Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.

ALE, Flask, Isolate	Predicted Mutations	Mean Coverage	Total Reads	Percent Mapped	Mapped Reads	Average Read Length
A1 F1 I1 R1	1696	279.3	15874187	97.8%	15524954	93.0

Breseq alignment

BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	2,940,536	T→C	A18A (GCA→GCG)	gcvA ←	GcvA

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	2,940,536	0	T	C	99.4%	1048.1 / ‑3.5	338	A18A (GCA→GCG)	gcvA	GcvA
Reads supporting (aligned to +/- strand): ref base T (1/1); new base C (156/180); total (157/181)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 2.84e-01

Only 100 of 367 total aligned reads displayed.

CAAAAAATCCTCAAGAGACTTGATTTGATGACTTACTGCGGCTTGGGTCACAAAAAGCTCTTCTGCTGCGCGAGTGAAACTTAAATGGCGTGCTGCGGCATCAAAAACTCGTAAGGCATTTAGCGGTGGTAATCGTTTAGACATGGCTATTAAACTTTGATGTTAAATGAATTTAACAAT  >  NC_000913/2940446‑2940625

cAAAAAATCCTCAAGAGACTTGATTTGATGACTTACTGCGGCTTGGGTCACAAAAAGCTCTTCTGCTGCGCGAGTGAAACTTAAATGgcgcgc                                                                                         <  1:5062315/93‑1 (MQ=255)

cAAAAAATCCTCAAGAGACTTGATTTGATGACTTACTGCGGCTTGGGTCACAAAAAGCTCTTCTGCTGCGCGAGTGAAACTTAAATGgcgcgc                                                                                         >  2:6602116/1‑93 (MQ=255)

cAAAAAATCCTCAAGAGACTTGATTTGATGACTTACTGCGGCTTGGGTCACAAAAAGCTCTTCTGCTGCGCGAGTGAAACTTAAATGgcgcgc                                                                                         <  2:5113738/93‑1 (MQ=255)

cAAAAAATCCTCAAGAGACTTGATTTGATGACTTACTGCGGCTTGGGTCACAAAAAGCTCTTCTGCTGCGCGAGTGAAACTTAAATGgcgcgc                                                                                         >  2:3270001/1‑93 (MQ=255)

cAAAAAATCCTCAAGAGACTTGATTTGATGACTTACTGCGGCTTGGGTCACAAAAAGCTCTTCTGCTGCGCGAGTGAAACTTAAATGgcgcgc                                                                                         <  2:3816135/93‑1 (MQ=255)

 aaaaaaTCCTCAAGAGACTTGATTTGATGACTTACTGCGGCTTGGGTCACAAAAAGCTCTTCTGCTGCGCGAGTGAAACTTAAATGGCGcgct                                                                                        <  2:6821628/93‑1 (MQ=255)

   aaaaTCCTCAAGAGACTTGATTTGATGACTTACTGCGGCTTGGGTCACAAAAAGCTCTTCTGCTGCGCGAGTGAAACTTAAATGGCGcgctgg                                                                                      >  1:2591088/1‑92 (MQ=255)

   aaaaTCCTCAAGAGACTTGATTTGATGACTTACTGCGGCTTGGGTCACAAAAAGCTCTTCTGCTGCGCGAGTGAAACTTAAATGGCGcgctgc                                                                                      >  2:3194720/1‑93 (MQ=255)

     aaTCCTCAAGAGACTTGATTTGATGACTTACTGCGGCTTGGGTCACAAAAAGCTCTTCTGCTGCGCGAGTGAAACTTAAATGGCGCGCTGCgg                                                                                    >  2:4723987/1‑93 (MQ=255)

       tCCTCAAGAGACTTGATTTGATGACTTACTGCGGCTTGGGTCACAAAAAGCTCTTCTGCTGCGCGAGTGAAACTTAAATGGCGCGCTGCGGCa                                                                                  >  2:2005399/1‑93 (MQ=255)

       tCCTCAAGAGACTTGATTTGATGACTTACTGCGGCTTGGGTCACAAAAAGCTCTTCTGCTGCGCGAGTGAAACTTAAATGGCGCGCTGCGGCa                                                                                  >  2:3092359/1‑93 (MQ=255)

            aaGAGACTTGATTTGATGACTTACTGCGGCTTGGGTCACAAAAAGCTCTTCTGCTGCGCGAGTGAAACTTAAATGGCGCGCTGCGGCATCaaa                                                                             >  1:1991568/1‑93 (MQ=255)

             agagACTTGATTTGATGACTTACTGCGGCTTGGGTCACAAAAAGCTCTTCTGCTGCGCGAGTGAAACTTAAATGGCGCGCTGCGGCATCaaaa                                                                            >  1:1084089/1‑93 (MQ=255)

             agagACTTGATTTGATGACTTACTGCGGCTTGGGTCACAAAAAGCTCTTCTGCTGCGCGAGTGAAACTTAAATGGCGCGCTGCGGCATCaaaa                                                                            <  1:412356/93‑1 (MQ=255)

             agagACTTGATTTGATGACTTACTGCGGCTTGGGTCACAAAAAGCTCTTCTGCTGCGCGAGTGAAACTTAAATGGCGCGCTGCGGCATCaaaa                                                                            >  2:3419129/1‑93 (MQ=255)

             agagACTTGATTTGATGACTTACTGCGGCTTGGGTCACAAAAAGCTCTTCTGCTGCGCGAGTGAAACTTAAATGGCGCGCTGCGGCATCaaaa                                                                            >  2:3459686/1‑93 (MQ=255)

              gagaCTTGATTTGATGACTTACTGCGGCTTGGGTCACAAAAAGCTCTTCTGCTGCGCGAGTGAAACTTAAATGGCGCGCTGCGGCATCaaaaa                                                                           <  2:1457204/93‑1 (MQ=255)

              gagaCTTGATTTGATGACTTACTGCGGCTTGGGTCACAAAAAGCTCTTCTGCTGCGCGAGTGAAACTTAAATGGCGCGCTGCGGCATCaaaaa                                                                           >  1:1007585/1‑93 (MQ=255)

               agaCTTGATTTGATGACTTACTGCGGCTTGGGTCACAAAAAGCTCTTCTGCTGCGCGAGTGAAACTTAAATGGCGCGCTGCGGCATCAAAAAc                                                                          <  1:270384/93‑1 (MQ=255)

               agaCTTGATTTGATGACTTACTGCGGCTTGGGTCACAAAAAGCTCTTCTGCTGCGCGAGTGAAACTTAAATGGCGCGCTGCGGCATCAAAAAc                                                                          >  2:5462745/1‑93 (MQ=255)

                gaCTTGATTTGATGACTTACTGCGGCTTGGGTCACAAAAAGCCCTTCTGCTGCGCGAGGGAAACTTAAATGGCGCGCTGTGGCATCAAAAAcc                                                                         >  1:579959/1‑92 (MQ=255)

                 aCTTGATTTGATGACTTACTGCGGCTTGGGTCACAAAAAGCTCTTCTGCTGCGCGAGTGAAACTTAAATGGCGCGCTGCGGCATCAAAAACTc                                                                        <  1:2807088/93‑1 (MQ=255)

                 aCTTGATTTGATGACTTACTGCGGCTTGGGTCACAAAAAGCTCTTCTGCTGCGCGAGTGAAACTTAAATGGCGCGCTGCGGCATCAAAAACTc                                                                        <  1:6775082/93‑1 (MQ=255)

                  cTTGATTTGATGACTTACTGCGGCTTGGGTCACAAAAAGCTCTTCTGCTGCGCGAGTGAAACTTAAATGGCGCGCTGCGGCATCAAAAACTCg                                                                       <  2:2535427/93‑1 (MQ=255)

                   ttgatttgatGACTTACTGCGGCTTGGGTCACAAAAAGCTCTTCTGCTGCGCGAGTGAAACTTAAATGGCGCGCTGCGGCATCAAAAACTCGt                                                                      >  2:393685/1‑93 (MQ=255)

                    tgatttgatGACTTACTGCGGCTTGGGTCACAAAAAGCTCTTCTGCTGCGCGAGTGAAACTTAAATGGCGCGCTGCGGCATCAAAAACTCGTa                                                                     <  1:2090156/93‑1 (MQ=255)

                     gatttgatGACTTACTGCGGCTTGGGTCACAAAAAGCTCTTCTGCTGCGCGAGTGAAACTTAAATGGCGCGCTGCGGCATCAAAAACTCGTaa                                                                    >  1:6684791/1‑93 (MQ=255)

                      atttgatGTCCTACTGCGGCTTGGGTCACAAAAAGCTCTTCTGCTGCGCGCGTGAAACTTAAATGGCGCGCTGCGGCATCAAAAACTCGTAAg                                                                   <  1:5393778/93‑1 (MQ=255)

                      atttgatGACTTACTGCGGCTTGGGTCACAAAAAGCTCTTCTGCTGCGCGAGTGAAACTTAAATGGCGCGCTGCGGCATCAAAAACTCGTAAg                                                                   <  1:517777/93‑1 (MQ=255)

                      atttgatGACTTACTGCGGCTTGGGTCACAAAAAGCTCTTCTGCTGCGCGAGTGAAACTTAAATGGCGCGCTGCGGCATCAAAAACTCGTAAg                                                                   <  1:7522063/93‑1 (MQ=255)

                         tgatgaCTTACTGCGGCTTGGGTCACAAAAAGCTCTTCTGCTGCGCGAGTGAAACTTAAATGGCGCGCTGCGGCATCAAAAACTCGTAAGGCa                                                                <  2:4557756/93‑1 (MQ=255)

                            tgaCTTACTGCGGCTTGGGTCACAAAAAGCTCTTCTGCTGCGCGAGTGAAACTTAAATGGCGCGCTGCGGCATCAAAAACTCGTAAGGCAttt                                                             >  1:4717714/1‑93 (MQ=255)

                             gaCTTACTGCGGCTTGGGTCACAAAAAGCTCTTCTGCTGCGCGAGTGAAACTTAAATGGCGCGCTGCGGCATCAAAAACTCGTAAGGCATTTa                                                            >  2:220073/1‑93 (MQ=255)

                             gaCTTACTGCGGCTTGGGTCACAAAAAGCTCTTCTGCTGCGCGAGTGAAACTTAAATGGCGCGCTGCGGCATCAAAAACTCGTAAGGCATTTa                                                            <  2:849394/93‑1 (MQ=255)

                                ttACTGCGGCTTGGGTCACAAAAAGCTCTTCTGCTGCGCGAGTGAAACTTAAATGGCGCGCTGCGGCATCAAAAACTCGTAAGGCATTTAGCg                                                         >  1:1434513/1‑93 (MQ=255)

                                 tACTGCGGCTTGGGTCACAAAAAGCTCTTCTGCTGCGCGAGTGAAACTTAAATGGCGCGCTGCGGCATCAAAAACTCGTAAGGCATTTAGCgg                                                        >  2:6410143/1‑93 (MQ=255)

                                   cTGCGGCTTGGGTCACAAAAAGCTCTTCTGCTGCGCGAGTGAAACTTAAATGGCGCGCTGCGGCATCAAAAACTCGTAAGGCATTTAGCggtg                                                      <  2:5530396/93‑1 (MQ=255)

                                       ggCTTGGGTCACAAAAAGCTCTTCTGCTGCGCGAGTGAAACTTAAATGGCGCGCTGCGGCATCAAAAACTCGTAAGGCATTTAGCGGTGGTaa                                                  <  2:2414551/93‑1 (MQ=255)

                                       ggCTTGGGTCACAAAAAGCTCTTCTGCTGCGCGAGTGAAACTTAAATGGCGCGCTGCGGCATCAAAAACTCGTAAGGCATTTAGCGGTGGTaa                                                  <  1:7740058/93‑1 (MQ=255)

                                       gacTTGGGTCACAAAAAGCTCTTCTGCTGCGCGAGTGAAACTTAAATGGCGCGCTGCGGCATCAAAAACTCGTAAGGCATTTAGCGGTGGTaa                                                  <  1:5378219/91‑1 (MQ=255)

                                        gCTTGGGTCACACAAAGCTCTTCTGCTGCGCGAGTGAAACTAAAATGGCGCGCTGAGGCATCAAAACCTCGTAAGGCATTTAGCGGTGGTAAt                                                 <  2:7035371/93‑1 (MQ=255)

                                        gCTTGGGTCACAAAAAGCTCTTCTGCTGCGCGAGTGAAACTTAAATGGCGCGCTGCGGCATCAAAAACTCGTAAGGCATTTAGCGGTGGTAAt                                                 <  1:7203809/93‑1 (MQ=255)

                                        gCTTGGGTCACAAAAAGCTCTTCTGCTGCGCGAGTGAAACTTAAATGGCGCGCTGCGGCATCAAAAACTCGTAAGGCATTTAGCGGTGGTAAt                                                 <  1:182755/93‑1 (MQ=255)

                                        gCTTGGGTCACAAAAAGCTCTTCTGCTGCGCGAGTGAAACTTAAATGGCGCGCTGCGCCATCAAAAACTCGTAAGGCATTTAGCGGTGGTAAt                                                 <  2:7830596/93‑1 (MQ=255)

                                         cTTGGGTCACAAAAAGCTCTTCTGCTGCGCGAGTGAAACTTAAATGGCGCGCTGCGGCATCAAAAACTCGTAAGGCATTTAGCGGTGGTAATc                                                >  2:6392795/1‑93 (MQ=255)

                                          ttGGGTCACAAAAAGCTCTTCTGCTGCGCGAGTGAAACTTAAATGGCGCGCTGCGGCATCAAAAACTCGTAAGGCATTTAGCGGTGGTAATCg                                               >  1:6874623/1‑93 (MQ=255)

                                            gggTCACAAAAAGCTCTTCTGCTGCGCGAGTGAAACTTAAATGGCGCGCTGCGGCATCAAAAACTCGTAAGGCATTTAGCGGTGGTAATCGtt                                             <  1:4944960/93‑1 (MQ=255)

                                                cacaAAAAGCTCTTCTGCTGCGCGAGTGAAACTTAAATGGCGCGCTGCGGCATCAAAAACTCGTAAGGCATTTAGCGGTGGTAATCGTTTAGa                                         <  1:3795606/93‑1 (MQ=255)

                                                 acaAAAAGCTCTTCTGCTGCGCGAGTGAAACTTAAATGGCGCGCTGCGGCATCAAAAACTCGTAAGGCATTTAGCGGTGGTAATCGTTTAGAc                                        >  2:4922930/1‑93 (MQ=255)

                                                   aaaaaGCTCTTCTGCTGCGCGAGTGAAACTTAAATGGCGCGCTGCGGCATCAAAAACTCGTAAGGCATTTAGCGGTGGTAATCGTTTAGACAt                                      <  1:4180849/93‑1 (MQ=255)

                                                   aaaaaGCTCTTCTGCTGCGCGAGTGAAACTTAAATGGCGCGCTGCGGCATCAAAAACTCGTAAGGCATTTAGCGGTGGTAATCGTTTAGACAt                                      <  1:640499/93‑1 (MQ=255)

                                                    aaaaGCTCTTCTGCTGCGCGAGTGAAACTTAAATGGCGCGCTGCGGCATCAAAAACTCGTAAGGCATTTAGCGGTGGTAATCGTTTAGACATg                                     >  1:4483130/1‑93 (MQ=255)

                                                    aaaaGCTCTTCTGCTGCGCGAGTGAAACTGAAATGGCGCGCTGCGGCATCAAAAACTCGTAAGGCATTTAGCGGTGGTAATCGTTTAGACATg                                     <  1:3444816/93‑1 (MQ=255)

                                                     aaaGCTCTTCTGCTGCGCGAGTGAAACTTAAATGGCGCGCTGCGGCATCAAAAACTCGTAAGGCATTTAGCGGTGGTAATCGTTTAGACATgg                                    <  1:4776934/93‑1 (MQ=255)

                                                     aaaGCTCTTCTGCTGCGCGAGTGAAACTTAAATGGCGCGCTGCGGCATCAAAAACTCGTAAGGCATTTAGCGGTGGTAATCGTTTAGACATgg                                    >  2:6126736/1‑93 (MQ=255)

                                                      aaGCTCTTCTGCTGCGCGAGTGAAACTTAAATGGCGCGCTGCGGCATCAAAAACTCGTAAGGCATTTAGCGGTGGTAATCGTTTAGACATGGc                                   <  1:2339624/93‑1 (MQ=255)

                                                      aaGCTCTTCTGCTGCGCGAGTGAAACTTAAATGGCGCGCTGCGGCATCAAAAACTCGTAAGGCATTTAGCGGTGGTAATCGTTTAGACATGGc                                   >  1:1369356/1‑93 (MQ=255)

                                                      aaGCTCTTCTGCTGCGCGAGTGAAACTTAAATGGCGCGCTGCGGCATCAAAAACTCGTAAGGCATTTAGCGGTGGTAATCGTTTAGACATGGc                                   >  1:307866/1‑93 (MQ=255)

                                                      aaGCTCTTCTGCTGCGCGAGTGAAACTTAAATGGCGCGCTGCGGCATCAAAAACTCGTAAGGCATTTAGCGGTGGTAATCGTTTAGACATGGc                                   >  2:2989370/1‑93 (MQ=255)

                                                        gCTCTTCTGCTGCGCGAGTGAAACTTAAATGGCGCGCTGCGGCATCAAAAACTCGTAAGGCATTTAGCGGTGGTAATCGTTTAGACATGGCtt                                 >  1:7843798/1‑92 (MQ=255)

                                                        gCTCTTCTGCTGCGCGAGTGAAACTTAAATGGCGCGCTGCGGCATCAAAAACTCGTAAGGCATTTAGCGGTGGTAATCGTTTAGACATGGCTa                                 >  2:2867221/1‑93 (MQ=255)

                                                        gCTCTTCTGCTGCGCGAGTGAAACTTAAATGGCGCGCTGCGGCATCAAAAACTCGTAAGGCATTTAGCGGTGGTAATCGTTTAGACATGGCTa                                 >  2:7649240/1‑93 (MQ=255)

                                                        gCTCTTCTGCTGCGCGAGTGAAACTTAAATGGCGCGCTGCGGCATCAAAAACTCGTAAGGCATTTAGCGGTGGTAATCGTTTAGACATGGCTa                                 >  1:2957333/1‑93 (MQ=255)

                                                        gCTCTTCTGCTGCGCGAGTGAAACTTAAATGGCGCGCTGCGGCATCAAAAACTCGTAAGGCATTTAGCGGTGGTAATCGTTTAGACATGGCTa                                 <  2:4441944/93‑1 (MQ=255)

                                                         ctctTCTGCTGCGCGAGTGAAACTTAAATGGCGCGCTGCGGCATCAAAAACTCGTAAGGCATTTAGCGGTGGTAATCGTTTAGACATGGCTAt                                >  1:651499/1‑93 (MQ=255)

                                                         ctctTCTGCTGCGCGAGTGAAACTTAAATGGCGCGCTGCGGCATCAAAAACTCGTAAGGCATTTAGCGGTGGTAATCGTTTAGACATGGCTAt                                <  2:522441/93‑1 (MQ=255)

                                                          tcttctGCTGCGCGAGTGAAACTTAAATGGCGCGCTGCGGCATCAAAAACTCGTAAGGCATTTAGCGGTGGTAATCGTTTAGACATGGCTAtt                               <  1:6209957/93‑1 (MQ=255)

                                                           cttctGCTGCGCGAGTGAAACTTAAATGGCGCGCTGCGGCATCAAAAACTCGTAAGGCATTTAGCGGTGGTAATCGTTTAGACATGGCTATTa                              <  2:193920/93‑1 (MQ=255)

                                                            ttctGCTGCGCGAGTGAAACTTAAATGGCGCGCTGCGGCATCAAAAACTCGTAAGGCATTTAGCGGTGGTAATCGTTTAGACATGGCTATTaa                             >  2:1835490/1‑93 (MQ=255)

                                                             tctGCTGCGCGAGTGAAACTTAAATGGCGCGCTGCGGCATCAAAAACTCGTAAGGCATTTAGCGGTGGTAATCGTTTAGACATGGCTATTaaa                            >  2:7536720/1‑93 (MQ=255)

                                                              ctgctgCGCGAGTGAAACTTAAATGGCGCGCTGCGGCATCAAAAACGCGTAAGGCATTTAGCGGTGGTAATCGTTTAGACATGGCTATTAAAc                           <  1:5663305/93‑1 (MQ=255)

                                                               tgctgcGCGAGTGAAACTTAAATGGCGCGCTGCGGCATCAAAAACTCGTAAGGCATTTAGCGGTGGTAATCGTTTAGACATGGCTATTAAACt                          >  2:7699103/1‑93 (MQ=255)

                                                               tgctgcGCGAGTGAAACTTAAATGGCGCGCTGCGGCATCAAAAACTCGTAAGGCATTTAGCGGTGGTAATCGTTTAGACATGGCTATTAAACt                          <  2:3544945/93‑1 (MQ=255)

                                                                 ctgcGCGAGTGAAACTTAAATGGCGCGCTGCGGCATCAAAAACTCGTAAGGCATTTAGCGGTGGTAATCGTTTAGACATGGCTATTAAACttt                        <  2:2763633/93‑1 (MQ=255)

                                                                 ctgcGCGAGTGAAACTTAAATGGCGCGCTGCGGCATCAAAAACTCGTAAGGCATTTAGCGGTGGTAATCGTTTAGACATGGCTATTAAACttt                        <  2:1012308/93‑1 (MQ=255)

                                                                  tgcGCGAGTGAAACTTAAATGGCGCGCTGCGGCATCAAAAACTCGTAAGGCATTTAGCGGTGGTAATCGTTTAGACATGGCTATTAAACTTTg                       >  2:1674987/1‑93 (MQ=255)

                                                                   gcgcGAGTGAAACTTAAATGGCGCGCTGCGGCATCAAAAACTCGTAAGGCATTTAGCGGTGGTAATCGTTTAGACATGGCTATTAAACTTTGa                      <  2:6713432/93‑1 (MQ=255)

                                                                   gcgcGAGTGAAACTTAAATGGCGCGCTGCGGCATCAAAAACTCGTAAGGCATTTAGCGGTGGTAATCGTTTAGACATGGCTATTAAACTTTGa                      <  1:4286421/93‑1 (MQ=255)

                                                                    cgcgAGTGAAACTTAAATGGCGCGCTGCGGCATCAAAAACTCGTAAGGCATTTAGCGGTGGTAATCGTTTAGACATGGCTATTAAACTTTGAt                     <  2:6050999/93‑1 (MQ=255)

                                                                       gAGTGAAACTTAAATGGCGCGCTGCGGCATCAAAAACTCGTAAGGCATTTAGCGGTGGTAATCGTTTAGACATGGCTATTAAACTTTGATGtt                  >  2:5318941/1‑93 (MQ=255)

                                                                       gAGTGAAACTTAAATGGCGCGCTGCGGCATCAAAAACTCGTAAGGCATTTAGCGGTGGTAATCGTTTAGACATGGCTATTAAACTTTGATGtt                  >  2:7198082/1‑93 (MQ=255)

                                                                        aGTGAAACTTAAATGGCGCGCTGCGGCATCAAAAACTCGTAAGGCATTTAGCGGTGGTAATCGTTTAGACATGGCTATTAAACTTTGATGTTa                 <  2:4825870/93‑1 (MQ=255)

                                                                        aGTGAAACTTAAATGGCGCGCTGCGGCATCAAAAACTCGTAAGGCATTTAGCGGTGGTAATCGTTTAGACATGGCTATTAAACTTTGATGTTa                 <  2:3664348/93‑1 (MQ=255)

                                                                         gTGAAACTTAAATGGCGCGCTGCGGCATCAAAAACTCGTAAGGCATTTAGCGGTGGTAATCGTTTAGACATGGCTATTAAACTTTGATGTTaa                <  2:2242143/93‑1 (MQ=255)

                                                                          tGAAACTTAAATGGCGCGCTGCGGCATCAAAAGCTCGTAAGGCATTTAGCGGTGGTAATCGTTTAGACATGGCTATTAAACTTTGATGTTaaa               <  1:3689568/93‑1 (MQ=255)

                                                                          tGAAACTTAAATGGCGCGCTGCGGCATCAAAAACTCGTAAGGCATTTAGCGGTGGTAATCGTTTAGACATGGCTATTAAACTTTGATGTTaaa               <  1:3281908/93‑1 (MQ=255)

                                                                          tGAAACTTAAATGGCGCGCTGCGGCATCAAAAACTCGTAAGGCATTTAGCGGTGGTAATCGTTTAGACATGGCTATTAAACTTTGATGTTaaa               <  1:1649721/93‑1 (MQ=255)

                                                                          tGAAACTTAAATGGCGCGCTGCGGCATCAAAAACTCGTAAGGCATTTAGCGGTGGTAATCGTTTAGACATGGCTATTAAACTTTGATGTTaaa               <  2:6732135/93‑1 (MQ=255)

                                                                          tGAAACTTAAATGGCGCGCTGCGGCATCAAAAACTCGTAAGGCATTTAGCGGTGGTAATCGTTTAGACATGGCTATTAAACTTTGATGTTaaa               >  2:2655388/1‑93 (MQ=255)

                                                                             aaCTTAAATGGCGCGCTGCGGCATCAAAAACTCGTAAGGCATTTAGCGGTGGTAATCGTTTAGACATGGCTATTAAACTTTGATGTTAAATGa            >  1:6295777/1‑93 (MQ=255)

                                                                             aaCTTAAATGGCGCGCTGCGGCATCAAAAACTCGTAAGGCATTTAGCGGTGGTAATCGTTTAGACATGGCTATTAAACTTTGATGTTAAATGa            <  1:828818/93‑1 (MQ=255)

                                                                               cTTAAATGGCGCGCTGCGGCATCAAAAACTCGTAAGGCATTTAGCGGTGGTAATCGTTTAGACATGGCTATTAAACTTTGATGTTAAATGAAt          <  2:574923/93‑1 (MQ=255)

                                                                               cTTAAATGGCGCGCTGCGGCATCAAAAACTCGTAAGGCATTTAGCGGTGGTAATCGTTTAGACATGGCTATTAAACTTTGATGTTAAATGAAt          >  2:2093780/1‑93 (MQ=255)

                                                                               cTTAAATGGCGCGCTGCGGCATCAAAAACTCGTAAGGCATTTAGCGGTGGTAATCGTTTAGACATGGCTATTAAACTTTGATGTTAAATGAAt          <  2:1275180/93‑1 (MQ=255)

                                                                               cTTAAATGGCGCGCTGCGGCATCAAAAACTCGTAAGGCATTTAGCGGTGGTAATCGTTTAGACATGGCTATTAAACTTTGATGTTAAATGAAt          >  1:883029/1‑93 (MQ=255)

                                                                                ttAAATGGCGCGCTGCGGCATCAAAAACTCGTAAGGCATTTAGCGGTGGTAATCGTTTAGACATGGCTATTAAACTTTGATGTTAAATGAAtt         >  2:627799/1‑93 (MQ=255)

                                                                                     tGGCGCGCTGCGGCATCAAAAACTCGTAAGGCATTTAGCGGTGGTAATCGTTTAGACATGGCTATTAAACTTTGATGTTAAATGAATTTAACa    <  2:537169/93‑1 (MQ=255)

                                                                                     tGGCGCGCTGCGGCATCAAAAACTCGTAAGGCATTTAGCGGTGGTAATCGTTTAGACATGGCTATTAAACTTTGATGTTAAATGAATTTAACa    <  1:5594869/93‑1 (MQ=255)

                                                                                       gcgcgcTGCGGCATCAAAAACTCGTAAGGCATTTAGCGGTGGTAATCGTTTAGACATGGCTATTAAACTTTGATGTTAAATGAATTTAACAAt  <  1:2418371/93‑1 (MQ=255)

                                                                                       gcgcgcTGCGGCATCAAAAACTCGTAAGGCATTTAGCGGTGGTAATCGTTTAGACATGGCTATTAAACTTTGATGTTAAATGAATTTAACAAt  <  1:1187478/93‑1 (MQ=255)

CAAAAAATCCTCAAGAGACTTGATTTGATGACTTACTGCGGCTTGGGTCACAAAAAGCTCTTCTGCTGCGCGAGTGAAACTTAAATGGCGTGCTGCGGCATCAAAAACTCGTAAGGCATTTAGCGGTGGTAATCGTTTAGACATGGCTATTAAACTTTGATGTTAAATGAATTTAACAAT  >  NC_000913/2940446‑2940625

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 24 ≤` `ATCG/ATCG` `< 30 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`

GATK/CNVnator alignment

BRESEQ :: bam2aln output

CCCCAAAAAATCCTCAAGAGACTTGATTTGATGACTTACTGCGGCTTGGGTCACAAAAAGCTCTTCTGCTGCGCGAGTGAAACTTAAATGGCGTGCTGCGGCATCAAAAACTCGTAAGGCATTTAGCGGTGGTAATCGTTTAGACATGGCTATTAAACTTTGATGTTAAATGAATTTAACAATTAGA  >  NC_000913/2940443‑2940629

CCCCAAAAAATCCTCAAGAGACTTGATTTGATGACTTACTGCGGCTTGGGTCACAAAAAGCTCTTCTGCTGCGCGAGTGAAACTTAAATGGCGC                                                                                               >  SRR4302543.7281086/1‑94 (MQ=60)

CCCCAAAAAATCCTCAAGAGACTTGATTTGATGACTTACTGCGGCTTGGGTCACAAAAAGCTCTTCTGCTGCGCGAGTGAAACTTAAATGGCGC                                                                                               >  SRR4302543.5209092/1‑94 (MQ=60)

  CCAAAAAATCCTCAAGAGACTTGATTTGATGACTTACTGCGGCTTGGGTCACAAAAAGCTCTTCTGCTGCGCGAGTTAAACTTAAATGGCGCGC                                                                                             >  SRR4302543.7512032/1‑94 (MQ=60)

  CCAAAAAATCCTCAAGAGACTTGATTTGATGACTTACTGCGGCTTGGGTCACAAAAAGCTCTTCTGCTGCGCGAGTGAAACTTAAATGGCGCGC                                                                                             <  SRR4302543.5083630/94‑1 (MQ=60)

  CCAAAAAATCCTCAAGAGACTTGATTTGATGACTTACTGCGGCTTGGGTCACAAAAAGCTCTTCTGCTGCGCGAGTGAAACTTAAATGGCGCGC                                                                                             >  SRR4302543.4774498/1‑94 (MQ=60)

   CAAAAAATCCTCAAGAGACTTGATTTGATGACTTACTGCGGCTTGGGTCACAAAAAGCTCTTCTGCTGCGCGAGTGAAACTTAAATGGCGCGCT                                                                                            <  SRR4302543.5108299/94‑1 (MQ=60)

    AAAAAATCCTCAAGAGACTTGATTTGATGACTTACTGCGGCTTGGGTCACAAAAAGCTCTTCTGCTGCGCGAGTGAAACTTAAATGGCGCGCTG                                                                                           <  SRR4302543.4172112/94‑1 (MQ=60)

    AAAAAATCCTCAAGAGACTTGATTTGATGACTTACTGCGGCTTGGGTCACAAAAAGCTCTTCTGCTGCGCGAGTGAAACTTAAATGGCGCGCTG                                                                                           >  SRR4302543.5009675/1‑94 (MQ=60)

     AAAAATCCTCAAGAGACTTGATTTGATGACTTACTGCGGCTTGGGTCACAAAAAGCTCTTCTGCTGCGCGAGTGAAACTTAAATGGCGCGCTGG                                                                                          >  SRR4302543.2614634/1‑94 (MQ=60)

     AAAAATCCTCAAGAGACTTGATTTGATGACTTACTGCGGCTTGGGTCACAAAAAGCTCTTCTGCTGCGCGAGTGAAACTTAAATGGCGCGCTGC                                                                                          >  SRR4302543.1872604/1‑94 (MQ=60)

      aagagCCTCAAGAGACTTGATGTGAGGACTTACCGCGGCTGGGGTCACAAAAAGCTCTTCTGCGGCGCGAGTGAAACTTAAATGGCGCGCTGCG                                                                                         <  SRR4302543.4674182/89‑1 (MQ=60)

      AAAATCCTCAAGAGACTTGATTTGATGACTTACTGCGGCTTGGGTCACAAAAAGCTCTTCTGCTGCGCGAGTGAAACTTAAATGGCGCGCTGCG                                                                                         <  SRR4302543.4674181/94‑1 (MQ=60)

       AAATCCTCAAGAGACTTGATTTGATGACTTACTGCGGCTTGGGTCACAAAAAGCTCTTCTGCTGCGCGAGTGAAACTTAAATGGCGCGCTGCGG                                                                                        >  SRR4302543.2295618/1‑94 (MQ=60)

         ATCCTCAAGAGACTTGATTTGATGACTTACTGCGGCTTGGGTCACAAAAAGCTCTTCTGCTGCGCGAGTGAAACTTAAATGGCGCGCTGCGGCA                                                                                      >  SRR4302543.1386380/1‑94 (MQ=60)

            CTCAAGAGACTTGATTTGATGACTTACTGCGGCTTGGGTCACAAAAAGCTCTTCTGCTGCGCGAGTGAAACTTAAATGGCGCGCTGCGGCATCA                                                                                   >  SRR4302543.1555967/1‑94 (MQ=60)

             TCAAGAGACTTGATTTGATGACTTACTGCGGCTTGGGTCACAAAAAGCTCTTCTGCTGCGCGAGTGAAACTTAAATGGCGCGCTGCGGCATCAA                                                                                  >  SRR4302543.5778289/1‑94 (MQ=60)

              CAAGAGACTTGATTTGATGACTTACTGCGGCTTGGGTCACAAAAAGCTCTTCTGCTGCGCGAGTGAAACTTAAATGGCGCGCTGCGGCATCAAA                                                                                 >  SRR4302543.2009425/1‑94 (MQ=60)

              CAAGAGACTTGATTTGATGACTTACTGCGGCTTGGGTCACAAAAAGCTCTTCTGCTGCGCGAGTGAAACTTAAATGGCGCGCTGCGGCATCAAA                                                                                 >  SRR4302543.5711086/1‑94 (MQ=60)

               AAGAGACTTGATTTGATGACTTACTGCGGCTTGGGTCACAAAAAGCTCTTCTGCTGCGCGAGTGAAACTTAAATGGCGCGCTGCGGCATCAAAA                                                                                >  SRR4302543.1093826/1‑94 (MQ=60)

                AGAGACTTGATTTGATGACTTACTGCGGCTTGGGTCACAAAAAGCTCTTCTGCTGCGCGAGTGAAACTTAAATGGCGCGCTGCGGCATCAAAAA                                                                               <  SRR4302543.416171/94‑1 (MQ=60)

                AGAGACTTGATTTGATGACTTACTGCGGCTTGGGTCACAAAAAGCTCTTCTGCTGCGCGAGTGAAACTTAAATGGCGCGCTGCGGCATCAAAAA                                                                               >  SRR4302543.1016498/1‑94 (MQ=60)

                 GAGACTTGATTTGATGACTTACTGCGGCTTGGGTCACAAAAAGCTCTTCTGCTGCGCGAGTGAACCTTAAATGGCGCGCTGCGGCATCAAAAAC                                                                              <  SRR4302543.6753071/94‑1 (MQ=60)

                 GAGACTTGATTTGATGACTTACTGCGGCTTGGGTCACAAAAAGCTCTTCTGCTGCGCGAGTGAAACTTAAATGGCGCGCTGCGGCATCAAAAAC                                                                              <  SRR4302543.241961/94‑1 (MQ=60)

                  AGACTTGATTTGATGACTTACTGCGGCTTGGGTCACAAAAAGCTCTTCTGCTGCGCGAGTGAAACTTAAATGGCGCGCTGCGGCATCAAAAACT                                                                             <  SRR4302543.272758/94‑1 (MQ=60)

                  AGACTTGATTTGATGACTTACTGCGGCTTGGGTCACAAAAAGCTCTTCTGCTGCGCGAGTGAAACTTAAATGGCGCGCTGCGGCATCAAAAACT                                                                             <  SRR4302543.3741044/94‑1 (MQ=60)

                  AGACTTGATTTGATGACTTACTGCGGCTTGGGTCACAAAAAGCCCTTCTGCTGCGCGAGGGAAACTTAAATGGCGCGCTGTGGCATCAAAAACC                                                                             >  SRR4302543.585257/1‑94 (MQ=60)

                   GACTTGATTTGATGACTTACTGCGGCTTGGGTCACAAAAAGCTCTTCTGCTGCGCGAGTGAAACTTAAATGGCGCGCTGCGGCATCAAAAACTC                                                                            >  SRR4302543.6631532/1‑94 (MQ=60)

                   GACTTGATTTGATGACTTACTGCGGCTTGGGTCACAAAAAGCTCTTCTGCTGCGCGAGTGAAACTTAAATGGCGCGCTGCGGCATCAAAAACTC                                                                            >  SRR4302543.6837868/1‑94 (MQ=60)

                    ACTTGATTTGATGACTTACTGCGGCTTGGGTCACAAAAAGCTCTTCTGCTGCGCGAGTGAAACTTAAATGGCGCGCTGCGGCATCAAAAACTCG                                                                           <  SRR4302543.2832780/94‑1 (MQ=60)

                    ACTTGATTTGATGACTTACTGCGGCTTGGGTCACAAAAAGCTCTTCTGCTGCGCGAGTGAAACTTAAATGGCGCGCTGCGGCATCAAAAACTCG                                                                           <  SRR4302543.6839086/94‑1 (MQ=60)

                    ACTTGATTTGATGACTTACTGCGGCTTGGGTCACAAAAAGCTCTTCTGCTGCGCGAGTGAAACTTAAATGGCGCGCTGCGGCATCAAAAACTCG                                                                           <  SRR4302543.6839084/94‑1 (MQ=60)

                       TGATTTGATGACTTACTGCGGCTTGGGTCACAAAAAGCTCTTCTGCTGCGCGAGTGAAACTTAAATGGCGCGCTGCGGCATCAAAAACTCGTAA                                                                        <  SRR4302543.2108829/94‑1 (MQ=60)

                       TGATTTGATGACTTACTGCGGCTTGGGTCACAAAAAGCTCTTCTGCTGCGCGAGTGAAACTTAAATGGCGCGCTGCGGCATCAAAAACTCGTAA                                                                        <  SRR4302543.1873781/94‑1 (MQ=60)

                       TGATTTGATGACTTACTGCGGCTTGGGTCACAAAAAGCTCTTCTGCTGCGCGAGTGAAACTTAAATGGCGCGCTGCGGCATCAAAAACTCGTAA                                                                        >  SRR4302543.6747898/1‑94 (MQ=60)

                        GATTTGATGACTTACTGCGGCTTGTGTCACAAAAAGCTTTTCTTCTGCGCGAGTGAAACTTAAAGGGCGCGCTGCGGCAACAAAAACTCGTAAG                                                                       <  SRR4302543.2658199/94‑1 (MQ=60)

                        GATTTGATGACTTACTGCGGCTTGGGTCACAAAAAGCTCTTCTGCTGCGCGAGTGAAACTTAAATGGCGCGCTGCGGCATCAAAAACTCGTAAG                                                                       >  SRR4302543.561352/1‑94 (MQ=60)

                        GATTTGATGACTTACTGCGGCTTGGGTCACAAAAAGCTCTTCTGCTGCGCGAGTGAAACTTAAATGGCGCGCTGCGGCATCAAAAACTCGTAAG                                                                       <  SRR4302543.2658200/94‑1 (MQ=60)

                         ATTTGATGTCCTACTGCGGCTTGGGTCACAAAAAGCTCTTCTGCTGCGCGCGTGAAACTTAAATGGCGCGCTGCGGCATCAAAAACTCGTAAGG                                                                      <  SRR4302543.5442819/94‑1 (MQ=60)

                         ATTTGATGACTTACTGCGGCTTGGGTCACAAAAAGCTCTTCTGCTGCGCGAGTGAAACTTAAATGGCGCGCTGCGGCATCAAAAACTCGTAAGG                                                                      <  SRR4302543.501375/94‑1 (MQ=60)

                         ATTTGATGACTTACTGCGGCTTGGGTCACAAAAAGCTCTTCTGCTGCGCGAGTGAAACTTAAATGGCGCGCTGCGGCATCAAAAACTCGTAAGG                                                                      <  SRR4302543.522582/94‑1 (MQ=60)

                         ATTTGATGACTTACTGCGGCTTGGGTCACAAAAAGCTCTTCTGCTGCGCGAGTGAAACTTAAATGGCGCGCTGCGGCATCAAAAACTCGTAAGG                                                                      <  SRR4302543.513443/94‑1 (MQ=60)

                         ATTTGATGACTTACTGCGGCTTGGGTCACAAAAAGCTCTTCTGCTGCGCGAGTGAAACTTAAATGGCGCGCTGCGGCATCAAAAACTCGTAAGG                                                                      <  SRR4302543.7593851/94‑1 (MQ=60)

                         ATTTGATGACTTACTGCGGCTTGGGTCACAAAAAGCTCTTCTGCTGCGCGAGTGAAACTTAAATGGCGCGCTGCGGCATCAAAAACTCGTAAGG                                                                      <  SRR4302543.501374/94‑1 (MQ=60)

                           TTGATGACTTACTGCGGCTTGGGTCACAAAAAGCTCTTCTGCTGCGCGAGTGAAACTTAAATGGCGCGCTGCGGCATCAAAAACTCGTAAGGCA                                                                    >  SRR4302543.6229780/1‑94 (MQ=60)

                           TTGATGACTTACTGCGGCTTGGGTCACAAAAAGCTCTTCTGCTGCGCGAGTGAAACTTAAATGGCGCGCTGCGGCATCAAAAACTCGTAAGGCA                                                                    <  SRR4302543.6380209/94‑1 (MQ=60)

                            TGATGACTTACTGCGGCTTGGGTCACAAAAAGCTCTTCTGCTGCGCGAGTGAAACTTAAATGGCGCGCTGCGGCATCAAAAACTCGTAAGGCAT                                                                   <  SRR4302543.1825483/94‑1 (MQ=60)

                              ATGACTTACTGCGGCTTGGGTCACAAAAAGCTCTTCTGCTGCGCGAGTGAAACTTAAATGGCGCGCTGCGGCATCAAAAACTCGTAAGGCATTT                                                                 >  SRR4302543.7872186/1‑94 (MQ=60)

                              ATGACTTACTGCGGCTTGGGTCACAAAAAGCTCTTCTGCTGCGCGAGTGAAACTTAAATGGCGCGCTGCGGCATCAAAAACTCGTAAGGCATTT                                                                 <  SRR4302543.3506656/94‑1 (MQ=60)

                              ATGACTTACTGCGGCTTGGGTCACAAAAAGCTCTTCTGCTGCGCGAGTGAAACTTAAATGGCGCGCTGCGGCATCAAAAACTCGTAAGGCATTT                                                                 >  SRR4302543.4760822/1‑94 (MQ=60)

                                GACTTACTGCGGCTTGGGTCACAAAAAGCTCTTCTGCTGCGCGAGTGAAACTTAAATGGCGCGCTGCGGCATCAAAAACTCGTAAGGCATTTAG                                                               <  SRR4302543.2064336/94‑1 (MQ=60)

                                GACTTACTGCGGCTTGGGTCACAAAAAGCTCTTCTGCTGCGCGAGTGAAACTTAAATGGCGCGCTGCGGCATCAAAAACTCGTAAGGCATTTAG                                                               >  SRR4302543.4532773/1‑94 (MQ=60)

                                GACTTACTGCGGCTTGGGTCACAAAAAGCTCTTCTGCTGCGCGAGTGAAACTTAAATGGCGCGCTGCGGCATCAAAAACTCGTAAGGCATTTAG                                                               <  SRR4302543.809379/94‑1 (MQ=60)

                                 ACTTACTGCGGCTTGGGTCACAAAAAGCTCTTCTGCTGCGCGAGTGAAACTTAAATGGCGCGCTGCGGCATCAAAAACTCGTAAGGCATTTAGC                                                              <  SRR4302543.6376633/94‑1 (MQ=60)

                                 ACTTACTGCGGCTTGGGTCACAAAAAGCTCTTCTGCTGCGCGAGTGAAACTTAAATGGCGCGCTGCGGCATCAAAAACTCGTAAGGCATTTAGC                                                              <  SRR4302543.17882/94‑1 (MQ=60)

                                 ACTTACTGCGGCTTGGGTCACAAAAAGCTCTTCTGCTGCGCGAGTGAAACTTAAATGGCGCGCTGCGGCATCAAAAACTCGTAAGGCATTTAGC                                                              >  SRR4302543.6390126/1‑94 (MQ=60)

                                 ACTTACTGCGGCTTGGGTCACAAAAAGCTCTTCTGCTGCGCGAGGGAAACTTTAATGGCGCGCTGCGGCATCAAAGAATCGTAAGGCATTTACC                                                              >  SRR4302543.3071956/1‑94 (MQ=60)

                                  CTTACTGCGGCTTGGGTCACAAAAAGCTCTTCTGCTGCGCGAGTGAAACTTAAATGGCGCGCTGCGGCATCAAAAACTCGTAAGGCATTTAGCG                                                             >  SRR4302543.2861092/1‑94 (MQ=60)

                                  CTTACTGCGGCTTGGGTCACAAAAAGCTCTTCTGCTGCGCGAGTGAAACTTAAATGGCGCGCTGCGGCATCAAAAACTCGTAAGGCATTTAGCG                                                             >  SRR4302543.1447479/1‑94 (MQ=60)

                                  CTTACTGCGGCTTGGGTCACAAAAAGCTCTTCTGCTGCGCGAGTGAAACTTAAATGGCGCGCTGCGGCATCAAAAACTCGTAAGGCATTTAGCG                                                             >  SRR4302543.6775771/1‑94 (MQ=60)

                                   TTACTGCGGCTTGGGTCACAAAAAGCTCTTCTGCTGCGCGAGTGAAACTTAAATGGCGCGCTGCGGCATCAAAAACTCGTAAGGCATTTAGCGG                                                            <  SRR4302543.2131959/94‑1 (MQ=60)

                                     ACTGCGGCTTGGGTCACAAAAAGCTCTTCTGCTGCGCGAGTGAAACTTAAATGGCGCGCTGCGGCATCAAAAACTCGTAAGGCATTTAGCGGTG                                                          >  SRR4302543.5836643/1‑94 (MQ=60)

                                          GGCTTGGGTCACAAAAAGCTCTTCTGCTGCGCGAGTGAAACTTAAATGGCGCGCTGCGGCATCAAAAACTCGTAAGGCATTTAGCGGTGGTAAT                                                     >  SRR4302543.1174673/1‑94 (MQ=60)

                                          GGCTTGGGTCACAAAAAGCTCTTCTGCTGCGCGAGTGAAACTTAAATGGCGCGCTGCGGCATCAAAAACTCGTAAGGCATTTAGCGGTGGTAAT                                                     >  SRR4302543.1007946/1‑94 (MQ=60)

                                          GGCTTGGGTCACAAAAAGCTCTTCTGCTGCGCGAGTGAAACTTAAATGGCGCGCTGCGGCATCAAAAACTCGTAAGGCATTTAGCGGTGGTAAT                                                     <  SRR4302543.7813177/94‑1 (MQ=60)

                                          GGCTTGGGTCACAAAAAGCTCTTCTGCTGCGCGAGGGAAACTTAAATGGCGCGCTGCGGCATCAAAAACTCGTAAGGCATTTAGCGGCGGTAAT                                                     >  SRR4302543.7938616/1‑94 (MQ=60)

                                          GACTTGGGTCACAAAAAGCTCTTCTGCTGCGCGAGTGAAACTTAAATGGCGCGCTGCGGCATCAAAAACTCGTAAGGCATTTAGCGGTGGTAAT                                                     <  SRR4302543.5426968/94‑1 (MQ=60)

                                           GCTTGGGTCACAAAAAGCTCTTCTGCTGCGCGAGTGAAACTTAAATGGCGCGCTGCGGCATCAAAAACTCGTAAGGCATTTAGCGGTGGTAATC                                                    <  SRR4302543.6275232/94‑1 (MQ=60)

                                           GCTTGGGTCACAAAAAGCTCTTCTGCTGCGCGAGTGAAACTTAAATGGCGCGCTGCGGCATCAAAAACTCGTAAGGCATTTAGCGGTGGTAATC                                                    <  SRR4302543.184309/94‑1 (MQ=60)

                                           GCTTGGGTCACAAAAAGCTCTTCTGCTGCGCGAGTGAAACTTAAATGGCGCGCTGCGGCATCAAAAACTCGTAAGGCATTTAGCGGTGGTAATC                                                    <  SRR4302543.7273654/94‑1 (MQ=60)

                                            CTTGGGTCACAAAAAGCTCTTCTGCTGCGCGAGTGAAACTTAAATGGCGCGCTGCGGCATCAAAAACTCGTAAGGCATTTAGCGGTGGTAATCG                                                   >  SRR4302543.5233244/1‑94 (MQ=60)

                                            CTTGGGTCACAAAAAGCTCTTCTGCTGCGCGAGTGAAACTTAAATGGCGCGCTGCGGCATCAAAAACTCGTAAGGCATTTAGCGGTGGTAATCG                                                   >  SRR4302543.6939350/1‑94 (MQ=60)

                                            CTTGGGTCACAAAAAGCTCTTCTGCTGCGCGAGTGAAACTTAAATGGCGCGCTGCGGCATCAAAAACTCGTAAGGCATTTAGCGGTGGTAATCG                                                   <  SRR4302543.906759/94‑1 (MQ=60)

                                             TTGAGTCACAAAAAGCTCTTCTGCTGCGCGAGTGAAACTTAAATGGCGCGCTGCGGCATCAAAAACTCGTAAGGCATTTAGCGGTGGTAATCGT                                                  <  SRR4302543.415398/94‑1 (MQ=60)

                                               GGGTCACAAAAAGCTCTTCTGCTGCGCGAGTGAAACTTAAATGGCGCGCTGCGGCATCAAAAACTCGTAAGGCATTTAGCGGTGGTAATCGTTT                                                <  SRR4302543.3461579/94‑1 (MQ=60)

                                               GGGTCACAAAAAGCTCTTCTGCTGCGCGAGTGAAACTTAAATGGCGCGCTGCGGCATCAAAAACTCGTAAGGCATTTAGCGGTGGTAATCGTTT                                                <  SRR4302543.4989994/94‑1 (MQ=60)

                                                GGTCACAAAAAGCTCTTCTGCTGCGCGAGTGAAACTTAAATGGCGTGCTGCGGCATCAAAAACTCGTAAGGCATTTAGCGGTGGTAATCGTTTA                                               <  SRR4302543.7318048/94‑1 (MQ=60)

                                                GGTCACAAAAAGCTCTTCTGCTGCGCGAGTGAAACTTAAATGGCGCGCTGCGGCATCAAAAACTCGTAAGGCATTTAGCGGTGGTAATCGTTTA                                               >  SRR4302543.1388323/1‑94 (MQ=60)

                                                   CACAAAAAGCTCTTCTGCTGCGCGAGTGAAACTTAAATGGCGCGCTGCGGCATCAAAAACTCGTAAGGCATTTAGCGGTGGTAATCGTTTAGAC                                            <  SRR4302543.2730805/94‑1 (MQ=60)

                                                   CACAAAAAGCTCTTCTGCTGCGCGAGTGAAACTTAAATGGCGCGCTGCGGCATCAAAAACTCGTAAGGCATTTAGCGGTGGTAATCGTTTAGAC                                            <  SRR4302543.2730806/94‑1 (MQ=60)

                                                   CACAAAAAGCTCTTCTGCTGCGCGAGTGAAACTTAAATGGCGCGCTGCGGCATCAAAAACTCGTAAGGCATTTAGCGGTGGTAATCGTTTAGAC                                            <  SRR4302543.3829045/94‑1 (MQ=60)

                                                   CACAAAAAGCTCTTCTGCTGCGCGAGTGAAACTTAAATGGCGCGCTGCGGCATCAAAAACTCGTAAGGCATTTAGCGGTGGTAATCGTTTAGAC                                            <  SRR4302543.3829046/94‑1 (MQ=60)

                                                     CAAAAAGCTCTTCTGCTGCGCGAGTGAAACTTAAATGGCGCGCTGCGGCATCAAAAACTCGTAAGGCATTTAGCGGTGGTAATCGTTTAGACAT                                          >  SRR4302543.868060/1‑94 (MQ=60)

                                                     CAAAAAGCTCTTCTGCTGCGCGAGTGAAACTTAAATGGCGCGCTGCGGCATCAAAAACTCGTAAGGCATTTAGCGGTGGTAATCGTTTAGACAT                                          >  SRR4302543.868059/1‑94 (MQ=60)

                                                     CAAAAAGCTCTTCTGCTGCGCGAGTGAAACTTAAATGGCGCGCTGCGGCATCAAAAACTCGTAAGGCATTTAGCGGTGGTAATCGTTTAGACAT                                          <  SRR4302543.6228508/94‑1 (MQ=60)

                                                     CAAAAAGCTCTTCTGCTGCGCGAGTGAAACTTAAATGGCGCGCTGCGGCATCAAAAACTCGTAAGGCATTTAGCGGTGGTAATCGTTTAGACAT                                          <  SRR4302543.3492389/94‑1 (MQ=60)

                                                     CAAAAAGCTCTTCTGCTGCGCGAGTGAAACTTAAATGGCGCGCTGCGGCATCAAAAACTCGTAAGGCATTTAGCGGTGGTAATCGTTTAGACAT                                          <  SRR4302543.2726659/94‑1 (MQ=60)

                                                     CAAAAAGCTCTTCTGCTGCGCGAGTGAAACTTAAATGGCGCGCTGCGGCATCAAAAACTCGTAAGGCATTTAGCGGTGGTAATCGTTTAGACAT                                          >  SRR4302543.6927575/1‑94 (MQ=60)

                                                     CAAAAAGCTCTTCTGCTGCGCGAGTGAAACTTAAATGGCGCGCTGCGGCATCAAAAACGCGTAAGGCATTTAGCGGTGGTAATCGTTTAGACAT                                          <  SRR4302543.5697964/94‑1 (MQ=60)

                                                      AAAAAGCTCTTCTGCTGCGCGAGTGAAACTTAAATGGCGCGCTGCGGCATCAAAAACTCGTAAGGCATTTAGCGGTGGTAATCGTTTAGACATG                                         <  SRR4302543.4218735/94‑1 (MQ=60)

                                                      AAAAAGCTCTTCTGCTGCGCGAGTGAAACTTAAATGGCGCGCTGCGGCATCAAAAACTCGTAAGGCATTTAGCGGTGGTAATCGTTTAGACATG                                         >  SRR4302543.4523847/1‑94 (MQ=60)

                                                      AAAAAGCTCTTCTGCTGCGCGAGTGAAACTTAAATGGCGCGCTGCGGCATCAAAAACTCGTAAGGCATTTAGCGGTGGTAATCGTTTAGACATG                                         <  SRR4302543.646345/94‑1 (MQ=60)

                                                      AAAAAGCTCTTCTGCTGCGCGAGTGAAACTTAAATGGCGCGCTGCGGCATCAAAAACTCGTAAGGCATTTAGCGGTGGTAATCGTTTAGACATG                                         >  SRR4302543.3204847/1‑94 (MQ=60)

                                                       AAAAGCTCTTCTGCTGCGCGAGTGAAACTGAAATGGCGCGCTGCGGCATCAAAAACTCGTAAGGCATTTAGCGGTGGTAATCGTTTAGACATGG                                        <  SRR4302543.3475662/94‑1 (MQ=60)

                                                        AAAGCTCTTCTGCTGCGCGAGTGAAACTTAAATGGCGCGCTGCGGCATCAAAAACTCGTAAGGCATTTAGCGGTGGTAATCGTTTAGACATGGC                                       <  SRR4302543.4820593/94‑1 (MQ=60)

                                                        AAAGCTCTTCTGCTGCGCGAGTGAAACTTAAATGGCGCGCTGCGGCATCAAAAACTCGTAAGGCATTTAGCGGTGGTAATCGTTTAGACATGGC                                       >  SRR4302543.1381646/1‑94 (MQ=60)

                                                        AAAGCTCTTCTGCTGCGCGAGTGAAACTTAAATGGCGCGCTGCGGCATCAAAAACTCGTAAGGCATTTAGCGGTGGTAATCGTTTAGACATGGC                                       <  SRR4302543.7774396/94‑1 (MQ=60)

                                                        AAAGCTCTTCTGCTGCGCGAGTGAAACTTAAATGGCGCGCTGCGGCATCAAAAACTCGTAAGGCATTTAGCGGTGGTAATCGTTTAGACATGGC                                       >  SRR4302543.310645/1‑94 (MQ=60)

                                                         AAGCTCTTCTGCTGCGCGAGTGAAACTTAAATGGCGCGCTGCGGCATCAAAAACTCGTAAGGCATTTAGCGGTGGTAATCGTTTAGACATGGCT                                      <  SRR4302543.2360848/94‑1 (MQ=60)

                                                         AAGCTCTTCTGCTGCGCGAGTGAAACTTAAATGGCGCGCTGCGGCATCAAAAACTCGTAAGGCATTTAGCGGTGGTAATCGTTTAGACATGGCT                                      <  SRR4302543.3155996/94‑1 (MQ=60)

                                                         AAGCTCTTCTGCTGCGCGAGTGAAACTTAAATGGCGCGCTGCGGCATCAAAAACTCGTAAGGCATTTAGCGGTGGTAATCGTTTAGACATGGCT                                      <  SRR4302543.4257483/94‑1 (MQ=60)

                                                         AAGCTCTTCTGCTGCGCGAGTGAAACTTAAATGGCGCGCTGCGGCATCAAAAACTCGTAAGGCATTTAGCGGTGGTAATCGTTTAGACATGGCT                                      >  SRR4302543.7914880/1‑94 (MQ=60)

                                                          AGCTCTTCTGCTGCGCGAGTGAAACTTAAATGGCGCGCTGCGGCATCAAAAACTCGTAAGGCATTTAGCGGTGGTAATCGTTTAGACATGGCTT                                     >  SRR4302543.7917731/1‑94 (MQ=60)

                                                          AGCTCTTCTGCTGCGCGAGTGAAACTTAAATGGCGCGCTGCGGCATCAAAAACTCGTAAGGCATTTAGCGGTGGTAATCGTTTAGACATGGCTA                                     >  SRR4302543.2984180/1‑94 (MQ=60)

                                                           GCTCTTCTGCTGCGCGAGTGAAACTTAAATGGCGCGCTGCGGCATCAAAAACTCGTAAGGCATTTAGCGGTGGTAATCGTTTAGACATGGCTAT                                    >  SRR4302543.1054896/1‑94 (MQ=60)

                                                           GCTCTTCTGCTGCGCGAGTGAAACTTAAATGGCGCGCTGCGGCATCAAAAACTCGTAAGGCATTTAGCGGTGGTAATCGTTTAGACATGGCTAT                                    <  SRR4302543.2936309/94‑1 (MQ=60)

                                                           GCTCTTCTGCTGCGCGAGTGAAACTTAAATGGCGCGCTGCGGCATCAAAAACTCGTAAGGCATTTAGCGGTGGTAATCGTTTAGACATGGCTAT                                    <  SRR4302543.4146519/94‑1 (MQ=60)

                                                           GCTCTTCTGCTGCGCGAGTGAAACTTAAATGGCGCGCTGCGGCATCAAAAACTCGTAAGGCATTTAGCGGTGGTAATCGTTTAGACATGGCTAT                                    <  SRR4302543.6738248/94‑1 (MQ=60)

                                                           GCTCTTCTGCTGCGCGAGTGAAACTTAAATGGCGCGCTGCGGCATCAAAAACTCGTAAGGCATTTAGCGGTGGTAATCGTTTAGACATGGCTAT                                    >  SRR4302543.657469/1‑94 (MQ=60)

                                                            CTCTTCTGCTGCGCGAGTGAAACTTAAATGGCGCGCTGCGGCATCAAAAACTCGTAAGGCATTTAGCGGTGGTAATCGTTTAGACATGGCTATT                                   <  SRR4302543.5785063/94‑1 (MQ=60)

                                                            CTCTTCTGCTGCGCGAGTGAAACTTAAATGGCGCGCTGCGGCATCAAAAACTCGTAAGGCATTTAGCGGTGGTAATCGTTTAGACATGGCTATT                                   >  SRR4302543.6283370/1‑94 (MQ=60)

                                                            CTCTTCTGCTGCGCGAGTGAAACTTAAATGGCGCGCTGCGGCATCAAAAACTCGTAAGGCATTTAGCGGTGGTAATCGTTTAGACATGGCTATT                                   <  SRR4302543.2910341/94‑1 (MQ=60)

                                                             TCTTCTGCTGCGCGAGTGAAACTTAAATGGCGCGCTGCGGCATCAAAAACTCGTAAGGCATTTAGCGGTGGTAATCGTTTAGACATGGCTATTA                                  <  SRR4302543.6268593/94‑1 (MQ=60)

                                                             TCTTCTGCTGCGCGAGTGAAACTTAAATGGCGCGCTGCGGCATCAAAAACTCGTAAGGCATTTAGCGGTGGTAATCGTTTAGACATGGCTATTA                                  <  SRR4302543.2106671/94‑1 (MQ=60)

                                                             TCTTCTGCTGCGCGAGTGAAACTTAAATGGCGCGCTGCGGCATCAAAAACTCGTAAGGCATTTAGCGGTGGTAATCGTTTAGACATGGCTATTA                                  >  SRR4302543.44481/1‑94 (MQ=60)

                                                              CTTCTGCTGCGCGAGTGAAACTTAAATGGCGCGCTGCGGCATCAAAAACTCGTAAGGCATTTAGCGGTGGTAATCGTTTAGAgagtggagatcg                                 >  SRR4302543.2368714/1‑82 (MQ=60)

                                                              CTTCTGCTGCGCGAGTGAAACTTAAATGGCGCGCTGCGGCATCAAAAACTCGTAAGGCATTTAGCGGTGGTAATCGTTTAGACATGGCTATTAA                                 >  SRR4302543.3970283/1‑94 (MQ=60)

                                                              CTTCTGCTGCGCGAGTGAAACTTAAATGGCGCGCTGCGGCATCAAAAACTCGTAAGGCATTTAGCGGTGGTAATCGTTTAGACATGGCTATTAA                                 >  SRR4302543.5326050/1‑94 (MQ=60)

                                                              CTTCTGCTGCGCGAGTGAAACTTAAATGGCGCGCTGCGGCATCAAAAACTCGTAAGGCATTTAGCGGTGGTAATCGTTTAGACATGGCTATTAA                                 <  SRR4302543.2349410/94‑1 (MQ=60)

                                                              CTTCTGCTGCGCGAGGGAGAGTTAAATAGCTCGCTGCGGCATCAAAAACTCGTAAGGCATTTAGCGGTGGTAATCGTTTAGACATGGGTATTAA                                 >  SRR4302543.5326051/1‑94 (MQ=60)

                                                               TTCTGCTGCGCGAGTGAAACTTAAATGGCGCGCTGCGGCATCAAAAACTCGTAAGGCATTTAGCGGTGGTAATCGTTTAGACATGGCTATTAAA                                >  SRR4302543.6653881/1‑94 (MQ=60)

                                                                TCTGCTGCGCGAGTGAAACTTAAATGGCGCGCTGCGGCATCAAAAACTCGTAAGGCATTTAGCGGTGGTAATCGTTTAGACATGGCTATTAAAC                               <  SRR4302543.6550667/94‑1 (MQ=60)

                                                                TCTGCTGCGCGAGTGAAACTTAAATGGCGCGCTGCGGCATCAAAAACTCGTAAGGCATTTAGCGGTGGTAATCGTTTAGACAT‑GCTATTAAACT                              <  SRR4302543.4287223/94‑1 (MQ=60)

                                                                 CTGCTGCGCGAGTGAAACTTAAATGGCGCGCTGCGGCATCAAAAACTCGTAAGGCATTTAGCGGTGGTAATCGTTTAGACATGGCTATTAAACT                              <  SRR4302543.5714960/94‑1 (MQ=60)

                                                                 CTGCTGCGCGAGTGAAACTTAAATGGCGCGCTGCGGCATCAAAAACGCGTAAGGCATTTAGCGGTGGTAATCGTTTAGACATGGCTATTAAACT                              <  SRR4302543.5714963/94‑1 (MQ=60)

                                                                  TGCTGCGCGAGTGAAACTTAAATGGCGCGCTGCGGCATCAAAAACTCGTAAGGCATTTAGCGGTGGTAATCGTTTAGACATGGCTATTAAACTT                             <  SRR4302543.6946845/94‑1 (MQ=60)

                                                                  TGCTGCGCGAGTGAAACTTAAATGGCGCGCTGCGGCATCAAAAACTCGTAAGGCATTTAGCGGTGGTAATCGTTTAGACATGGCTATTAAACTT                             <  SRR4302543.5125592/94‑1 (MQ=60)

                                                                   GCTGCGCGAGTGAAACTTAAATGGCGCGCTGCGGCATCAAAAACTCGTAAGGCATTTAGCGGTGGTAATCGTTTAGACATGGCTATTAAACTTT                            <  SRR4302543.5433201/94‑1 (MQ=60)

                                                                   GCTGCGCGAGTGAAACTTAAATGGCGCGCTGCGGCATCAAAAACTCGTAAGGCATTTAGCGGTGGTAATCGTTTAGACATGGCTATTAAACTTT                            <  SRR4302543.5433199/94‑1 (MQ=60)

                                                                   GCTGCGCGAGTGAAACTTAAATGGCGCGCTGCGGCATCAAAAACTCGTAAGGCATTTAGCGGTGGTAATCGTTTAGACATGGCTATTAAACTTT                            <  SRR4302543.6299908/94‑1 (MQ=60)

                                                                   GCTGCGCGAGGGAAACTTAAATGGCGCGCTGCGGCATCAAAAACTCGTAAGGCATTTAGCGGTGGTAATCGTTTAGACATGGCTATTAAACTTT                            <  SRR4302543.5433200/94‑1 (MQ=60)

                                                                    CTGCGCGAGTGAAACTTAAATGGCGCGCTGCGGCATCAAAAACTCGTAAGGCATTTAGCGGTGGTAATCGTTTAGACATGGCTATTAAACTTTG                           >  SRR4302543.7880082/1‑94 (MQ=60)

                                                                    CTGCGCGAGTGAAACTTAAATGGCGCGCTGCGGCATCAAAAACTCGTAAGGCATTTAGCGGTGGTAATCGTTTAGACATGGCTATTAAACTTTG                           <  SRR4302543.921857/94‑1 (MQ=60)

                                                                    CTGCGCGAGTGAAACTTAAATGGCGCGCTGCGGCATCAAAAACTCGTAAGGCATTTAGCGGTGGTAATCGTTTAGACATGGCTATTAAACTTTG                           >  SRR4302543.3390770/1‑94 (MQ=60)

                                                                    CTGCGCGAGTGAAACTTAAATGGCGCGCTGCGGCATCAAAAACTCGTAAGGCATTTAGCGGTGGTAATCGTTTAGACATGGCTATTAAACTTTG                           >  SRR4302543.2448905/1‑94 (MQ=60)

                                                                     TGCGCGAGTGAAACTTAAATGGCGCGCTGCGGCATCAAAAACTCGTAAGGCATTTAGCGGTGGTAATCGTTTAGACATGGCTATTAAACTTTGA                          >  SRR4302543.4795590/1‑94 (MQ=60)

                                                                     TGCGCGAGTGAAACTTAAATGGCGCGCTGCGGCATCAAAAACTCGTAAGGCATTTAGCGGTGGTAATCGTTTAGACATGGCTATTAAACTTTGA                          >  SRR4302543.2560899/1‑94 (MQ=60)

                                                                      GCGCGAGTGAAACTTAAATGGCGCGCTGCGGCATCAAAAACTCGTAAGGCATTTAGCGGTGGTAATCGTTTAGACATGGCTATTAAACTTTGAT                         <  SRR4302543.4325380/94‑1 (MQ=60)

                                                                       CGCGAGTGAAACTTAAATGGCGCGCTGCGGCATCAAAAACTCGTAAGGCATTTAGCGGTGGTAATCGTTTAGACATGGCTATTAAACTTTGATG                        >  SRR4302543.4526408/1‑94 (MQ=60)

                                                                         CGAGTGAAACTTAAATGGCGTGCTGCGGCATCAAAAACTCGTAAGGCATTTAGCGGTGGTAATCGTTTAGACATGGCTATTAAACTTTGATGTT                      >  SRR4302543.1065129/1‑94 (MQ=60)

                                                                         CGAGTGAAACTTAAATGGCGCGCTGCGGCATCAAAAACTCGTAAGGCATTTAGCGGTGGTAATCGTTTAGACATGGCTATTAAACTTTGATGTT                      <  SRR4302543.149335/94‑1 (MQ=60)

                                                                         CGAGTGAAACTTAAATGGCGCGCTGCGGCATCAAAAACTCGTAAGGCATTTAGCGGTGGTAATCGTTTAGACATGGCTATTAAACTTTGATGTT                      >  SRR4302543.2107685/1‑94 (MQ=60)

                                                                         CGAGTGAAACTTAAATGGCGCGCTGCGGCATCAAAAACTCGTAAGGCATTTAGCGGTGGTAATCGTTTAGACATGGCTATTAAACTTTGATGTT                      <  SRR4302543.821043/94‑1 (MQ=60)

                                                                         CGAGTGAAACTTAAATGGCGCGCTGCGGCATCAAAAACTCGTAAGGCATTTAGCGGTGGTAATCGTTTAGACATGGCTATTAAACTTTGATGTT                      >  SRR4302543.6991753/1‑94 (MQ=60)

                                                                         CGAGTGAAACTTAAATGGCGCGCTGCGGCATCAAAAACTCGTAAGGCACTTAGCGGTGGTAATCGTTTAGACATGGCTATTAAACTTTGATGTT                      <  SRR4302543.1355976/94‑1 (MQ=60)

                                                                           AGTGAAACTTAAATGGCGCGCTGCGGCATCAAAAACTCGTAAGGCATTTAGCGGTGGTAATCGTTTAGACATGGCTATTAAACTTTGATGTTAA                    >  SRR4302543.3315674/1‑94 (MQ=60)

                                                                            GTGAAACTTAAATGGCGCGCTGCGGCATCAAAAACTCGTAAGGCATTTAGCGGTGGTAATCGTTTAGACATGGCTATTAAACTTTGATGTTAAA                   <  SRR4302543.1469907/94‑1 (MQ=60)

                                                                            GTGAAACTTAAATGGCGCGCTGCGGCATCAAAAACTCGTAAGGCATTTAGCGGTGGTAATCGTTTAGACATGGCTATTAAACTTTGATGTTAAA                   >  SRR4302543.1705622/1‑94 (MQ=60)

                                                                            GTGAAACTTAAATGGCGCGCTGCGGCATCAAAAACTCGTAAGGCATTTAGCGGTGGTAATCGTTTAGACATGGCTATTAAACTTTGATGTTAAA                   >  SRR4302543.3033048/1‑94 (MQ=60)

                                                                            GTGAAACTTAAATGGCGCGCTGCGGCATCAAAAACTCGTAAGGCATTTAGCGGTGGTAATCGTTTAGACATGGCTATTAAACTTTGATGTTAAA                   <  SRR4302543.7159032/94‑1 (MQ=60)

                                                                             TGAAACTTAAATGGCGCGCTGCGGCATCAAAAGCTCGTAAGGCATTTAGCGGTGGTAATCGTTTAGACATGGCTATTAAACTTTGATGTTAAAT                  <  SRR4302543.3721997/94‑1 (MQ=60)

                                                                             TGAAACTTAAATGGCGCGCTGCGGCATCAAAAACTCGTAAGGCATTTAGCGGTGGTAATCGTTTAGACATGGCTATTAAACTTTGATGTTAAAT                  <  SRR4302543.4162830/94‑1 (MQ=60)

                                                                             TGAAACTTAAATGGCGCGCTGCGGCATCAAAAACTCGTAAGGCATTTAGCGGTGGTAATCGTTTAGACATGGCTATTAAACTTTGATGTTAAAT                  <  SRR4302543.1664479/94‑1 (MQ=60)

                                                                             TGAAACTTAAATGGCGCGCTGCGGCATCAAAAACTCGTAAGGCATTTAGCGGTGGTAATCGTTTAGACATGGCTATTAAACTTTGATGTTAAAT                  <  SRR4302543.3311535/94‑1 (MQ=60)

                                                                             TGAAACTTAAATGGCGCGCTGCGGCATCAAAAACGCGTAAGGCATTTAGCGGTGGTAATCGTTTAGACATGGCTATTAAACTTTGATGTTAAAT                  <  SRR4302543.4162829/94‑1 (MQ=60)

                                                                               AAACTTAAATGGCGCGCTGCGGCATCAAAAACTCGTAAGGCATTTAGCGGTGGTAATCGTTTAGACATGGCTATTAAACTTTGATGTTAAATGA                >  SRR4302543.6355040/1‑94 (MQ=60)

                                                                               AAACTTAAATGGCGCGCTGCGGCATCAAAAACTCGTAAGGCATTTAGCGGTGGTAATCGTTTAGACATGGCTATTAAACTTTGATGTTAAATGA                <  SRR4302543.7420184/94‑1 (MQ=60)

                                                                                AACTTAAATGGCGCGCTGCGGCATCAAAAACTCGTAAGGCATTTAGCGGTGGTAATCGTTTAGACATGGCTATTAAACTTTGATGTTAAATGAA               >  SRR4302543.1320490/1‑94 (MQ=60)

                                                                                AACTTAAATGGCGCGCTGCGGCATCAAAAACTCGTAAGGCATTTAGCGGTGGTAATCGTTTAGACATGGCTATTAAACTTTGATGTTAAATGAA               <  SRR4302543.836123/94‑1 (MQ=60)

                                                                                AACTTAAATGGCGCGCTGCGGCATCAAAAACTCGTAAGGCATTTAGCGGTGGTAATCGTTTAGACATGGCTATTAAACTTTGATGTTAAATGAA               <  SRR4302543.6537316/94‑1 (MQ=60)

                                                                                 ACTTAAATGGCGCGCTGCGGCATCAAAAACTCGTAAGGCATTTAGCGGTGGTAATCGTTTAGACATGGCTATTAAACTTTGATGTTAAATGAAT              >  SRR4302543.890855/1‑94 (MQ=60)

                                                                                 ACTTAAATGGCGCGCTGCGGCATCAAAAACTCGTAAGGCATTTAGCGGTGGTAATCGTTTAGACATGGCTATTAAACTTTGATGTTAAATGAAT              >  SRR4302543.3634056/1‑94 (MQ=60)

                                                                                  CTTAAATGGCGCGCTGCGGCATCAAAAACTCGTAAGGCATTTAGCGGTGGTAATCGTTTAGACATGGCTATTAAACTTTGATGTTAAATGAATT             >  SRR4302543.1227303/1‑94 (MQ=60)

                                                                                  CTTAAATGGCGCGCTGCGGCATCAAAAACTCGTAAGGCATTTAGCGGTGGTAATCGTTTAGACATGGCTATTAAACTTTGATGTTAAATGAATT             <  SRR4302543.1133676/94‑1 (MQ=60)

                                                                                    TAAATGGCGCGCTGCGGCATCAAAAACTCGTAAGGCATTTAGCGGTGGTAATCGTTTAGACATGGCTATTAAACTTTGATGTTAAATGAATTTA           >  SRR4302543.4398814/1‑94 (MQ=60)

                                                                                    TAAATGGCGCGCTGCGGCATCAAAAACTCGTAAGGCATTTAGCGGTGGTAATCGTTTAGACATGGCTATTAAACTTTGATGTTAAATGAATTTA           <  SRR4302543.4832083/94‑1 (MQ=60)

                                                                                      AATGGCGCGCTGCGGCATCAAAAACTCGTAAGGCATTTAGCGGTGGTAATCGTTTAGACATGGCTATTAAACTTTGATGTTAAATGAATTTAAC         >  SRR4302543.7781954/1‑94 (MQ=60)

                                                                                       ATGGCGCGCTGCGGCATCAAAAACTCGTAAGGCATTTAGCGGTGGTAATCGTTTAGACATGGCTATTAAACTTTGATGTTAAATGAATTTAACA        <  SRR4302543.4829908/94‑1 (MQ=60)

                                                                                        TGGCGCGCTGCGGCATCAAAAACTCGTAAGGCATTTAGCGGTGGTAATCGTTTAGACATGGCTATTAAACTTTGATGTTAAATGAATTTAACAA       <  SRR4302543.3007607/94‑1 (MQ=60)

                                                                                        TGGCGCGCTGCGGCATCAAAAACTCGTAAGGCATTTAGCGGTGGTAATCGTTTAGACATGGCTATTAAACTTTGATGTTAAATGAATTTAACAA       <  SRR4302543.2606611/94‑1 (MQ=60)

                                                                                        TGGCGCGCTGCGGCATCAAAAACTCGTAAGGCATTTAGCGGTGGTAATCGTTTAGACATGGCTATTAAACTTTGATGTTAAATGAATTTAACAA       <  SRR4302543.5645834/94‑1 (MQ=60)

                                                                                        TGGCGCGCTGCGGCATCAAAAACTCGTAAGGCATTTAGCGGTGGTAATCGTTTAGACATGGCTATTAAACTTTGATGTTAAATGAATTTAACAA       >  SRR4302543.4357599/1‑94 (MQ=60)

                                                                                         GGCGCGCTGCGGCATCAAAAACTCGTAAGGCATTCAGCGGTGGTAATCGTTTAGACATGGCTATTAAACTTTGATGTTAAATGAATTTAACAAT      <  SRR4302543.4877400/94‑1 (MQ=60)

                                                                                          GCGCGCTGCGGCATCAAAAACTCGTAAGGCATTTAGCGGTGGTAATCGTTTAGACATGGCTATTAAACTTTGATGTTAAATGAATTTAACAATT     <  SRR4302543.1198192/94‑1 (MQ=60)

                                                                                          GCGCGCTGCGGCATCAAAAACTCGTAAGGCATTTAGCGGTGGTAATCGTTTAGACATGGCTATTAAACTTTGATGTTAAATGAATTTAACAATT     <  SRR4302543.5587480/94‑1 (MQ=60)

                                                                                          GCGCGCTGCGGCATCAAAAACTCGTAAGGCATTTAGCGGTGGTAATCGTTTAGACATGGCTATTAAACTTTGATGTTAAATGAATTTAACAATT     <  SRR4302543.2440213/94‑1 (MQ=60)

                                                                                           CGCGCTGCGGCATCAAAAACTCGTAAGGCATTTAGCGGTGGTAATCGTTTAGACATGGCTATTAAACTTTGATGTTAAATGAATTTAACAATTA    <  SRR4302543.5205070/94‑1 (MQ=60)

                                                                                           CGCGCTGCGGCATCAAAAACTCGTAAGGCATTTAGCGGTGGTAATCGTTTAGACATGGCTATTAAACTTTGATGTTAAATGAATTTAACAATTA    <  SRR4302543.4992976/94‑1 (MQ=60)

                                                                                            GCGCTGCGGCATCAAAAACTCGTAAGGCATTTAGCGGTGGTAATCGTTTAGACATGGCTATTAAACTTTGATGTTAAATGAATTTAACAATTAG   <  SRR4302543.1319511/94‑1 (MQ=60)

                                                                                            GCGCTGCGGCATCAAAAACTCGTAAGGCATTTAGCGGTGGTAATCGTTTAGACATGGCTATTAAACTTTGATGTTAAATGAATTTAACAATTAG   <  SRR4302543.4639410/94‑1 (MQ=60)

                                                                                            GCGCTGCGGCATCAAAAACTCGTAAGGCATTTAGCGGTGGTAATCGTTTAGACATGGCTATTAAACTTTGATGTTAAATGAATTTAACAATTAG   <  SRR4302543.4453811/94‑1 (MQ=60)

                                                                                            GCGCTGCGGCATCAAAAACTCGTAAGGCATTTAGCGGTGGTAATCGTTTAGACATGGCTATTAAACTTTGATGTTAAATGAATTTAACAATTAG   <  SRR4302543.3490683/94‑1 (MQ=60)

                                                                                             CGCTGCGGCATCAAAAACTCGTAAGGCATTTAGCGGTGGTAATCGTTTAGACATGGCTATTAAACTTTGATGTTAAATGAATTTAACAATTAGA  <  SRR4302543.3302269/94‑1 (MQ=60)

CCCCAAAAAATCCTCAAGAGACTTGATTTGATGACTTACTGCGGCTTGGGTCACAAAAAGCTCTTCTGCTGCGCGAGTGAAACTTAAATGGCGTGCTGCGGCATCAAAAACTCGTAAGGCATTTAGCGGTGGTAATCGTTTAGACATGGCTATTAAACTTTGATGTTAAATGAATTTAACAATTAGA  >  NC_000913/2940443‑2940629

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 0 ≤` `ATCG/ATCG` `< 13 ≤` `ATCG/ATCG` `< 29 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`