Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.

ALE, Flask, Isolate	Predicted Mutations	Mean Coverage	Total Reads	Percent Mapped	Mapped Reads	Average Read Length
A1 F1 I1 R1	1696	279.3	15874187	97.8%	15524954	93.0

Breseq alignment

BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	2,941,864	T→C	M169T (ATG→ACG)	b2810 →	hypothetical protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	2,941,864	0	T	C	99.0%	904.7 / ‑2.0	290	M169T (ATG→ACG)	b2810	hypothetical protein
Reads supporting (aligned to +/- strand): ref base T (2/1); new base C (149/138); total (151/139)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 6.38e-01

Only 100 of 299 total aligned reads displayed.

AATTGCCGCTTAATGCGCAGCGACTGCCGGATGTCGATTTGTTGCCAGAACTGATTACTCCCCGTAGTCGGATTCTGGCGTTGGGTCAGATGTCGAACGTTACTGGCGGTTGCCCGGATCTGGCGCGAGCGATTACCTTTGCTCATTCAGCCGGGATGGTGGTGATGGTTGATGGTGCTC  >  NC_000913/2941774‑2941953

aaTTGCCGCTTAATGCGCAGCGACTGCCGGATGTCGATTTGTTGCCAGAACTGATTACTCCCCGTAGTCGGATTCTGGCGTTGGGTCAGACGt                                                                                         >  2:4751467/1‑93 (MQ=255)

aaTTGCCGCTTAATGCGCAGCGACTGCCGGATGTCGATTTGTTGCCAGAACTGATTACTCCCCGTAGTCGGATTCTGGCGTTGGGTCAGACGt                                                                                         <  1:4553296/93‑1 (MQ=255)

aaTTGCCGCTTAATGCGCAGCGACTGCCGGATGTCGATTTGTTGCCAGAACTGATTACTCCCCGTAGTCGGATTCTGGCGTTGGGTCAGACGt                                                                                         >  1:1801233/1‑93 (MQ=255)

aaTTGCAGCTTAATGCGCAGCGACTGCCGGATGTCGATTTGTTGCCAGAACTGATTACTCCCCGTAGTCGGATTCTGGCGTTGGGTCAGACGt                                                                                         <  1:2032657/93‑1 (MQ=255)

 aTTGCCGCTTAATGCGCAGCGACTGCCGGATGTCGATTTGTTGCCAGAACTGATTACTCCCCGTAGTCGGATTCTGGCGTTGGGTCAGACGTc                                                                                        <  2:3541369/93‑1 (MQ=255)

  ttGCCGCTTAATGCGCAGCGACTGCCGGATGTCGATTTGTTGCCAGAACTGATTACTCCCCGTAGTCGGATTCTGGCGTTGGGTCAGACGTCg                                                                                       >  2:2337095/1‑93 (MQ=255)

   tGCCGCTTAATGCGCAGCGACTGCCGGATGTCGATTTGTTGCCAGAACTGATTACTCCCCGTAGTCGGATTCTGGCGTTGGGTCAGACGTCGa                                                                                      <  1:3448863/93‑1 (MQ=255)

    gCCGCTTAATGCGCAGCGACTGCCGGATGTCGATTTGTTGCCAGAACTGATTACTCCCCGTAGTCGGATTCTGGCGTTGGGTCAGACGTCGaa                                                                                     <  2:5693407/93‑1 (MQ=255)

    gCCGCTTAATGCGCAGCGACTGCCGGATGTCGATTTGTTGCCAGAACTGATTACTCCCCGTAGTCGGATTCTGGCGTTGGGTCAGACGTCGaa                                                                                     <  2:531518/93‑1 (MQ=255)

     ccGCTTAATGCGCAGCGACTGCCGGATGTCGATTTGTTGCCAGAACTGATTACTCCCCGTAGTCGGATTCTGGCGTTGGGTCAGACGTCGAAc                                                                                    <  2:223141/93‑1 (MQ=255)

      cGCTTAATGCGCAGCGACTGCCGGATGTCGATTTGTTGCCAGAACTGATTACTCCCCGTAGTCGGATTCTGGCGTTGGGTCAGACGTCGAACg                                                                                   >  1:6373921/1‑93 (MQ=255)

      cGCTTAATGCGCAGCGACTGCCGGATGTCGATTTGTTGCCAGAACTGATTACTCCCCGTAGTCGGATTCTGGCGTTGGGTCAGACGTCGAACg                                                                                   >  1:4742394/1‑93 (MQ=255)

       gCTTAATGCGCAGCGACTGCCGGATGTCGATTTGTTGCCAGAACTGATTACTCCCCGTAGTCGGATTCTGGCGTTGGGTCAGACGTCGAACGt                                                                                  >  1:1239671/1‑93 (MQ=255)

       gCTTAATGCGCAGCGACTGCCGGATGTCGATTTGTTGCCAGAACTGATTACTCCCCGTAGTCGGATTCTGGCGTTGGGTCAGACGTCGAACGt                                                                                  >  2:7868084/1‑93 (MQ=255)

         ttAATGCGCAGCGACTGCCGGATGTCGATTTGTTGCCAGAACTGATTACTCCCCGTAGTCGGATTCTGGCGTTGGGTCAGACGTCGAACGTTa                                                                                <  2:1854730/93‑1 (MQ=255)

             tGCGCAGCGACTGCCGGATGTCGATTTGTTGCCAGAACTGATTACTCCCCGTAGTCGGATTCTGGCGTTGGGTCAGACGTCGAACGTTACTgg                                                                            >  1:6482857/1‑93 (MQ=255)

              gcgcAGCGACTGCCGGATGTCGATTTGTTGCCAGAACTGATTACTCCCCGTAGTCGGATTCTGGCGTTGGGTCAGACGTCGAACGTTACTGGc                                                                           <  1:3846470/93‑1 (MQ=255)

                gcAGCGACTGCCGGATGTCGATTTGTTGCCAGAACTGATTACTCCCCGTAGTCGGATTCTGGCGTTGGGTCAGACGTCGAACGTTACTGGCgg                                                                         >  2:2725232/1‑93 (MQ=255)

                 cAGCGACTGCCGGATGTCGATTTGTTGCCAGAACTGATTACTCCCCGTAGTCGGATTCTGGCGTTGGGTCAGACGTCGAACGTTACTGGCGGt                                                                        >  1:3081951/1‑93 (MQ=255)

                 cAGCGACTGCCGGATGTCGATTTGTTGCCAGAACTGATTACTCCCCGTAGTCGGATTCTGGCGTTGGGTCAGACGTCGAACGTTACTGGCGGt                                                                        >  2:1326342/1‑93 (MQ=255)

                  aGCGACTGCCGGATGTCGTTTTGTTGCCAGAACTGATTACTCCCCGTAGTCGGATTCTTGCGTTGGGCCAGACGTCAAACGTTAACGGGGGtt                                                                       >  1:1955389/1‑93 (MQ=255)

                  aGCGACTGCCGGATGTCGATTTGTTGCCAGAACTGATTACTCCCCGTAGTCGGATTCTGGCGTTGGGTCAGACGTCGAACGTTACTGGCgggt                                                                       >  1:2123085/1‑91 (MQ=255)

                  aGCGACTGCCGGATGTCGATTTGTTGCCAGAACTGATTACTCCCCGTAGTCGGATTCTGGCGTTGGGTCAGACGTCGAACGTTACTGGCGGtt                                                                       <  2:6925117/93‑1 (MQ=255)

                  aGCGACTGCCGGATGTCGATTTGTTGCCAGAACTGATTACTCCCCGTAGTCGGATTCTGGCGTTGGGTCAGACGTCGAACGTTACTGGCGGtt                                                                       >  2:340579/1‑93 (MQ=255)

                  aGCGACTGCCGGATGTCGATTTGTTGCCAGAACTGATTACTCCCCGTAGTCGGATTCTGGCGTTGGGTCAGACGTCGAACGTTACTGGCGGtt                                                                       <  1:5348347/93‑1 (MQ=255)

                  aGCGACTGCCGGATGTCGATTTGTTGCCAGAACTGATTACTCCCCGTAGTCGGATTCTGGCGTTGGGTCAGACGCCGAACGTTACTGGCGGtt                                                                       >  1:5813912/1‑93 (MQ=255)

                    cGACTGCCGGATGTCGATTTGTTGCCAGAACTGATTACTCCCCGTAGTCGGATTCTGGCGTTGGGTCAGACGTCGAACGTTACTGGCGGTTGc                                                                     >  1:3350882/1‑93 (MQ=255)

                     gACTGCCGGATGTCGATTTGTTGCCAGAACTGATTACTCCCCGTAGTCGGATTCTGGCGTTGGGTCAGACGTCGAACGTTACTGGCGGTTGcc                                                                    >  2:6410476/1‑93 (MQ=255)

                      aCTGCCGGATGTCGATTTGTTGCCAGAACTGATTACTCCCCGTAGTCGGATTCTGGCGTTGGGTCAGACGTCGAACGTTACTGGCGGTTGccc                                                                   <  2:45065/93‑1 (MQ=255)

                      aCTGCCGGATGTCGATTTGTTGCCAGAACTGATTACTCCCCGTAGTCGGATTCTGGCGTTGGGTCAGACGTCGAACGTTACTGGCGGTTGccc                                                                   <  2:3855287/93‑1 (MQ=255)

                       cTGCCGGATGTCGATTTGTTGCCAGAACTGATTACTCCCCGTAGTCGGATTCTGGCGTTGGGTCAGACGTCGAACGTTACTGGCGGTTGcgcg                                                                  >  2:344722/1‑93 (MQ=255)

                       cTGCCGGATGTCGATTTGTTGCCAGAACTGATTACTCCCCGTAGTCGGATTCTGGCGTTGGGTCAGACGTCGAACGTTACTGGCGGTTGCCCg                                                                  <  1:7392084/93‑1 (MQ=255)

                         gCCGGATGTCGATTTGTTGCCAGAACTGATTACTCCCCGTAGTCGGATTCTGGCGTTGGGTCAGACGTCGAACGTTACTGGCGGTTGCCCGGa                                                                >  2:1994955/1‑93 (MQ=255)

                         gCCGGATGTCGATTTGTTGCCAGAACTGATTACTCCCCGTAGTCGGATTCTGGCGTTGGGTCAGACGTCGAACGTTACTGGCGGTTGCCCGGa                                                                >  2:600299/1‑93 (MQ=255)

                         gCCGGATGTCGATTTGTTGCCAGAACTGATTACTCCCCGTAGTCGGATTCTGGCGTTGGGTCAGACGTCGAACGTTACTGGCGGTTGCCCGGa                                                                >  1:2616929/1‑93 (MQ=255)

                          ccGGATGTCGATTTGTTGCCAGAACTGATTACTCCCCGTAGTCGGATTCTGGCGTTGGGTCAGACGTCGAACGTTACTGGCGGTTGCCCGGAt                                                               >  1:3729356/1‑93 (MQ=255)

                          ccGGATGTCGATTTGTTGCCAGAACTGATTACTCCCCGTAGTCGGATTCTGGCGTTGGGTCAGACGTCGAACGTTACTGGCGGTTGCCCGGAt                                                               <  1:6914664/93‑1 (MQ=255)

                             gATGTCGATTTGTTGCCAGAACTGATTACTCCCCGTAGTCGGATTCTGGCGTTGGGTCAGACGTCGAACGTTACTGGCGGTTGCCCGGATCTg                                                            <  2:1461600/93‑1 (MQ=255)

                             gATGTCGATTTGTTGCCAGAACTGATTACTCCCCGTAGTCGGATTCTGGCGTTGGGTCAGACGTCGAACGTTACTGGCGGTTGCCCGCATCTg                                                            >  2:2388307/1‑93 (MQ=255)

                              aTGTCGATTTGTTGCCAGAACTGATTACTCCCCGTAGTCGGATTCTGGCGTTGGGTCAGACGTCGAACGTTACTGGCGGTTGCCCGGATCTgg                                                           >  1:4115787/1‑93 (MQ=255)

                               tGTCGATTTGTTGCCAGAACTGACTACTCCCCGTAGTCGGATTCTGGCGTTGGGTCAGACGTCGAACGTTACTGGCGGTTGCCCGGATCTGgc                                                          <  2:4282594/93‑1 (MQ=255)

                                gTCGATTTGTTGCCAGAACTGATTACTCCCCGTAGTCGGATTCTTGCGTTGGGTCAGACGTCGAACGTTACTGGCGGTTGCCCGGAGCTgggg                                                         >  2:1793864/1‑91 (MQ=255)

                                   gATTTGTTGCCAGAACTTATTACTCCCCGTAGTCGGATTCTGGCGTTGGGTCAGACGTCGAACGTTACTGGCGGTTGCCCGGATCTGGCgcga                                                      <  1:5277230/93‑1 (MQ=255)

                                   gATTTGTTGCCAGAACTGATTACTCCCCGTAGTCGGATTCTGGCGTTGGGTCAGACGTCGAACGTTACTGGCGGTTGCCCGGATCTGGCgcga                                                      <  2:881415/93‑1 (MQ=255)

                                   gATTTGTTGCCAGAACTGATTACTCCCCGTAGTCGGATTCTGGCGTTGGGTCAGACGTCGAACGTTACTGGCGGTTGCCCGGATCTGGCgcga                                                      <  1:6743101/93‑1 (MQ=255)

                                   gATTTGTTGCCAGAACTGATTACTCCCCGTAGTCGGATTCTGGCGTTGGGTCAGACGTCGAACGTTACTGGCGGTTGCCCGGATCTGGCgcga                                                      <  1:2488703/93‑1 (MQ=255)

                                    aTTTGTTGCCAGAACTGATTACTCCCCGTAGTCGGATTCTGGCGTTGGGTCAGACGTCGAACGTTACTGGCGGTTGCCCGGATCTGGCgcgag                                                     >  2:5427342/1‑93 (MQ=255)

                                     tttGTTGCCAGAACTGATTACTCCCCGTAGTCGGATTCTGGCGTTGGGTCAGACGTCGAACGTTACTGGCGGTTGCCCGGATCTGGCgcgagg                                                    >  2:6674966/1‑92 (MQ=255)

                                     tttGTTGCCAGAACTGATTACTCCCCGTAGTCGGATTCTGGCGTTGGGTCAGACGTCGAACGTTACTGGCGGTTGCCCGGATCTGGCgcgagc                                                    >  2:3991309/1‑93 (MQ=255)

                                     tttGTTGCCAGAACTGATTACTCCCCGTAGTCGGATTCTGGCGTTGGGTCAGACGTAGAACGTTACTGGCGGGTGCCCGGTTTCGGCgcgagc                                                    >  2:1714040/1‑93 (MQ=255)

                                      ttgttgCCAGAACTGATTACTCCCCGTAGTCGGATTCTGGCGTTGGGTCAGACGTCGAACGTTACTGGCGGTTGCCCGGATCTGGCgcgagcg                                                   <  2:5864424/93‑1 (MQ=255)

                                       tgttgCCAGAACTGATTACTCCCCGTAGTCGGATTCTGGCGTTGGGTCAGACGTCGAACGTTACTGGCGGTTGCCCGGATCTGGCgcgagcga                                                  <  1:6065824/93‑1 (MQ=255)

                                         ttgCCAGAACTGATTACTCCCCGTAGTCGGATTCTGGCGTTGGGTCAGACGTCGAACGTTACTGGCGGTTGCCCGGATCTGGCGCGAGCGAtt                                                >  1:641022/1‑93 (MQ=255)

                                          tgCCAGAACTGATTACTCCCCGTAGTCGGATTCTGGCGTTGGGTCAGACGTCGAACGTTACTGGCGGTTGCCCGGATCTGGCGCGAGCGATTa                                               <  2:5148626/93‑1 (MQ=255)

                                          tgCCAGAACTGATTACTCCCCGTAGTCGGATTCTGGCGTTGGGTCAGACGTCGAACGTTACTGGCGGTTGCCCGGATCTGGCGCGAGCGATTa                                               <  2:3232953/93‑1 (MQ=255)

                                            ccAGAACTGATTACTCCCCGTAGTCGGATTCTGGCGTTGGGTCAGACGTCGAACGTTACTGGCGGTTGCCCGGATCTGGCGCGAGCGATTAcc                                             <  2:917577/93‑1 (MQ=255)

                                             cAGAGCTGATTACTCCCCGTAGTCGGATTCTGGCGTTGGGTCAGACGTCGAACGTTACTGGCGGTTGCCCGGATCTGGCGCGAGCGATTACCt                                            >  1:1630400/1‑93 (MQ=255)

                                             cAGAACTGATTACTCCCCGTAGTCGGATTCTGGCGTTGGGTCAGACGTCGAACGTTACTGGCGGTTGCCCGGATCTGGCGCGAGCGATTACCt                                            <  1:1286645/93‑1 (MQ=255)

                                              aGAACTGATTACTCCCCGTAGTCGGATTCTGGCGTTGGGTCAGACGTCGAACGTTACTGGCGGTTGCCCGGTTCTGGCGGGAGCGATTACCtt                                           >  1:2600486/1‑93 (MQ=255)

                                              aGAACTGATTACTCCCCGTAGTCGGATTCTGGCGTTGGGTCAGACGTCGAACGTTACTGGCGGTTGCCCGGATCTGGCGCGAGCGATTACCtt                                           >  2:6974982/1‑93 (MQ=255)

                                                  cTGATTACTCCCCGTAGTCGGATTCTGGCGTTGGGTCAGACGTCGAACGTTACTGGCGGTTGCCCGGATCTGGCGCGCGCGATTACCTTTGCt                                       >  1:2548765/1‑93 (MQ=255)

                                                    gATTACTCCCCGTAGTCGGATTCTGGCGTTGGGTCAGACGTCGAACGTTACTGGCGGTTGCCCGGATCTGGGGCGAGCGATTACCTTTGCTct                                     >  2:7904764/1‑92 (MQ=255)

                                                    gATTACTCCCCGTAGTCGGATTCTGGCGTTGGGTCAGACGTCGAACGTTACTGGCGGTTGCCCGGATCTGGCGCGAGCGATTACCTTTGCTCa                                     >  1:2662880/1‑93 (MQ=255)

                                                     aTTACTCCCCGTAGTCGGATTCTGGCGTTGGGTCAGACGTCGAACGTTACTGGCGGTTGCCCGGATCTGGCGCGAGCGATTACCTTTGCTCAt                                    <  1:4254876/93‑1 (MQ=255)

                                                      ttACTCCCCGTAGTCGGATTCTGGCGTTGGGTCAGACGTCGAACGTTACTGGCGGTTGCCCGGATCTGGCGCGAGCGATTACCTTTGCTCAtt                                   <  1:3988015/93‑1 (MQ=255)

                                                      ttACTCCCCGTAGTCGGATTCTGGCGTTGGGTCAGACGTCGAACGTTACTGGCGGTTGCCCGGATCTGGCGCGAGCGATTACCTTTGCTCAtt                                   <  1:2943749/93‑1 (MQ=255)

                                                        aCTCCCCGTAGTCGGATTCTGGCGTTGGGTCAGACGTCGAACGTTACTGGCGGTTGCCCGGATCTGGCGCGAGCGATTACCTTTGCTCATTCa                                 >  1:3584621/1‑93 (MQ=255)

                                                         cTCCCCGTAGTCGGATTCTGGCGTTGGGTCAGACGTCGAACGTTACTGGCGGTTGCCCGGCTCTGGCGCGAGCGATTACCTTTGCTCATTCac                                >  1:5047027/1‑92 (MQ=255)

                                                         cTCCCCGTAGTCGGATTCTGGCGTTGGGTCAGACGTCGAACGTTACTGGCGGTTGCCCGGATCTGGCGCGAGCGATTACCTTTGCTCATTCAg                                >  2:740422/1‑93 (MQ=255)

                                                          cccccGTAGTCGGATTCTGGCGTTGGGTCAGACGTCGAACGTTACTGGCGGTTGCCCGGATCTGGCGCGAGCGATTACCTTTGCTCATTCAGc                               <  1:1738206/92‑1 (MQ=255)

                                                           ccccGTAGTCGGATTCTGGCGTTGGGTCAGACGTCGAACGTTACTGGCGGTTGCCCGGATCTGGCGCGAGCGATTACCTTTGCTCATTCAGcc                              >  2:7519992/1‑93 (MQ=255)

                                                            cccGTAGTCGGATTCTGGCGTTGGGTCAGACGTCGAACGTTACTGGCGGTTGCCCGGATCTGGCGCGAGCGATTACCTTTGCTCATTCAGCCg                             >  2:7640873/1‑93 (MQ=255)

                                                              cGTAGTCGGATTCTGGCGTTGGGTCAGACGTCGAACGTTACTGGCGGTTGCCCGGATCTGGCGCGAGCGATTACCTTTGCTCATTCAGCCggg                           <  2:2810672/93‑1 (MQ=255)

                                                                tAGTCGGATTCTGGCGTTGGGTCAGACGTCGAACGTTACTGGCGGTTGCCCGGATCTGGCGCGGGCGATTACCTTTGCTCATTCAGCCGGGag                         >  1:5596646/1‑92 (MQ=255)

                                                                tAGTCGGATTCTGGCGTTGGGTCAGACGTCGAACGTTACTGGCGGTTGCCCGGATCTGGCGCGAGCGATTACCTTTGCTCATTCAGCCGGGAt                         >  1:7756123/1‑93 (MQ=255)

                                                                 aGTCGGATTCTGGCGTTGGGTCAGACGTCGAACGTTACTGGCGGTTGCCCGGATCTGGCGCGAGCGATTACCTTTGCTCATTCAGCCGGGAtg                        >  1:844174/1‑93 (MQ=255)

                                                                  gTCGGATTCTGGCGTTGGGTCAGACGTCGAACGTTACTGGCGGTTGCCCGGATCTGGCGCGAGCGATTACCTTTGCTCATTCAGCCGGGAtgg                       <  1:7912145/93‑1 (MQ=255)

                                                                   tCGGATTCTGGCGTTGGGTCAGACGTCGAACGTTACTGGCGGTTGCCCGGATCTGGCGCGAGCGATTACCTTTGCTCATTCAGCCGGGAtggt                      <  2:4997865/93‑1 (MQ=255)

                                                                   tCGGATTCTGGCGTTGGGTCAGACGTCGAACGTTACTGGCGGTTGCCCGGATCTGGCGCGAGCGATTACCTTTGCTCATTCAGCCGGGAtggg                      >  1:7502551/1‑92 (MQ=255)

                                                                   gcGGATTCTGGCGTTGGGTCAGACGTCGAACGTTACTGGCGGTTGCCCGGATCTGGCGCGAGCGATTACCTTTGCTCATTCAGCCGGGAtggt                      <  1:3277489/92‑1 (MQ=255)

                                                                    cGGATTCTGGCGTTGGGTCAGACGTCGAACGTTACTGGCGGTTGCCCGGATCTGGCGCGAGCGATTACCTTTGCTCATTCAGCCGGGAtggtg                     <  1:1040341/93‑1 (MQ=255)

                                                                     ggATTCTGGCGTTGGGTCAGACGTCGAACGTTACTGGCGGTTGCCCGGATCTGGCGCGAGCGATTACCTTTGCTCATTCAGCCGGGAtggtgg                    >  1:6168579/1‑93 (MQ=255)

                                                                      gATTCTGGCGTTGGGTCAGACGTCGAACGTTACTGGCGGTTGCCCGGATCTGGCGCGAGCGATTACCTTTGCTCATTCAGCCGGGAtggtggg                   >  1:1191381/1‑92 (MQ=255)

                                                                        ttCTGGCGTTGGGTCAGACGTCGAACGTTACTGGCGGTTGCCCGGATCTGGCGCGAGCGATTACCTTTGCTCATTCAGCCGGGATGGTGGtga                 <  1:278412/93‑1 (MQ=255)

                                                                        ttCTGGCGTTGGGTCAGACGTCGAACGTTACTGGCGGTTGCCCGGATCTGGCGCGAGCGATTACCTTTGCTCATTCAGCCGGGATGGTGGtga                 >  1:5926346/1‑93 (MQ=255)

                                                                         tCTGGCGTTGGGTCAGACGTCGAACGTTACTGGCGGTTGCCCGGATCTGGCGCGAGCGATTACCTTTGCTCATTCCGCCGGGGTGGTGGtgat                >  2:3729264/1‑93 (MQ=255)

                                                                         tCTGGCGTTGGGTCAGACGTCGAACGTTACTGGCGGTTGCCCGGATCTGGCGCGAGCGATTACCTTTGCTCATTCAGCCGGGATGGTGGtgat                <  2:2081313/93‑1 (MQ=255)

                                                                          cTGGCGTTGGGTCAGACGTCGAACGTTACTGGCGGTTGCCCGGATCTGGCGCGAGCGATTACCTTTGCTCATTCAGCCGGGATGGTGGtgatg               <  1:7146009/93‑1 (MQ=255)

                                                                               gTTGGGTCAGACGTCGAACGTTACTGGCGGTTGCCCGGATCTGGCGCGAGCGATTACCTTTGCTCCTTCAGCCGGGATGGTGGtgatggttgg          >  2:2891798/1‑92 (MQ=255)

                                                                               gTTGGGTCAGACGTCGAACGTTACTGGCGGTTGCCCGGATCTGGCGCGAGCGATTACCTTTGCTCATTCAGCCGGGATGGTGGtgatggttgg          >  2:3075768/1‑92 (MQ=255)

                                                                               gTTGGGTCAGACGTCGAACGTTACTGGCGGTTGCCCGGATCTGGCGCGAGCGATTACCTTTGCTCATTCAGCCGGGATGGTGGtgatggttga          <  2:6520334/93‑1 (MQ=255)

                                                                               gTTGGGTCAGACGTCGAACGTTACTGGCGGTTGCCCGGATCTGGCGCGAGCGATTACCTTTGCTCATTCAGCCGGGATGGTGGggatggttga          >  1:2253305/1‑93 (MQ=255)

                                                                                ttGGGTCAGACGTCGAACGTTACTGGCGGTTGCCCGGATCTGGCGCGAGCGATTACCTTTGCTCATTCAGCCGGGATGGTGGtgatggttgat         <  2:6192742/93‑1 (MQ=255)

                                                                                 tGGGTCAGACGTCGAACGTTACTGGCGGTTGCCCGGATCTGGCGCGAGCGATTACCTTTGCTCATTCAGCCGGGATGGTGGtgatggttgatg        <  1:1486804/93‑1 (MQ=255)

                                                                                  gggTCAGACGTCGAACGTTACTGGCGGTTGCCCGGATCTGGCGCGAGCGATTACCTTTGCTCATTCAGCCGGGATGGTGGtgatggttgatgg       <  2:5609965/93‑1 (MQ=255)

                                                                                   ggTCAGACGTCGAACGTTACTGGCGGTTGCCCGGATCTGGCGCGAGCGATTACCTTTGCTCATTCAGCCGGGATGGTGGtgatggttgatggt      <  1:4182429/93‑1 (MQ=255)

                                                                                    gTCAGACGTCGAACGTTACTGGCGGTTGCCCGGATCTGGCGCGAGCGATTACCTTTGCTCATTCAGCCGGGATGGTGGTGATGGTTGATGGTg     >  1:7267164/1‑93 (MQ=255)

                                                                                       aGACGTCGAACGTTACTGGCGGTTGCCCGGATCTGGCGCGAGCGATTACCTTTGCTCATTCAGCCGGGATGGTGGTGATGGTTGATGGTGCTc  >  2:6547339/1‑93 (MQ=255)

                                                                                       aGACGTCGAACGTTACTGGCGGTTGCCCGGATCTGGCGCGAGCGATTACCTTTGCTCATTCAGCCGGGATGGTGGTGATGGTTGATGGTGCTc  <  1:5222505/93‑1 (MQ=255)

                                                                                       aGACGTCGAACGTTACTGGCGGTTGCCCGGATCTGGCGCGAGCGATTACCTTTGCTCATTCAGCCGGGATGGTGGTGATGGTTGATGGTGCTc  <  1:4955024/93‑1 (MQ=255)

AATTGCCGCTTAATGCGCAGCGACTGCCGGATGTCGATTTGTTGCCAGAACTGATTACTCCCCGTAGTCGGATTCTGGCGTTGGGTCAGATGTCGAACGTTACTGGCGGTTGCCCGGATCTGGCGCGAGCGATTACCTTTGCTCATTCAGCCGGGATGGTGGTGATGGTTGATGGTGCTC  >  NC_000913/2941774‑2941953

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 19 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`

GATK/CNVnator alignment

BRESEQ :: bam2aln output

TGAAATTGCCGCTTAATGCGCAGCGACTGCCGGATGTCGATTTGTTGCCAGAACTGATTACTCCCCGTAGTCGGATTCTGGCGTTGGGTCAGATGTCGAACGTTACTGGCGGTTGCCCGGATCTGGCGCGAGCGATTACCTTTGCTCATTCAGCCGGGATGGTGGTGATGGTTGATGGTGCTCAGGG  >  NC_000913/2941771‑2941957

TGAAATTGCCGCTTAATGCGCAGCGACTGCCGGATGTCGATTTGTTGCCAGAACTGATTACTCCCCGTAGTCGGATTCTGGCGTTGGGTCAGAC                                                                                               >  SRR4302543.2544597/1‑94 (MQ=60)

TGAAATTGCCGCTTAATGCGCAGCGACTGCCGGATGTCGATTTGTTGCCAGAACTGATTACTCCCCGTAGTCGGATTCTGGCGTTGGGTCAGAC                                                                                               <  SRR4302543.1203970/94‑1 (MQ=60)

TGAAATTGCCGCTTAATGCGCAGCGACTGCCGGATGTCGATTTGTTGCCAGAACTGATTACTCCCCGTAGTCGGATTCTGGCGTTGGGTCAGAC                                                                                               >  SRR4302543.1589503/1‑94 (MQ=60)

 GAAATTGCCGCTTAATGCGCAGCGACTGCCGGATGTCGATTTGTTGCCAGAACTGATTACTCCCCGTAGTCGGATTCTGGCGTTGGGTCAGACG                                                                                              <  SRR4302543.3191195/94‑1 (MQ=60)

  AAATTGCCGCTTAATGCGCAGCGACTGCCGGATGTCGATTTGTTGCCAGAACTGATTACTCCCCGTAGTCGGATTCTGGCGTTGGGTCAGACGT                                                                                             <  SRR4302543.6377158/94‑1 (MQ=60)

  AAATTGCCGCTTAATGCGCAGCGACTGCCGGATGTCGATTTGTTGCCAGAACTGATTACTCCCCGTAGTCGGATTCTGGCGTTGGGTCAGACGT                                                                                             <  SRR4302543.3634205/94‑1 (MQ=60)

  AAATTGCCGCTTAATGCGCAGCGACTGCCGGATGTCGATTTGTTGCCAGAACTGATTACTCCCCGTAGTCGGATTCTGGCGTTGGGTCAGACGT                                                                                             >  SRR4302543.1817360/1‑94 (MQ=60)

   AATTGCCGCTTAATGCGCAGCGACTGCCGGATGTCGATTTGTTGCCAGAACTGATTACTCCCCGTAGTCGGATTCTGGCGTTGGGTCAGACGTC                                                                                            <  SRR4302543.4594759/94‑1 (MQ=60)

   AATTGCCGCTTAATGCGCAGCGACTGCCGGATGTCGATTTGTTGCCAGAACTGATTACTCCCCGTAGTCGGATTCTGGCGTTGGGTCAGACGTC                                                                                            >  SRR4302543.3771823/1‑94 (MQ=60)

   AATTGCCGCTTAATGCGCAGCGACTGCCGGATGTCGATTTGTTGCCAGAACTGATTACTCCCCGTAGTCGGATTCTGGCGTTGGGTCAGACGTC                                                                                            <  SRR4302543.1500211/94‑1 (MQ=60)

   AATTGCAGCTTAATGCGCAGCGACTGCCGGATGTCGATTTGTTGCCAGAACTGATTACTCCCCGTAGTCGGATTCTGGCGTTGGGTCAGACGTC                                                                                            <  SRR4302543.2050918/94‑1 (MQ=60)

    ATTGCCGCTTAATGCGCAGCGACTGCCGGATGTCGATTTGTTGCCAGAACTGATTACTCCCCGTAGTCGGATTCTGGCGTTGGGTCAGACGTCG                                                                                           >  SRR4302543.3586598/1‑94 (MQ=60)

     TTGCCGCTTAATGCGCAGCGACTGCCGGATGTCGATTTGTTGCCAGAACTGATTACTCCCCGTAGTCGGATTCTGGCGTTGGGTCAGACGTCGA                                                                                          >  SRR4302543.3540444/1‑94 (MQ=60)

      TGCCGCTTAATGCGCAGCGACTGCCGGATGTCGATTTGTTGCCAGAACTGATTACTCCCCGTAGTCGGATTCTGGCGTTGGGTCAGACGTCGAA                                                                                         <  SRR4302543.281379/94‑1 (MQ=60)

      TGCCGCTTAATGCGCAGCGACTGCCGGATGTCGATTTGTTGCCAGAACTGATTACTCCCCGTAGTCGGATTCTGGCGTTGGGTCAGACGTCGAA                                                                                         <  SRR4302543.3479747/94‑1 (MQ=60)

       GCCGCTTAATGCGCAGCGACTGCCGGATGTCGATTTGTTGCCAGAACTGATTACTCCCCGTAGTCGGATTCTGGCGTTGGGTCAGACGTCGAAC                                                                                        <  SRR4302543.2615994/94‑1 (MQ=60)

        CCGCTTAATGCGCAGCGACTGCCGGATGTCGATTTGTTGCCAGAACTGATTACTCCCCGTAGTCGGATTCTGGCGTTGGGTCCGACGTCGAACG                                                                                       >  SRR4302543.2677703/1‑94 (MQ=60)

        CCGCTTAATGCGCAGCGACTGCCGGATGTCGATTTGTTGCCAGAACTGATTACTCCCCGTAGTCGGATTCTGGCGTTGGGTCAGACGTCGAACG                                                                                       <  SRR4302543.1296412/94‑1 (MQ=60)

        CCGCTTAATGCGCAGCGACTGCCGGATGTCGATTTGTTGCCAGAACTGATTACTCCCCGTAGTCGGATTCTGGCGTTGGGTCAGACGTCGAACG                                                                                       >  SRR4302543.4785725/1‑94 (MQ=60)

        CCGCTTAATGCGCAGCGACTGCCGGATGTCGATTTGTTGCCAGAACTGATTACTCCCCGTAGTCGGATTCTGGCGTTGGGTCAGACGTCGAACG                                                                                       >  SRR4302543.6433879/1‑94 (MQ=60)

         CGCTTAATGCGCAGCGACTGCCGGATGTCGATTTGTTGCCAGAACTGATTACTCCCCGTAGTCGGATTCTGGCGTTGGGTCAGACGTCGAACGT                                                                                      <  SRR4302543.2520156/94‑1 (MQ=60)

         CGCTTAATGCGCAGCGACTGCCGGATGTCGATTTGTTGCCAGAACTGATTACTCCCCGTAGTCGGATTCTGGCGTTGGGTCAGACGTCGAACGT                                                                                      >  SRR4302543.582203/1‑94 (MQ=60)

         CGCTTAATGCGCAGCGACTGCCGGATGTCGATTTGTTGCCAGAACTGATTACTCCCCGTAGTCGGATTCTGGCGTTGGGTCAGACGTCGAACGT                                                                                      >  SRR4302543.1250812/1‑94 (MQ=60)

           CTTAATGCGCAGCGACTGCCGGATGTCGATTTGTTGCCAGAACTGATTACTCCCCGTAGTCGGATTCTGGCGTTGGGTCAGACGTCGAACGTTA                                                                                    >  SRR4302543.7320240/1‑94 (MQ=60)

           CTTAATGCGCAGCGACTGCCGGATGTCGATTTGTTGCCAGAACTGATTACTCCCCGTAGTCGGATTCTGGCGTTGGGTCAGACGTCGAACGTTA                                                                                    >  SRR4302543.5177978/1‑94 (MQ=60)

            TTAATGCGCAGCGACTGCCGGATGTCGATTTGTTGCCAGAACTGATTACTCCCCGTAGTCGGATTCTGGCGTTGGGTCAGACGTCGAACGTTAC                                                                                   <  SRR4302543.6695175/94‑1 (MQ=60)

             TAATGCGCAGCGACTGCCGGATGTCGATTTGTTGCCAGAACTGATTACTCCCCGTAGTCGGATTCTGGCGTTGGGTCAGACGTCGAACGTTACT                                                                                  <  SRR4302543.6927882/94‑1 (MQ=60)

             TAATGCGCAGCGACTGCCGGATGTCGATTTGTTGCCAGAACTGATTACTCCCCGTAGTCGGATTCTGGCGTTGGGTCAGACGTCGAACGTTACT                                                                                  >  SRR4302543.6610573/1‑94 (MQ=60)

               ATGCGCAGCGACTGCCGGATGTCGATTTGTTGCCAGAACTGATTACTCCCCGTAGTCGGATTCTGGCGTTGGGTCAGACGTCGAACGTTACTGG                                                                                >  SRR4302543.1798255/1‑94 (MQ=60)

               ATGCGCAGCGACTGCCGGATGTCGATTTGTTGCCAGAACTGATTACTCCCCGTAGTCGGATTCTGGCGTTGGGTCAGACGTCGAACGTTACTGG                                                                                >  SRR4302543.6543942/1‑94 (MQ=60)

               ATGCGCAGCGACTGCCGGATGTCGATTTGTTGCCAGAACTGATTACTCCCCGTAGTCGGATTCTGGCGTTGGGTCAGACGTCGAACGTTACTGG                                                                                <  SRR4302543.5240263/94‑1 (MQ=60)

                 GCGCAGCGACTGCCGGATGTCGATTTGTTGCCAGAACTGATTACTCCCCGTAGTCGGATTCTGGCGTTGGGTCAGACGTCGAACGTTACTGGCG                                                                              <  SRR4302543.3880447/94‑1 (MQ=60)

                 GCGCAGCGACTGCCGGATGTCGATTTGTTGCCAGAACTGATTACTCCCCGTAGTCGGATTCTGGCGTTGGGTCAGACGTCGAACGTTACTGGCG                                                                              <  SRR4302543.831389/94‑1 (MQ=60)

                  CGCAGCGACTGCCGGATGTCGATTTGTTGCCAGAACTGATTACTCCCCGTAGTCGGATTCTGGCGTTGGGTCAGACGTCGAACGTTACTGGCGG                                                                             >  SRR4302543.922708/1‑94 (MQ=60)

                   GCAGCGACTGCCGGATGTCGATTTGTTGCCAGAACTGATTACTCCCCGTAGTCGGATTCTGGCGTTGGGTCAGACGTCGAACGTTACTGGCGGT                                                                            >  SRR4302543.3109660/1‑94 (MQ=60)

                    CAGCGACTGCCGGATGTCGTTTTGTTGCCAGAACTGATTACTCCCCGTAGTCGGATTCTTGCGTTGGGCCAGACGTCAAACGTTAacgggggtt                                                                           >  SRR4302543.1972928/1‑85 (MQ=60)

                    CAGCGACTGCCGGATGTCGATTTGTTGCCAGAACTGATTACTCCCCGTAGTCGGATTCTGGCGTTGGGTCAGACGTCGAACGTTACTGGCGGTT                                                                           <  SRR4302543.114758/94‑1 (MQ=60)

                    CAGCGACTGCCGGATGTCGATTTGTTGCCAGAACTGATTACTCCCCGTAGTCGGATTCTGGCGTTGGGTCAGACGTCGAACGTTACTGGCGGGT                                                                           >  SRR4302543.2142097/1‑94 (MQ=60)

                    CAGCGACTGCCGGATGTCGATTTGTTGCCAGAACTGATTACTCCCCGTAGTCGGATTCTGGCGTTGGGTCAGACGCCGAACGTTACTGGCGGTT                                                                           >  SRR4302543.5866779/1‑94 (MQ=60)

                     AGCGACTGCCGGATGTCGATTTGTTGCCAGAACTGATTACTCCCCGTAGTCGGATTCTGGCGTTGGGTCAGACGTCGAACGTTACTGGCGGTTG                                                                          <  SRR4302543.5396746/94‑1 (MQ=60)

                     AGCGACTGCCGGATGTCGATTTGTTGCCAGAACTGATTACTCCCCGTAGTCGGATTCTGGCGTTGGGTCAGACGTCGAACGTTACTGGCGGTTG                                                                          >  SRR4302543.1228717/1‑94 (MQ=60)

                      GCGACTGCCGGATGTCGATTTGTTGCCAGAACTGATTACTCCCCGTAGTCGGATTCTGGCGTTGGGTCAGACGTCGAACGTTACTGGCGGTTGC                                                                         >  SRR4302543.3381048/1‑94 (MQ=60)

                       CGACTGCCGGATGTCGATTTGTTGCCAGAACTGATTACTCCCCGTAGTCGGATTCTGGCGTTGGGTCAGACGTCGAACGTTACTGGCGGTTGGC                                                                        >  SRR4302543.3957951/1‑94 (MQ=60)

                       CGACTGCCGGATGTCGATTTGTTGCCAGAACTGATTACTCCCCGTAGTCGGATTCTGGCGTTGGGTCAGACGTCGAACGTTACTGGCGGTTGCC                                                                        >  SRR4302543.4764364/1‑94 (MQ=60)

                       CGACTGCCGGATGTCGATTTGTTGCCAGAACTGATTACTCCCCGTAGTCGGATTCTGGCGTTGGGTCAGACGTCGAACGTTACTGGCGGTTGCC                                                                        >  SRR4302543.4185197/1‑94 (MQ=60)

                       CGACTGCCGGATGTCGATTTGTTGCCAGAACTGATTACTCCCCGTAGTCGGATTCTGGCGTTGGGTCAGACGTCGAACGTTACTGGCGGTTGCC                                                                        >  SRR4302543.6961933/1‑94 (MQ=60)

                       CGACTGCCGGATGTCGATTTGTTGCCAGAACTGATTACTCCCCGTAGTCGGATTCTGGCGTTGGGTCAGACGTCGAACGTTACTGGCGGTTGCC                                                                        >  SRR4302543.6492330/1‑94 (MQ=60)

                       CGACTGCCGGATGTCGATTTGTTGCCAGAACTGATTACTCCCCGTAGTCGGATTCTGGCGTTGGGTCAGACGTCGAACGTTACTGGCGGTTGCC                                                                        <  SRR4302543.3913367/94‑1 (MQ=60)

                       CGACTGCCGGATGTCGATTTGTTGCCAGAACTGATTACTCCCCGTAGTCGGATTCTGGCGTTGGGTCAGACGTCGAACGTTACTGGCGGGTGCC                                                                        >  SRR4302543.503693/1‑94 (MQ=60)

                        GACTGCCGGATGTCGATTTGTTGCCAGAACTGATTACTCCCCGTAGTCGGATTCTGGCGTTGGGTCAGACGTCGAACGTTACTGGCGGTTGCCC                                                                       >  SRR4302543.5145256/1‑94 (MQ=60)

                         ACTGCCGGATGTCGATTTGTTGCCAGAACTGATTACTCCCCGTAGTCGGATTCTGGCGTTGGGTCAGACGTCGAACGTTACTGGCGGTTGGCCG                                                                      >  SRR4302543.3335760/1‑94 (MQ=60)

                         ACTGCCGGATGTCGATTTGTTGCCAGAACTGATTACTCCCCGTAGTCGGATTCTGGCGTTGGGTCAGACGTCGAACGTTACTGGCGGTTGCCCG                                                                      <  SRR4302543.2586497/94‑1 (MQ=60)

                          CTGCCGGATGTCGATTTGTTGCCAGAACTGATTACTCCCCGTAGTCGGATTCTGGCGTTGGGTCAGACGTCGAACGTTACTGGCGGTTGCCCGG                                                                     <  SRR4302543.7463087/94‑1 (MQ=60)

                          CTGCCGGATGTCGATTTGTTGCCAGAACTGATTACTCCCCGTAGTCGGATTCTGGCGTTGGGTCAGACGTCGAACGTTACTGGCGGTTGCCCGG                                                                     <  SRR4302543.6130215/94‑1 (MQ=60)

                           TGCCGGATGTCGATTTGTTGCCAGAACTGATTACTCCCCGTAGTCGGATTCTGGCGTTGGGTCAGACGTCGAACGTTACTGGCGGTTGCCCGGA                                                                    >  SRR4302543.2640660/1‑94 (MQ=60)

                            GCCGGATGTCGATTTGTTGCCAGAACTGATTACTCCCCGTAGTCGGATTCTGGCGTTGGGTCAGATGTCGAACGTTACTGGCGGTTGCCCGGAT                                                                   <  SRR4302543.3715884/94‑1 (MQ=60)

                            GCCGGATGTCGATTTGTTGCCAGAACTGATTACTCCCCGTAGTCGGATTCTGGCGTTGGGTCAGACGTCGAACGTTACTGGCGGTTGCCCGGAT                                                                   <  SRR4302543.403201/94‑1 (MQ=60)

                            GCCGGATGTCGATTTGTTGCCAGAACTGATTACTCCCCGTAGTCGGATTCTGGCGTTGGGTCAGACGTCGAACGTTACTGGCGGTTGCCCGGAT                                                                   >  SRR4302543.3762156/1‑94 (MQ=60)

                            GCCGGATGTCGATTTGTTGCCAGAACTGATTACTCCCCGTAGTCGGATTCTGGCGTTGGGTCAGACGTCGAACGTTACTGGCGGTTGCCCGGAT                                                                   >  SRR4302543.2064756/1‑94 (MQ=60)

                             CCGGATGTCGATTTGTTGCCAGAACTGATTACTCCCCGTAGTCGGATTCTGGCGTTGGGTCAGACGTCGAACGTTACTGGCGGTTGCCCGGATC                                                                  <  SRR4302543.6315978/94‑1 (MQ=60)

                             CCGGATGTCGATTTGTTGCCAGAACTGATTACTCCCCGTAGTCGGATTCTGGCGTTGGGTCAGACGTCGAACGTTACTGGCGGTTGCCCGGATC                                                                  <  SRR4302543.6979661/94‑1 (MQ=60)

                              CGGATGTCGATTTGTTGCCAGAACTGATTTCTCCCCGTAGTCGGATTCTGGCGTTGGGTCAGACGTCGAACGTTACTGGCGGTTGCCCGGATCT                                                                 <  SRR4302543.2468288/94‑1 (MQ=60)

                              CGGATGTCGATTTGTTGCCAGAACTGATTACTCCCCGTAGTCGGATTCTGGCGTTGGGTCAGACGTCGAACGTTACTGGCGGTTGCCCGGATCT                                                                 <  SRR4302543.6070509/94‑1 (MQ=60)

                              CGGATGTCGATTTGTTGCCAGAACTGATTACTCCCCGTAGTCGGATTCTGGCGTTGGGTCAGACGTCGAACGTTACTGGCGGTTGCCCGGATCT                                                                 >  SRR4302543.2020216/1‑94 (MQ=60)

                               GGATGTCGATTTGTTGCCAGAACTGATTACTCCCCGTAGTCGGATTCTGGCGTTGGGTCAGACGTCGAACGTTACTGGCGGTTGCCCGGATCTG                                                                >  SRR4302543.6372576/1‑94 (MQ=60)

                               GGATGTCGATTTGTTGCCAGAACTGATTACTCCCCGTAGTCGGATTCTGGCGTTGGGTCAGACGTCGAACGTTACTGGCGGTTGCCCGGATCTG                                                                >  SRR4302543.2027619/1‑94 (MQ=60)

                                GATGTCGATTTGTTGCGAGAACTGATTACTCCCCGTAGTCGGATTCTGGCGTTGGGTCAGACGTCGAACGTTACTGGCGGTTGCCCGGATCTGG                                                               <  SRR4302543.1968495/94‑1 (MQ=60)

                                GATGTCGATTTGTTGCCAGAACTGATTACTCCCCGTAGTCGGATTCTGGCGTTGGGTCAGACGTCGAACGTTACTGGCGGTTGCCCGGATCTGG                                                               <  SRR4302543.2933396/94‑1 (MQ=60)

                                GATGTCGATTTGTTGCCAGAACTGATTACTCCCCGTAGTCGGATTCTGGCGTTGGGTCAGACGTCGAACGTTACTGGCGGTTGCCCGGATCTGG                                                               >  SRR4302543.4152863/1‑94 (MQ=60)

                                 ATGTCGATTTGTTGCCAGAACTGATTACTCCCCGTAGTCGGATTCTGGCGTTGGGTCAGACGTCGAACGTTACTGGCGGTTGCCCGGATCTGGC                                                              >  SRR4302543.2088818/1‑94 (MQ=60)

                                  TGTCGATTTGTTGCCAGAACTGATTACTCCCCGTAGTCGGATTCTGGCGTTGGGTCAGACGTCGAACGTTACTGGCGGTTGCCCGGATCTGGCG                                                             <  SRR4302543.5270164/94‑1 (MQ=60)

                                      GATTTGTTGCCAGAACTTATTACTCCCCGTAGTCGGATTCTGGCGTTGGGTCAGACGTCGAACGTTACTGGCGGTTGCCCGGATCTGGCGCGAG                                                         <  SRR4302543.5324841/94‑1 (MQ=60)

                                      GATTTGTTGCCAGAACTGATTACTCCCCGTAGTCGGATTCTGGCGTTGGGTCAGACGTCGAACGTTACTGGCGGTTGCCCGGATCTGGCGCGAG                                                         <  SRR4302543.6806779/94‑1 (MQ=60)

                                      GATTTGTTGCCAGAACTGATTACTCCCCGTAGTCGGATTCTGGCGTTGGGTCAGACGTCGAACGTTACTGGCGGTTGCCCGGATCTGGCGCGAG                                                         <  SRR4302543.2511252/94‑1 (MQ=60)

                                      GATTTGTTGCCAGAACTGATTACTCCCCGTAGTCGGATTCTGGCGTTGGGTCAGACGTCGAACGTTACTGGCGGTTGCCCGGATCTGGCGCGAG                                                         >  SRR4302543.2250785/1‑94 (MQ=60)

                                       ATTTGTTGCCAGAACTGATTACTCCCCGTAGTCGGATTCTGGCGTTGGGTCAGACGTCGAACGTTACTGGCGGTTGCCCGGATCTGGCGGGAGC                                                        >  SRR4302543.1719981/1‑94 (MQ=60)

                                       ATTTGTTGCCAGAACTGATTACTCCCCGTAGTCGGATTCTGGCGTTGGGTCAGACGTCGAACGTTACTGGCGGTTGCCCGGATCTGGCGCGAGC                                                        <  SRR4302543.2148165/94‑1 (MQ=60)

                                        TTTGTTGCCAGAACTGATCACTCCCCGTAGTCGGATTCTGGCGTTGGGTCAGACGTCGAACGTTACTGGCGGTTGCCCGGATCTGGCGCGAGCG                                                       <  SRR4302543.6490834/94‑1 (MQ=60)

                                          TGTTGCCAGAACTGATTACTCCCCGTAGTCGGATTCTGGCGTTGGGTCAGACGTCGAACGTTACTGGCGGTTGCCCGGATCTGGCGCGAGCGAT                                                     <  SRR4302543.6123302/94‑1 (MQ=60)

                                          TGTTGCCAGAACTGATTACTCCCCGTAGTCGGATTCTGGCGTTGGGTCAGACGTCGAACGTTACTGGCGGTTGCCCGGATCTGGCGCGAGCGAT                                                     >  SRR4302543.4135445/1‑94 (MQ=60)

                                           GTTGCCAGAACTGATTACTCCCCGTAGTCGGATTCTGGCGTTGGGTCAGACGTCGAACGTTACTGGCGGTTGCCCGGATCTGGCGCGAGCGATT                                                    >  SRR4302543.3323669/1‑94 (MQ=60)

                                           GTTGCCAGAACTGATTACTCCCCGTAGTCGGATTCTGGCGTTGGGTCAGACGTCGAACGTTACTGGCGGTTGCCCGGATCTGGCGCGAGCGATT                                                    <  SRR4302543.1774265/94‑1 (MQ=60)

                                           GTTGCCAGAACTGATTACTCCCCGTAGTCGGATTCTGGCGTTGGGTCAGACGTCGAACGTTACTGGCGGTTGCCCGGATCTGGCGCGAGCGATT                                                    >  SRR4302543.646873/1‑94 (MQ=60)

                                            TTGCCAGAACTGATTACTCCCCGTAGTCGGATTCTGGCGTTGGGTCAGACGTCGAACGTTACTGGCGGTTGCCCGGATCTGGCGCGAGCGATTA                                                   <  SRR4302543.1248705/94‑1 (MQ=60)

                                            TTGCCAGAACTGATTACTCCCCGTAGTCGGATTCTGGCGTTGGGTCAGACGTCGAACGTTACTGGCGGTTGCCCGGATCTGGCGCGAGCGATTA                                                   <  SRR4302543.5308317/94‑1 (MQ=60)

                                            TTGCCAGAACTGATTACTCCCCGTAGTCGGATTCTGGCGTTGGGTCAGACGTCGAACGTTACTGGCGGTTGCCCGGATCTGGCGCGAGCGATTA                                                   <  SRR4302543.7667762/94‑1 (MQ=60)

                                             TGCCAGAACTGATTACTCCCCGTAGTCGGATTCTGGCGTTGGGTCAGACGTCGAACGTTACTGGCGGTTGCCCGGGTCTGGCGCGAGCGATTAC                                                  >  SRR4302543.5873503/1‑94 (MQ=60)

                                              GCCAGAACTGATTACTCCCCGTAGTCGGATTCTGGCGTTGGGTCAGACGTCGAACGTTACTGGCGGTTGCCCGGATCTGGCGCGAGCGATTACC                                                 <  SRR4302543.7474137/94‑1 (MQ=60)

                                               CCAGAGCTGATTACTCCCCGTAGTCGGATTCTGGCGTTGGGTCAGACGTCGAACGTTACTGGCGGTTGCCCGGATCTGGCGCGAGCGATTACCT                                                >  SRR4302543.1644934/1‑94 (MQ=60)

                                               CCAGAACTGATTACTCCCCGTAGTCGGATTCTGGCGTTGGGTCAGACGTCGAACGTTACTGGCGGTTGTCCGGATCTGGCGCGAGCGATTACCT                                                >  SRR4302543.7551740/1‑94 (MQ=60)

                                                CAGAACTGATTACTCCCCGTAGTCGGATTCTGGCGTTGGGTCAGACGTCGAACGTTACTGGCGGTTGCCCGGTTCTGGCGGGAGCGATTACCTT                                               >  SRR4302543.2624104/1‑94 (MQ=60)

                                                CAGAACTGATTACTCCCCGTAGTCGGATTCTGGCGTTGGGTCAGACGTCGAACGTTACTGGCGGTTGCCCGGATCTGGCGCGAGCGATTACCTT                                               >  SRR4302543.2624105/1‑94 (MQ=60)

                                                CAGAACTGATTACTCCCCGTAGTCGGATTCTGGCGTTGGGTCAGACGTCGAACGTTACTGGCGGTTGCCCGGATCTGGCGCGAGCGATTACCTT                                               <  SRR4302543.1298113/94‑1 (MQ=60)

                                                 AGAACTGATTACTCCCCGTAGTCGGATTCTGGCGTTGGGTCAGACGTCGAACGTTACTGGCGGTTGCCCGGATCTGGCGCGAGCGATTACCTTT                                              <  SRR4302543.4159382/94‑1 (MQ=60)

                                                 AGAACTGATTACTCCCCGTAGTCGGATTCTGGCGTTGGGTCAGACGTCGAACGTTACTGGCGGTTGCCCGGATCTGGCGCGAGCGATTACCTTT                                              <  SRR4302543.4372507/94‑1 (MQ=60)

                                                 AGAACTGATTACTCCCCGTAGTCGGATTCTGGCGTTGGGTCAGACGTCGAACGTTACTGGCGGTTGCCCGGATCTGGCGCGAGCGATTACCTTT                                              >  SRR4302543.1674048/1‑94 (MQ=60)

                                                 AGAACTGATTACTCCCCGTAGTCGGATTCTGGCGTTGGGTCAGACGTCGAACGTTACTGGCGGTTGCCCGGATCTGGCGCGAGCGATTACCTTT                                              >  SRR4302543.3277348/1‑94 (MQ=60)

                                                  GAACTGATTGCTCCCCGTAGTCGGATTCTGGCGTTGGGTCAGACGTCGAACGTTACTGGCGGTTGCCCGGATCTGGCGCGAGCGATTACCTTTG                                             <  SRR4302543.7428226/94‑1 (MQ=60)

                                                  GAACTGATTACTCCCCGTAGTCGGATTCTGGCGTTGGGTCAGACGTCGAACGTTACTGGCGGTTGCCCGGATCTGGCGCGAGCGATTACCTTTG                                             >  SRR4302543.5506493/1‑94 (MQ=60)

                                                    ACTGATTACTCCCCGTAGTCGGATTCTGGCGTTGGGTCAGACGTCGAACGTTACTGGCGGTTGCCCGGATCTGGCGCGCGCGATTACCTTTGCT                                           >  SRR4302543.2572031/1‑94 (MQ=60)

                                                    ACTGATTACTCCCCGTAGTCGGATTCTGGCGTTGGGTCAGACGTCGAACGTTACTGGCGGTTGCCCGGATCTGGCGCGAGCGATTACCTTTGCT                                           <  SRR4302543.3140948/94‑1 (MQ=60)

                                                      TGATTACTCCCCGTAGTCGGATTCTGGCGTTGGGTCAGATGTCGAACGTTACTGGCGGTTGCCCGGATCTGGCGCGCGCGTTTACCTTTGCTCA                                         >  SRR4302543.6442105/1‑94 (MQ=60)

                                                      TGATTACTCCCCGTAGTCGGATTCTGGCGTTGGGTCAGACGTCGAACGTTACTGGCGGTTGCCCGGATCTGGCGCGAGCGATTACCTTTGCTCA                                         >  SRR4302543.2687021/1‑94 (MQ=60)

                                                      TGATTACTCCCCGTAGTCGGATTCTGGCGTTGGGTCAGACGTCGAACGTTACTGGCGGTTGCCCGGATCTGGCGCGAGCGATTACCTTTGCTCA                                         >  SRR4302543.7636573/1‑94 (MQ=60)

                                                       GATTACTCCCCGTAGTCGGATTCTGGCGTTGGGTCAGACGTCGAACGTTACTGGCGGTTGCCCGGGTCTGGCGCGAGCGATTACCCTTGCTCAT                                        >  SRR4302543.5088217/1‑94 (MQ=60)

                                                        ATTACTCCCCGTAGTCGGATTCTGGCGTTGGGTCAGACGTCGAACGTTACTGGCGGTTGCCCGGATCTGGCGCGAGCGATTACCTTTGCTCATT                                       <  SRR4302543.4293501/94‑1 (MQ=60)

                                                         TTACTCCCCGTAGTCGGATTCTGGCGTTGGGTCAGACGTCGAACGTTACTGGCGGTTGCCCGGATCTGGCGCGAGCGATTACCTTTGCTCATTC                                      <  SRR4302543.811216/94‑1 (MQ=60)

                                                         TTACTCCCCGTAGTCGGATTCTGGCGTTGGGTCAGACGTCGAACGTTACTGGCGGTTGCCCGGATCTGGCGCGAGCGATTACCTTTGCTCATTC                                      <  SRR4302543.4023443/94‑1 (MQ=60)

                                                         TTACTCCCCGTAGTCGGATTCTGGCGTTGGGTCAGACGTCGAACGTTACTGGCGGTTGCCCGGATCTGGCGCGAGCGATTACCTTTGCTCATTC                                      <  SRR4302543.2970477/94‑1 (MQ=60)

                                                          TCCTCCCCGTAGTCGGATTCTGGCGTTGGGTCAGACGTCGAACGTTACTGGCGGTTGCCCGGATCTGGCGCGAGCGATTACCTTTGCTCATTCA                                     <  SRR4302543.6206571/94‑1 (MQ=60)

                                                          TACTCCCCGTAGTCGGATTCTGGCGTTGGGTCAGACGTCGAACGTTACTGGCGGTTGCCCGGATCTGGCGCGAGCGATTACCTTTGCTCATTCA                                     >  SRR4302543.3616279/1‑94 (MQ=60)

                                                           ACTCCCCGTAGTCGGATTCTGGCGTTGGGTCAGACGTCGAACGTTACTGGCGGTTGCCCGGCTCTGGCGCGAGCGATTACCTTTGCTCATTCAC                                    >  SRR4302543.5092920/1‑94 (MQ=60)

                                                           ACTCCCCGTAGTCGGATTCTGGCGTTGGGTCAGACGTCGAACGTTACTGGCGGTTGCCCGGATCTGGCGCGAGCGATTACCTTTGCTCATTCAG                                    <  SRR4302543.3872667/94‑1 (MQ=60)

                                                            CTCCCCGTAGTCGGATTCTGGCGTTGGGTCAGACGTCGAACGTTACTGGCGGTTGCCCGGATCTGGCGCGAGCGATTACCTTTGCTCATTCAGC                                   >  SRR4302543.1414306/1‑94 (MQ=60)

                                                             TCCCCGTAGTCGGATTCTGGCGTTGGGTCAGACGTCGAACGTTACTGGCGGTTGCCCGGATCTGGCGCGAGCGATTACCTTTGCTCATTCAGCC                                  <  SRR4302543.1422239/94‑1 (MQ=60)

                                                             CCCCCGTAGTCGGATTCTGGCGTTGGGTCAGACGTCGAACGTTACTGGCGGTTGCCCGGATCTGGCGCGAGCGATTACCTTTGCTCATTCAGCC                                  <  SRR4302543.1753707/94‑1 (MQ=60)

                                                               CCCGTAGTCGGATTCTGGCGTTGGGTCAGACGTCGAACGTTACTGGCGGTTGCCCGGGTCTGGCGCGAGCGATTACCTTTGCTCATTCAGCCGG                                >  SRR4302543.3021674/1‑94 (MQ=60)

                                                               CCCGTAGTCGGATTCTGGCGTTGGGTCAGACGTCGAACGTTACTGGCGGTTGCCCGGATCTGGCGCGAGCGATTACCTTTGCTCATTCAGCCGG                                >  SRR4302543.5387865/1‑94 (MQ=60)

                                                                CCGTAGTCGGATTCTGGCGTTGGGTCAGACGTCGAACGTTACTGGCGGTTGCCCGGATCTGGCGCGAGCGATTACCTTTGCTCATTCAGCCGGG                               >  SRR4302543.2663314/1‑94 (MQ=60)

                                                                CCGTAGTCGGATTCTGGCGTTGGGTCAGACGTCGAACGTTACTGGCGGGTGCCCGGATCTGGCGCGAGCGATTACatttcctccttcatcccgg                               >  SRR4302543.5874077/1‑75 (MQ=60)

                                                                  GTAGTCGGATTCTGGCGTTGGGTCAGACGTCGAACGTTACTGGCGGTTGCCCGGATCTGGCGCGGGCGATTACCTTTGCTCATTCAGCCGGGAG                             >  SRR4302543.5647634/1‑94 (MQ=60)

                                                                  GTAGTCGGATTCTGGCGTTGGGTCAGACGTCGAACGTTACTGGCGGTTGCCCGGATCTGGCGCGAGCGATTACCTTTGCTCATTCAGCCGGGAT                             <  SRR4302543.4245205/94‑1 (MQ=60)

                                                                  GTAGTCGGATTCTGGCGTTGGGTCAGACGTCGAACGTTACTGGCGGTTGCCCGGATCTGGCGCGAGCGATTACCTTTGCTCATTCAGCCGGGAT                             <  SRR4302543.599032/94‑1 (MQ=60)

                                                                  GTAGTCGGATTCTGGCGTTGGGTCAGACGTCGAACGTTACTGGCGGTTGCCCGGATCTGGCGCGAGCGATTACCTTTGCTCATTCAGCCGGGAT                             >  SRR4302543.7829336/1‑94 (MQ=60)

                                                                   TAGTCGGATTCTGGCGTTGGGTCAGACGTCGAACGTTACTGGCGGTTGCCCGGATCTGGCGCGAGCGATTACCTTTGCTCATTCAGCCGGGATG                            >  SRR4302543.851648/1‑94 (MQ=60)

                                                                    AGTCGGATTCTGGCGTTGGGTCAGACGTCGAACGTTACTGGCGGTTGCCCGGATCTGGCGCGAGCGATTACCTTTGCTCATTCAGCCGGGGTGG                           >  SRR4302543.1573821/1‑94 (MQ=60)

                                                                    AGTCGGATTCTGGCGTTGGGTCAGACGTCGAACGTTACTGGCGGTTGCCCGGATCTGGCGCGAGCGATTACCTTTGCTCATTCAGCCGGGATGG                           >  SRR4302543.5446624/1‑94 (MQ=60)

                                                                    AGTCGGATTCTGGCGTTGGGTCAGACGTCGAACGTTACTGGCGGTTGCCCGGATCTGGCGCGAGCGATTACCTTTGCTCATTCAGCCGGGATGG                           >  SRR4302543.3385061/1‑94 (MQ=60)

                                                                     GTCGGATTCTGGCGTTGGGTCAGACGTCGAACGTTACTGGCGGTTGCCCGGATCTGGCGCGAGCGATTTCCTTTGCTCATTCAGCCGGGATGGT                          <  SRR4302543.2538137/94‑1 (MQ=60)

                                                                     GTCGGATTCTGGCGTTGGGTCAGACGTCGAACGTTACTGGCGGTTGCCCGGATCTGGCGCGAGCGATTACCTTTGCTCATTCAGCCGGGATGGT                          <  SRR4302543.7986478/94‑1 (MQ=60)

                                                                     GTCGGATTCTGGCGTTGGGTCAGACGTCGAACGTTACTGGCGGTTGCCCGGATCTGGCGCGAGCGATTACCTTTGCTCATTCAGCCGGGATGGG                          >  SRR4302543.2728323/1‑94 (MQ=60)

                                                                     GTCGGATTCTGGCGTTGGGTCAGACGTCGAACGTTACTGGCGGTTGCCCGGATCTGGCGCGAGCGATTACCTTTGCTCATTCAGCCGGGATGGG                          >  SRR4302543.7574281/1‑94 (MQ=60)

                                                                      GCGGATTCTGGCGTTGGGTCAGACGTCGAACGTTACTGGCGGTTGCCCGGATCTGGCGCGAGCGATTACCTTTGCTCATTCAGCCGGGATGGTG                         <  SRR4302543.3307085/94‑1 (MQ=60)

                                                                       CGGATTCTGGCGTTGGGTCAGACGTCGAACGTTACTGGCGGTTGCCCGGATCTGGCGCGAGCGATTACCTTTGCTCATTCAGCCGGGATGGTGG                        >  SRR4302543.6226940/1‑94 (MQ=60)

                                                                       CGGATTCTGGCGTTGGGTCAGACGTCGAACGTTACTGGCGGTTGCCCGGATCTGGCGCGAGCGATTACCTTTGCTCATTCAGCCGGGATGGTGG                        <  SRR4302543.1049607/94‑1 (MQ=60)

                                                                        GGATTCTGGCGTTGGGTCAGACGTCGAACGTTACTGGCGGTTGCCCGGCTCTGGCGCGAGCGATTACCTTTGCTCATTCAGCCGGGATGGTGGG                       >  SRR4302543.6460254/1‑94 (MQ=60)

                                                                        GGATTCTGGCGTTGGGTCAGACGTCGAACGTTACTGGCGGTTGCCCGGATCTGGCGCGAGCGATTACCTTTGCTCATTCAGCCGGGATGGgggg                       >  SRR4302543.2629813/1‑90 (MQ=60)

                                                                        GGATTCTGGCGTTGGGTCAGACGTCGAACGTTACTGGCGGTTGCCCGGATCTGGCGCGAGCGATTACCTTTGCTCATTCAGCCGGGATGGTGGG                       >  SRR4302543.1843107/1‑94 (MQ=60)

                                                                        GGATTCTGGCGTTGGGTCAGACGTCGAACGTTACTGGCGGTTGCCCGGATCTGGCGCGAGCGATTACCTTTGCTCATTCAGCCGGGATGGTGGG                       >  SRR4302543.1202124/1‑94 (MQ=60)

                                                                        GGATTCTGGCGTTGGGTCAGACGTCGAACGTTACTGGCGGTTGCCCGGATCTGGCGCGAGCGATTACCTTTGCTCATTCAGCCGGGATGGTGGG                       >  SRR4302543.7866107/1‑94 (MQ=60)

                                                                        GGATTCTGGCGTTGGGTCAGACGTCGAACGTTACTGGCGGTTGCCCGGATCTGGCGCGAGCGATTACCTTTGCTCATTCAGCCGGGATGGTGGG                       >  SRR4302543.1286379/1‑94 (MQ=60)

                                                                        GGATTCTGGCGTTGGGTCAGACGTCGAACGTTACTGGCGGTTGCCCGGATCTGGCGCGAGCGATTACCTTTGCTCATTCAGCCGGGATGGTGGG                       >  SRR4302543.7289735/1‑94 (MQ=60)

                                                                         GATTCTGGCGTTGGGTCAGACGTCGAACGTTACTGGCGGTTGCCCGGATCTGGCGCGAGCGATTACCTTTGCTCATTCAGCCGGGATGGTGGTG                      >  SRR4302543.4824397/1‑94 (MQ=60)

                                                                         GATTCTGGCGTTGGGTCAGACGTCGAACGTTACTGGCGGTTGCCCGGATCTGGCGCGAGCGATTACCTTTGCTCATTCAGCCCGGATGGTGGTG                      >  SRR4302543.5388904/1‑94 (MQ=60)

                                                                          ATTCTGGCGTTGGGTCAGACGTCGAACGTTACTGGCGGTTGCCCGGATCTGGCGCGAGCGATTACCTTTGCTCATTCAGCCGGGATGGTGGTGA                     >  SRR4302543.5980516/1‑94 (MQ=60)

                                                                           TTCTGGCGTTGGGTCAGACGTCGAACGTTACTGGCGGTTGCCCGGATCTGGCGCGAGCGATTACCTTTGCTCATTCAGCCGGGATGGTGGTGAT                    <  SRR4302543.280873/94‑1 (MQ=60)

                                                                            TCTGGCGTTGGGTCAGACGTCGAACGTTACTGGCGGTTGCCCTGATCTGGCGCGAGCGATTACCTTTGCTCATTCAGCCGGGATGGTGGTGATG                   <  SRR4302543.7875143/94‑1 (MQ=60)

                                                                            TCTGGCGTTGGGTCAGACGTCGAACGTTACTGGCGGTTGCCCGGATCTGGCGCGAGCGATTACCTTTGCTCATTCAGCCGGGATGGTGGTGATG                   <  SRR4302543.4291161/94‑1 (MQ=60)

                                                                             CTGGCGTTGGGTCAGACGTCGAACGTTACTGGCGGTTGCCCGGATCTGGCGCGAGCGATTACCTTTGCTCATTCAGCCGGGATGGTGGTGATGG                  <  SRR4302543.7053264/94‑1 (MQ=60)

                                                                             CTGGCGTTGGGTCAGACGTCGAACGTTACTGGCGGTTGCCCGGATCTGGCGCGAGCGATTACCTTTGCTCATTCAGCCGGGATGGTGGTGATGG                  <  SRR4302543.7215462/94‑1 (MQ=60)

                                                                             CTGGCGTTGGGTCAGACGTCGAACGTTACTGGCGGTTGCCCGGATCTGGCGCGAGCGATTACCTTTGCTCATTCAGCCGGGATGGTGGTGATGG                  >  SRR4302543.3467354/1‑94 (MQ=60)

                                                                               GGCGTTGGGTCAGACGTCGAACGTTACTGGCGGTTGCCCGGATCTGGCGCGAGCGATTACCTTTGCTCATTCAGCCGGGATGGTGGTGATGGTT                <  SRR4302543.2996441/94‑1 (MQ=60)

                                                                                 CGTTGGGTCAGACGTCGAACGTTACTGGCGGTTGCCCGGATCTGGCGCGAGCGATTACCTTTGCTCATTCAGCCGGGATGGTGGTGATGGGTGA              >  SRR4302543.3655072/1‑94 (MQ=60)

                                                                                 CGTTGGGTCAGACGTCGAACGTTACTGGCGGTTGCCCGGATCTGGCGCGAGCGATTACCTTTGCTCATTCAGCCGGGATGGTGGGGATGGTTGA              >  SRR4302543.2273794/1‑94 (MQ=60)

                                                                                  GTTGGGTCAGACGTCGAACGTTACTGGCGGTTGCCCGGATCTGGCGCGAGCGATTACCTTTGCTCATTCAGCCGGGATGGTGGTGATGGTTGAT             <  SRR4302543.4794896/94‑1 (MQ=60)

                                                                                  GTTGGGTCAGACGTCGAACGTTACTGGCGGTTGCCCGGATCTGGCGCGAGCGATTACCTTTGCTCATTCAGCCGGGATGGGGGTGATGGTTGAT             >  SRR4302543.715613/1‑94 (MQ=60)

                                                                                   TTGGGTCAGACGTCGAACGTTACTGGCGGTTGCCCGGATCTGGCGCGAGCGATTACCTTTGCTCATTCAGCCGGGATGGTGGTGATGGTTGATG            <  SRR4302543.473017/94‑1 (MQ=60)

                                                                                    TGGGTCAGACGTCGAACGTTACTGGCGGTTGCCCGGATCTGGCGCGAGCGATTACCTTTGCTCATTCAGCCGGGATGGTGGTGATGGTTGATGG           <  SRR4302543.1500180/94‑1 (MQ=60)

                                                                                      GGTCAGACGTCGAACGTTACTGGCGGTTGCCCGGATCTGGCGCGAGCGATTACCTTTGCTCATTCAGCCGGGATGGTGGTGATGGTTGATGGTG         >  SRR4302543.7337375/1‑94 (MQ=60)

                                                                                      GGTCAGACGTCGAACGTTACTGGCGGTTGCCCGGATCTGGCGCGAGCGATTACCTTTGCTCATTCAGCCGGGATGGTGGTGATGGTTGATGGTG         <  SRR4302543.4220329/94‑1 (MQ=60)

                                                                                       GTCAGACGTCGAACGTTACTGGCGGTTGCCCGGATCTGGCGCGAGCGATTACCTTTGCTCATTCAGCCGGGATGGTGGTGATGGTTGATGGTGC        <  SRR4302543.4414603/94‑1 (MQ=60)

                                                                                        TCAGACGTCGAACGTTACTGGCGGTTGCCCGGATCTGGCGCGAGCGATTACCTTTGCTCATTCAGCCGGGATGGTGGTGATGGTTGATGGTGCT       <  SRR4302543.2317190/94‑1 (MQ=60)

                                                                                        TCAGACGTCGAACGTTACTGGCGGTTGCCCGGATCTGGCGCGAGCGATTACCTTTGCTCATTCAGCCGGGATGGTGGTGATGGTTGATGGTGCT       <  SRR4302543.2688347/94‑1 (MQ=60)

                                                                                        GCAGACGTCGAACGTTACTGGCGGTTGCCCGGATCTGGCGCGAGCGATTACCTTTGCTCATTCAGCCGGGATGGTGGTGATGGTTGATGGTGCT       <  SRR4302543.5830425/94‑1 (MQ=60)

                                                                                          AGACGTCGAACGTTACTGGCGGTTGCCCGGATCTGGCGCGAGCGATTACCTTTGCTCATTCAGCCGGGATGGTGGTGATGGTTGATGGTGCTCA     >  SRR4302543.6723438/1‑94 (MQ=60)

                                                                                          AGACGTCGAACGTTACTGGCGGTTGCCCGGATCTGGCGCGAGCGATTACCTTTGCTCATTCAGCCGGGATGGTGGTGATGGTTGATGGTGCTCA     >  SRR4302543.5343501/1‑94 (MQ=60)

                                                                                          AGACGTCGAACGTTACTGGCGGTTGCCCGGATCTGGCGCGAGCGATTACCTTTGCTCATTCAGCCGGGATGGTGGTGATGGTTGATGGTGCTCA     <  SRR4302543.5269532/94‑1 (MQ=60)

                                                                                          AGACGTCGAACGTTACTGGCGGTTGCCCGGATCTGGCGCGAGCGATTACCTTTGCTCATTCAGCCGGGATGGTGGTGATGGTTGATGGTGCTCA     <  SRR4302543.5000144/94‑1 (MQ=60)

                                                                                           GACGTCGAACGTTACTGGCGGTTGCCCGGATCTGGCGCGAGCGATTACCTTTGCTCATTCAGCCGGGATGGTGGTGATGGTTGATGGTGCTCAG    >  SRR4302543.5830363/1‑94 (MQ=60)

                                                                                            ACGTCGAACGTTACTGGCGGTTGCCCGGATCTGGCGCGAGCGATTACCTTTGCTCATTCAGCCGGGATGGTGGTGATGGTTGATGGTGCTCAGG   <  SRR4302543.2358301/94‑1 (MQ=60)

                                                                                            ACGTCGAACGTTACTGGCGGTTGCCCGGATCTGGCGCGAGCGATTACCTTTGCTCATTCAGCCGGGATGGTGGTGATGGTTGATGGTGCTCAGG   <  SRR4302543.1203348/94‑1 (MQ=60)

                                                                                             CGTCGAACGTTACTGGCGGTTGCCCGGATCTGGCGCGAGCGATTACCTTTGCTCATTCAGCCGGGATGGTGGTGATGGTTGATGGTGCTCAGGG  <  SRR4302543.1044743/94‑1 (MQ=60)

                                                                                             CGTCGAACGTTACTGGCGGTTGCCCGGATCTGGCGCGAGCGATTACCTTTGCTCATTCAGCCGGGATGGTGGTGATGGTTGATGGGGCTCAGGG  >  SRR4302543.1785882/1‑94 (MQ=60)

TGAAATTGCCGCTTAATGCGCAGCGACTGCCGGATGTCGATTTGTTGCCAGAACTGATTACTCCCCGTAGTCGGATTCTGGCGTTGGGTCAGATGTCGAACGTTACTGGCGGTTGCCCGGATCTGGCGCGAGCGATTACCTTTGCTCATTCAGCCGGGATGGTGGTGATGGTTGATGGTGCTCAGGG  >  NC_000913/2941771‑2941957

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 0 ≤` `ATCG/ATCG` `< 2 ≤` `ATCG/ATCG` `< 21 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`