Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.

ALE, Flask, Isolate	Predicted Mutations	Mean Coverage	Total Reads	Percent Mapped	Mapped Reads	Average Read Length
A1 F1 I1 R1	1696	279.3	15874187	97.8%	15524954	93.0

Breseq alignment

BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	2,975,807	A→G	L372P (CTG→CCG)	lysA ←	diaminopimelate decarboxylase

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	2,975,807	0	A	G	99.4%	1059.0 / ‑3.7	336	L372P (CTG→CCG)	lysA	diaminopimelate decarboxylase
Reads supporting (aligned to +/- strand): ref base A (2/0); new base G (166/168); total (168/168)
Fisher's exact test for biased strand distribution p-value = 4.99e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 6.75e-01

Only 100 of 339 total aligned reads displayed.

GCCTGACCATTATCAAACAGAACTTCTGGTAACAGCGGACGGCTATTGTAGTTGGATGACATTGATGCGCCATATGCCCCTGTATCATGCAGTACCAGATAATCACCTGCCTTCACTTCCGGCAAGGCGCGGGTTTCAACATTTCCCCCTTCCTGCTGGGTAAAGACATCGCCCGATTCA  >  NC_000913/2975717‑2975896

 ccTGACCATTATCAAACAGAACTTCTGGTAACAGCGGACGGCTATTGTAGTTGGATGACATTGATGCGCCATATGCCCCTGTATCATGCGGTa                                                                                        >  1:7310568/1‑93 (MQ=255)

   tGACCATTATCAAACAGAACTTCTGGTAACAGCGGACGGCTATTGTAGTTGGATGACATTGATGCGCCATATGCCCCTGTATCATGCGGTAcc                                                                                      >  1:2880934/1‑93 (MQ=255)

   tGACCATTATCAAACAGAACTTCTGGTAACAGCGGACGGCTATTGTAGTTGGATGACATTGATGCGCCATATGCCCCTGTATCATGCGGTAcc                                                                                      >  2:4415774/1‑93 (MQ=255)

   tGACCATTATCAAACAGAACTTCTGGTAACAGCGGACGGCTATTGTAGTTGGATGACATTGATGCGCCATATGCCCCTGTATCATGCGGTAcc                                                                                      <  1:6829892/93‑1 (MQ=255)

    gACCATTATCAAACAGAACTTCTGGTAACAGCGGACGGCTATTGTAGTTGGATGACATTGATGCGCCATATGCCCCTGTATCATGCGGTACCa                                                                                     <  1:4208749/93‑1 (MQ=255)

    gACCATTATCAAACAGAACTTCTGGTAACAGCGGACGGCTATTGTAGTTGGATGACATTGATGCGCCATATGCCCCTGTATCATGCGGTACCa                                                                                     >  2:4601754/1‑93 (MQ=255)

      ccATTATCAAACAGAACTTCTGGTAACAGCGGACGGCTATTGTAGTTGGATGACATTGATGCGCCATATGCCCCTGTATCATGCGGTACCAGa                                                                                   >  1:4024805/1‑93 (MQ=255)

       cATTATCAAACAGAACTTCTGGTAACAGCGGACGGCTATTGTAGTTGGATGACATTGATGCGCCATATGCCCCTGTATCATGCGGTACCAGAt                                                                                  >  2:5236049/1‑93 (MQ=255)

       cATTATCAAACAGAACTTCTGGTAACAGCGGACGGCTATTGTAGTTGGATGACATTGATGCGCCATATGCCCCTGTATCATGCGGTACCAGAt                                                                                  <  2:1286222/93‑1 (MQ=255)

       cATTATCAAACAGAACTTCTGGTAACAGCGGACGGCTATTGTAGTTGGATGACATTGATGCGCCATATGCCCCTGTATCATGCGGTACCAGAt                                                                                  <  2:6217225/93‑1 (MQ=255)

       cATTATCAAACAGAACTTCTGGTAACAGCGGACGGCTATTGTAGTTGGATGACATTGATGCGCCATATGCCCCTGTATCATGCGGTACCAGAt                                                                                  <  1:4354296/93‑1 (MQ=255)

        aTTATCAAACAGAACTTCTGGTAACAGCGGACGGCTATTGTAGTTGGATGACATTGATGCGCCATATGCCCCTGTATCATGCGGTACCAGATa                                                                                 >  2:2081393/1‑93 (MQ=255)

         ttATGAAACAGAACTTCTGGTAACAGCGGACGGCTATTGTAGTTGGATGACATTGATGCGCCATATGCCCCTGTATCATGCGGTACCAGATaa                                                                                <  1:6654041/93‑1 (MQ=255)

         ttATCAAACAGAACTTCTGGTAACAGCGGACGGCTATTGTAGTTGGATGACATTGATGCGCCATATGCCTCTGTATCATGCGGTACCAGATaa                                                                                >  2:4307340/1‑93 (MQ=255)

         ttATCAAACAGAACTTCTGGTAACAGCGGACGGCTATTGTAGTTGGATGACATTGATGCGCCATATGCCCCTGTATCATGCGGTACCAGATaa                                                                                >  2:7290654/1‑93 (MQ=255)

         ttATCAAACAGAACTTCTGGTAACAGCGGACGGCTATTGTAGTTGGATGACATTGATGCGCCATATGCCCCTGTATCATGCGGTACCAGATaa                                                                                >  2:5551300/1‑93 (MQ=255)

          tATCAAACAGAACTTCTGGTAACAGCGGACGGCTATTGTAGTTGGATGACATTGATGCGCCATATGCCCCTGTATCATGCGGTACCAGATAAt                                                                               <  1:6945683/93‑1 (MQ=255)

           aTCAAACAGAACTTCTGGTAACAGCGGACGGCTATTGTAGTTGGATGACATTGATGCGCCATATGCCCCTGTATCATGCGGTACCAGATAATc                                                                              >  2:4195304/1‑93 (MQ=255)

           aTCAAACAGAACTTCTGGTAACAGCGGACGGCTATTGTAGTTGGATGACATTGATGCGCCATATGCCCCTGTATCATGCGGTACCAGATAATc                                                                              <  1:6344153/93‑1 (MQ=255)

            tCAAACAGAACTTCTGGTAACAGCGGACGGCTATTGTAGTTGGATGACATTGATGCGCCATATGCCCCTGTATCATGCGGTACCAGATAATCa                                                                             >  1:179694/1‑93 (MQ=255)

            tCAAACAGAACTTCTGGTAACAGCGGACGGCTATTGTAGTTGGATGACATTGATGCGCCATATGCCCCTGTATCATGCGGTACCAGATAATCa                                                                             <  1:5000795/93‑1 (MQ=255)

             cAAACAGAACTTCTGGTAACAGCGGACGGCTATTGTAGTTGGATGACATTGATGCGCCATATGCCCCTGTATCATGCGGTACCAGATAATCAc                                                                            <  2:1684527/93‑1 (MQ=255)

             cAAACAGAACTTCTGGTAACAGCGGACGGCTATTGTAGTTGGATGACATTGATGCGCCATATGCCCCTGTATCATGCGGTACCAGATAATCAc                                                                            >  1:1445592/1‑93 (MQ=255)

              aaaCAGAACTTCTGGTAACAGCGGACGGCTATTGTAGTTGGATGACATTGATGCGCCATATGCCCCTGTATCATGCGGTACCAGATAATCAct                                                                           >  1:2254199/1‑92 (MQ=255)

              aaaCAGAACTTCTGGTAACAGCGGACGGCTATTGTAGTTGGATGACATTGATGCGCCATATGCCCCTGTATCATGCGGTACCAGATAATCAcc                                                                           >  2:117905/1‑93 (MQ=255)

              aaaCAGAACTTCTGGTAACAGCGGACGGCTATTGTAGTTGGATGACATTGATGCGCCATATGCCCCTGTATCATGCGGTACCAGATAATCAcc                                                                           <  1:2768860/93‑1 (MQ=255)

              aaaCAGAACTTCTGGTAACAGCGGACGGCTATTGTAGTTGGATGACATTGATGCGCCATATGCCCCTGTATCATGCGGTACCAGATAATCAcc                                                                           <  2:5992270/93‑1 (MQ=255)

               aaCAGAACTTCTGGTAACAGCGGACGGCTATTGTAGTTGGATGACATTGATGCGCCATATGCCCCTGTATCATGCGGTACCAGATAATCACCt                                                                          >  1:6454519/1‑93 (MQ=255)

               aaCAGAACTTCTGGTAACAGCGGACGGCTATTGTAGTTGGATGACATTGATGCGCCATATGCCCCTGTATCATGCGGTACCAGATAATCACCt                                                                          <  1:4133115/93‑1 (MQ=255)

               aaCAGAACTTCTGGTAACAGCGGACGGCTATTGTAGTTGGATGACATTGATGCGCCATATGCCCCTGTATCATGCGGTACCAGATAATCACCt                                                                          <  2:3289962/93‑1 (MQ=255)

                aCAGAACTTCTGGTAACAGCGGACGGCTATTGTAGTTGGATGACATTGATGCGCCATATGCCCCTGTATCATGCGGTACCAGATAATCACCTg                                                                         >  2:2236514/1‑93 (MQ=255)

                   gtaCTTCTGGTAACAGCGGACGGCTATTGTAGTTGGATGACATTGATGCTCCATATGCCCCTGTATCATGCGGTACCAGAGAATCACCTGCCt                                                                      >  2:7034388/3‑93 (MQ=255)

                   gAACTTCTGGTAACAGCGGACGGCTATTGTAGTTGGATGACATTGATGCGCCATATGCCCCTGTATCATGCGGTACCAGATAATCACCTGCCt                                                                      <  1:624393/93‑1 (MQ=255)

                    aaCTTCTGGTAACAGCGGACGGCTATTGTAGTTGGATGACATTGATGCGCCATATGCCCCTGTATCATGCGGTACCAGATAATCACCTGCCtt                                                                     >  2:6514617/1‑93 (MQ=255)

                       ttCTGGTAACAGCGGACGGCTATTGTAGTTGGATGACATTGATGCGCCATATGCCCCTGTATCATGCGGTACCAGATAATCACCTGCCTTCAc                                                                  <  2:3474811/93‑1 (MQ=255)

                         cTGGTAACAGCGGACGGCTATTGTAGTTGGATGACATTGATGCGCCATATGCCCCTGTATCATGCGGTACCAGATAATCACCTGCCTTCACtt                                                                >  1:829785/1‑93 (MQ=255)

                          tGGTAACAGCGGACGGCTATTGTAGTTGGATGACATTGATGCGCCATATGCCCCTGTATCATGCGGTACCAGATAATCACCTGCCTTCACTTc                                                               >  1:3684908/1‑93 (MQ=255)

                           ggTAACAGCGGACGGCTATTGTAGTTGGATGACATTGATGCGCCATATGCCCCTGTATCATGCGGTACCAGATAATCACCTGCCTTCACTTcc                                                              <  1:721676/93‑1 (MQ=255)

                            gTAACAGCGGACGGCTATTGTAGTTGGATGACATTGATGCGCCATATGCCCCTGTATCATGCGGTACCAGATAATCACCTGCCTTCACTTcgg                                                             >  1:2541944/1‑91 (MQ=255)

                             tAACAGCGGACGGCTATTGTAGTTGGATGACATTGATGCGCCATATGCCCCTGTATCATGCGGTACCAGATAATCACCTGCCTTCACTTCCgg                                                            >  2:3113606/1‑93 (MQ=255)

                              aaCAGCGGACGGCTATTGTAGTTGGATGACATTGATGCGCCATATGCCCCTGTATCATGCGGTACCAGATAATCACCTGCCTTCACTTCCGGc                                                           >  1:5204950/1‑93 (MQ=255)

                                cAGCGGACGGCTATTGTAGTTGGATGACATTGATGCGCCATATGCCCCTGTATCATGCGGTACCAGATAATCACCTGCCTTCACTTCCGGCaa                                                         >  1:527425/1‑93 (MQ=255)

                                 aGCGGACGGCTATTGTAGTTGGATGACATTGATGCGCCATATGCCCCTGTATCATGCGGTACCAGATAATCACCTGCCTTCACTTCCGGCAAg                                                        >  2:4950877/1‑93 (MQ=255)

                                  gCGGACGGCTATTGTAGTTGGATGACATTGATGCGCCATATGCCCCTGTATCATGCGGTACCAGATAATCACCTGCCTTCACTTCCGGCAAgg                                                       >  2:7886138/1‑93 (MQ=255)

                                  gCGGACGGCTATTGTAGTTGGATGACATTGATGCGCCATATGCCCCTGTATCATGCGGTACCAGATAATCACCTGCCTTCACTTCCGGCAAgg                                                       <  2:406931/93‑1 (MQ=255)

                                   cGGACGGCTATTGTAGTTGGATGACATTGATGCGCCATATGCCCCTGTATCATGCGGTACCAGATAATCACCTGCCTTCACTTCCGGCAAGgc                                                      <  2:4856117/93‑1 (MQ=255)

                                   cGGACGGCTATTGTAGTTGGATGACATTGATGCGCCATATGCCCCTGTATCATGCGGTACCAGATAATCACCTGCCTTCACTTCCGGCAAGgc                                                      <  1:3548703/93‑1 (MQ=255)

                                     gACGGCTATTGTAGTTGGATGACATTGATGCGCCATATGCCCCTGTATCATGCGGTACCAGATAATCACCTGCCTTCACTTCCGGCAAGgcgc                                                    <  1:5058728/93‑1 (MQ=255)

                                     gACGGCTATTGTAGTTGGATGACATTGATGCGCCATATGCCCCTGTATCATGCGGTACCAGATAATCACCTGCCTTCACTTCCGGCAAGgcgc                                                    >  2:316959/1‑93 (MQ=255)

                                     gACGGCTATTGTAGTTGGATGAAATTGATGCGCCATATGCCCCTGTATCATGCGGTACCAGATAATCACCTGCCTTCACTTCCGGCAAGgcga                                                    >  2:2197941/1‑92 (MQ=255)

                                      aCGGCTATTGTAGTTGGATGACATTGATGCGCCATATGCCCCTGTATCATGCGGTACCAGATAATCACCTGCCTTCACTTCCGGCAAGGcgcg                                                   <  2:7674728/93‑1 (MQ=255)

                                         gCTATTGTAGTTGGATGACATTGATGCGCCATATGCCCCTGTATCATGCGGTACCAGATAATCACCTGCCTTCACTTCCGGCAAGGCGCGGGt                                                >  2:4930914/1‑93 (MQ=255)

                                         gCTATTGTAGTTGGATGACATTGATGCGCCATATGCCCCTGTATCATGCGGTACCAGATAATCACCTGCCTTCACTTCCGGCAAGGCGCGGGt                                                >  1:1565410/1‑93 (MQ=255)

                                           tATTGTAGTTGGATGACATTGATGCGCCATATGCCCCTGTATCATGCGGTACCAGATAATCACCTGCCTTCACTTCCGGCAAGGCGCGGGttt                                              >  1:4218563/1‑93 (MQ=255)

                                           tATTGTAGTTGGATGACATTGATGCGCCATATGCCCCTGTATCATGCGGTACCAGATAATCACCTGCCTTCACTTCCGGCAAGGCGCGGGttt                                              >  1:3327504/1‑93 (MQ=255)

                                            aTTGTAGTTGGATGACATTGATGCGCCATATGCCCCTGTATCATGCGGTACCAGATAATCACCTGCCTTCACTTCCGGCAAGGCGCGGGTTTc                                             <  1:6417410/93‑1 (MQ=255)

                                            aTTGTAGTTGGATGACATTGATGCGCCATATGCCCCTGTATCATGCGGTACCAGATAATCACCTGCCTTCACTTCCGGCAAGGCGCGGGTTTc                                             <  2:2824726/93‑1 (MQ=255)

                                            aTTGTAGTTGGATGACATTGATGCGCCATATGCCCCTGTATCATGCGGTACCAGATAATCACCTGCCTTCACTTCCGGCAAGGCGCGGGTTTc                                             <  2:1429939/93‑1 (MQ=255)

                                            aTTGTAGTTGGATGACATTGATGCGCCATATGCCCCTGTATCATGCGGTACCAGATAATCACCTGCCTTCACTTCCGGCAAGGCGCGGGTTTc                                             >  1:7639631/1‑93 (MQ=255)

                                             ttGTAGTTGGATGACATTGATGCGCCATATGCCCCTGTATCATGCGGTACCAGATAATCACCTGCCTTCACTTCCGGCAAGGCGCGGGTTTCa                                            >  1:173000/1‑93 (MQ=255)

                                              tGTAGTTGGATGACATTGATGCGCCATATGCCCCTGTATCATGCGGTACCAGATAATCACCTGCCTTCACTTCCGGCAAGGCGCGGGTTTCaa                                           >  1:866458/1‑93 (MQ=255)

                                              tGTAGTTGGATGACATTGATGCGCCATATGCCCCTGTATCATGCAGTACCAGATAATCACCTGCCTTCACTTCCGGCAAGGCGCGGGATTCaa                                           >  2:7618485/1‑93 (MQ=255)

                                               gTAGTTGGATGACATTGATGCGCCATATGCCCCTGTATCATGCGGTACCAGATAATCACCTGCCTTCACTTCCGGCAAGGCGCGGGTTTCAAc                                          <  2:4636641/93‑1 (MQ=255)

                                               gTAGTTGGATGACATTGATGCGCCATATGCCCCTGTATCATGCGGTACCAGATAATCACCTGCCTTCACTTCCGGCAAGGCGCGGGTTTCAAc                                          >  2:2533308/1‑93 (MQ=255)

                                                    tGGATGACATTGATGCGCCATATGCCCCTGTATCATGCGGTACCAGATAATCACCTGCCTTCACTTCCGGCAAGGCGCGGGTTTCAACATTTc                                     <  1:1208746/93‑1 (MQ=255)

                                                    tGGATGACATTGATGCGCCATATGCCCCTGTATCATGCGGTACCAGATAATCACCTGCCTTCACTTCCGGCAAGGCGCGGGTTTCAACATTTc                                     <  2:1366629/93‑1 (MQ=255)

                                                     ggATGACATTGATGCGCCATATGCCCCTGTATCATGCGGTACCAGATAATCACCTGCCTTCACTTCCGGCAAGGCGCGGGTTTCAACATTTcc                                    >  2:6425328/1‑93 (MQ=255)

                                                     ggATGACATTGATGCGCCATATGCCCCTGTATCATGCGGTACCAGATAATCACCTGCCTTCACTTCCGGCAAGGCGCGGGGTTCAACATTTcc                                    >  1:5231789/1‑93 (MQ=255)

                                                        tGACATTGATGCGCCATATGCCCCTGTATCATGCGGTACCAGATAATCACCTGCCTTCACTTCCGGCAAGGCGCGGGTTTCAACATTTccccc                                 <  2:5818771/93‑1 (MQ=255)

                                                        tGACATTGATGCGCCATATGCCCCTGTATCATGCGGTACCAGATAATCACCTGCCTTCACTTCCGGCAAGGCGCGGGTTTCAACATTTccccc                                 <  1:37411/93‑1 (MQ=255)

                                                        tGACATTGATGCGCCATATGCCCCTGTATCATGCGGTACCAGATAATCACCTGCCTTCACTTCCGGCAAGGCGCGGGTTTCAACATTTccccc                                 >  1:3993447/1‑93 (MQ=255)

                                                         gACATTGATGCGCCATATGCCCCTGTATCATGCGGTACCAGATAATCACCTGCCTTCACTTCCGGCAAGGCGCGGGTTTCAACATTTCCCCCt                                >  1:2194518/1‑93 (MQ=255)

                                                            aTTGATGCGCCATATGCCCCTGTATCATGCGGTACCAGATAATCACCTGCCTTCACTTCCGGCAAGGCGCGGGTTTCAACATTTCCCCCTTcc                             <  1:7811526/93‑1 (MQ=255)

                                                            aTTGATGCGCCATATGCCCCTGTATCATGCGGTACCAGATAATCACCTGCCTTCACTTCCGGCAAGGCGCGGGTTTCAACATTTCCCCCTTcc                             >  2:7136812/1‑93 (MQ=255)

                                                             ttGATGCGCCATATGCCCCTGTATCATGCGGTACCAGATAATCACCTGCCTTCACTTCCGGCAAGGCGCGGGTTTCAACATTTCCCCCTTCct                            <  1:5503652/93‑1 (MQ=255)

                                                             ttGATGCGCCATATGCCCCTGTATCATGCGGTACCAGATAATCACCTGCCTTCACTTCCGGCAAGGCGCGGGTTTCAACATTTCCCCCTTCct                            >  1:490835/1‑93 (MQ=255)

                                                             ttGATGCGCCATATGCCCCTGTATCATGCGGTACCAGATAATCACCTGCCTTCACTTCCGGCAAGGCGCGGGTTTCAACATTTCCCCCTTCct                            <  1:1038556/93‑1 (MQ=255)

                                                             ttGATGCGCCATATGCCCCTGTATCATGCGGTACCAGATAATCACCTGCCTTCACTTCCGGCAAGGCGCGGGTTTCAACATTTCCCCCTTCct                            >  1:944546/1‑93 (MQ=255)

                                                                aTGCGCCATATGCCCCTGTATCATGCGGTACCAGATAATCACCTGCCTTCACTTCCGGCAAGGCGCGGGTTTCAACATTTCCCCCTTCctgct                         <  2:672849/93‑1 (MQ=255)

                                                                 tGCGCCATATGCCCCTGTATCATGCGGTACCAGATAATCACCTGCCTTCACTTCCGGCAAGGCGCGGGTTTCAACATTTCCCCCTTCctgctg                        <  1:5918248/93‑1 (MQ=255)

                                                                 tGCGCCATATGCCCCTGTATCATGCGGTACCAGATAATCACCTGCCTTCACTTCCGGCAAGGCGCGGGTTTCAACATTTCCCCCTTCctgctg                        >  1:4414874/1‑93 (MQ=255)

                                                                  gcgcCATATGCCCCTGTATCATGCGGTACCAGATAATCCCCTGCCTTCACTTCCGGCAAGGCGCGGGTTTCAACATTTCCCCCTTCCTGCTgg                       <  1:2640326/93‑1 (MQ=255)

                                                                  gcgcCATATGCCCCTGTATCATGCGGTACCAGATAATCACCTGCCTTCACTTCCGGCAAGGCGCGGGTTTCAACATTTCCCCCTTCCTGCTgg                       <  2:2980493/93‑1 (MQ=255)

                                                                       atatGCCCCTGTATCATGCGGTACCAGATAATCACCTGCCTTCACTTCCGGCAAGGCGCGGGTTTCAACATTTCCCCCTTCCTGCTGGGTaaa                  <  1:2687792/93‑1 (MQ=255)

                                                                         atGCCCCTGTATCATGCGGTACCAGATAATCACCTGCCTTCACTTCCGGCAAGGCGCGGGTTTCAACATTTCCCCCTTCCTGCTGGGTAAAGa                >  1:2417068/1‑93 (MQ=255)

                                                                         atGCCCCTGTATCATGCGGTACCAGATAATCACCTGCCTTCACTTCCGGCAAGGCGCGGGTTTCAACATTTCCCCCTTCCTGCTGGGTAAAGa                <  2:831876/93‑1 (MQ=255)

                                                                         atGCCCCTGTATCATGCGGTACCAGATAATCACCTGCCTTCACTTCCGGCAAGGCGCGGGTTTCAACATTTCCCCCTTCCTGCTGGGTAAAGa                <  2:6140301/93‑1 (MQ=255)

                                                                         atGCCCCTGTATCATGCGGTACCAGATAATCACCTGCCTTCACTTCCGGCAAGGCGCGGGTTTCAACATTTCCCCCTTCCTGCTGGGTAAAGa                <  1:7708814/93‑1 (MQ=255)

                                                                          tGCCCCTGTATCATGCGGTACCAGATAATCACCTGCCTTCACTTCCGGCAAGGCGCGGGTTTCAACATTTCTCCCTTCCTGCTGGGTCAAGAc               >  2:1740788/1‑93 (MQ=255)

                                                                          tGCCCCTGTATCATGCGGTACCAGATAATCACCTGCCTTCACTTCCGGCAAGGCGCGGGTTTCAACATTTCCCCCTTCCTGCTGGGTAAAGAc               >  2:5112591/1‑93 (MQ=255)

                                                                          tGCCCCTGTATCATGCGGTACCAGATAATCACCTGCCTTCACTTCCGGCAAGGCGCGGGTTTCAACATTTCCCCCTTCCTGCTGGGTAAAGAc               <  1:1935772/93‑1 (MQ=255)

                                                                             cccTGTATCATGCGGTACCAGATAATCACCTGCCTTCACTTCCGGCAAGGCGCGGGTTTCAACATTTCCCCCTTCCTGCTGGGTAAAGACATc            <  1:4705807/93‑1 (MQ=255)

                                                                               cTGTATCATGCGGTACCAGATAATCACCTGCCTTCACTTCCGGCAAGGCGCGGGTTTCAACATTTCCCCCTTCCTGCTGGGTAAAGACATCGc          >  2:7566151/1‑93 (MQ=255)

                                                                                tGTATCATGCGGTACCAGATAATCACCTGCCTTCACTTCCGGCAAGGCGCGGGTTTCAACATTTCCCCCTTCCTGCTGGGTAAAGACATCGcc         >  2:3717163/1‑93 (MQ=255)

                                                                                tGTATCATGCGGTACCAGATAATCACCTGCCTTCACTTCCGGCAAGGCGCGGGTTTCAACATTTCCCCCTTCCTGCTGGGTAAAGACATCGcc         <  1:1282026/93‑1 (MQ=255)

                                                                                tGTATCATGCGGTACCAGATAATCACCTGCCTTCACTTCCGGCAAGGCGCGGGTTTCAACATTTCCCCCTTCCTGCTGGGTAAAGACATCGcc         >  2:3576874/1‑93 (MQ=255)

                                                                                 gTATCATGCGGTACCAGATAATCACCTGCCTTCACTTCCGGCAAGGCGCGGGTTTCAACATTTCCCCCTTCCTGCTGGGTAAAGACATCGccc        <  1:748405/93‑1 (MQ=255)

                                                                                 gTATCATGCGGTACCAGATAATCACCTGCCTTCACTTCCGGCAAGGCGCGGGTTTCAACATTTCCCCCTTCCTGCTGGGTAAAGACATCGccc        <  1:2324405/93‑1 (MQ=255)

                                                                                  tctCATTCCGTCCCAGATAATCCCCTGACTTCGCTTCCGGCAAGGCGCGGGTTTCAACTATTCCCCCTTCCTGCTGGGTAAAGACATCGCCCg       <  2:5793894/91‑1 (MQ=255)

                                                                                  aaTCATGCGGTACCAGATAATCACCTGCCTTCACTTCCGGCAAGGCGCGGGTTTCAACATTTCCCCCTTCCTGCTGGGTAAAGACATCGCCCg       >  2:6943971/2‑93 (MQ=255)

GCCTGACCATTATCAAACAGAACTTCTGGTAACAGCGGACGGCTATTGTAGTTGGATGACATTGATGCGCCATATGCCCCTGTATCATGCAGTACCAGATAATCACCTGCCTTCACTTCCGGCAAGGCGCGGGTTTCAACATTTCCCCCTTCCTGCTGGGTAAAGACATCGCCCGATTCA  >  NC_000913/2975717‑2975896

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 20 ≤` `ATCG/ATCG` `< 29 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`

GATK/CNVnator alignment

BRESEQ :: bam2aln output

CGCGCCTGACCATTATCAAACAGAACTTCTGGTAACAGCGGACGGCTATTGTAGTTGGATGACATTGATGCGCCATATGCCCCTGTATCATGCAGTACCAGATAATCACCTGCCTTCACTTCCGGCAAGGCGCGGGTTTCAACATTTCCCCCTTCCTGCTGGGTAAAGACATCGCCCGATTCACATA  >  NC_000913/2975714‑2975900

CGCGCCTGACCATTATCAAACAGAACTTCTGGTAACAGCGGATGGCTATTGTAGTTGGATGACATTGATGCGCCATATGCCCCTGTATCATGCG                                                                                               <  SRR4302543.7964472/94‑1 (MQ=60)

CGCGCCTGACCATTATCAAACAGAACTTCTGGTAACAGCGGACGGCTATTGTAGTTGGATGACATTGATGCGCCATATGCCCCTGTATCATGCG                                                                                               <  SRR4302543.7964667/94‑1 (MQ=60)

   GCCTGACCATTATCAAACAGAACTTCTGGTAACAGCGGACGGCTATTGTAGTTGGATGACATTGATGCGCCATATGCCCCTGTATCATGCGGTA                                                                                            >  SRR4302543.7381039/1‑94 (MQ=60)

   GCCTGACCATTATCAAACAGAACTTCTGGTAACAGCGGACGGCTATTGTAGTTGGATGACATTGATGCGCCATATGCCCCTGTATCATGCGGTA                                                                                            >  SRR4302543.163780/1‑94 (MQ=60)

   GCCTGACCATTATCAAACAGAACTTCTGGTAACAGCGGACGGCTATTGTAGTTGGATGACATTGATGCGCCATATGCCCCTGTATCATGCGGTA                                                                                            <  SRR4302543.4430685/94‑1 (MQ=60)

   GCCTGACCATTATCAAACAGAACTTCTGGTAACAGCGGACGGCTATTGTAGTTGGATGACATTGATGCGCCATATGCCCCTGAATCATGCGGTA                                                                                            >  SRR4302543.952551/1‑94 (MQ=60)

    GCTGACCATTATCAAACAGAACTTCTGGTAACAGCGGACGGCTATTGTAGTTGGATGACATTGATGCGCCATATGCCCCTGTATCATGCGGTAC                                                                                           <  SRR4302543.2239393/94‑1 (MQ=60)

    CCTGACCATTATCAAACAGAACTTCTGGTAACAGCGGACGGCTATTGTAGTTGGATGACATTGATGCGCCATATGCCCCTGTATCATGCGGTAC                                                                                           <  SRR4302543.1544068/94‑1 (MQ=60)

     CTGACCGTTCTCAATCAGAACTTCTGGTAACAGCGGACGGCTATTGTAGTTGGATGACATTGATGCGCCATATGCCCCTGTATCATGCGGTACC                                                                                          <  SRR4302543.7066926/94‑1 (MQ=60)

     CTGACCATTATCAAACAGAATTACTGGTAACATTGGTCGGCTATGGTAGTTGGATGACATGGATGCGCCTTATGCCCCTGTATCATGCGGTACC                                                                                          >  SRR4302543.6093784/1‑94 (MQ=53)

     CTGACCATTATCAAACAGAACTTCTGGTAACAGCGGACGGCTATTGTAGTTGGATGACATTGATGCGCCATATGCCCCTGTATCATGCGGTACC                                                                                          >  SRR4302543.4879401/1‑94 (MQ=60)

     CTGACCATTATCAAACAGAACTTCTGGTAACAGCGGACGGCTATTGTAGTTGGATGACATTGATGCGCCATATGCCCCTGTATCATGCGGTACC                                                                                          <  SRR4302543.6511526/94‑1 (MQ=60)

     CTGACCATTATCAAACAGAACTTCTGGTAACAGCGGACGGCTATTGTAGTTGGATGACATTGATGCGCCATATGCCCCTGTATCATGCGGTACC                                                                                          >  SRR4302543.2907149/1‑94 (MQ=60)

      TGACCATTATCAAACAGAACTTCTGGTAACAGCGGACGGCTATTGTAGTTGGATGACATTGATGCGCCATATGCCCCTGTATCATGCGGTACCA                                                                                         <  SRR4302543.2344891/94‑1 (MQ=60)

      TGACCATTATCAAACAGAACTTCTGGTAACAGCGGACGGCTATTGTAGTTGGATGACATTGATGCGCCATATGCCCCTGTATCATGCGGTACCA                                                                                         >  SRR4302543.532/1‑94 (MQ=60)

      TGACCATTATCAAACAGAACTTCTGGTAACAGCGGACGGCTATTGTAGTTGGATGACATTGATGCGCCATATGCCCCTGTATCATGCGGTACCA                                                                                         >  SRR4302543.7299980/1‑94 (MQ=60)

      TGACCATTATCAAACAGAACTTCTGGTAACAGCGGACGGCTATTGTAGTTGGATGACATTGATGCGCCATATGCCCCTGTATCATGCGGTACCA                                                                                         <  SRR4302543.6894370/94‑1 (MQ=60)

      CGACCATTATCAAACAGAACTTCTGGTAACAGCGGACGGCTATTGTAGTTGGATGACATTGATGCGCCATATGCCCCTGTATCATGCGGTACCA                                                                                         <  SRR4302543.6606392/94‑1 (MQ=60)

       GACCATTATCAAACAGAACTTCTGGTAACAGCGGACGGCTATTGTAGTTGGATGACATTGATGCGCCATATGCCCCTGTATCATGCGGTACCAG                                                                                        <  SRR4302543.5316124/94‑1 (MQ=60)

       GACCATTATCAAACAGAACTTCTGGTAACAGCGGACGGCTATTGTAGTTGGATGACATTGATGCGCCATATGCCCCTGTATCATGCGGTACCAG                                                                                        <  SRR4302543.4246909/94‑1 (MQ=60)

       GACCATTATCAAACAGAACTTCTGGTAACAGCGGACGGCTATTGTAGTTGGATGACATTGATGCGCCATATGCACCTGTATCATGCGGTACCAG                                                                                        >  SRR4302543.4632623/1‑94 (MQ=60)

        TCCATTATCAAACAGAACTTCTGGTAACAGCGGACGGCTATTGTAGTTGGATGACATTGATGCGCCATATGCCCCTGTATCATGCGGTACCAGA                                                                                       >  SRR4302543.4060768/1‑94 (MQ=60)

          CATTATCAAACAGAACTTCTGGTAACAGCGGACGGCTATTGTAGTTGGATGACATTGATGCGCCATATGCCCCTGTATCATGCGGTACCAGATA                                                                                     <  SRR4302543.2847147/94‑1 (MQ=60)

          CATTATCAAACAGAACTTCTGGTAACAGCGGACGGCTATTGTAGTTGGATGACATTGATGCGCCATATGCCCCTGTATCATGCGGTACCAGATA                                                                                     <  SRR4302543.4393756/94‑1 (MQ=60)

            TTATGAAACAGAACTTCTGGTAACAGCGGACGGCTATTGTAGTTGGATGACATTGATGCGCCATATGCCCCTGTATCATGCGGTACCAGATAAT                                                                                   <  SRR4302543.6716861/94‑1 (MQ=60)

            TTATCAAACAGAACTTCTGGTAACAGCGGACGGCTATTGTAGTTGGATGACATTGATGCGCCATATGCCCCTGTATCATGCGGTACCAGATAAT                                                                                   >  SRR4302543.4247321/1‑94 (MQ=60)

            TTATCAAACAGAACTTCTGGTAACAGCGGACGGCTATTGTAGTTGGATGACATTGATGCGCCATATGCCCCTGTATCATGCGGTACCAGATAAT                                                                                   >  SRR4302543.2271586/1‑94 (MQ=60)

            ATATCAAACAGAACTTCTAGTAACAGCGGACGGCTATTGTAGTTGGATGACATTGATGCGCCATATGCCCCGGTATCATGCGGTACCAGATAAT                                                                                   <  SRR4302543.3810662/94‑1 (MQ=60)

             TATCAAACAGAACTTCTGGTAACAGCGGACGGCTATTGTAGTTGGATGACATTGATGCGCCATATGCCCCTGTATCATGCGGTACCAGATAATC                                                                                  <  SRR4302543.271069/94‑1 (MQ=60)

             TATCAAACAGAACTTCTGGTAACAGCGGACGGCTATTGTAGTTGGATGACATTGATGCGCCATATGCCCCTGTATCATGCGGTACCAGATAATC                                                                                  <  SRR4302543.7011035/94‑1 (MQ=60)

             TATCAAACAGAACTTCTGGTAACAGCGGACGGCTATTGTAGTTGGATGACATTGATGCGCCATATGCCCCTGTATCATGCGGTACCAGATAATC                                                                                  <  SRR4302543.6412906/94‑1 (MQ=60)

              ATCAAACAGAACTTCTGGTAACAGCGGACGGCTATTGTAGTTGGATGACATTGATGCGCCATATGCCCCTGTATCATGCGGTACCAGATAATCA                                                                                 >  SRR4302543.181227/1‑94 (MQ=60)

              ATCAAACAGAACTTCTGGTAACAGCGGACGGCTATTGTAGTTGGATGACATTGATGCGCCATATGCCCCTGTATCATGCGGTACCAGATAATCA                                                                                 <  SRR4302543.6403812/94‑1 (MQ=60)

              ATCAAACAGAACTTCTGGTAACAGCGGACGGCTATTGTAGTTGGATGACATTGATGCGCCATATGCCCCTGTATCATGCGGTACCAGATAATCA                                                                                 <  SRR4302543.3877739/94‑1 (MQ=60)

              ATCAAACAGAACTTCTGGTAACAGCGGACGGCTATTGTAGTTGGATGACATTGATGCGCCATATGCCCCTGTATCATGCGGTACCAGATAATCA                                                                                 >  SRR4302543.837615/1‑94 (MQ=60)

               TCAAACAGAACTTCTGGTAACAGCGGACGGCTATTGTAGTTGGATGACATTGATGCGCCATATGCCCCTGTATCATGCGGTACCAGATAATCAC                                                                                <  SRR4302543.5046310/94‑1 (MQ=60)

               TCAAACAGAACTTCTGGTAACAGCGGACGGCTATTGTAGTTGGATGACATTGATGCGCCATATGCCCCTGTATCATGCGGTACCAGATAATCAC                                                                                >  SRR4302543.1458652/1‑94 (MQ=60)

                CAAACAGAACTTCTGGTAACAGCGGACGGCTATTGTAGTTGGATGACATTGATGCGCCATATGCCCCTGTATCATGCGGTACCAGATAATCACT                                                                               >  SRR4302543.2274703/1‑94 (MQ=60)

                CAAACAGAACTTCTGGTAACAGCGGACGGCTATTGTAGTTGGATGACATTGATGCGCCATATGCACCTGTATCATGCGGTACCAGATAATCACC                                                                               >  SRR4302543.2274704/1‑94 (MQ=60)

                 AAACAGAACTTCTGGTAACAGCGGACGGCTATTGTAGTTGGATGACATTGATGCGCCATATGCCCCTGTATCATGCGGTACCAGATAATCACCT                                                                              >  SRR4302543.6515338/1‑94 (MQ=60)

                 AAACAGAACTTCTGGTAACAGCGGACGGCTATTGTAGTTGGATGACATTGATGCGCCATATGCCCCTGTATCATGCGGTACCAGATAATCACCT                                                                              <  SRR4302543.2794056/94‑1 (MQ=60)

                 AAACAGAACTTCTGGTAACAGCGGACGGCTATTGTAGTTGGATGACATTGATGCGCCATATGCCCCTGTATCATGCGGTACCAGATAATCACCT                                                                              >  SRR4302543.2809264/1‑94 (MQ=60)

                 AAACAGAACTTCTGGTAACAGCGGACGGCTATTGTAGTTGGATGACATTGATGCGCCATATGCCCCTGTATCATGCGGTACCAGATAATCACCT                                                                              <  SRR4302543.5100330/94‑1 (MQ=60)

                 AAACAGAACTTCTGGTAACAGCGGACGGCTATTGTAGTTGGATGACATTGATGCGCCATATGCCCCTGTATCATGCGGTACCAGATAATCACCT                                                                              <  SRR4302543.2026831/94‑1 (MQ=60)

                 AAACAGAACTTCTGGTAACAGCGGACGGCTATTGTAGTTGGATGACATTGATGCGCCATATGCCCCTGTATCATGCGGTACCAGATAATCACCT                                                                              <  SRR4302543.3642419/94‑1 (MQ=60)

                 AAACAGAACTTCTGGTAACAGCGGACGGCTATTGTAGTTGGATGACATTGATGCGCCATATGCCCCTGTATCATGCGGTACCAGATAATCACCT                                                                              <  SRR4302543.5294252/94‑1 (MQ=60)

                 AAACAGAACTTCTGGTAACAGCGGACGGCTATTGTAGTTGGATGACATTGATGCGCCATATGCCCCTGTATCATGCGGTACCAGATAATCACCT                                                                              <  SRR4302543.609055/94‑1 (MQ=60)

                  AACAGAACTTCTGGTAACAGCGGACGGCTATTGTAGTTGGATGACATTGATGCGCCATATGCCCCTGTATCATGCGGTACCAGATAATCACCTG                                                                             <  SRR4302543.6498062/94‑1 (MQ=60)

                  AACAGAACTTCTGGTAACAGCGGACGGCTATTGTAGTTGGATGACATTGATGCGCCATATGCCCCTGTATCATGCGGTACCAGATAATCACCTG                                                                             <  SRR4302543.49125/94‑1 (MQ=60)

                  AACAGAACTTCTGGTAACAGCGGACGGCTATTGTAGTTGGATGACATTGATGCGCCATATGCCCCTGTATCATGCGGTACCAGATAATCACCTG                                                                             <  SRR4302543.4170407/94‑1 (MQ=60)

                   ACAGAACTTCTGGTAACAGCGGACGGCTATTGTAGTTGGATGACATTGATGCGCCATATGCCCCTGTATCATGCGGTACCAGATAATCACCTGC                                                                            >  SRR4302543.3488676/1‑94 (MQ=60)

                    CAGAACTTCTGGTAACAGCGGACGGCTATTGTAGTTGGATGACATTGATGCGCCATATGCCCCTGTATCATGCGGTACCAGATAATCACCTGCC                                                                           >  SRR4302543.7815424/1‑94 (MQ=60)

                    CAGAACTTCTGGTAACAGCGGACGGCTATTGTAGTTGGATGACATTGATGCGCCATATGCCCCTGTATCATGCGGTACCAGATAATCACCTGCC                                                                           >  SRR4302543.1982744/1‑94 (MQ=60)

                     AGAACTTCTGGTAACAGCGGACGGCTATTGTAGTTGGATGACATTGATGCGCCATATGCCCCTGTATCATGCGGTACCAGATAATCACCTGCCT                                                                          <  SRR4302543.7790634/94‑1 (MQ=60)

                      GAACTTCTGGTAACAGCGGACGGCTATTGTAGTTGGATGACATTGATGCGCCATATGCCCCTGTATCATGCGGTACCAGATAATCACCTGCCTT                                                                         <  SRR4302543.630108/94‑1 (MQ=60)

                       ACCTTCTGGTAACAGCGGACGGCTATTGTAGTTGGATGACATTGATGCGCCATATGCCCCTGTATCATGCGGTACCAGATAATCACCTGCCTTC                                                                        <  SRR4302543.4987973/94‑1 (MQ=60)

                        ACTTCTGGTAACAGCGGACGGCTATTGTAGTTGGATGACATTGATGCGCCATATGCCCCTGTATCATGCGGTACCAGATAATCACCTGCCTTCA                                                                       <  SRR4302543.998843/94‑1 (MQ=60)

                        ACTTCTGGTAACAGCGGACAGCTATTGTAGTTGGATGACATTGATGCGCCATATGCACCTGTATAATGCGGTACCAGATAATCACCTGCattcg                                                                       >  SRR4302543.1891577/1‑89 (MQ=60)

                         CTTCTGGTAACAGCGGACGGCTATTGTAGTTGGATGACATTGATGCGCCATATGCCCCTGTATCATGCGGTACCAGATAATCACCTGCCTTCAC                                                                      <  SRR4302543.4364733/94‑1 (MQ=60)

                          TTCTGGTAACAGCGGACGGCTATTGTAGTTGGATGACATTGATGCGCCATATGCCCCTGTATCATGCGGTACCAGATAATCACCTGCCTTCACT                                                                     <  SRR4302543.7898550/94‑1 (MQ=60)

                           TCTGGTAACAGCGGACGGCTATTGTAGTTGGATGACATTGATGCGCCATATGCCCCTGTATCATGCGGTACCAGATAATCACCTGCCTTCACTT                                                                    >  SRR4302543.837098/1‑94 (MQ=60)

                            CTGGTAACAGCGGACGGCTATTGTAGTTGGATGACATTGATGCGCCATATGCCCCTGTATCATGCGGTACCAGATAATCACCTGCCTTCACTTC                                                                   >  SRR4302543.162404/1‑94 (MQ=60)

                            CTGGTAACAGCGGACGGCTATTGTAGTTGGATGACATTGATGCGCCATATGCCCCTGTATCATGCGGTACCAGATAATCACCTGCCTTCACTTC                                                                   >  SRR4302543.3717287/1‑94 (MQ=60)

                             TGGTAACAGCGGACGGCTATTGTAGTTGGATGACATTGATGCGCCATATGCCCCTGTATCATGCGGTACCAGATAATCACCTGCCTTCACTTCC                                                                  <  SRR4302543.5239212/94‑1 (MQ=60)

                              GGTAACAGCGGACGGCTATTGTAGTTGGATGACATTGATGCGCCATATGCCCCTGTATCATGCGGTACCAGATAATCACCTGCCTTCACTTCGG                                                                 >  SRR4302543.2565120/1‑94 (MQ=60)

                              GGTAACAGCGGACGGCTATTGTAGTTGGATGACATTGATGCGCCATATGCCCCTGTATCATGCGGTACCAGATAATCACCTGCCTTCACTTCCG                                                                 <  SRR4302543.728188/94‑1 (MQ=60)

                              GGTAACAGCGGACGGCTATTGTAGTTGGATGACATTGATGCGCCATATGCCCCTGTATCATGCGGTACCAGATAATCACCTGCCTTCACTTCCG                                                                 <  SRR4302543.4126243/94‑1 (MQ=60)

                               GTAACAGCGGACGGCTATTGTAGTTGGATGACATTGATGCGCCATATGCCCCTGTATCATGCGGTACCAGATAATCACCTGCCTTCACTTCCGG                                                                >  SRR4302543.1911295/1‑94 (MQ=60)

                               GTAACAGCGGACGGCTATTGTAGTTGGATGACATTGATGCGCCATATGCCCCTGTATCATGCGGTACCAGATAATCACCTGCCTTCACTTCCGG                                                                >  SRR4302543.4368450/1‑94 (MQ=60)

                               GTAACAGCGGACGGCTATTGTAGTTGGATGACATTGATGCGCCATATGCCCCTGTATCATGCGGTACCAGATAATCACCTGCCTTCACTTCCGG                                                                >  SRR4302543.1466283/1‑94 (MQ=60)

                               GTAACAGCGGACGGCTATTGTAGTTGGATGACATTGATGCGCCATATGCCCCTGTATCATGCGGTACCAGATAATCACCTGCCTTCACTTCCGG                                                                <  SRR4302543.5852066/94‑1 (MQ=60)

                                TAACAGCGGACGGCTATTGTAGTTGGATGACATTGATGCGCCATATGCCCCTGTATCATGCGGTACCAGATAATCACCTGCCTTCACTTCCGGC                                                               >  SRR4302543.5251868/1‑94 (MQ=60)

                                 AACAGCGGACGGCTATTGTAGTTGGATGACATTGATGCGCCATATGCCCCTGTATCATGCGGTACCAGATAATCACCTGCCTTCACTTCCGGCA                                                              >  SRR4302543.6894689/1‑94 (MQ=60)

                                  ACAGCGGACGGCTATTGTAGTTGGATGACATTGATGCGCCATATGCCCCTGTATCATGCGGTACCAGATAATCACCTGCCTTCACTTCCGGCAA                                                             >  SRR4302543.532305/1‑94 (MQ=60)

                                  ACAGCGGACGGCTATTGTAGTTGGATGACATTGATGCGCCATATGCCCCTGTATCATGCGGTACCAGATAATCACCTGCCTTCACTTCCGGCAA                                                             <  SRR4302543.915935/94‑1 (MQ=60)

                                  ACAGCGGACGGCTATTGTAGTTGGATGACATTGATGCGCCATATGCCCCTGTATCATGCGGTACCAGATAATCACCTGCCTTCACTTCCGGCAA                                                             <  SRR4302543.277328/94‑1 (MQ=60)

                                     GCGGACGGCTATTGTAGTTGGATGACATTGATGCGCCATATGCCCCTGTATCATGCGGTACCAGATAATCACCTGCCTTCACTTCCGGCAAGGC                                                          <  SRR4302543.3514803/94‑1 (MQ=60)

                                      CGGACGGCTATTGTAGTTGGATGACATTGATGCGCCATATGCCCCTGTATCATGCGGTACCAGATAATCACCTGCCTTCACTTCCGGCAAGGCG                                                         >  SRR4302543.6724730/1‑94 (MQ=60)

                                      CGGACGGCTATTGTAGTTGGATGACATTGATGCGCCATATGCCCCTGTATCATGCGGTACCAGATAATCACCTGCCTTCACTTCCGGCAAGGCG                                                         <  SRR4302543.3580196/94‑1 (MQ=60)

                                      CGGACGGCTATTGTAGTTGGATGACATTGATGCGCCATATGCCCCTGTATCATGCGGTACCAGATAATCACCTGCCTTCACTTCCGGCAAGGCG                                                         <  SRR4302543.1804670/94‑1 (MQ=60)

                                        GACGGCTATTGTAGTTGGATGACATTGATGCGCCATATGGCCCTGTATCATGCGGTACCAGATAATAACCTGCCTTCACTTCCGGCAAGGCGCG                                                       >  SRR4302543.3962230/1‑94 (MQ=60)

                                        GACGGCTATTGTAGTTGGATGACATTGATGCGCCATATGCCCCTGTATCATGCGGTACCAGATAATCACCTGCCTTCACTTCCGGCAAGGCGCG                                                       <  SRR4302543.776896/94‑1 (MQ=60)

                                        GACGGCTATTGTAGTTGGATGACATTGATGCGCCATATGCCCCTGTATCATGCGGTACCAGATAATCACCTGCCTTCACTTCCGGCAAGGCGCG                                                       <  SRR4302543.5104704/94‑1 (MQ=60)

                                         ACGGCTATTGTAGTTGGATGACATTGATGCGCCATATGCCCCTGTATCATGCGGTACCAGATAATCACCTGCCTTCACTTCCGGCAAGGCGCGG                                                      <  SRR4302543.7868962/94‑1 (MQ=60)

                                           GGCTATTGTAGTTGGATGACATTGATGCGCCATATGCCCCTGTATCATGCGGTACCAGATAATCACCTGCCTTCACTTCCGGCAAGGCGCGGGT                                                    >  SRR4302543.4184280/1‑94 (MQ=60)

                                           GGCTATTGTAGTTGGATGACATTGATGCGCCATATGCCCCTGTATCATGCGGTACCAGATAATCACCTGCCTTCACTTCCGGCAAGGCGCGGGT                                                    >  SRR4302543.1579391/1‑94 (MQ=60)

                                           GGCTATTGTAGTTGGATGACATTGATGCGCCATATGCCCCTGTATCATGCGGTACCAGATAATCACCTGCCTTCACTTCCGGCAAGGCGCGGGT                                                    >  SRR4302543.292472/1‑94 (MQ=60)

                                            GCTATTGTAGTTGGATGACATTGATGCGCCATATGCCCCTGTATCATGCGGTACCAGATAATCACCTGCCTTCACTTCCGGCAAGGCGCGGGTT                                                   <  SRR4302543.6406120/94‑1 (MQ=60)

                                            GCTATTGTAGTTGGATGACATTGATGCGCCATATGCCCCTGTATCATGCGGTACCAGATAATCACCTGCCTTCACTTCCGGCAAGGCGCGGGTT                                                   >  SRR4302543.6595248/1‑94 (MQ=60)

                                             CTATTGTAGTTGGATGACATTGATGCGCCATATGCCCCTGTATCATGCGGTACCAGATAATCACCTGCCTTCACTTCCGGCAAGGCGCGGGTTT                                                  <  SRR4302543.6078894/94‑1 (MQ=60)

                                             CTATTGTAGTTGGATGACATTGATGCGCCATATGCCCCTGTATCATGCGGTACCAGATAATCACCTGCCTTCACTTCCGGCAAGGCGCGGGTTT                                                  >  SRR4302543.7564502/1‑94 (MQ=60)

                                             CTATTGTAGTTGGATGACATTGATGCGCCATATGCCCCTGTATCATGCGGTACCAGATAATCACCTGCCTTCACTTCCGGCAAGGCGCGGGTTT                                                  >  SRR4302543.6308710/1‑94 (MQ=60)

                                             CTATTGTAGTTGGATGACATTGATGCGCCATATGCCCCTGTATCATGCGGTACCAGATAATCACCTGCCTTCACTTCCGGCAAGGCGCGGGTTT                                                  >  SRR4302543.4444945/1‑94 (MQ=60)

                                             CTATTGTAGTTGGATGACATTGATGCGCCATATGCCCCTGTATCATGCGGTACCAGATAATCACCTGCCTTCACTTCCGGCAAGGCGCGGGTTT                                                  >  SRR4302543.3357516/1‑94 (MQ=60)

                                             CTATTGTAGTTGGATGACATTGATGCGCCATATGCCCCTGTATCATGCGGTACCAGATAATCACCTGCCTTCACTTCCGGCAAGGCGCGGGTTT                                                  >  SRR4302543.4256805/1‑94 (MQ=60)

                                             CTATTGTAGTTGGATGACATTGATGCGCCATATGCCCCTGTATCATGCGGTACCAGATAATCACCTGCCTTCACTTCCGGCAAGGCGCGGGTTT                                                  >  SRR4302543.4256804/1‑94 (MQ=60)

                                             CTATTGTAGTTGGATGACATTGATGCGCCATATGCCCCTGTATCATGCGGTACCAGATAATCACCTGCCTTCACTTCCGGCAAGGCGCGGGTTT                                                  <  SRR4302543.5473878/94‑1 (MQ=60)

                                             CTATTGTAGTTGGATGACATTGATGCGCCATATGCCCCTGTATCATGCGGTACCAGATAATCACCTGCCTTCACTTCCGGCAAGGCGCGGGTTT                                                  >  SRR4302543.417258/1‑94 (MQ=60)

                                              TATTGTAGTTGGATGACATTGATGCGCCATATGCCCCTGTATCATGCGGTACCAGATAATCACCTGCCTTCACTTCCGGCAAGGCGCGGGTTTC                                                 >  SRR4302543.7712103/1‑94 (MQ=60)

                                              TATTGTAGTTGGATGACATTGATGCGCCATATGCCCCTGTATCATGCGGTACCAGATAATCACCTGCCTTCACTTCCGGCAAGGCGCGGGTTTC                                                 >  SRR4302543.2385422/1‑94 (MQ=60)

                                               ATTGTAGTTGGATGACATTGATGCGCCATATGCCCCTGTATCATGCGGTACCAGATAATCACCTGCCTTCACTTCCGGCAAGGCGCGGGTTTCA                                                >  SRR4302543.174478/1‑94 (MQ=60)

                                               ATTGTAGTTGGATGACATTGATGCGCCATATGCCCCTGTATCATGCGGTACCAGATAATCACCTGCCTTCACTTCCGGCAAGGCGCGGGTTTCA                                                <  SRR4302543.6477863/94‑1 (MQ=60)

                                                TTGTAGTTGGATGACATTGATGCGCCATATGCCCCTGTATCATGCGGTACCAGATAATCACCTGCCTTCACTTCCGGCAAGGCGCGGGTTTCAA                                               >  SRR4302543.874206/1‑94 (MQ=60)

                                                 TGTAGTTGGATGACATTGATGCGCCATATGCCCCTGTATCATGCGGTACCAGATAATCACCTGCCTTCACTTCCGGCAAGGCGCGGGTTTCAAC                                              <  SRR4302543.5344499/94‑1 (MQ=60)

                                                 TGTAGTTGGATGACATTGATGCGCCATATGCCCCTGTATCATGCGGTACCAGATAATCACCTGCCTTCACTTCCGGCAAGGCGCGGGTTTCAAC                                              <  SRR4302543.7457750/94‑1 (MQ=60)

                                                  GTAGTTGGATGACATTGATGCGCCATATGCCCCTGTATCATGCGGTACCAGATAATCACCTGCCTTCACTTCCGGCAAGGCGCGGGTTTCAACA                                             >  SRR4302543.1318674/1‑94 (MQ=60)

                                                  GTAGTTGGATGACATTGATGCGCCATATGCCCCTGTATCATGCGGTACCAGATAATCACCTGCCTTCACTTCCGGCAAGGCGCGGGTTTCAACA                                             >  SRR4302543.861069/1‑94 (MQ=60)

                                                   TAGTTGGATGACATTGATGCGCCATATGCCCCTGTATCATGCGGTACCAGATAATCACCTGCCTTCACTTCCGGCAAGGCGCGGGTTTCAACAT                                            <  SRR4302543.4051859/94‑1 (MQ=60)

                                                   TAGTTGGATGACATTGATGCGCCATATGCCCCTGTATCATGCGGTACCAGATAATCACCTGCCTTCACTTCCGGCAAGGCGCGGGTTTCAACAT                                            <  SRR4302543.2566139/94‑1 (MQ=60)

                                                   TAGTTGGATGACATTGATGCGCCATATGCCCCTGTATCATGCGGTACCAGATAATCACCTGCCTTCACTTCCGGCAAGGCGCGGGTTTCAACAT                                            <  SRR4302543.8005496/94‑1 (MQ=60)

                                                    AGTTGGATGACATTGATGCGCCATATGCCCCTGTATCATGCGGTACCAGATAATCACCTGCCTTCACTTCCGGCAAGGCGCGGGTTTCAACATT                                           <  SRR4302543.2002790/94‑1 (MQ=60)

                                                    AGTTGGATGACATTGATGCGCCATATGCCCCTGTATCATGCGGTACCAGATAATCACCTGCCTTCACTTCCCGCAAGGCGCGGGTTTCAACATT                                           >  SRR4302543.2598146/1‑94 (MQ=60)

                                                     GTTGGATGACATTGATGCGCCATATGCCCCTGTATCATGCGGTACCAGATAATCCCCTGCCTTCACTTCCGGCAAGGCGCGGGTTTCAACATTT                                          <  SRR4302543.3494739/94‑1 (MQ=60)

                                                       TGGATGACATTGATGCGCCATATGCCCCTGTATCATGCGGTACCAGATAATCACCTGCCTTCACTTCCGGCAAGGCGCGGGTTTCAACATTTCC                                        >  SRR4302543.733098/1‑94 (MQ=60)

                                                       TGGATGACATTGATGCGCCATATGCCCCTGTATCATGCGGTACCAGATAATCACCTGCCTTCACTTCCGGCAAGGCGCGGGTTTCAACATTTCC                                        >  SRR4302543.5278924/1‑94 (MQ=60)

                                                       TGGATGACATTGATGCGCCATATGCCCCTGTATCATGCGGTACCAGATAATCACCTGCCTTCACTTCCGGCAAGGCGCGGGTTTCAACATTTCC                                        <  SRR4302543.1219620/94‑1 (MQ=60)

                                                       TGGATGACATTGATGCGCCATATGCCCCTGTATCATGCGGTACCAGATAATCACCTGCCTTCACTTCCGGCAAGGCGCGGGGTTCAACATTTCC                                        >  SRR4302543.5278923/1‑94 (MQ=60)

                                                        GGATGACATTGATGCGCCATATGCCCCTGTATCATGCGGTACCAGATAATCACCTGCCTTCACTTCCGGCAAGGCGCGGGTTTCAACATTTCCC                                       <  SRR4302543.1783527/94‑1 (MQ=60)

                                                         GATGACATTGATGCGCCATATGCCCCTGTATCATGCGGTACCAGATAATCACCTGCCTTCACTTCCGGCAAGGCGCGGGTTTCAACATTTCCCC                                      >  SRR4302543.2471387/1‑94 (MQ=60)

                                                         GATGACATTGATGCGCCATATGCCCCTGTATCATGCGGTACCAGATAATCACCTGCCTTCACTTCCGGCAAGGCGCGGGTTTCAACATTTCCCC                                      >  SRR4302543.1443452/1‑94 (MQ=60)

                                                         GATGACATTGATGCGCCATATGCCCCTGTATCATGCGGTACCAGATAATCACCTGCCTTCACTTCCGGCAAGGCGCGGGTTTCAACATTTCCCC                                      <  SRR4302543.2861769/94‑1 (MQ=60)

                                                          ATGACATTGATGCGCCATATGCCCCTGTATCATGCGGTACCAGATAATCACCTGCCTTCACTTCCGGCAAGGCGCGGGTTTCAACATTTCCCCC                                     <  SRR4302543.3087127/94‑1 (MQ=60)

                                                          ATGACATTGATGCGCCATATGCCCCTGTATCATGCGGTACCAGATAATCACCTGCCTTCACTTCCGGCAAGGCGCGGGTTTCAACATTTCCCCC                                     >  SRR4302543.4028996/1‑94 (MQ=60)

                                                           TGACATTGATGCGCCATATGCCCCTGTATCATGCGGTACCAGATAATCACCTGCCTTCACTTCCGGCAAGGCGCGGGTTTCAACATTTCCCCCT                                    >  SRR4302543.1084881/1‑94 (MQ=60)

                                                           TGACATTGATGCGCCATATGCCCCTGTATCATGCGGTACCAGATAATCACCTGCCTTCACTTCCGGCAAGGCGCGGGTTTCAACATTTCCCCCT                                    <  SRR4302543.7156084/94‑1 (MQ=60)

                                                           TGACATTGATGCGCCATATGCCCCTGTATCATGCGGTACCAGATAATCACCTGCCTTCACTTCCGGCAAGGCGCGGGTTTCAACATTTCCCCCT                                    >  SRR4302543.2214236/1‑94 (MQ=60)

                                                           TGACATTGATGCGCCATATGCCCCTGTATCATGCGGTACCAGATAATCACCTGCCTTCACTTCCGGCAAGGCGCGGGTTTCAACATTTCCCCCT                                    <  SRR4302543.37756/94‑1 (MQ=60)

                                                           TGACATTGATGCGCCATATGCCCCTGTATCATGCGGTACCAGATAATCACCTGCCTTCACTTCCGGCAAGGCGCGGGTTTCAACATTTCCCCCT                                    >  SRR4302543.5078690/1‑94 (MQ=60)

                                                            GACATTGATGCGCCATATGCCCCTGTATCATGCGGTACCAGATAATCACCTGCCTTCACTTCCGGCAAGGCGCGGGTTTCAACATTTCCCCCTT                                   <  SRR4302543.696189/94‑1 (MQ=60)

                                                             ACATTGATGCGCCATATGCCCCTGTATCATGCGGTACCAGATAATCACCTGCCTTCACTTCCGGCAAGGCGCGGGTTTCAACATTTCCCCCTTC                                  >  SRR4302543.5962062/1‑94 (MQ=60)

                                                             ACATTGATGCGCCATATGCCCCTGTATCATGCGGTACCAGATAATCACCTGCCTTCACTTCCGGCAAGGCGCGGGTTTCAACATTTCCCCCTTC                                  >  SRR4302543.4208878/1‑94 (MQ=60)

                                                              CATTGATGCGCCATATGCCCCTGTATCATGCGGTACCAGATAATCACCTGCCTTCACTTCCGGCAAGGCGCGGGTTTCAACATTTCCCCCTTCC                                 <  SRR4302543.2425583/94‑1 (MQ=60)

                                                               ATTGATGCGCCATATTCCCCTGTATCATGCGGTACCAGATAATCACCTGCCTTCACTTCCGGCAAGGCGCGGGTTTCAACATTTCCCCCTTCCT                                <  SRR4302543.6890286/94‑1 (MQ=60)

                                                               ATTGATGCGCCATATGCCCCTGTATCATGCGGTACCAGATAATCACCTGCCTTCACTTCCGGCAAGGCGCGGGTTTCAACATTTCCCCCTTCCT                                >  SRR4302543.952804/1‑94 (MQ=60)

                                                               ATTGATGCGCCATATGCCCCTGTATCATGCGGTACCAGATAATCACCTGCCTTCACTTCCGGCAAGGCGCGGGTTTCAACATTTCCCCCTTCCT                                <  SRR4302543.7885151/94‑1 (MQ=60)

                                                               ATTGATGCGCCATATGCCCCTGTATCATGCGGTACCAGATAATCACCTGCCTTCACTTCCGGCAAGGCGCGGGTTTCAACATTTCCCCCTTCCT                                >  SRR4302543.3675144/1‑94 (MQ=60)

                                                               ATTGATGCGCCATATGCCCCTGTATCATGCGGTACCAGATAATCACCTGCCTTCACTTCCGGCAAGGCGCGGGTTTCAACATTTCCCCCTTCCT                                >  SRR4302543.495370/1‑94 (MQ=60)

                                                               ATTGATGCGCCATATGCCCCTGTATCATGCGGTACCAGATAATCACCTGCCTTCACTTCCGGCAAGGCGCGGGTTTCAACATTTCCCCCTTCCT                                <  SRR4302543.4463871/94‑1 (MQ=60)

                                                               ATTGATGCGCCATATGCCCCTGTATCATGCGGTACCAGATAATCACCTGCCTTCACTTCCGACAAGGCGCGGGTTTCAACATTTCCCCCTTCCT                                >  SRR4302543.405468/1‑94 (MQ=60)

                                                                TTGATGCGCCATATGCCCCTGTATCATGCGGTACCAGATAATCACCTGCCTTCACTTCCGGCAAGGCGCGGGTTTCAACATTTCCCCCTTCCTG                               <  SRR4302543.1047799/94‑1 (MQ=60)

                                                                TTGATGCGCCATATGCCCCTGTATCATGCGGTACCAGATAATCACCTGCCTTCACTTCCGGCAAGGCGCGGGTTTCAACATTTCCCCCTTCCTG                               <  SRR4302543.5553609/94‑1 (MQ=60)

                                                                TTGATGCGCCATATGCCCCTGTATCATGCGGTACCAGATAATCACCTGCCTTCACTTCCGGCAAGGCGCGGGTTTCAACATTTCCCCCTTCCTG                               <  SRR4302543.6318746/94‑1 (MQ=60)

                                                                  GATGCGCCATATGCCCCTGTATCATGCGGTACCAGATAATCACCTGCCTTCACTTCCGGCAAGGCGCGGGTTTCAACATTTCCCCCTTCCTGCT                             <  SRR4302543.267082/94‑1 (MQ=60)

                                                                   ATGCGCCATATGCCCCTGTATCATGCGGTACCAGATAATCACCTGCCTTCACTTCCGGCAAGGCGCGGGTTTCAACATTTCCCCCTTCCTGCTG                            >  SRR4302543.4454893/1‑94 (MQ=60)

                                                                    TGCGCCATATGCCCCTGTATCATGCGGTACCAGATAATCACCTGCCTTCACTTCCGGCAAGGCGCGGGTTTCAACATTTCCCCCTTCCTGCTGG                           <  SRR4302543.5972309/94‑1 (MQ=60)

                                                                    TGCGCCATATGCCCCTGTATCATGCGGTACCAGATAATCACCTGCCTTCACTTCCGGCAAGGCGCGGGTTTCAACATTTCCCCCTTCCTGCTGG                           <  SRR4302543.5807247/94‑1 (MQ=60)

                                                                    TGCGCCATATGCCCCTGTATCATGCGGTACCAGATAATCACCTGCCTTCACTTCCGGCAAGGCGCGGGTTTCAACATTTCCCCCTTCCTGCTGG                           <  SRR4302543.5263535/94‑1 (MQ=60)

                                                                     GCGCCATATGCCCCTGTATCATGCGGTACCAGATAATCCCCTGCCTTCACTTCCGGCAAGGCGCGGGTTTCAACATTTCCCCCTTCCTGCTGGG                          <  SRR4302543.2664240/94‑1 (MQ=60)

                                                                      CGCCATATGCCCCTGTATCATGCGGTACCAGATAATCACCTGCCTTCACTTCCGGCAAGGCGCGGGTTTCAACATTTCCCCCTTCCTGCTGGGT                         >  SRR4302543.3741533/1‑94 (MQ=60)

                                                                      CGCCATATGCCCCTGTATCATGCGGTACCAGATAATCACCTGCCTTCACTTCCGGCAAGGCGCGGGTTTCAACATTTCCCCCTTCCTGCTGGGT                         >  SRR4302543.3741530/1‑94 (MQ=60)

                                                                       GCCATATGCCCCTGTATCATGCGGTACCAGATAATCACCTGCCTTCACTTCCGGCAAGGCGCGGGTTTCAACATTTCCCCCTTCCTGCTGGGTA                        >  SRR4302543.1804016/1‑94 (MQ=60)

                                                                        CCATATGCCCCTGTATCATGCGGTACCAGATAATCACCTGCCTTCACTTCCGGCAAGGCGCGGGTTTCAACATTTCCCCCTTCCTGCTGGGTAA                       >  SRR4302543.5126424/1‑94 (MQ=60)

                                                                         CATATGCCCCTGTATCATGCGGTACCAGATAATCACCTGCCTTCACTTCCGGCAAGGCGCGGGTTTCAACATTTCCCCCTTCCTGCTGGGTAAA                      >  SRR4302543.6740554/1‑94 (MQ=60)

                                                                          ATATGCCCCTGTATCATGCGGTACCAGATAATCACCTGCCTTCACTTCCGGCAAGGCGCGGGTTTCAACATTTCCCCCTTCCTGCTGGGTAAAG                     <  SRR4302543.2712162/94‑1 (MQ=60)

                                                                           TATGCCCCTGTATCATGCGGTACCAGATAATCACCTGCCTTCACTTCCGGCAAGGCGCGGGTTTCAACATTTCCCCCTTCCTGCTGGGTAAAGA                    <  SRR4302543.262709/94‑1 (MQ=60)

                                                                           TATGCCCCTGTATCATGCGGTACCAGATAATCACCTGCCTTCACTTCCGGCAAGGCGCGGGTTTCAACATTTCCCCCTTCCTGCTGGGTAAAGA                    >  SRR4302543.2438899/1‑94 (MQ=60)

                                                                            ATGCCCCTGTATCATGCGGTACCAGATAATCACCTGCCTTCACTTCCGGCAAGGCGCGGGTTTCAACATTTCCCCCTTCCTGCTGGGTAAAGAC                   >  SRR4302543.950028/1‑94 (MQ=60)

                                                                            ATGCCCCTGTATCATGCGGTACCAGATAATCACCTGCCTTCACTTCCGGCAAGGCGCGGGTTTCAACATTTCCCCCTTCCTGCTGGGTAAAGAC                   <  SRR4302543.7781738/94‑1 (MQ=60)

                                                                             TGCCCCTGTATCATGCGGTACCAGATAATCACCTGCCTTCACTTCCGGCAAGGCGCGGGTTTCAACATTTCCCCCTTCCTGCTGGGTAAAGACA                  <  SRR4302543.1953174/94‑1 (MQ=60)

                                                                               CCCCTGTATCATGCGGTACCAGATAATCACCTGCCTTCACTTCCGGCAAGGCGCGGGTTTCAACATTTCCCCCTTCCTGCTGGGTAAAGACATC                >  SRR4302543.2779179/1‑94 (MQ=60)

                                                                                CCCTGTATCATGCGGTACCAGATAATCGCCTGCCTTCACTTCCGGCAAGGCGCGGGTTTCAACATTTCCCCCTTCCTGCTGGGTAAAGACATCG               <  SRR4302543.1430130/94‑1 (MQ=60)

                                                                                CCCTGTATCATGCGGTACCAGATAATCACCTGCCTTCACTTCCGGCAAGGCGCGGGTTTCAACATTTCCCCCTTCCTGCTGGGTAAAGACATCG               <  SRR4302543.2543032/94‑1 (MQ=60)

                                                                                CCCTGTATCATGCGGTACCAGATAATCACCTGCCTTCACTTCCGGCAAGGCGCGGGTTTCAACATTTCCCCCTTCCTGCTGGGTAAAGACATCG               >  SRR4302543.5064140/1‑94 (MQ=60)

                                                                                CCCTGTATCATGCGGTACCAGATAATCACCTGCCTTCACTTCCGGCAAGGCGCGGGTTTCAACATTTCCCCCTTCCTGCTGGGTAAAGACATCG               <  SRR4302543.4748802/94‑1 (MQ=60)

                                                                                CCCTGTATCATGCGGTACCAGATAATCACCTGCCTTCACTTCCGGCAAGGCGCGGGTTTCAACATTTCCCCCTTCCTGCTGGGTAAAGACATCG               >  SRR4302543.4153977/1‑94 (MQ=60)

                                                                                 CCTGTATCATGCGGTACCAGATAATCACCTGCCTTCACTTCCGGCAAGGCGCGGGTTTCAACATTTCCCCCTTCCTGCTGGGTAAAGACATCGC              >  SRR4302543.7619539/1‑94 (MQ=60)

                                                                                 CCTGTATCATGCGGTACCAGATAATCACCTGCCTTCACTTCCGGCAAGGCGCGGGTTTCAACATTTCCCCCTTCCTGCTGGGTAAAGACATCGC              >  SRR4302543.4996153/1‑94 (MQ=60)

                                                                                 CCTGTATCATGCGGTACCAGATAATCACCTGCCTTCACTTCCGGCAAGGCGCGGGTTTCAACATTTCCCCCTTCCTGCTGGGTAAAGACATCGC              >  SRR4302543.2423262/1‑94 (MQ=60)

                                                                                  CTGTATCATGCGGTACCAGATAATCACCTGCCTTCACTTCCGGCAAGGCGCGGGTTTCAACATTTCCCCCTTCCTGCTGGGTAAAGACATCGCC             >  SRR4302543.6424655/1‑94 (MQ=60)

                                                                                   TGTATCATGCGGTACCAGATAATCACCTGCCTTCACTTCCGGCAAGGCGCGGGTTTCAACATTTCCCCCTTCCTGCTGGGTAAAGACATCGCCC            >  SRR4302543.480707/1‑94 (MQ=60)

                                                                                   TGTATCATGCGGTACCAGATAATCACCTGCCTTCACTTCCGGCAAGGCGCGGGTTTCAACATTTCCCCCTTCCTGCTGGGTAAAGACATCGCCC            <  SRR4302543.1293461/94‑1 (MQ=60)

                                                                                    GTATCATGCGGTACCAGATAATCACCTGCCTTCACTTCCGGCAAGGCGCGGGTTTCAACATTTCCCCCTTCCTGCTGGGTAAAGACATCGCCCG           <  SRR4302543.2345531/94‑1 (MQ=60)

                                                                                    GTATCATGCGGTACCAGATAATCACCTGCCTTCACTTCCGGCAAGGCGCGGGTTTCAACATTTCCCCCTTCCTGCTGGGTAAAGACATCGCCCG           <  SRR4302543.755054/94‑1 (MQ=60)

                                                                                    GTATCATGCGGTACCAGATAATCACCTGCCTTCACTTCCGGCAAGGCGCGGGTTTCAACATTTCCCCCTTCCTGCTGGGTAAAGACATCGCCCG           <  SRR4302543.1946567/94‑1 (MQ=60)

                                                                                     TATCATGCGGTACCAGATAATCACCTGCCTTCACTTCCGGCAAGGCGCGGGTTTCAACATTTACCCCTTCCTGCTGGGTCAAGACATCGACCGA          >  SRR4302543.4322976/1‑94 (MQ=60)

                                                                                       TCATGCGGTACCAGATACTCACCTGCCTTCACTTCCGGCAAGGCGCGGGTTTCAACATTTCCCCCTTCCTGCTGGGTAAAGACATCGCCCGATT        <  SRR4302543.7115574/94‑1 (MQ=60)

                                                                                       TCATGCGGTACCAGATAATCACCTGCCTTCACTTCCGGCAAGGCGCGGGTTTCAACATTTCCCCCTTCCTGCTGGGTAAAGACATCGCCCGATT        >  SRR4302543.7771646/1‑94 (MQ=60)

                                                                                        CATGCGGTACCAGATAATCACCTGCCTTCACTTCCGGCAAGGCGCGGGTTTCAACATTTCCCCCTTCCTGCTGGGTAAAGACATCGCCCGATTC       >  SRR4302543.1237189/1‑94 (MQ=60)

                                                                                        CATGCGGTACCAGATAATCACCTGCCTTCACTTCCGGCAAGGCGCGGGTTTCAACATTTCCCCCTTCCTGCTGGGTAAAGACATCGCCCGATTC       >  SRR4302543.1237188/1‑94 (MQ=60)

                                                                                         ATGCGGTACCAGATAATCACCTGCCTTCACTTCCGGCAAGGCGCGGGTTTCAACATTTCCCCCTTCCTGCTGGGTAAAGACATCGCCCGATTCA      >  SRR4302543.7596340/1‑94 (MQ=60)

                                                                                         ATGCGGTACCAGATAATCACCTGCCTTCACTTCCGGCAAGGCGCGGGTTTCAACATTTCCCCCTTCCTGCTGGGTAAAGACATCGCCCGATTCA      <  SRR4302543.7460744/94‑1 (MQ=60)

                                                                                         ATGCGGTACCAGATAATCACCTGCCTTCACTTCCGGCAAGGCGCGGGTTTCAACATTTCCCCCTTCCTGCTGGGTAAAGACATCGCCCGATTCA      <  SRR4302543.1149184/94‑1 (MQ=60)

                                                                                           GCGGTACCAGATAATCACCTGCCTTCACTTCCGGCAAGGCGCGGGTTTCAACATTTCCCCCTTCCTGCTGGGTAAAGACATCGCCCGATTCACA    >  SRR4302543.7690550/1‑94 (MQ=60)

                                                                                            CGGTACCAGATAATCACCTGCCTTCACTTCCGGCAAGGCGCGGGTTTCAACATTTCCCCCTTCCTGCTGGGTAAAGACATCGCCCGATTCACAT   <  SRR4302543.7777628/94‑1 (MQ=60)

                                                                                            CGGTACCAGATAATCACCTGCCTTCACTTCCGGCAAGGCGCGGGTTTCAACATTTCCCCCTTCCTGCTGGGTAAAGACATCGCCCGATTCACAT   <  SRR4302543.2067043/94‑1 (MQ=60)

                                                                                             GGTACCAGATAATCACCTGCCTTCACTTCCGGCAAGGCGCGGGTTTCAACATTTCCCCCTTCCTGCTGGGTAAAGACATCGCCCGATTCACATA  <  SRR4302543.5801476/94‑1 (MQ=60)

CGCGCCTGACCATTATCAAACAGAACTTCTGGTAACAGCGGACGGCTATTGTAGTTGGATGACATTGATGCGCCATATGCCCCTGTATCATGCAGTACCAGATAATCACCTGCCTTCACTTCCGGCAAGGCGCGGGTTTCAACATTTCCCCCTTCCTGCTGGGTAAAGACATCGCCCGATTCACATA  >  NC_000913/2975714‑2975900

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 0 ≤` `ATCG/ATCG` `< 11 ≤` `ATCG/ATCG` `< 28 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`