRR4302543.6657697/94‑1 (MQ=60)

                               CCAACCAATGAATGGCGAAACTGGGGAGTAAACTGACCGTCAACG‑CCCCCTTGGCGCTACGGACCTGGAGTTTACGCGTCGCTTCGGTTAATTG                                                                >  SRR4302543.6924039/1‑94 (MQ=60)

                               CCAACCAATGAATGGCGAAACTGGGGAGTAAACTGACCGTCAACG‑CCCCCTTGGCGCTACGGACCTGGAGTTTACGCGTCGCTTCGGTTAATTG                                                                >  SRR4302543.6451771/1‑94 (MQ=60)

                               ACAACCAATGAATGGCGAAACTGGGGAGTAAACTGACCGTCAACG‑CCCCCTTGGCGCTACGGACCTGGAGTTTACGCGTCGCTTCGGTTAATTG                                                                <  SRR4302543.2669047/94‑1 (MQ=60)

                                CAACCAATGAATGGCGAAACTGGGGAGTAAACTGACCGTCAACG‑CCCCCTTGGCGCTACGGACCTGGAGTTTACGCGTCGCTTCGGTTAATTGG                                                               >  SRR4302543.2436368/1‑94 (MQ=60)

                                CAACCAATGAATGGCGAAACTGGGGAGTAAACTGACCGTCAACG‑CCCCCTTGGCGCTACGGACCTGGAGTTTACGCGTCGCTTCGGTTAATTGC                                                               >  SRR4302543.1967685/1‑94 (MQ=60)

                                CAACCAATGAATGGCGAAACTGGGGAGTAAACTGACCGTCAACG‑CCCCCTTGGCGCTACGGACCTGGAGTTTACGCGTCGCTTCGGTTAATTGC                                                               <  SRR4302543.5026872/94‑1 (MQ=60)

                                CAACCAATGAATGGCGAAACTGGGGAGTAAACTGACCGTCAACG‑CCCCCTTGGCGCTACGGACCTGGAGTTTACGCGTCGCTTCGGTTAATTGC                                                               >  SRR4302543.7932064/1‑94 (MQ=60)

                                CAACCAATGAATGGCGAAACTGGGGAGTAAACTGACCGTCAACG‑CCCCCTTGGCGCTACGGACCTGGAGTTTACGCGTCGCTTCGGTTAATTGC                                                               >  SRR4302543.7932063/1‑94 (MQ=60)

                                CAACCAATGAATGGCGAAACTGGGGAGTAAACTGACCGTCAACG‑CCCCCTTGGCGCTACGGACCTGGAGTTTACGCGTCGCTTCGGTTAATTGC                                                               >  SRR4302543.7221798/1‑94 (MQ=60)

                                 AACCAATGAATGGCGAAACTGGGGAGTAAACTGACCGTCAACG‑CCCCCTTGGCGCTACGGACCTGGAGTTTACGCGTCGCTTCGGTTAATTGCG                                                              <  SRR4302543.4666841/94‑1 (MQ=60)

                                  ACCAATGAATGGCGAAACTGGGGAGTAAACTGACCGTCAACG‑CCCCCTTGGCGCTACGGACCTGGAGTTTACGCGTCGCTTCGGTTAATTGCGA                                                             >  SRR4302543.977164/1‑94 (MQ=60)

                                   CCAATGAATGGCGAAACTGGGGAGTAAACTGACCGTCAACG‑CCCCCTTGGCGCTACGGACCTGGAGTTTACGCGTCGCTTCGGTTAATTGCGAA                                                            <  SRR4302543.1944208/94‑1 (MQ=60)

                                   CCAATGAATGGCGAAACTGGGGAGTAAACTGACCGTCAACG‑CCCCCTTGGCGCTACGGACCTGGAGTTTACGCGTCGCTTCGGTTAATTGCGAA                                                            >  SRR4302543.3568805/1‑94 (MQ=60)

                                    CAATGAATGGCGAAACTGGGGAGTAACCTGACCGTCAACG‑CCCCCTTGGCGCTACGGACCTGGAGTTTACGCGTCGCTTCGGTTAATTGCGAAA                                                           <  SRR4302543.6858057/94‑1 (MQ=60)

                                    CAATGAATGGCGAAACTGGGGAGTAAACTGACCGTCAACG‑CCCCCTTGGCGCTACGGACCTGGAGTTTACGCGTCGCTTCGGTTAATTGCGAAA                                                           >  SRR4302543.2500949/1‑94 (MQ=60)

                                     AATGAGTGGCGAAACTGGGGAGTAAACTGACCGTCAACG‑CCCCCTGGGCGCTACGGACCTGGAGTTTACGCGTCGCTTCGGTTAATTGCGAAAA                                                          <  SRR4302543.7523143/94‑1 (MQ=60)

                                     AATGAATGGCGAAACTGGGGAGTAAACTGACCGTCAACG‑CCCCCTTGGCGCTACGGACCTGGAGGTTACGCGTCGCTTCGGTTAATTGCGAAAA                                                          >  SRR4302543.3356990/1‑94 (MQ=60)

                                      ATGAATGGCGAAACTGGGGAGTAAACTGACCGTCAACG‑CCCCCTTGGCGCTACGGACCTGGAGTTTACGCGTCGCTTCGGTTAATTGCGAAAAT                                                         <  SRR4302543.3801425/94‑1 (MQ=60)

                                      ATGAATGGCGAAACTGGGGAGTAAACTGACCGTCAACG‑CCCCCTTGGCGCTACGGACCTGGAGTTTACGCGTCGCTTCGGTTAATTGCGAAAAT                                                         <  SRR4302543.3649113/94‑1 (MQ=60)

                                      ATGAATGGCGAAACTGGGGAGTAAACTGACCGTCAACG‑CCCCCTTGGCGCTACGGACCTGGAGTTTACGCGTCGCTTCGGTTAATTGCGAAAAT                                                         >  SRR4302543.4599252/1‑94 (MQ=60)

                                       TGAATGGCGAAACTGGGGAGTAAACTGACCGTCAACG‑CCCCCTTGGCGCTACGGACCTGGAGTTTACGCGTCGCTTCGGTTAATTGCGAAAATA                                                        <  SRR4302543.5370849/94‑1 (MQ=60)

                                        GAATGGCGCACCTGGGGAGTACCCTGCCCGTCAGCG‑CCCCCTTGGCGCTACGGACCTGGCGTTTACGCGTCGCTTCGGTTAATTGCGCAAATGT                                                       <  SRR4302543.7114581/94‑1 (MQ=48)

                                        GAATGGCGAAACTGGGGAGTAAACTGACCGTCAACG‑CCCCCTTGGCGCTACGGACCTGGAGTTTACGCGTCGCTTCGGTTAATTGCGAAAATAT                                                       <  SRR4302543.4320523/94‑1 (MQ=60)

                                        GAATGGCGAAACTGGGGAGTAAACTGACCGTCAACG‑CCCCCTTGGCGCTACGGACCTGGAGTTTACGCGTCGCTTCGGTTAATTGCGAAAATAT                                                       <  SRR4302543.7146766/94‑1 (MQ=60)

                                        GAATGGCGAAACTGGGGAGTAAACTGACCGTCAACG‑CCCCCTTGGCGCTACGGACCTGGAGTTTACGCGTCGCTTCGGTTAATTGCGAAAATAT                                                       <  SRR4302543.6140491/94‑1 (MQ=60)

                                        GAATGGCGAAACTGGGGAGTAAACTGACCGTCAACG‑CCCCCTTGGCGCTACGGACCTGGAGTTTACGCGTCGCTTCGGTTAATTGCGAAAATAT                                                       <  SRR4302543.7146767/94‑1 (MQ=60)

                                         AATGGCGAAACTGGGGAGTAAACTGACCGTCAACG‑CCCCCTTGGCGCTACGGACCTGGAGTTTACGCGTCGCTTCGGTTAATTGCGAAAATATC                                                      >  SRR4302543.2844363/1‑94 (MQ=60)

                                         AATGGCGAAACTGGGGAGTAAACTGACCGTCAACG‑CCCCCTTGGCGCTACGGACCTGGAGTTTACGCGTCGCTTCGGTTAATTGCGAAAATATC                                                      >  SRR4302543.5847993/1‑94 (MQ=60)

                                         AATGGCGAAACTGGGGAGTAAACTGACCGTCAACG‑CCCCCTTGGCGCTACGGACCTGGAGTTTACGCGTCGCTTCGGTTAATTGCGAAAATATC                                                      <  SRR4302543.3720727/94‑1 (MQ=60)

                                          ATGGCGAAACTGGGGAGTAAACTGACCGTCAACG‑CCCCCTTGGCGCTACGGACCTGGAGTTTACGCGTCGCTTCGGTTAATTGCGAAAATATCT                                                     >  SRR4302543.3392694/1‑94 (MQ=60)

                                           TGGCGAAACTGGGGAGTAAACTGACCGGCAACG‑CCCCCTTGGCGCTACGGACCTGGAGTTAACGCGTCGCTTCGGTTAATTGCGAAAATATCTC                                                    <  SRR4302543.5007654/94‑1 (MQ=60)

                                            GGCGAAACTGGGGAGTAAACTGACCGTCAACG‑CCCCCTTGGCGCTACGGACCTGGAGTTTACGCGTCGCTTCGGTTAATTGCGAAAATATCTCT                                                   <  SRR4302543.211083/94‑1 (MQ=60)

                                             GCGAAACTGGGGAGTAAACTGACCGTCAACG‑CCCCCTTGGCGCTACGGACCTGGAGTTTGCGCGTCGCTTCGGTTAATTGCGAAAATATCTCTT                                                  <  SRR4302543.3961383/94‑1 (MQ=60)

                                             GCGAAACTGGGGAGTAAACTGACCGTCAACG‑CCCCCTTGGCGCTACGGACCTGGAGTTTACGCGTCGCTTCGGTTAATTGCGAAAATATCTCTT                                                  <  SRR4302543.1025791/94‑1 (MQ=60)

                                              CGAAACTGGGGAGTAAACTGACCGTCAACG‑CCCCCTTGGCGCTACGGACCTGGAGTTTACGCGTCGCTTCGGTTAATTGCGAAAATATCTCTTT                                                 <  SRR4302543.2813493/94‑1 (MQ=60)

                                              CGAAACTGGGGAGTAAACTGACCGTCAACG‑CCCCCTTGGCGCTACGGACCTGGAGTTTACGCGTCGCTTCGGTTAATTGCGAAAATATCTCTTT                                                 >  SRR4302543.4289435/1‑94 (MQ=60)

                                               GAAACTGGGGAGTAAACTGACCGTCAACG‑CCCCCTTGGCGCTACGGACCTGGAGTTTACGCGTCGCTTCGGTTAATTGCGAAAATATCTCTTTG                                                <  SRR4302543.2973708/94‑1 (MQ=60)

                                               GAAACTGGGGAGTAAACTGACCGTCAACG‑CCCCCTTGGCGCTACGGACCTGGAGTTTACGCGTCGCTTCGGTTAATTGCGAAAATATCTCTTTG                                                <  SRR4302543.6004814/94‑1 (MQ=60)

                                               GAAACTGGGGAGTAAACTGACCGTCAACG‑CCCCCTTGGCGCTACGGACCTGGAGTTTACGCGTCGCTTCGGTTAATTGCGAAAATATCTCTTTG                                                >  SRR4302543.1362298/1‑94 (MQ=60)

                                               GAAACTGGGGAGTAAACTGACCGTCAACG‑CCCCCTTGGCGCTACGGACCTGGAGTTTACGCGTCGCTTCGGTTAATTGCGAAAATATCTCTTTG                                                <  SRR4302543.5176206/94‑1 (MQ=60)

                                                AAACTGGGGAGTAAACTGACCGTCAACG‑CCCCCTTGGCGCTACGGACCTGGAGTTTACGCGTCGCTTCGGTTAATTGCGAAAATATCTCTTTGA                                               <  SRR4302543.5530529/94‑1 (MQ=60)

                                                 AACTGGGGAGTAAACTGACCGTCAACG‑CCCCCTTGGCGCTACGGACCTGGAGTTTACGCGTCGCTTCGGTTAATTGCGAAAATATCTCTTTGAT                                              >  SRR4302543.3524338/1‑94 (MQ=60)

                                                 AACTGGGGAGTAAACTGACCGTCAACG‑CCCCCTTGGCGCTACGGACCTGGAGTTTACGCGTCGCTTCGGTTAATTGCGAAAATATCTCTTTGAT                                              <  SRR4302543.1485623/94‑1 (MQ=60)

                                                  ACTGGGGCGTAAACTGACCGTCAACG‑CCGCCTTGTCGCTACGGACCTGGAGTTTACGCGTCGCTTCGGTTAATTGCGAAAATATCTCTTTGATA                                             <  SRR4302543.3692868/94‑1 (MQ=60)

                                                  ACTGGGGAGTAAACTGACCGTCAACG‑CCCCCTTGGCGCTACGGACCTGGAGTTTACGCGTCGCTTCGGTTAATTGCGAAAATATCTCTTTGATA                                             <  SRR4302543.3163842/94‑1 (MQ=60)

                                                  ACTGGGGAGTAAACTGACCGTCAACG‑CCCCCTTGGCGCTACGGACCTGGAGTTTACGCGTCGCTTCGGTTAATTGCGAAAATATCTCTTTGATA                                             <  SRR4302543.3692867/94‑1 (MQ=60)

                                                  ACTGGGGAGTAAACTGACCGTCAACG‑CCCCCTTGGCGCTACGGACCTGGAGTTTACGCGTCGCTTCGGTTAATTGCGAAAATATCTCTTTGATA                                             <  SRR4302543.3163843/94‑1 (MQ=60)

                                                   ctgggaaagAAACTGACCGGCAACG‑CCCCCTTGGCGCTACGGACCTGGAGTTTACGCGTCGCTTCGGTTAATTGCGAAAATATCTCTTTGATAT                                            <  SRR4302543.2672562/85‑1 (MQ=60)

                                                   CTGGGGAGTAAACTGACCGTCAACG‑CCCCCTTGGCGCTACGGACCTGGAGTTTACGCGTCGCTTCGGTTAATTGCGAAAATATCTCTTTGATAT                                            >  SRR4302543.1021263/1‑94 (MQ=60)

                                                   CTGGGGAGTAAACTGACCGTCAACG‑CCCCCTTGGCGCTACGGACCTGGAGTTTACGCGTCGCTTCGGTTAATTGCGAAAATATCTCTTTGATAT                                            <  SRR4302543.2672561/94‑1 (MQ=60)

                                                    TGGGGAGTAAACTGACCGTCAACG‑CCCCCTTGGCGCTACGGACCTGGAGTTTACGCGTCGCTTCGGTTAATTGCGAAAATATCTCTTTGGTATC                                           <  SRR4302543.108521/94‑1 (MQ=60)

                                                    TGGGGAGTAAACTGACCGTCAACG‑CCCCCTTGGCGCTACGGACCTGGAGTTTACGCGTCGCTTCGGTTAATTGCGAAAATATCTCTTTGATATC                                           >  SRR4302543.7635257/1‑94 (MQ=60)

                                                     GGGGAGTAAACTGACCGTCAACG‑CCCCCTTGGCGCTACGGACCTGGAGTTTACGCGTCGCTTCGGTTAATTGCGAAAATATCTCTTTGATATCG                                          <  SRR4302543.6931522/94‑1 (MQ=60)

                                                     GGGGAGTAAACTGACCGTCAACG‑CCCCCTTGGCGCTACGGACCTGGAGTTTACGCGTCGCTTCGGTTAATTGCGAAAATATCTCTTTGATATCG                                          <  SRR4302543.911452/94‑1 (MQ=60)

                                                     GGGGAGTAAACTGACCGTCAACG‑CCCCCTTGGCGCTACGGACCTGGAGTTTACGCGTCGCTTCGGTTAATTGCGAAAATATCTCTTTGATATCG                                          <  SRR4302543.7961817/94‑1 (MQ=60)

                                                       GGAGTAAACTGACCGTCAACG‑CCCCCTTGGCGCTACGGACCTGGAGTTTACGCGTCGCTTCGGTTAATTGCGAAAATATCTCTTTGATATCGAG                                        >  SRR4302543.5384931/1‑94 (MQ=60)

                                                        GAGTAAACTGACCGTCAACG‑CCCCCTTGGCGCTACGGACCTGGAGTTTACGCGTCGCTTCGGTTAATTGCGAAAATATCTCTTTGATATCGAGG                                       <  SRR4302543.6554678/94‑1 (MQ=60)

                                                        GAGTAAACTGACCGTCAACG‑CCCCCTTGGCGCTACGGACCTGGAGTTTACGCGTCGCTTCGGTTAATTGCGAAAATATCTCTTTGATATCGAGG                                       >  SRR4302543.542148/1‑94 (MQ=60)

                                                         AGTAAACTGGCCGTCAACG‑CCCCCTTGGCGCTACGGACCTGGAGTTTACGCGTCGCTTCGGTTAATTGCGAAAATATCTCTTTGATATCGAGGA                                      <  SRR4302543.7282717/94‑1 (MQ=60)

                                                         AGTAAACTGACCGTCAACG‑CCCCCTTGGCGCTACGGACCTGGAGTTTACGCGTCGCTTCGGTTAATTGCGAAAATATCTCTTTGATATCGAGGA                                      >  SRR4302543.2688687/1‑94 (MQ=60)

                                                         AGTAAACTGACCGTCAACG‑CCCCCTTGGCGCTACGGACCTGGAGTTTACGCGTCGCTTCGGTTAATTGCGAAAATATCTCTTTGATATCGAGGA                                      >  SRR4302543.3576428/1‑94 (MQ=60)

                                                         AGTAAACTGACCGTCAACG‑CCCCCTTGGCGCTACGGACCTGGAGTTTACGCGTCGCTTCGGTTAATTGCGAAAATATCTCTTTGATATCGAGGA                                      >  SRR4302543.1470355/1‑94 (MQ=60)

                                                          GTAAACTGACCGTCAACG‑CCCCCTTGGCGCTACGGACCTGGAGTTTACGCGTCGCTTCGGTTAATTGCGAAAATATCTCTTTGATATCGAGGAA                                     >  SRR4302543.2099931/1‑94 (MQ=60)

                                                          GTAAACTGACCGTCAACG‑CCCCCTTGGCGCTACGGACCTGGAGTTTACGCGTCGCTTCGGTTAATTGCGAAAATATCTCTTTGATATCGAGGAA                                     >  SRR4302543.536939/1‑94 (MQ=60)

                                                          GTAAACTGACCGTCAACG‑CCCCCTTGGCGCTACGGACCTGGAGTTTACGCGTCGCTTCGGTTAATTGCGAAAATATCTCTTTGATATCGAGGAA                                     >  SRR4302543.536940/1‑94 (MQ=60)

                                                           GAAACTGACCGTCAACG‑CCCCCTTGGCGCTACGGACCTGGAGTTTACGCGTCGCTTCGGTTAATTGCGAAAATATCTCTTTGATATCGAGGAAA                                    <  SRR4302543.2796831/94‑1 (MQ=60)

                                                            AAACTGACCGTCAACG‑CCCCCTTGGCGCTACGGACCTGGAGTTTACGCGTCGCTTCGGTTAATTGCGAAAATATCTCTTTGATATCGAGGAAAT                                   <  SRR4302543.2635468/94‑1 (MQ=60)

                                                            AAACTGACCGTCAACG‑CCCCCTTGGCGCTACGGACCTGGAGTTTACGCGTCGCTTCGGTTAATTGCGAAAATATCTCTTTGATATCGAGGAAAT                                   <  SRR4302543.1599113/94‑1 (MQ=60)

                                                             AACTGACCGTCAACG‑CCCCCTTGGCGCTACGGACCTGGAGTTTACGCGTCGCTTCGGTTAATTGCGAAAATATCTCTTTGATATCGAGGAAATA                                  <  SRR4302543.6232137/94‑1 (MQ=60)

                                                              ACTGACCGTCAACG‑CCCCCTTGGCGCTACGGACCTGGAGTTTACGCGTCGCTTCGGTTAATTGCGAAAATATCTCTTTGATATCGAGGAAATAG                                 <  SRR4302543.2264897/94‑1 (MQ=60)

                                                              ACTGACCGTCAACG‑CCCCCTTGGCGCTACGGACCTGGAGTTTACGCGTCGCTTCGGTTAATTGCGAAAATATCTCTTTGATATCGAGGAAATAG                                 <  SRR4302543.5063215/94‑1 (MQ=60)

                                                              ACTGACCGTCAACG‑CCCCCTTGGCGCTACGGACCTGGAGTTTACGCGTCGCTTCGGTTAATTGCGAAAATATCTCTTTGATATCGAGGAAATAG                                 >  SRR4302543.2558526/1‑94 (MQ=60)

                                                              ACTGACCGTCAACG‑CCCCCTTGGCGCTACGGACCTGGAGTTTACGCGTCGCTTAGGTTAATTGCGAAAATATCTCTTTGATATCGAGGAAATAG                                 <  SRR4302543.3881660/94‑1 (MQ=60)

                                                               CTGACCGTCAACG‑CCCCCTTGGCGCTACGGACCTGGAGTTTACGCGTCGCTTCGGTTAATTGCGAAAATATCTCTTTGATATCGAGGAAATAGT                                >  SRR4302543.6572806/1‑94 (MQ=60)

                                                               CTGACCGTCAACG‑CCCCCTTGGCGCTACGGACCTGGAGTTTACGCGTCGCTTCGGTTAATTGCGAAAATATCTCTTTGATATCGAGGAAATAGC                                <  SRR4302543.3533458/94‑1 (MQ=60)

                                                               CTGACCGTCAACG‑CCCCCTTGGCGCTACGGACCTGGAGTTTACGCGTCGCTTCGGTTAATTGCGAAAATATCTCTTTGATATCGAGGAAATAGC                                <  SRR4302543.5852510/94‑1 (MQ=60)

                                                               CTGACCGTCAACG‑CCCCCTTGGCGCTACGGACCTGGAGTTTACGCGTCGCTTCGGTTAATTGCGAAAATATCTCTTTGATATCGAGGAAATAGC                                >  SRR4302543.4130483/1‑94 (MQ=60)

                                                               CTGACCGTCAACG‑CCCCCTTGGCGCTACGGACCTGGAGTTTACGCGTCGCTTCGGTTAATTGCGAAAATATCTCTTTGATATCGAGGAAATAGC                                <  SRR4302543.7096670/94‑1 (MQ=60)

                                                               CTGACCGTCAACG‑CCCCCTTGGCGCTACGGACCTGGAGTTTACGCGTCGCTTCGGTTAATTGCGAAAATATCTCTTTGATATCGAGGAAATAGC                                >  SRR4302543.6572805/1‑94 (MQ=60)

                                                                TGACCGTCAACG‑CCCCCTTGGCGCTACGGACCTGGAGTTTACGCGTCGCTTCGGTTAATTGCGAAAATATCTCTTTGATATCGAGGAAATAGCT                               <  SRR4302543.1235080/94‑1 (MQ=60)

                                                                TGACCGTCAACG‑CCCCCTTGGCGCTACGGACCTGGAGTTTACGCGTCGCTTCGGTTAATTGCGAAAATATCTCTTTGATATCGAGGAAATAGCT                               <  SRR4302543.914780/94‑1 (MQ=60)

                                                                 GACCGTCAACG‑CCCCCTTGGCGCTACGGACCTGGAGTTTACGCGTCGCTTCGGTTAATTGCGAAAATATCTCTTTGATATCGAGGAAATAGCTT                              >  SRR4302543.5962627/1‑94 (MQ=60)

                                                                  ACCGTCAACG‑CCCCCTTGGCGCTACGGACCTGGAGTTTACGCGTCGCTTCGGTTAATTGCGAAAATATCTCTTTGATATCGAGGAAATAGCTTT                             <  SRR4302543.4970827/94‑1 (MQ=60)

                                                                  ACCGTCAACG‑CCCCCTTGGCGCTACGGACCTGGAGTTTACGCGTCGCTTCGGTTAATTGCGAAAATATCTCTTTGATATCGAGGAAATAGCTTT                             <  SRR4302543.6031298/94‑1 (MQ=60)

                                                                  ACCGTCAACG‑CCCCCTTGGCGCTACGGACCTGGAGTTTACGCGTCGCTTCGGTTAATTGCGAAAATATCTCTTTGATATCGAGGAAATAGCTTT                             >  SRR4302543.1512857/1‑94 (MQ=60)

                                                                   CCGTCAACG‑CCCCCTTGGCGCTACGGACCTGGAGTTTACGCGTCGCTTCGGTTAATTGCGAAAATATCTCTTTGATATCGAGGAAATAGCTTTG                            <  SRR4302543.7665100/94‑1 (MQ=60)

                                                                   CCGTCAACG‑CCCCCTTGGCGCTACGGACCTGGAGTTTACGCGTCGCTTCGGTTAATTGCGAAAATATCTCTTTGATATCGAGGAAATAGCTTTG                            <  SRR4302543.130631/94‑1 (MQ=60)

                                                                   CCGTCAACG‑CCCCCTTGGCGCTACGGACCTGGAGTTTACGCGTCGCTTCGGTTAATTGCGAAAATATCTCTTTGATATCGAGGAAATAGCTTTG                            <  SRR4302543.6253982/94‑1 (MQ=60)

                                                                   CCGTCAACG‑CCCCCGTGGCGCTACGGACCTGGAGTTTACGCGTCGCTTCGGTTAATTGCGAAAATATCTCTTTGATATCAAGGAAATAGCTTTG                            <  SRR4302543.2916346/94‑1 (MQ=60)

                                                                    CGTCAACGCCCCCCTTGGCGCTACGGACCTGGAGTTTACGCGTCGCTTCGGTTAATTGCTAAAATATCTCTTTGATATCGAGGAAATAGCTTTG                            <  SRR4302543.3382641/94‑1 (MQ=60)

                                                                    CGTCAACG‑CCCCCTTGGCGCTACGGACCTGGAGTTTACGCGTCGCTTCGGTTAATTGCGAAAATATCTCTTTGATATCGAGGAAATAGCTTTGC                           <  SRR4302543.2161348/94‑1 (MQ=60)

                                                                     GTCAACG‑CCCCCTTGGCGCTACGGACCTGGAGTTTACGCGTCGCTTCGGTTAATTGCGAAAATATCTCTTTGATATCGAGGAAATAGCTTTGCC                          <  SRR4302543.2773492/94‑1 (MQ=60)

                                                                     GTCAACG‑CCCCCTTGGCGCTACGGACCTGGAGTTTACGCGTCGCTTCGGTTAATTGCGAAAATATCTCTTTGATATCGAGGAAATAGCTTTGCC                          >  SRR4302543.6948778/1‑94 (MQ=60)

                                                                       CAACG‑CCCCCTTGGCGCTACGGACCTGGAGTTTACGCGTCGCTTCGGTTAATTGCGAAAATATCTCTTTGATATCGAGGAAATAGCTTTGCCCT                        <  SRR4302543.7352429/94‑1 (MQ=60)

                                                                       CAACG‑CCCCCTTGGCGCTACGGACCTGGAGTTTACGCGTCGCTTCGGTTAATTGCGAAAATATCTCTTTGATATCGAGGAAATAGCTTTGCCCT                        >  SRR4302543.4853213/1‑94 (MQ=60)

                                                                       CAACG‑CCCCCTTGGCGCTACGGACCTGGAGTTTACGCGTCGCTTCGGTTAATTGCGAAAATATCTCTTTGATATCGAGGAAATAGCTTTGCCCT                        >  SRR4302543.4482169/1‑94 (MQ=60)

                                                                        AACG‑CCCCCTTGGCGCTACGGACCTGGAGTTTACGCGTCGCTTCGGTTAATTGCGAAAATATCTCTTTGATATCGAGGCAATAGCTTTGCCCTT                       >  SRR4302543.3491080/1‑94 (MQ=60)

                                                                        AACG‑CCCCCTTGGCGCTACGGACCTGGAGTTTACGCGTCGCTTCGGTTAATTGCGAAAATATCTCTTTGATATCGAGGAAATAGCTTTGCCCTT                       >  SRR4302543.919779/1‑94 (MQ=60)

                                                                        AACG‑CCCCCTTGGCGCTACGGACCTGGAGTTTACGCGTCGCTTCGGTTAATTGCGAAAATATCTCTTTGATATCGAGGAAATAGCTTTGCCCTT                       >  SRR4302543.2717000/1‑94 (MQ=60)

                                                                          CG‑CCCCCTTGGCGCTACGGACCTGGAGTTTACGCGTCGCTTCGGTTAATTGCGAAAATATCTCTTTGATATCGAGGAAATAGCTTTGCCCTTCC                     <  SRR4302543.7811825/94‑1 (MQ=60)

                                                                          CG‑CCCCCTTGGCGCTACGGACCTGGAGTTTACGCGTCGCTTCGGTTAATTGCGAAAATATCTCTTTGATATCGAGGAAATAGCTTTGCCCTTCC                     <  SRR4302543.7811824/94‑1 (MQ=60)

                                                                           G‑CCCCCTTGGCGCTACGGACCTGGAGTTTACGCGTCGCTTCGGTTAATTGCGAAAATATCTCTTTGATATCGAGGAAATAGCTTTGCCCTTCCT                    >  SRR4302543.1256681/1‑94 (MQ=60)

                                                                           G‑CCCCCTTGGCGCTACGGACCTGGAGTTTACGCGTCGCTTCGGTTAATTGCGAAAATATCTCTTTGATATCGAGGAAATAGCTTTGCCCTTCCT                    <  SRR4302543.1590770/94‑1 (MQ=60)

                                                                           G‑CCCCCTTGGCGCTACGGACCTGGAGTTTACGCGTCGCTTCGGTTAATTGCGAAAATATCTCTTTGATATCGAGGAAATAGCTTTGCCCTTCCT                    <  SRR4302543.1859411/94‑1 (MQ=60)

                                                                           G‑CCCCCTTGGCGCTACGGACCTGGAGTTTACGCGTCGCTTCGGTTAATTGCGAAAATATCTCTTTGATATCGAGGAAATAGCTTTGCCCTTCCT                    >  SRR4302543.4456397/1‑94 (MQ=60)

                                                                           G‑CCCCCTTGGCGCTACGGACCTGGAGTTTACGCGTCGCTTCGGTTAATTGCGAAAATATCTCTTTGATATCGAGGAAATAGCTTTGCCCTTCCT                    >  SRR4302543.602079/1‑94 (MQ=60)

                                                                           G‑CCCCCTTGGCGCTACGGACCTGGAGTTTACGCGTCGCTTCGGTTAATTGCGAAAATATCTCTTTGATATCGAGGAAATAGCTTTGCCCTTCCT                    >  SRR4302543.4747631/1‑94 (MQ=60)

                                                                           G‑CCCCCTTGGCGCTACGGACCTGGAGTTTACGCGTCGCTTCGGTTAATTGCGAAAATATCTCTTTGATATCGAGGAAATAGCTTTGCCCTTCCT                    <  SRR4302543.4488524/94‑1 (MQ=60)

                                                                           G‑CCCCCTTGGCGCTACGGACCTGGAGTTTACGCGTCGCTTCGGTTAATTGCGAAAATATCTCTTTGATATCGAGGAAATAGCTTTGCCCTTCCT                    >  SRR4302543.6101084/1‑94 (MQ=60)

                                                                           G‑CCCCCTTGGCGCTACGGACCTGGAGTTTACGCGTCGCTTCGGTTAATTGCGAAAATATCTCTTTGATATCGAGGAAATAGCTTTGCCCTTCCT                    >  SRR4302543.6204667/1‑94 (MQ=60)

                                                                           G‑CCCCCTTGGCGCTACGGACCTGGAGTTTACGCGTCGCTTCGGTTAATTGCGAAAATATCTATTTGATATCGAGGAAATAGCTTTGCGCTTCCT                    >  SRR4302543.602080/1‑94 (MQ=60)

                                                                             CCCCCTTGGCGCTACGGACCTGGAGTTTACGCGTCGCTTCGGTTAATTGCGAAAATATCTCTTTGATATCGAGGAAATAGCTTTGCCCTTCCTC                   <  SRR4302543.4264793/94‑1 (MQ=60)

                                                                             CCCCCTTGGCGCTACGGACCTGGAGTTTACGCGTCGCTTCGGTTAATTGCGAAAATATCTCTTTGATATCGAGGAAATAGCTTTGCCCTTCCTC                   >  SRR4302543.1175209/1‑94 (MQ=60)

                                                                             CCCCCTTGGCGCTACGGACCTGGAGTTTACGCGTCGCTTCGGTTAATTGCGAAAATATCTCTTTGATATCGAGGAAATAGCTTTGCCCTTCCTC                   <  SRR4302543.7315988/94‑1 (MQ=60)

                                                                             CCCCCTTGGCGCTACGGACCTGGAGTTTACGCGTCGCTTCGGTTAATTGCGAAAATATCTCTTTGATATCGAGGAAATAGCTTTGCCCTTCCTC                   <  SRR4302543.4213959/94‑1 (MQ=60)

                                                                             CCCCCTTGGCGCTACGGACCTGGAGTTTACGCGTCGCTTCGGTTAATTGCGAAAATATCTCTTTGATATCGAGGAAATAGCTTTGCCCTTCCTC                   <  SRR4302543.3641113/94‑1 (MQ=60)

                                                                             CCCCCTTGGCGCTACGGACCTGGAGTTTACGCGTCGCTTCGGTTAATTGCGAAAATATCTCTTTGATATCGAGGAAATAGCTTTGCCCTTCCTC                   >  SRR4302543.7197796/1‑94 (MQ=60)

                                                                             CCCCCTTGGCGCTACGGACCTGGAGTTTACGCGTCGCTTCGGTTAATTGCGAAAATATCTCTTTGATATCGAGGAAATAGCTTTGCCCTTCCTC                   >  SRR4302543.7197795/1‑94 (MQ=60)

                                                                              CCCCTTTGCGCTGCCGACCTGGAGTTTATGCGTCGCTTCGGTTAATTGCGAAAATATCTCTTTGATATCGAGGAAATAGCTTTGCCCTTCCTCG                  <  SRR4302543.1576645/94‑1 (MQ=60)

                                                                              CCCCTTGGCGCTACGGACCTGGAGGTTACGCGTCGCTTCGGTTAATTGCGAAAATATCTCTTTGATATCGAGGAAATAGCTTTGCCCTTCCTCG                  >  SRR4302543.5783055/1‑94 (MQ=60)

                                                                               CCCTTGGCGCTACGGACCTGGAGTTTACGCGTCGCTTCGGTTAATTGCGAAAATATCTCTTTGATATCGAGGAAATAGCTTTGCCCTTCCTCGG                 >  SRR4302543.7733043/1‑94 (MQ=60)

                                                                               CCCTTGGCGCTACGGACCTGGAGTTTACGCGTCGCTTCGGTTAATTGCGAAAATATCTCTTTGATATCGAGGAAATAGCTTTGCCCTTCCTCGG                 >  SRR4302543.7733205/1‑94 (MQ=60)

                                                                               CCCTTGGCGCTACGGACCTGGAGTTTACGCGTCGCTTCGGTTAATTGCGAAAATATCTCTTTGATATCGAGGAAATAGCTTTGCCCTTCCTCGG                 >  SRR4302543.6662066/1‑94 (MQ=60)

                                                                               CCCTTGGCGCTACGGACCTGGAGTTTACGCGTCGCTTCGGTTAATTGCGAAAATATCTCTTTGATATCGAGGAAATAGCTTTGCCCTTCCTCGG                 >  SRR4302543.2288370/1‑94 (MQ=60)

                                                                                 CTTGGCGCTACGGACCTGGAGTTTACGCGTCGCTTCGGTTAATTGCGAAAATATCTCTTTGATATCGAGGAAATAGCTTTGCCCTTCCTCGGTC               <  SRR4302543.5393763/94‑1 (MQ=60)

                                                                                 CTTGGCGCTACGGACCTGGAGTTTACGCGTCGCTTCGGTTAATTGCGAAAATATCTCTTTGATATCGAGGAAATAGCTTTGCCCTTCCTCGGTC               >  SRR4302543.1920253/1‑94 (MQ=60)

                                                                                 CTTGGCGCTACGGACCTGGAGTTTACGCGTCGCTTCGGTTAATTGCGAAAATATCTCTTTGATATCGAGGAAATAGCTTTGCCCTTCCTCGGTC               <  SRR4302543.1326986/94‑1 (MQ=60)

                                                                                 CTTGGCGCTACGGACCTGGAGTTTACGCGTCGCTTCGGTTAATTGCGAAAATATCTCTTTGATATCGAGGAAATAGCTTTGCCCTTCCTCGGTC               >  SRR4302543.4541978/1‑94 (MQ=60)

                                                                                  TTGGCGCTACGGACCTGGAGTTTACGCGTCGCTTCGGTTAATTGCGAAAATATCTCTTTGATATCGAGGAAATAGCTTTGCCCTTCCTCGGTCA              >  SRR4302543.5554270/1‑94 (MQ=60)

                                                                                   TGGCGCTACGGACCTGGAGTTTACGCGTCGCTTCGGTTAATTGCGAAAATATCTCTTTGATATCGAGGAAATAGCTTTGCCCTTCCTCGGTCAG             <  SRR4302543.804128/94‑1 (MQ=60)

                                                                                   TGGCGCTACGGACCTGGAGTTTACGCGTCGCTTCGGTTAATTGCGAAAATATCTCTTTGATATCGAGGAAATAGCTTTGCCCTTCCTCGGTCAG             <  SRR4302543.5879957/94‑1 (MQ=60)

                                                                                   TGGCGCTACGGACCTGGAGTTTACGCGTCGCTTCGGTTAATTGCGAAAATATCTCTTTGATATCGAGGAAATAGCTTTGCCCTTCCTCGGTCAG             <  SRR4302543.4671121/94‑1 (MQ=60)

                                                                                      CGCTACGGACCTGGAGTTTACGCGTCGCTTCGGTTAATTGCGAAAATATCTCTTTGATATCGAGGAAATAGCTTTGCCCTTCCTCGGTCAGCAG          <  SRR4302543.7195320/94‑1 (MQ=60)

                                                                                      CGCTACGGACCTGGAGTTTACGCGTCGCTTCGGTTAATTGCGAAAATATCTCTTTGATATCGAGGAAATAGCTTTGCCCTTCCTCGGTCAGCAG          >  SRR4302543.5627335/1‑94 (MQ=60)

                                                                                      CGCTACGGACCTGGAGTTTACGCGTCGCTTCGGTTAATTGCGAAAATATCTCTTTGATATCGAGGAAATAGCTTTGCCCTTCCTCGGTCAGCAG          >  SRR4302543.6795730/1‑94 (MQ=60)

                                                                                        CTACGGACCTGGAGTTTACGGGTCGCTTCGGTAAATTGCGAAAATATCTCTTTGATATCGAGGAAATAGCTTTGCCCTTCCTCGGTCAGCAGGA        <  SRR4302543.6298762/94‑1 (MQ=60)

                                                                                        CTACGGACCTGGAGTTTACGCGTCGCTTCGGTTAATTGCGAAAATATCTCTTTGATATCGAGGAAATAGCTTTGCCCTTCCTCGGTCAGCAGGA        <  SRR4302543.2947832/94‑1 (MQ=60)

                                                                                         TACGGACCTGGAGTTTACGCGTCGCTTCGGTTAATTGCGAAAATATCTCTTTGATATCGAGGAAATAGCTTTGCCCTTCCTCGGTCAGCAGGAG       <  SRR4302543.7764098/94‑1 (MQ=60)

                                                                                         TACGGACCTGGAGTTTACGCGTCGCTTCGGTTAATTGCGAAAATATCTCTTTGATATCGAGGAAATAGCTTTGCCCTTCCTCGGTCAGCAGGAG       <  SRR4302543.6326657/94‑1 (MQ=60)

                                                                                         TACGGACCTGGAGTTTACGCGTCGCTTCGGTTAATTGCGAAAAGATCTCTTTGATATCGAGGAAATAGCTTTGCCCTTCCTCGGTCAGCAGGAG       <  SRR4302543.4657504/94‑1 (MQ=60)

                                                                                          ACGGACCTGGAGTTTACGCGTCGCTTCGGTTAATTGCGAAAATATCTCTTTGATATCGAGGAAATAGCTTTGCCCTTCCTCGGTCAGCAGGAGT      <  SRR4302543.2801869/94‑1 (MQ=60)

                                                                                          ACGGACCTGGAGTTTACGCGTCGCTTCGGTTAATTGCGAAAATATCTCTTTGATATCGAGGAAATAGCTTTGCCCTTCCTCGGTCAGCAGGAGT      <  SRR4302543.5752076/94‑1 (MQ=60)

                                                                                          ACGGACCTGGAGTTTACGCGTCGCTTCGGTTAATTGCGAAAATATCTCTTTGATATCGAGGAAATAGCTTTGCCCTTCCTCGGTCAGCAGGAGT      <  SRR4302543.5589994/94‑1 (MQ=60)

                                                                                          ACGGACCTGGAGTTTACGCGTCGCTTCGGTTAATTGCGAAAATATCTCTTTGATATCGAGGAAATAGCTTTGCCCTTCCTCGGTCAGCAGGAGG      >  SRR4302543.1899490/1‑94 (MQ=60)

                                                                                           CGGACCTGGAGTTTACGCGTCGCTTCGGTTAATTGCGAAAATATCTCTTTGATATCGAGGAAATAGCTTTGCCCTTCCTCGGTCAGCAGGAGTG     >  SRR4302543.4866877/1‑94 (MQ=60)

                                                                                             GACCTGGAGTTTACGCGTCGCTTCGGTTAATTGCGAAAATATCTCTTTGATATCGAGGAAATAGCTTTGCCCTTCCTCGGTCAGCAGGAGTGAA   >  SRR4302543.1981511/1‑94 (MQ=60)

                                                                                             GACCTGGAGTTTACGCGTCGCTTCGGTTAATTGCGAAAATATCTCTTTGATATCGAGGAAATAGCTTTGCCCTTCCTCGGTCAGCAGGAGTGAA   >  SRR4302543.6292991/1‑94 (MQ=60)

                                                                                             GACCTGGAGTTTACGCGTCGCTTCGGTTAATTGCGAAAATATCTCTTTGATATCGAGGAAATAGCTTTGCCCTTCCTCGGTCAGCAGGAGTGAA   >  SRR4302543.527284/1‑94 (MQ=60)

                                                                                              ACCTGGAGTTTACGCGTCGCTTCGGTTAATTGCGAAAATATCTCTTTGATATCGAGGAAATAGCTTTGCCCTTCCTCGGTCAGCAGGAGTGAAC  <  SRR4302543.101627/94‑1 (MQ=60)

TAAGCTGAATTAAAGCTGGAAAGTCGCGGAACCAACCAATGAATGGCGAAACTGGGGAGTAAACTGACCGTCAACG‑CCCCCTTGGCGCTACGGGCCTGGAGTTTACGCGTCGCTTCGGTTAATTGCGAAAATATCTCTTTGATATCGAGGAAATAGCTTTGCCCTTCCTCGGTCAGCAGGAGTGAAC  >  NC_000913/2940231‑2940417

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 0 ≤` `ATCG/ATCG` `< 2 ≤` `ATCG/ATCG` `< 25 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`