Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A1 F1 I1 R1 1696 279.3 15874187 97.8% 15524954 93.0

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 2,977,219 T→C H59H (CAT→CAC)  lysR → LysR

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009132,977,2190TC99.3% 934.2 / ‑3.0 296H59H (CAT→CAC) lysRLysR
Reads supporting (aligned to +/- strand):  ref base T (2/0);  new base C (135/159);  total (137/159)
Fisher's exact test for biased strand distribution p-value = 2.13e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 7.56e-02

Only 100 of 305 total aligned reads displayed.

CACCTCACAGCCAACCGTCAGCCGCGAACTTGCGCGCTTTGAGAAGGTGATCGGGCTGAAATTGTTTGAGCGCGTACGTGGGCGATTACATCCTACCGTGCAAGGACTGCGTCTGTTTGAAGAAGTGCAACGATCCTGGTACGGACTGGATCGCATTGTCAGCGCCGCAGAAAGTCTGC  >  NC_000913/2977129‑2977307
                                                                                          |                                                                                        
cacCTCACAGCCAACCGTCAGCCGCGAACTTGCGCGCTTTGAGAAGGTGATCGGGCTGAAATTGTTTGAGCGCGTACGTGGGCGATTACAccc                                                                                        >  2:2267857/1‑93 (MQ=255)
cacCTCACAGCCAACCGTCAGCCGCGAACTTGCGCGCTTTGAGAAGGTGATCGGGCTGAAATTGTTTGAGCGCGTACGTGGGCGATTACAccc                                                                                        <  1:815419/93‑1 (MQ=255)
cacCTCACAGCCAACCGTCAGCCGCGAACTTGCGCGCTTTGAGAAGGTGATCGGGCTGAAATTGTTTGAGCGCGTACGTGGGCGATTACAccc                                                                                        <  2:4249728/93‑1 (MQ=255)
cacCTCACAGCCAACCGTCAGCCGCGAACTTGCGCGCTTTGAGAAGGTGATCGGGCTGAAATTGTTTGAGCGCGTACGTGGGCGATTACAccc                                                                                        <  1:6797906/93‑1 (MQ=255)
  ccTCACAGCCAACCGTCAGCCGCGAACTTGCGCGCTTTGAGAAGGTGATCGGGCTGAAATTGTTTGAGCGCGTACGTGGGCGATTACACCCTa                                                                                      >  2:2918529/1‑93 (MQ=255)
   cTCACAGCCAACCGTCAGCCGCGAACTTGCGCGCTTTGAGAAGGTGATCGGGCTGAAATTGTTTGAGCGCGTACGTGGGCGATTACACCCTAc                                                                                     <  2:2061095/93‑1 (MQ=255)
   cTCACAGCCAACCGTCAGCCGCGAACTTGCGCGCTTTGAGAAGGTGATCGGGCTGAAATTGTTTGAGCGCGTACGTGGGCGATTACACCCTAc                                                                                     <  2:5512368/93‑1 (MQ=255)
    tCACAGCCAACCGTCAGCCGCGAACTTGCGCGCTTTGAGAAGGTGATCGGGCTGAAATTGTTTGAGCGCGTACGTGGGCGATTACACCCTAcc                                                                                    <  2:7360117/93‑1 (MQ=255)
    tCACAGCCAACCGTCAGCCGCGAACTTGCGCGCTTTGAGAAGGTGATCGGGCTGAAATTGTTTGAGCGCGTACGTGGGCGATTACACCCTAcc                                                                                    >  1:2832744/1‑93 (MQ=255)
        aGCCAACCGTCAGCCGCGAACTTGCGCGCTTTGAGAAGGTGATCGGGCTGAAATTGTTTGAGCGCGTACGTGGGCGATTACACCCTACCGTGc                                                                                >  2:3764350/1‑93 (MQ=255)
         gCCAACCGTCAGCCGCGAACTTGCGCACTTTGAGAAGGTGATCGGGCTGAAATTGTTTGAGCGCGTACGTGGGCGATTACACCCTACCGTGCa                                                                               >  1:3020488/1‑93 (MQ=255)
          ccAACCGTCAGCCGCGAACTTGCGCGCTTTGAGAAGGTGATCGGGCTGAAATTGTTTGAGCGCGTACGTGGGCGATTACACCCTACCGTGCaa                                                                              <  2:530455/93‑1 (MQ=255)
           cAACCGTCAGCCGCGAACTTGCGCGCTTTGAGAAGGTGATCGGGCTGAAATTGTTTGAGCGCGTACGTGGGCGATTACACCCTACCGTGCAAg                                                                             <  1:6556507/93‑1 (MQ=255)
             aCCGTCAGCCGCGAACTTGCGCGCTTTGAGAAGGTGATCGGGCTGAAATTGTTTGAGCGCGTACGTGGGCGATTACACCCTACCGTGCAAggc                                                                           >  1:1682418/1‑92 (MQ=255)
             aCCGTCAGCCGCGAACTTGCGCGCTTTGAGAAGGTGATCGGGCTGAAATTGTTTGAGCGCGTACGTGGGCGATTACACCCTACCGTGCAAGGa                                                                           <  1:5797581/93‑1 (MQ=255)
              ccGTCAGCCGCGAACTTGCGCGCTTTGAGAAGGTGATCGGGCTGAAATTGTTTGAGCGCGTACGTGGGCGATTACACCCTACCGTGCAAGGAc                                                                          <  1:7565168/93‑1 (MQ=255)
              ccGTCAGCCGCGAACTTGCGCGCTTTGAGAAGGTGATCGGGCTGAAATTGTTTGAGCGCGTACGTGGGCGATTACACCCTACCGTGCAAGGAc                                                                          <  2:3406201/93‑1 (MQ=255)
                 tCAGCCGCGAACTTGCGCGCTTTGAGAAGGTGATCGGGCTGAAATTGTTTGAGCGCGTACGTGGGCGATTACACCCTACCGTGCAAGGACTGc                                                                       <  2:7299651/93‑1 (MQ=255)
                    gCCGCGAACTTGCGCGCTTTGAGAAGGTGATCGGGCTGAAATTGTTTGAGCGCGTACGTGGGCGATTACACCCTACCGTGCAAGGACTGCGTc                                                                    <  1:2482978/93‑1 (MQ=255)
                     ccGCGAACTTGCGCGCTTTGAGAAGGTGATCGGGCTGAAATTGTTTGAGCGCGTACGTGGGCGATTACACCCTACCGTGCAAGGACTGCGTCt                                                                   <  1:2711895/93‑1 (MQ=255)
                       gcgAACTTGCGCGCTTTGAGAAGGTGATCGGGCTGAAATTGTTTGAGCGCGTACGTGGGCGATTACACCCTACCGTGCAAGGACTGCGTCTGt                                                                 >  2:7195556/1‑93 (MQ=255)
                       ccgAACTTGCGCGCTTTGAGAAGGTGATCAGGCTGAAATTGTTTGAGCGCGTACGTGGGCGATTACACCCTACCGTGCAAGGACTGCGTCTGt                                                                 <  2:1886938/92‑1 (MQ=255)
                        cgAACTTGCGCGCTTTGAGAAGGTGATCGGGCTGAAATTGTTTGAGCGCGTACGTGGGCGATTACACCCTACCGTGCAAGGACTGCGTCTGtt                                                                <  2:1511545/93‑1 (MQ=255)
                          aaCTTGCGCGCTTTGAGAAGGTGATCGGGCTGAAATTGTTTGAGCGCGTACGTGGGCGATTACACCCTACCGTGCAAGGACTGCGTCTGTTTg                                                              <  1:3901530/93‑1 (MQ=255)
                             ttGCGCGCTTTGAGAAGGTGATCGGGCTGAAATTGTTTGAGCGCGTACGTGGGCGATTACACCCTACCGTGCAAGGACTGCGTCTGTTTgaag                                                           <  2:4108589/93‑1 (MQ=255)
                              tGCGCGCTTTGAGAAGGTGATCGGGCTGAAATTGTTTGAGCGCGTACGTGGGCGATTACACCCTACCGTGCAAGGACTGCGTCTGTTTgaaga                                                          <  1:3750271/93‑1 (MQ=255)
                               gcgcgcTTTGAGAATGTGATCGGGCTGAAATTGTTTGAGCGCGTACGTGGGCGATTACACCCTACCGTGCAAGGACTGCGTCTGTTTgaagaa                                                         <  2:5974037/93‑1 (MQ=255)
                               gcgcgcTTTGAGAAGGTGATCGGGCTGAAATTGTTTGAGCGCGTACGTGGGCGATTACACCCTACCGTGCAAGGACTGCGTCTGTTTgaagaa                                                         <  2:4568037/93‑1 (MQ=255)
                                cgcgcTTTGAGAAGGTGATCGGGCTGAAATTGTTTGAGCGCGTACGTGGGCGATTACACCCTACCGTGCAAGGACTGCGTCTGTTTGaagaag                                                        <  2:249240/93‑1 (MQ=255)
                                 gcgcTTTGAGAAGGTGATCGGGCTGAAATTGTTTGAGCGCGTACGTGGGCGATTACACCCTACCGTGCAAGGACTGCGTCTGTTTGAAGAAGt                                                       >  2:3020038/1‑93 (MQ=255)
                                  cgcTTTGAGAAGGTGATCGGGCTGAAATTGTTTGAGCGCGTACGTGGGCGATTACACCCTACCGTGCAAGGACTGCGTCTGTTTGAAGAAGTg                                                      <  1:6222128/93‑1 (MQ=255)
                                   gcTTTGAGAAGGTGATCGGGCTGAAATTGTTTGAGCGCGTACGTGGGCGATTACACCCTACCGTGCAAGGACTGCGTCTGTTTGAAGAAGTGc                                                     >  1:7813235/1‑93 (MQ=255)
                                   gcTTTGAGAAGGTGATCGGGCTGAAATTGTTTGAGCGCGTACGTGGGCGATTACACCCTACCGTGCAAGGACTGCGTCTGTTTGAAGAAGTGc                                                     >  2:1099273/1‑93 (MQ=255)
                                     tttGAGAAGGTGATCGGGCTGAAATTGTTTGAGCGCGTACGTGGGCGATTACACCCTACCGTGCAAGGACTGCGTCTGTTTGAAGAAGTGCaa                                                   >  1:901295/1‑93 (MQ=255)
                                     tttGAGAAGGTGATCGGGCTGAAATTGTTTGAGCGCGTACGTGGGCGATTACACCCTACCGTGCAAGGACTGCGTCTGTTTGAAGAAGTGCaa                                                   <  2:5425067/93‑1 (MQ=255)
                                     tttGAGAAGGTGATCGGGCTGAAATTGTTTGAGCGCGTACGTGGGCGATTACACCCTACCGTGCAAGGACTGCGTCTGTTTGAAGAAGTGCaa                                                   <  2:3966237/93‑1 (MQ=255)
                                      ttGAGAAGGTGATCGGGCTGAAATTGTTTGAGCGCGTACGTGGGCGATTACACCCTACCGTGCAAGGACTGCGTCTGTTTGAAGAAGTGCAAc                                                  <  1:1830755/93‑1 (MQ=255)
                                      ttGAGAAGGTGATCGGGCTGAAATTGTTTGAGCGCGTACGTGGGCGATTACACCCTACCGTGCAAGGACTGCGTCTGTTTGAAGAAGTGCAAc                                                  <  1:3333269/93‑1 (MQ=255)
                                       tGAGAAGGTGATCGGGCTGAAATTGTTTGAGCGCGTACGTGGGCGATTACACCCTACCGTGCAAGGACTGCGTCTGTTTGAAGAAGTGCAACg                                                 >  2:6951931/1‑93 (MQ=255)
                                        gagaAGGTGATCGGGCTGAAATTGTTTGAGCGCGTACGTGGGCGATTACACCCTACCGTGCAAGGACTGCGTCTGTTTGAAGAAGTGCAACGa                                                >  2:4634902/1‑93 (MQ=255)
                                        gagaAGGTGATCGGGCTGAAATTGTTTGAGCGCGTACGTGGGCGATTACACCCTACCGTGCAAGGACTGCGTCTGTTTGAAGAAGTGCAACGa                                                <  1:4142103/93‑1 (MQ=255)
                                         agaAGGTGATCGGGCTGAAATTGTTTGAGCGCGTACGTGGGCGATTACACCCTACCGTGCAAGGACTGCGTCTGTTTGAAGAAGTGCAACGAt                                               <  1:5432020/93‑1 (MQ=255)
                                         agaAGGTGATCGGGCTGAAATTGTTTGAGCGCGTACGTGGGCGATTACACCCTACCGTGCAAGGACTGCGTCTGTTTGAAGAAGTGCAACGAt                                               <  1:1458654/93‑1 (MQ=255)
                                           aaGGTGATCGGGCTGAAATTGTTTGAGCGCGTACGTGGGCGATTACACCCTACCGTGCAAGGACTGCGTCTGTTTGAAGAAGTGCAACGATcc                                             <  1:2291090/93‑1 (MQ=255)
                                             ggTGATCGGGCTGAAATTGTTTGAGCGCGTACGTGGGCGATTACACCCTACCGTGCAAGGACTGCGTCTGTTTGAAGAAGTGCAACGATCCTg                                           <  1:4583427/93‑1 (MQ=255)
                                             ggTGATCGGGCTGAAATTGTTTGAGCGCGTACGTGGGCGATTACACCCTACCGTGCAAGGACTGCGTCTGTTTGAAGAAGTGCAACGATCCTg                                           <  1:3290855/93‑1 (MQ=255)
                                             ggTGATCGGGCTGAAATTGTTTGAGCGCGTACGTGGGCGATTACACCCTACCGTGCAAGGACTGCGTCTGTTTGAAGAAGTGCAACGATCCTg                                           <  2:2375725/93‑1 (MQ=255)
                                             ggTGATCGGGCTGAAATTGTTTGAGCGCGTACGTGGGCGATTACACCCTACCGTGCAAGGACTGCGTCTGTTTGAAGAAGTGCAACGATCCTg                                           <  1:6324250/93‑1 (MQ=255)
                                              gTGATCGGGCTGAAATTGTTTGAGCGCGTACGTGGGCGATTACACCCTACCGTGCAAGGACTGCGTCTGTTTGAAGAAGTGCAACGATCCTgg                                          <  1:4510088/93‑1 (MQ=255)
                                                gATCGGGCTGAAATTGTTTGAGCGCGTACGTGGGCGATTACACCCTACCGTGCAAGGACTGCGTCTGTTTGAAGAAGTGCAACGATCCTGGTa                                        <  1:3808271/93‑1 (MQ=255)
                                                gATCGGGCTGAAATTGTTTGAGCGCGTACGTGGGCGATTACACCCTACCGTGCAAGGACTGCGTCTGTTTGAAGAAGTGCAACGATCCTGGTa                                        >  1:5375864/1‑93 (MQ=255)
                                                gATCGGGCTGAAATTGTTTGAGCGCGTACGTGGGCGATTACACCCTACCGTGCAAGGACTGCGTCTGTTTGAAGAAGTGCAACGATACTGGTa                                        <  2:7679380/93‑1 (MQ=255)
                                                  tCGGGCTGAAATTGTTTGAGCGCGTACGTGGGCGATTACACCCTACCGTGCAAGGACTGCGTCTGTTTGAAGAAGTGCAACGATCCTGGTACg                                      <  2:3520079/93‑1 (MQ=255)
                                                  tCGGGCTGAAATTGTTTGAGCGCGTACGTGGGCGATTACACCCTACCGTGCAAGGACTGCGTCTGTTTGAAGAAGTGCAACGATCCTGGTACg                                      >  1:3208287/1‑93 (MQ=255)
                                                   cGGGCTGAAATTGTTTGAGCGCGTACGTGGGCGATTACACCCTACCGTGCAAGGACTGCGTCTGTTTGAAGAAGTGCAACGATCCTGGTACgg                                     <  1:138474/93‑1 (MQ=255)
                                                    gggCTGAAATTGTTTGAGCGCGTACGTGGGCGATTACACCCTACCGTGCAAGGACTGCGTCTGTTTGAAGAAGTGCAACGATCCTGGTACGGa                                    >  1:7208909/1‑93 (MQ=255)
                                                    gggCTGAAATTGTTTGAGCGCGTACGTGAGCGATTACACCCTACCGTGCAAGGACTGCGTCTGTTTGAAGAAGTGCAACGATCCTGGTACggt                                    <  1:7045439/93‑2 (MQ=255)
                                                      gCTGAAATTGTTTGAGCGCGTACGTGGGCGATTACACCCTACCGTGCAAGGGCTGCGTCTGTTTGAAGAAGTGCAAAGATACTGGTAGGGACt                                  >  1:2941231/1‑93 (MQ=255)
                                                       cTGAAATTGTTTGAGCGCGTACGTGGGCGATTACACCCTACCGTGCAAGGACTGCGTCTGTTTGAAGAAGTGCAACGATCCTGGTACGGACTg                                 <  1:1542646/93‑1 (MQ=255)
                                                         gAAATTGTTTGAGCGCGTACGTGGGCGATTACACCCTACCGTGCAAGGACTGCGTCTGTTTGAAGAAGTGCAACGATCCTGGTACGGACTGGa                               >  1:1969286/1‑93 (MQ=255)
                                                         gAAATTGTTTGAGCGCGTACGTGGGCGATTACACCCTACCGTGCAAGGACTGCGTCTGTTTGAAGAAGTGCAACGATCCTGGTACGGACTGGa                               >  2:6510994/1‑93 (MQ=255)
                                                          aaaTTGTTTGAGCGCGTACGTGGGCGATTACACCCTACCGTGCAAGGACTGCGTCTGTTTGAAGAAGTGCAACGATCCTGGTACGGACTGGAt                              <  2:5601962/93‑1 (MQ=255)
                                                          aaaTTGTTTGAGCGCGTACGTGGGCGATTACACCCTACCGTGCAAGGACTGCGTCTGTTTGAAGAAGTGCAACGATCCTGGTACGGACTGGAt                              <  1:5833954/93‑1 (MQ=255)
                                                           aaTTGTTTGAGCGCGTACGTGGGCGATTACACCCTACCGTGCAAGGACTGCGTCTGTTTGAAGAAGTGCAACGATCCTGGTACGGACTGGATc                             <  1:617941/93‑1 (MQ=255)
                                                           aaTTGTTTGAGCGCGTACGTGGGCGATTACACCCTACCGTGCAAGGACTGCGTCTGTTTGAAGAAGTGCAACGATCCTGGTACGGACTGGATc                             >  1:7246429/1‑93 (MQ=255)
                                                            aTTGTTTGAGCGCGTACGTGGGCGATTACACCCTACCGTGCAAGGACTGCGTCTGTTTGAAGAAGTGCAACGATCCTGGTACGGACTGGATCg                            >  2:5749895/1‑93 (MQ=255)
                                                             ttGTTTGAGCGCGTACGTGGGCGATTACACCCTACCGTGCAAGGACTGCGTCTGTTTGAAGAAGTGCAACGATCCTGGTACGGACTGGATCGc                           >  2:1337359/1‑93 (MQ=255)
                                                             ttGTTTGAGCGCGTACGTGGGCGATTACACCCTACCGTGCAAGGACTGCGTCTGTTTGAAGAAGTGCAACGATCCTGGTACGGACTGGATCGc                           >  2:5817335/1‑93 (MQ=255)
                                                             ttGTTTGAGCGCGTACGTGGGCGATTACACCCTACCGTGCAAGGACTGCGTCTGTTTGAAGAAGTGCAACGATCCTGGTACGGACTGGATCGc                           >  1:4391285/1‑93 (MQ=255)
                                                             ttGTTTGAGCGCGTACGTGGGCGATTACACCCTACCGTGCAAGGACTGCGTCTGTTTGAAGAAGTGCAACGATCCTGGTACGGACTGGATCGc                           <  2:7479390/93‑1 (MQ=255)
                                                             atGTTTGGGCGCGTTCGGGGGCGATTACCCCCCACCGTGCAAGGACTGGGTCTGTTTGAAAAAGTGCAACGATCCTGGTACGGACTGGATCGc                           <  2:4986271/92‑1 (MQ=255)
                                                               gTTTGAGCGCGTACGTGGGCGATTACACCCTACCGTGCAAGGACTGCGTCTGTTTGAAGAAGTGCAACGATCCTGGTACGGACTGGATCGCAt                         >  2:1051107/1‑93 (MQ=255)
                                                               gTTTGAGCGCGTACGTGGGCGATTACACCCTACCGTGCAAGGACTGCGTCTGTTTGAAGAAGTGCAACGATCCTGGTACGGACTGGATCGCAt                         >  1:747586/1‑93 (MQ=255)
                                                               gTTTGAGCGCGTACGTGGGCGATTACACCCTACCGTGCAAGGACTGCGTCTGTTTGAAGAAGTGCAACGATCCTGGTACGGACTGGATCGCAt                         >  2:7749669/1‑93 (MQ=255)
                                                                tttGAGCGCGTACGTGGGCGATTACACCCTACCGTGCAAGGACTGCGTCTGTTTGAAGAAGTGCAACGATCCTGGTACGGACTGGATCGCAtt                        >  2:7861837/1‑93 (MQ=255)
                                                                tttGAGCGCGTACGTGGGCGATTACACCCTACCGTGCAAGGACTGCGTCTGTTTGAAGAAGTGCAACGATCCTGGTACGGACTGGATCGCAtt                        >  1:1919872/1‑93 (MQ=255)
                                                                  tGAGCGCGTACGTGGGCGATTACACCCTACCGTGCAAGGACTGCGTCTGTTTGAAGAAGTGCAACGATCCTGGTACGGACTGGATCGCATTGt                      <  1:1074310/93‑1 (MQ=255)
                                                                    aGCGCGTACGTGGGCGATTACACCCTACCGTGCAAGGACTGCGTCTGTTTGAAGAAGTGCAACGATCCTGGTACGGACTGGATCGCATTGTCa                    >  1:5202944/1‑93 (MQ=255)
                                                                     gcgcGTACGTGGGCGATTACACCCTACCGTGCAAGGACTGCGTCTGTTTGAAGAAGTGCAACGATCCTGGTACGGACTGGATCGCATTGTCAg                   <  2:2680993/93‑1 (MQ=255)
                                                                     gcgcGTACGTGGGCGATTACACCCTACCGTGCAAGGACTGCGTCTGTTTGAAGAAGTGCAACGATCCTGGTACGGACTGGATCGCATTGTCAg                   >  2:6741305/1‑93 (MQ=255)
                                                                         gTACGTGGGCGATTACACCCTACCGTGCAAGGACTGCGTCTGTTTGAAGAAGTGCAACGATCCTGGTACGGACTGGATCGCATTGTCAGcgcc               >  2:7066794/1‑93 (MQ=255)
                                                                         gTACGTGGGCGATTACACCCTACCGTGCAAGGACTGCGTCTGTTTGAAGAAGTGCAACGATCCTGGTACGGACTGGATCGCATTGTCAGcgcc               >  1:499309/1‑93 (MQ=255)
                                                                         gTACGTGGGCGATTACACCCTACCGTGCAAGGACTGCGTCTGTTTGAAGAAGTGCAACGATCCTGGTACGGACTGGATCGCATTGTCAGcgcc               >  1:4833902/1‑93 (MQ=255)
                                                                          tACGTGGGCGATTACACCCTACCGTGCAAGGACTGCGTCTGTTTGAAGAAGTGCAACGATCCTGGTACGGACTGGATCGCATTGTCAGcgccg              >  2:3280231/1‑93 (MQ=255)
                                                                           tcgggggCGATTACACCCTACCGTGCAAGGACTGCGTCTGTTTGAAGAAGTGCAACGATCCTGGTACGGACTGGATCGCATTGTCAGcgccgc             <  1:7446127/89‑1 (MQ=255)
                                                                            cGTGGGCGATTACACCCTACCGTGCAAGGACTGCGTCTGTTTGAAGAAGTGCAACGATCCTGGTACGGACTGGATCGCATTGTCAGCGCCGCa            <  2:4876111/93‑1 (MQ=255)
                                                                             gTGGGCGATTACACCCTACCGTGCAAGGACTGCGTCTGTTTGAAGAAGTGCAACGATCCTGGTACGGACTGGATCGCATTGTCAGCGCCGCAg           >  1:958781/1‑93 (MQ=255)
                                                                              tGGGCGATTACACCCTACCGTGCAAGGACTGCGTCTGTTTGAAGAAGTGCAACGATCCTGGTACGGACTGGATCGCATTGTCAGCGCCGCAGa          >  1:2038306/1‑93 (MQ=255)
                                                                              tGGGCGATTACACCCTACCGTGCAAGGACTGCGTCTGTTTGAAGAAGTGCAACGATCCTGGTACGGACTGGATCGCATTGTCAGCGCCGCAGa          <  1:1041203/93‑1 (MQ=255)
                                                                               gggCGATTACACCCTACCGTGCAAGGACTGCGTCTGTTTGAAGAAGTGCAACGATCCTGGTACGGACTGGATCGCATTGTCAGCGCCGCAGaa         <  2:1970073/93‑1 (MQ=255)
                                                                                ggCGATTACACCCTACCGTGCAAGGACTGCGTCTGTTTGAAGAAGTGCAACGATCCTGGTACGGACTGGATCGCATTGTCAGCGCCGCAGaaa        >  1:40595/1‑93 (MQ=255)
                                                                                ggCGATTACACCCTACCGTGCAAGGACTGCGTCTGTTTGAAGAAGTGCAACGATCCTGGTACGGACTGGATCGCATTGTCAGCGCCGCAGaaa        <  1:4714254/93‑1 (MQ=255)
                                                                                ggCGATTACACCCTACCGTGCAAGGACTGCGTCTGTTTGAAGAAGTGCAACGATCCTGGTACGGACTGGATCGCATTGTCAGCGCCGCAGaaa        <  2:297370/93‑1 (MQ=255)
                                                                                 gCGATTACACCCTACCGTGCAAGGACTGCGTCTGTTTGAAGAAGTGCAACGATCCTGGTACGGACTGGATCGCATTGTCAGCGCCGCAGAAAg       <  1:6661838/93‑1 (MQ=255)
                                                                                  cGATTACACCCTACCGTGCAAGGACTGCGTCTGTTTGAAGAAGTGCAACGATCCTGGTACGGACTGGATCGCATTGTCAGCGCCGCAGAAAGt      <  2:1695206/93‑1 (MQ=255)
                                                                                   gATTACACCCTACCGTGCAAGGACTGCGTCTGTTTGAAGAAGTGCAACGATCCTGGTACGGACTGGATCGCATTGTCAGCGCCGCAGAAAGTc     <  1:6863930/93‑1 (MQ=255)
                                                                                    aTTACACCCTACCGTGCAAGGACTGCGTCTGTTTGAAGAAGTGCAACGATCCTGGTACGGACTGGATCGCATTGTCAGCGCCGCAGAAAGTCt    >  1:5985651/1‑93 (MQ=255)
                                                                                     ttACACCCTACCGTGCAAGGACTGCGTCTGTTTGAAGAAGTGCAACGATCCTGGTACGGACTGGATCGCATTGTCAGGGCCGCAGAAAGCCTg   >  1:5643320/1‑93 (MQ=255)
                                                                                      tACACCCTACCGTGCAAGGACTGCGTCTGTTTGAAGAAGTGCAACGATCCTGGTACGGACTGGATCGCATTGTCAGCGCCGCAGAAAGTCTgc  >  2:6896048/1‑93 (MQ=255)
                                                                                      tACACCCTACCGTGCAAGGACTGCGTCTGTTTGAAGAAGTGCAACGATCCTGGTACGGACTGGATCGCATTGTCAGCGCCGCAGAAAGTCTgc  <  1:7899362/93‑1 (MQ=255)
                                                                                          |                                                                                        
CACCTCACAGCCAACCGTCAGCCGCGAACTTGCGCGCTTTGAGAAGGTGATCGGGCTGAAATTGTTTGAGCGCGTACGTGGGCGATTACATCCTACCGTGCAAGGACTGCGTCTGTTTGAAGAAGTGCAACGATCCTGGTACGGACTGGATCGCATTGTCAGCGCCGCAGAAAGTCTGC  >  NC_000913/2977129‑2977307

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

BRESEQ :: bam2aln output
ACACACCTCACAGCCAACCGTCAGCCGCGAACTTGCGCGCTTTGAGAAGGTGATCGGGCTGAAATTGTTTGAGCGCGTACGTGGGCGATTACATCCTACCGTGCAAGGACTGCGTCTGTTTGAAGAAGTGCAACGATCCTGGTACGGACTGGATCGCATTGTCAGCGCCGCAGAAAGTCTGCGCGAG  >  NC_000913/2977126‑2977312
                                                                                             |                                                                                             
ACACACCTCACAGCCGACCGTCAGCCGCGAACTTGCGCGCTTTGAGAAGGTGATCGGGCTGAAATTGTTTGAGCGCGTACGTGGGCGATTACAC                                                                                               <  SRR4302543.2733883/94‑1 (MQ=60)
 CACACCTCACAGCCAACCGTCAGCCGCGAACTTGCGCGCTTTGAGAAGGTGATCGGGCTGAAATTGTTTGAGCGCGTACGTGGGCGATTACACC                                                                                              <  SRR4302543.3771005/94‑1 (MQ=60)
  ACACCTCACAGCCAACCGTCAGCCGCGAACTTGCGCGCTTTGAGAAGGTGATCGGGCTGAAATTGTTTGAGCGCGTACGTGGGCGATTACACCC                                                                                             <  SRR4302543.7169777/94‑1 (MQ=60)
  ACACCTCACAGCCAACCGTCAGCCGCGAACTTGCGCGCTTTGAGAAGGTGATCGGGCTGAAATTGTTTGAGCGCGTACGTGGGCGATTACACCC                                                                                             <  SRR4302543.281034/94‑1 (MQ=60)
   CACCTCACAGCCAACCGTCAGCCGCGAACTTGCGCGCTTTGAGAAGGTGATCGGGCTGAAATTGTTTGAGCGCGTACGTGGGCGATTACACCCT                                                                                            <  SRR4302543.6862103/94‑1 (MQ=60)
   CACCTCACAGCCAACCGTCAGCCGCGAACTTGCGCGCTTTGAGAAGGTGATCGGGCTGAAATTGTTTGAGCGCGTACGTGGGCGATTACACCCT                                                                                            <  SRR4302543.822595/94‑1 (MQ=60)
   CACCTCACAGCCAACCGTCAGCCGCGAACTTGCGCGCTTTGAGAAGGTGATCGGGCTGAAATTGTTTGAGCGCGTACGTGGGCGATTACACCCT                                                                                            <  SRR4302543.822594/94‑1 (MQ=60)
     CCTCACAGCCAACCGTCAGCCGCGAACTTGCGCGCTTTGAGAAGGTGATCGGGCTGAAATTGTTTGAGCGCGTACGTGGGCGATTACACCCTAC                                                                                          >  SRR4302543.7270683/1‑94 (MQ=60)
     CCTCACAGCCAACCGTCAGCCGCGAACTTGCGCGCTTTGAGAAGGTGATCGGGCTGAAATTGTTTGAGCGCGTACGTGGGCGATTACACCCTAC                                                                                          >  SRR4302543.2179719/1‑94 (MQ=60)
     CCTCACAGCCAACCGTCAGCCGCGAACTTGCGCGCTTTGAGAAGGTGATCGGGCTGAAATTGTTTGAGCGCGTACGTGGGCGATTACACCCTAC                                                                                          <  SRR4302543.7988470/94‑1 (MQ=60)
     CCTCACAGCCAACCGTCAGCCGCGAACTTGCGCGCTTTGAGAAGGTGATCGGGCTGAAATTGTTTGAGCGCGGACGTGGGGGATTACACCCTAC                                                                                          >  SRR4302543.2814864/1‑94 (MQ=60)
      CTCACAGCCAACCGTCAGCCGCGAACTTGCGCGCTTTGAGAAGGTGATCGGGCTGAAATTGTTTGAGCGCGTACGTGGGCGATTACACCCTACC                                                                                         >  SRR4302543.4510815/1‑94 (MQ=60)
      CTCACAGCCAACCGTCAGCCGCGAACTTGCGCGCTTTGAGAAGGTGATCGGGCTGAAATTGTTTGAGCGCGTACGTGGGCGATTACACCCTACC                                                                                         >  SRR4302543.2858659/1‑94 (MQ=60)
      CTCACAGCCAACCGTCAGCCGCGAACTTGCGCGCTTTGAGAAGGTGATCGGGCTGAAATTGTTTGAGCGCGTACGTGGGCGATTACACCCTACC                                                                                         >  SRR4302543.149391/1‑94 (MQ=60)
      CTCACAGCCAACCGTCAGCCGCGAACTTGCGCGCTTTGAGAAGGTGATCGGGCTGAAATTGTTTGAGCGCGTACGTGGGCGATTACACCCTACC                                                                                         >  SRR4302543.149390/1‑94 (MQ=60)
         ACAGCCAACCGTCAGCCGCGAACTTGCGCGCTTTGAGAAGGTGATCGGGCTGAAATTGTTTGAGCGCGTACGTGGGCGATTACACCCTACCGTG                                                                                      <  SRR4302543.1185549/94‑1 (MQ=60)
           AGCCAACCGTCAGCCGCGAACTTGCGCACTTTGAGAAGGTGATCGGGCTGAAATTGTTTGAGCGCGTACGTGGGCGATTACACCCTACCGTGCA                                                                                    >  SRR4302543.3047798/1‑94 (MQ=60)
            GCCAACCGTCAGCCGCGAACTTGCGCGCTTTGAGAAGGTGATCGGGCTGAAATTGTTTGAGCGCGTACGTGGGCGATTACACCCTACCGTGCAA                                                                                   >  SRR4302543.33548/1‑94 (MQ=60)
            GCCAACCGTCAGCCGCGAACTTGCGCGCTTTGAGAAGGTGATCGGGCTGAAATTGTTTGAGCGCGTACGTGGGCGATTACACCCTACCGTGCAA                                                                                   >  SRR4302543.5468596/1‑94 (MQ=60)
             CCAACCGTCAGCCGCGAACTTGCGCGCTTTGAGAAGGTGATCGGGCTGAAATTGTTTGAGCGCGTACGTGGGCGATTACACCCTACCGTGCAAG                                                                                  <  SRR4302543.2428364/94‑1 (MQ=60)
             CCAACCGTCAGCCGCGAACTTGCGCGCTTTGAGAAGGTGATCGGGCTGAAATTGTTTGAGCGCGTACGTGGGCGATTACACCCTACCGTGCAAG                                                                                  <  SRR4302543.944408/94‑1 (MQ=60)
              CAACCGTCAGCCGCGAACTTGCGCGCTTTGAGAAGGTGATCGGGCTGAAATTGTTTGAGCGCGTACGTGGGCGATTACACCCTACCGTGCAAGG                                                                                 <  SRR4302543.6246226/94‑1 (MQ=60)
              CAACCGTCAGCCGCGAACTTGCGCGCTTTGAGAAGGTGATCGGGCTGAAATTGTTTGAGCGCGTACGTGGGCGATTACACCCTACCGTGCAAGG                                                                                 <  SRR4302543.6618201/94‑1 (MQ=60)
              CAACCGTCAGCCGCGAACTTGCGCGCTTTGAGAAGGTGATCGGGCTGAAATTGTTTGAGCGCGTACGTGGGCGATTACACCCTACCGTGCAAGG                                                                                 >  SRR4302543.5490648/1‑94 (MQ=60)
              CAACCGTCAGCCGCGAACTTGCGCGCTTTGAGAAGGTGATCGGGCTGAAATTGTTTGAGCGCGTACGTGGGCGATTACACCCTACCGTGCAAGG                                                                                 >  SRR4302543.3315549/1‑94 (MQ=60)
              CAACCGTCAGCCGCGAACTTGCGCGCTTTGAGAAGGTGATCGGGCTGAAATTGTTTGAGCGCGTACGTGGGCGATTACACCCTACCGTGCAAGG                                                                                 >  SRR4302543.3284822/1‑94 (MQ=60)
               AACCGTCAGCCGCGAACTTGCGCGCTTTGAGAAGGTGATCGGGCTGAAATTGTTTGAGCGCGTACGTGGGCGATTACACCCTACCGTGCAAGGC                                                                                >  SRR4302543.1697515/1‑94 (MQ=60)
                agcgtcagacgcgagctgcCGCGCTTTGAAAAGGTGATCGGGCTGAAATTGTTGGAGCGCGTACGTGGGCGATTACACCCTACCGTGCAAGGAC                                                                               <  SRR4302543.6553749/75‑1 (MQ=60)
                ACCGTCAGCCGCGAACTTGCGCGCTTTGAGAAGGTGATCGGGCTGAAATTGTTTGAGCGCGTACGTGGGCGATTACACCCTACCGTGCAAGGAC                                                                               <  SRR4302543.5850316/94‑1 (MQ=60)
                ACCGTCAGCCGCGAACTTGCGCGCTTTGAGAAGGTGATCGGGCTGAAATTGTTTGAGCGCGTACGTGGGCGATTACACCCTACCGTGCAAGGAC                                                                               <  SRR4302543.6553750/94‑1 (MQ=60)
                 CCGTCAGCCGCGAACTTGCGCGCTTTGAGAAGGTGATCGGGCTGAAATTGTTTGAGCGCGTACGTGGGCGATTACACCCTACCGTGCAAGGACT                                                                              <  SRR4302543.26360/94‑1 (MQ=60)
                 CCGTCAGCCGCGAACTTGCGCGCTTTGAGAAGGTGATCGGGCTGAAATTGTTTGAGCGCGTACGTGGGCGATTACACCCTACCGTGCAAGGACT                                                                              <  SRR4302543.143075/94‑1 (MQ=60)
                 CCGTCAGCCGCGAACTTGCGCGCTTTGAGAAGGTGATCGGGCTGAAATTGTTTGAGCGCGTACGTGGGCGATTACACCCTACCGTGCAAGGACT                                                                              <  SRR4302543.7637163/94‑1 (MQ=60)
                  CGTCAGCCGCGAACTTGCGCGCTTTGAGAAGGTGATCGGGCTGAAATTGTTTGAGCGCGTACGTGGGCGATTACACCCTACCGTGCAAGGACTG                                                                             <  SRR4302543.5839360/94‑1 (MQ=60)
                  CGTCAGCCGCGAACTTGCGCGCTTTGAGAAGGTGATCGGGCTGAAATTGTTTGAGCGCGTACGTGGGCGATTACACCCTACCGTGCAAGGACTG                                                                             <  SRR4302543.7517553/94‑1 (MQ=60)
                  CGTCAGCCGCGAACTTGCGCGCTTTGAGAAGGTGATCGGGCTGAAATTGTTTGAGCGCGTACGTGGGCGATTACACCCTACCGTGCAAGGACTG                                                                             >  SRR4302543.3803858/1‑94 (MQ=60)
                      AGCCGCGAACTTGCGCGCTTTGAGAAGGTGATCGGGCTGAAATTGTTTGAGCGCGTACGTGGGCGATTACACCCTACCGTGCAAGGACTGCGTC                                                                         >  SRR4302543.4766333/1‑94 (MQ=60)
                       GCCGCGAACTTGCGCGCTTTGAGAAGGTGATCGGGCTGAAATTGTTTGAGCGCGTACGTGGGCGATTACACCCTACCGTGCAAGGACTGCGTCT                                                                        <  SRR4302543.3141138/94‑1 (MQ=60)
                       GCCGCGAACTTGCGCGCTTTGAGAAGGTGATCGGGCTGAAATTGTTTGAGCGCGTACGTGGGCGATTACACCCTACCGTGCAAGGACTGCGTCT                                                                        <  SRR4302543.2505460/94‑1 (MQ=60)
                       GCCGCGAACTTGCGCGCTTTGAGAAGGTGATCGGGCTGAAATTGTTTGAGCGCGTACGTGGGCGATTACACCCTACCGTGCAAGGACTGCGTCT                                                                        <  SRR4302543.6495094/94‑1 (MQ=60)
                        CCGCGAACTTGCGCGCTTTGAGAAGGTGATCGGGCTGAAATTGTTTGAGCGCGTACGTGGGCGATTACACCCTACCGTGCAAGGACTGCGTCTG                                                                       <  SRR4302543.2736531/94‑1 (MQ=60)
                         CGCGAACTTGCGCGCTTTGAGAAGGTGATCGGGCTGAAATTGTTTGAGCGCGTACGTGGGCGATTACACCCTACCGTGCAAGGACTGCGTCTGT                                                                      >  SRR4302543.4791481/1‑94 (MQ=60)
                         CGCGAACTTGCGCGCTTTGAGAAGGTGATCGGGCTGAAATTGTTTGAGCGCGTACGTGGGCGATTACACCCTACCGTGCAAGGACTGCGTCTGT                                                                      >  SRR4302543.262210/1‑94 (MQ=60)
                           GGAACTTGCGCGCTTTGAGAAGGTGATCGGGCTGAAATTGTTTGAGCGCGTACGTGGGCGATTACACCCTACCGTGCAAGGACTGCGTCTGTTT                                                                    <  SRR4302543.7527297/94‑1 (MQ=60)
                           CGAACTTGCGCGCTTTGAGAAGGTGATCGGGCTGAAATTGTTTGAGCGCGTACGTGGGCGATTACACCCTACCGTGCAAGGACTGCGTCTGTTT                                                                    >  SRR4302543.7589712/1‑94 (MQ=60)
                            GAACTTGCGCGCTTTGAGAAGGTGATCGGGCTGAAATTGTTTGAGCGCGTACGTGGGCGATTACACCCTACCGTGCAAGGACTGCGTCTGTTTG                                                                   >  SRR4302543.4887212/1‑94 (MQ=60)
                            GAACTTGCGCGCTTTGAGAAGGTGATCGGGCTGAAATTGTTTGAGCGCGTACGTGGGCGATTACACCCTACCGTGCAAGGACTGCGTCTGTTTG                                                                   <  SRR4302543.1788975/94‑1 (MQ=60)
                            GAACTTGCGCGCTTTGAGAAGGTGATCGGGCTGAAATTGTTTGAGCGCGTACGTGGGCGATTACACCCTACCGTGCAAGGACTGCGTCTGTTTG                                                                   >  SRR4302543.4250085/1‑94 (MQ=60)
                            GAACTTGCGCGCTTTGAGAAGGGGATCGGGCTGAAATTGTTTGAGCGCGTACGTGGGCGATTACACCCTACCGTGCAAGGACTGCGTCTGTTTG                                                                   >  SRR4302543.1833229/1‑94 (MQ=60)
                             AACTTGCGCGCTTTGAGAAGGTGATCGGGCTGAAATTGTTTGAGCGCGTACGTGGGCGATTACACCCTACCGTGCAAGGACTGCGTCTGTTTGA                                                                  <  SRR4302543.3935984/94‑1 (MQ=60)
                             AACTTGCGCGCTTTGAGAAGGTGATCGGGCTGAAATTGTTTGAGCGCGTACGTGGGCGATTACACCCTACCGTGCAAGGACTGCGTCTGTTTGA                                                                  <  SRR4302543.713360/94‑1 (MQ=60)
                             AACTTGCGCGCTTTGAGAAGGTGATCGGGCTGAAATTGTTTGAGCGCGTACGTGGGCGATTACACCCTACCGTGCAAGGACTGCGTCTGTTTGA                                                                  <  SRR4302543.2032960/94‑1 (MQ=60)
                              ACTTGCGCGCTTTGAGAAGGTGATCGGGCTGAAATTGTTTGAGCGCGTACGTGGGCGATTACACCCTACCGTGCAAGGACTGCGTCTGTTTGAA                                                                 <  SRR4302543.5862814/94‑1 (MQ=60)
                               CTTGCGCGCTTTGAGAAGGTGATCGGGCTGAAATTGTTTGAGCGCGTACGTGGGCGATTACACCCTACCGTGCAAGGACTGCGTCTGTTTGAAG                                                                >  SRR4302543.6000395/1‑94 (MQ=60)
                                TTGCGCGCTTTGAGAAGGTGATCGGGCTGAAATTGTTTGAGCGCGTACGTGGGCGATTACACCCTACCGTGCAAGGACTGCGTCTGTTTGAAGA                                                               <  SRR4302543.5041296/94‑1 (MQ=60)
                                 TGCGCGCTTTGAGAAGGTGATCGGGCTGAAATTGTTTGAGCGCGTACGTGGGCGATTACACCCTACCGTGCAAGGACTGCGTCTGTTTGAAGAA                                                              <  SRR4302543.3783267/94‑1 (MQ=60)
                                  GCGCGCTTTGAGAAGGTGATCGGGCTGAAATTGTTTGAGCGCGTACGTGGGCGATTACACCCTACCGTGCAAGGACTGCGTCTGTTTGAAGAAG                                                             >  SRR4302543.5577999/1‑94 (MQ=60)
                                  GCGCGCTTTGAGAAGGTGATCGGGCTGAAATTGTTTGAGCGCGTACGTGGGCGATTACACCCTACCGTGCAAGGACTGCGTCTGTTTGAAGAAG                                                             <  SRR4302543.462476/94‑1 (MQ=60)
                                   CGCGCTTTGAGAAGGTGATCGGGCTGAAATTGTTTGAGCGCGTACGTGGGCGATTACACCCTACCGTGCAAGGACTGCGTCTGTTTGAAGAAGT                                                            <  SRR4302543.1854757/94‑1 (MQ=60)
                                     CGCTTTGAGAAGGTGATCGGGCTGAAATTGTTTGAGCGCGTACGTGGGCGATTACACCCTACCGTGCAAGGACTGCGTCTGTTTGAAGAAGTGC                                                          >  SRR4302543.7886866/1‑94 (MQ=60)
                                     CGCTTTGAGAAGGTGATCGGGCTGAAATTGTTTGAGCGCGTACGTGGGCGATTACACCCTACCGTGCAAGGACTGCGTCTGTTTGAAGAAGTGC                                                          >  SRR4302543.3550781/1‑94 (MQ=60)
                                     CGCTTTGAGAAGGTGATCGGGCTGAAATTGTTTGAGCGCGTACGTGGGCGATTACACCCTACCGTGCAAGGACTGCGTCTGTTTGAAGAAGTGC                                                          <  SRR4302543.6280865/94‑1 (MQ=60)
                                     CGCTTTGAGAAGGTGATCGGGCTGAAATTGTTTGAGCGCGTACGTGGGCGATTACACCCTACCGTGCAAGGACTGCGTCTGTTTGAAGAAGTGC                                                          <  SRR4302543.2922911/94‑1 (MQ=60)
                                      GCTTTGAGAAGGTGATCGGGCTGAAATTGTTTGAGCGCGTACGTGGGCGATTACACCCTACCGTGCAAGGACTGCGTCTGTTTGAAGAAGTGCA                                                         <  SRR4302543.7956280/94‑1 (MQ=60)
                                      GCTTTGAGAAGGTGATCGGGCTGAAATTGTTTGAGCGCGTACGTGGGCGATTACACCCTACCGTGCAAGGACTGCGTCTGTTTGAAGAAGTGCA                                                         <  SRR4302543.7956281/94‑1 (MQ=60)
                                       CTTTGAGAAGGTGATCGGGCTGAAATTGTTTGAGCGCGTACGTGGGCGATTACACCCTACCGTGCAAGGACTGCGTCTGTTTGAAGAAGTGCAA                                                        >  SRR4302543.909246/1‑94 (MQ=60)
                                       CTTTGAGAAGGTGATCGGGCTGAAATTGTGTGAGCGCGTACGTGGGCGATTACACCCTACCGTGCAAGGACTGCGTCTGTTTGAAGAAGTGCAA                                                        <  SRR4302543.95730/94‑1 (MQ=60)
                                         TTGAGAAGGTGATCGGGCTGAAATTGTTTGAGCGCGTACGTGGGCGATTACACCCTACCGTGCAAGGACTGCGTCTGTTTGAAGAAGTGCAACG                                                      <  SRR4302543.3363313/94‑1 (MQ=60)
                                         TTGAGAAGGTGATCGGGCTGAAATTGTTTGAGCGCGTACGTGGGCGATTACACCCTACCGTGCAAGGACTGCGTCTGTTTGAAGAAGTGCAACG                                                      <  SRR4302543.1847202/94‑1 (MQ=60)
                                         TTGAGAAGGTGATCGGGCTGAAATTGTTTGAGCGCGTACGTGGGCGATTACACCCTACCGTGCAAGGACTGCGTCTGTTTGAAGAAGTGCAACG                                                      >  SRR4302543.6051475/1‑94 (MQ=60)
                                          TGAGAAGGTGATCGGGCTGAAATTGTTTGAGCGCGTACGTGGGCGATTACACCCTACCGTGCAAGGACTGCGTCTGTTTGAAGAAGTGCAACGA                                                     >  SRR4302543.5477862/1‑94 (MQ=60)
                                           GAGAAGGTGATCGGGCTGAAATTGTTTGAGCGCGTACGTGGGCGATTACACCCTACCGTGCAAGGACTGCGTCTGTTTGAAGAAGTGCAACGAT                                                    >  SRR4302543.1986161/1‑94 (MQ=60)
                                           GAGAAGGTGATCGGGCTGAAATTGTTTGAGCGCGTACGTGGGCGATTACACCCTACCGTGCAAGGACTGCGTCTGTTTGAAGAAGTGCAACGAT                                                    <  SRR4302543.4179513/94‑1 (MQ=60)
                                            AGAAGGTGATCGGGCTGAAATTGTTTGAGCGCGTACGTGGGCGATTACACCCTACCGTGCAAGGACTGCGTCTGTTTGAAGAAGTGCAACGATC                                                   <  SRR4302543.5481374/94‑1 (MQ=60)
                                            AGAAGGTGATCGGGCTGAAATTGTTTGAGCGCGTACGTGGGCGATTACACCCTACCGTGCAAGGACTGCGTCTGTTTGAAGAAGTGCAACGATC                                                   >  SRR4302543.6698427/1‑94 (MQ=60)
                                            AGAAGGTGATCGGGCTGAAATTGTTTGAGCGCGTACGTGGGCGATTACACCCTACCGTGCAAGGACTGCGTCTGTTTGAAGAAGTGCAACGATC                                                   <  SRR4302543.1471812/94‑1 (MQ=60)
                                             GAAGGTGATCGGGCTGAAATTGTTTGAGCGCGTACGTGGGCGATTACACCCTACCGTGCAAGGACTGCGTCTGTTTGAAGAAGTGCAACGATCC                                                  >  SRR4302543.1588493/1‑94 (MQ=60)
                                              AAGGTGATCGGGCTGAAATTGTTTGAGCGCGTACGTGGGCGATTACACCCTACCGTGCAAGGACTGCGTCTGTTTGAAGAAGTGCAACGATCCT                                                 <  SRR4302543.2312000/94‑1 (MQ=60)
                                              AAGGTGATCGGGCTGAAATTGTTTGAGCGCGTACGTGGGCGATTACACCCTACCGTGCAAGGACTGCGTCTGTTTGAAGAAGTGCAACGATCCT                                                 >  SRR4302543.5853995/1‑94 (MQ=60)
                                              AAGGCGCTCGGGCTGAAATTGTTTGACCGCGTACGTGGTCGATTACACCCTACCGTGCAACGACTGCGTCTGTTTGAAGAAGTGCAACGATCCT                                                 <  SRR4302543.2478811/94‑1 (MQ=60)
                                                GGTGATCGGGCTGAAATTGTTTGAGCGCGTACGTGGGCGATTACACCCTACCGTGCAAGGACTGCGTCTGTTTGAAGAAGTGCAACGATCCTGG                                               <  SRR4302543.3320557/94‑1 (MQ=60)
                                                GGTGATCGGGCTGAAATTGTTTGAGCGCGTACGTGGGCGATTACACCCTACCGTGCAAGGACTGCGTCTGTTTGAAGAAGTGCAACGATCCTGG                                               <  SRR4302543.6383729/94‑1 (MQ=60)
                                                GGTGATCGGGCTGAAATTGTTTGAGCGCGTACGTGGGCGATTACACCCTACCGTGCAAGGACTGCGTCTGTTTGAAGAAGTGCAACGATCCTGG                                               <  SRR4302543.6790717/94‑1 (MQ=60)
                                                GGTGATCGGGCTGAAATTGTTTGAGCGCGTACGTGGGCGATTACACCCTACCGTGCAAGGACTGCGTCTGTTTGAAGAAGTGCAACGATCCTGG                                               <  SRR4302543.4625076/94‑1 (MQ=60)
                                                GGTGATCGGGCTGAAATTGTTTGAGCGCGTACGTGGGCGATTACACCCTACCGTGCAAGGACTGCGTCTGTTTGAAGAAGTGCAACGATCCTGG                                               >  SRR4302543.1074475/1‑94 (MQ=60)
                                                 GTGATCGGGCTGAAATTGTTTGAGNGCGTANGTGGGNGATTACACCCTACCGTGAAAGGACTGCGTCTNTNTNNAGAAGTGCANCGNTNCNNGN                                              >  SRR4302543.7185904/1‑94 (MQ=60)
                                                 GTGATCGGGCTGAAATTGTTTGAGCGCGTACGTGGGCGATTACACCCTACCGTGCAAGGACTGCGTCTGTTTGAAGAAGTGCAACGATCCTGGT                                              <  SRR4302543.4488716/94‑1 (MQ=60)
                                                 GTGATCGGGCTGAAATTGTTTGAGCGCGTACGTGGGCGATTACACCCTACCGTGCAAGGACTGCGTCTGTTTGAAGAAGTGCAACGATCCTGGT                                              <  SRR4302543.4551102/94‑1 (MQ=60)
                                                  TGATCGGGCTGAAATTGTTTGAGCGCGTACGTGGGCGATTACACCCTACCGTGCAAGGACTGCGTCTGTTTGAAGAAGTGCAACGATCCTGGTA                                             >  SRR4302543.5424567/1‑94 (MQ=60)
                                                  TGATCGGGCTGAAATTGTTTGAGCGCGTACGTGGGCGATTACACCCTACCGTGCAAGGACTGCGTCTGTTTGAAGAAGTGCAACGATCCTGGTA                                             >  SRR4302543.3912377/1‑94 (MQ=60)
                                                   GATCGGGCTGAAATTGTTTGAGCGCGTACGTGGGCGATTACACCCTACCGTGCAAGGACTGCGTCTGTTTGAAGAAGTGCAACGATCCTGGTAC                                            <  SRR4302543.3841848/94‑1 (MQ=60)
                                                   GATCGGGCTGAAATTGTTTGAGCGCGTACGTGGGCGATTACACCCTACCGTGCAAGGACTGCGTCTGTTTGAAGAAGTGCAACGATCCTGGTAC                                            <  SRR4302543.2397489/94‑1 (MQ=60)
                                                   GATCGGGCTGAAATTGTTTGAGCGCGTACGTGGGCGATTACACCCTACCGTGCAAGGACTGCGTCTGTTTGAAGAAGTGCAACAATCCTGGTAC                                            <  SRR4302543.4697250/94‑1 (MQ=60)
                                                    ATCGGGCTGAAATTGTTTGAGCGCGTACGTGGGCGATTACACCCTACCGTGCAAGGACTGCGTCTGTTTGAAGAAGTGCAACGATCCTGGTACG                                           >  SRR4302543.3237242/1‑94 (MQ=60)
                                                    ATCGGGCTGAAATTGTTTGAGCGCGTACGTGGGCGATTACACCCTACCGTGCAAGGACTGCGTCTGTTTGAAGAAGTGCAACGATCCTGGTACG                                           <  SRR4302543.855868/94‑1 (MQ=60)
                                                    ATCGGGCTGAAATTGTTTGAGCGCGTACGTGGGCGATTACACCCTACCGTGCAAGGACTGCGTCTGTTTGAAGAAGTGCAACGATCCTGGTACG                                           <  SRR4302543.2841677/94‑1 (MQ=60)
                                                      CGGGCTGAAATTGTTTGAGCGCGTACGTGGGCGATTACACCCTACCGTGCAAGGACTGCGTCTGTTTGAAGAAGTGCAACGATCCTGGTACGGA                                         <  SRR4302543.139692/94‑1 (MQ=60)
                                                      CGGGCTGAAATTGTTTGAGCGCGTACGTGGGCGATTACACCCTACCGTGCAAGGACTGCGTCTGTTTGAAGAAGTGCAACGATCCTGGTACGGA                                         >  SRR4302543.7278793/1‑94 (MQ=60)
                                                       GGGCTGAAATTGTTTGAGCGCGTACGTGGGCGATTACACCCTACCGTGCAAGGACTGCGTCTGTTTGAAGAAGTGCAACGATCCTGGTACGGAC                                        >  SRR4302543.682735/1‑94 (MQ=60)
                                                       GGGCTGAAATTGTTTGAGCGCGTACGTGAGCGATTACACCCTACCGTGCAAGGACTGCGTCTGTTTGAAGAAGTGCAACGATCCTGGTACGGTC                                        <  SRR4302543.7113654/94‑1 (MQ=60)
                                                        GGCTGAAATTGTTTGAGCGCGTACGTGGGCGATTACACCCTACCGTGCAAGGGCTGCGTCTGTTTGAAGAAGTGCAAAGATACTGGTAGGGACT                                       >  SRR4302543.2967936/1‑94 (MQ=60)
                                                        GGCTGAAATTGTTTGAGCGCGTACGTGGGCGATTACACCCTACCGTGCAAGGACTGCGTCTGTTTGAAGAAGTGCGACGATCCTGGTACGGACT                                       >  SRR4302543.2967720/1‑94 (MQ=60)
                                                        GGCTGAAATTGTTTGAGCGCGTACGTGGGCGATTACACCCTACCGTGCAAGGACTGCGTCTGTTTGAAGAAGTGCAACGATCCTGGTACGGACT                                       <  SRR4302543.1129633/94‑1 (MQ=60)
                                                        GGCTGAAATTGTTTGAGCGCGTACGTGGGCGATTACACCCTACCGTGCAAGGACTGCGTCTGTTTGAAGAAGTGCAACGATCCTGGTACGGACT                                       >  SRR4302543.6369515/1‑94 (MQ=60)
                                                         GCTGAAATTGTTTGAGCGCGTACGTGGGCGATTACACCCTACCGTGCAAGGACTGCGTCTGTTTGAAGAAGTGCAACGATCCTGGTACGGACTG                                      <  SRR4302543.1963297/94‑1 (MQ=60)
                                                          CTGAAATTGTTTGAGCGCGTACGTGGGCGATTACACCCTACCGTGCAAGGACTGCGTCTGTTTGAAGAAGTGCAACGATCCTGGTACGGACTGG                                     <  SRR4302543.1556463/94‑1 (MQ=60)
                                                          CTGAAATTGTTTGAGCGCGTACGTGGGCGATTACACCCTACCGTGCAAGGACTGCGTCTGTTTGAAGAAGTGCAACGATCCTGGTACGGACTGG                                     >  SRR4302543.743/1‑94 (MQ=60)
                                                           TGAAATTGTTTGAGCGCGTACGTGGGCGATTACACCCTACCGTGCAAGGACTGCGTCTGTTTGAAGAAGTGCAACGATCCTGGTACGGACTGGA                                    >  SRR4302543.1986935/1‑94 (MQ=60)
                                                           TGAAATTGTTTGAGCGCGTACGTGGGCGATTACACCCTACCGTGCAAGGACTGCGTCTGTTTGAAGAAGTGCAACGATCCTGGTACGGACTGGA                                    >  SRR4302543.7600031/1‑94 (MQ=60)
                                                            GAAATTGTTTGAGCGCGTACGTGGGCGATTACACCCTACCGTGCAAGGACTGCGTCTGTTTGAAGAAGTGCAACGATCCTGGTACGGACTGGAT                                   <  SRR4302543.3804382/94‑1 (MQ=60)
                                                            GAAATTGTTTGAGCGCGTACGTGGGCGATTACACCCTACCGTGCAAGGACTGCGTCTGTTTGAAGAAGTGCAACGATCCTGGTACGGACTGGAT                                   >  SRR4302543.7025935/1‑94 (MQ=60)
                                                            GAAATTGTTTGAGCGCGTACGTGGGCGATTACACCCTACCGTGCAAGGACTGCGTCTGTTTGAAGAAGTGCAACGATCCTGGTACGGACTGGAT                                   >  SRR4302543.2066408/1‑94 (MQ=60)
                                                             AAATTGTTTGAGCGCGTACGTGGGCGATTACACCCTACCGTGCAAGGACTGCGTCTGTTTGAAGAAGTGCAACGATCCTGGTACGGACTGGATC                                  <  SRR4302543.5887016/94‑1 (MQ=60)
                                                             AAATTGTTTGAGCGCGTACGTGGGCGATTACACCCTACCGTGCAAGGACTGCGTCTGTTTGAAGAAGTGCAACGATCCTGGTACGGACTGGATC                                  >  SRR4302543.7316534/1‑94 (MQ=60)
                                                             AAATTGTTTGAGCGCGTACGTGGGCGATTACACCCTACCGTGCAAGGACTGCGTCTGTTTGAAGAAGTGCAACGATCCTGGTACGGACTGGATC                                  <  SRR4302543.4046657/94‑1 (MQ=60)
                                                              AATTGTTTGAGCGCGTACGTGGGCGATTACCCCCTACCGTGCAAGGACTGCGTCTGTTTGAAGAAGTGCAACGATCCTGGTACGGACTGGATCG                                 <  SRR4302543.5889658/94‑1 (MQ=60)
                                                              AATTGTTTGAGCGCGTACGTGGGCGATTACACCCTACCGTGCAAGGACTGCGTCTGTTTGAAGAAGTGCAACGATCCTGGTACGGACTGGATCG                                 <  SRR4302543.623594/94‑1 (MQ=60)
                                                               ATTGTTTGAGCGCGTACGTGGGCGATTACACCCTACCGTGCAAGGACTGCGTCTGTTTGAAGAAGTGCAACGATCCTGGTACGGACTGGATCGC                                >  SRR4302543.4431091/1‑94 (MQ=60)
                                                               ATTGTTTGAGCGCGTACGTGGGCGATTACACCCTACCGTGCAAGGACTGCGTCTGTTTGAAGAAGTGCAACGATCCTGGTACGGACTGGATCGC                                >  SRR4302543.3063444/1‑94 (MQ=60)
                                                               ATTGTTTGAGCGCGTACGTGGGCGATTACACCCTACCGTGCAAGGACTGCGTCTGTTTGAAGAAGTGCAACGATCCTGGTACGGACTGGATCGA                                >  SRR4302543.4141952/1‑94 (MQ=60)
                                                               ATTGTTTGAGCGCGTACGTGGGCGATTACACCCTACCGTGCAAGGACTGCGTCTGTTTGAAGAAGTGCAACGATCCTGCTACGCACTGGATCGA                                >  SRR4302543.4141953/1‑94 (MQ=60)
                                                                 TGTTTGAGCGCGTACGTGGGCGATTACACCCTACCGTGCAAGGACTGCGTCTGTTTGAAGAAGTGCAACGATCCTGGTACGGACTGGATCGCAT                              <  SRR4302543.3921199/94‑1 (MQ=60)
                                                                 TGTTTGAGCGCGTACGTGGGCGATTACACCCTACCGTGCAAGGACTGCGTCTGTTTGAAGAAGTGCAACGATCCTGGTACGGACTGGATCGCAT                              <  SRR4302543.6680162/94‑1 (MQ=60)
                                                                 TGTTTGAGCGCGTACGTGGGCGATTACACCCTACCGTGCAAGGACTGCGTCTGTTTGAAGAAGTGCAACGATCCTGGTACGGACTGGATCGCAT                              >  SRR4302543.754232/1‑94 (MQ=60)
                                                                 TGTTTGAGCGCGTACGTGGGCGATTACACCCTACCGTGCAAGGACTGCGTCTGTTTGAAGAAGTGCAACGATCCTGGTACGGACTGGATCGCAT                              <  SRR4302543.626891/94‑1 (MQ=60)
                                                                 TGTTTGAGCGCGTACGTGGGCGATTACACCCTACCGTGCAAGGACTGCGTCTGTTTGAAGAAGTGCAACGATCCTGGAACGGACTGGATCGCAT                              >  SRR4302543.6495849/1‑94 (MQ=60)
                                                                  GTTTGAGCGCGTACGTGGGCGATTACACCCTACCGTGCAAGGACTGCGTCTGTTTGAAGAAGTGCAACGATCCTGGTACGGACTGGATCGCATT                             >  SRR4302543.1937176/1‑94 (MQ=60)
                                                                  GTTTGAGCGCGTACGTGGGCGATTACACCCTACCGTGCAAGGACTGCGTCTGTTTGAAGAAGTGCAACGATCCTGGTACGGACTGGATCGCATT                             <  SRR4302543.499516/94‑1 (MQ=60)
                                                                  GTTTGAGCGCGTACGTGGGCGATTACACCCTACCGTGCAAGGACTGCGTCTGTTTGAAGAAGTGCAACGATCCTGGTACGGACTGGATCGCATT                             <  SRR4302543.7105401/94‑1 (MQ=60)
                                                                    TTGAGCGCGTACGTGGGCGATTACATCCTACCGTGCAAGGACTGCGTCTGTTTGAAGAAGTGCAACGATCCTGGTACGGACTGGATCGCATTGT                           >  SRR4302543.7281573/1‑94 (MQ=60)
                                                                     TGAGCGCGTACGTGGGCGATTACACCCTACCGTGCAAGGACTGCGTCTGTTTGAAGAAGTGCAACGATCCTGGTACGGACTGGATCGCATTGTC                          <  SRR4302543.1083963/94‑1 (MQ=60)
                                                                      GAGCGCGTACGTGGGCGATTACACCCTACCGTGCAAGGACTGCGTCTGTTTGAAGAAGTGCAACGATCCTGGTACGGACTGGATCGCATTGTCA                         >  SRR4302543.5249848/1‑94 (MQ=60)
                                                                       AGCGCGTACGTGGGCGATTACACCCTACCGTGCAAGGACTGCGTCTGTTTGAAGAAGTGCAACGATCCTGGTACGGACTGGATCGCATTGTCAG                        <  SRR4302543.7654624/94‑1 (MQ=60)
                                                                       AGCGCGTACGTGGGCGATTACACCCTACCGTGCAAGGACTGCGTCTGTTTGAAGAAGTGCAACGATCCTGGTACGGACTGGATCGCATTGTCAG                        >  SRR4302543.4350087/1‑94 (MQ=60)
                                                                       AGCGCGTACGTGGGCGATTACACCCTACCGTGCAAGGACTGCGTCTGTTTGAAGAAGTGCAACGATCCTGGTACGGACTGGATCGCATTGTCAG                        <  SRR4302543.6924826/94‑1 (MQ=60)
                                                                        GCGCGTACGTGGGCGATTACACCCTACCGTGCAAGGACTGCGTCTGTTTGAAGAAGTGCAACGATCCTGGTACGGACTGGATCGCATTGTCAGC                       <  SRR4302543.1906226/94‑1 (MQ=60)
                                                                         CGCGTACGTGGGCGATTACACCCTACCGTGCAAGGACTGCGTCTGTTTGAAGAAGTGCAACGATCCTGGTACGGACTGGATCGCATTGTCAGCG                      >  SRR4302543.299384/1‑94 (MQ=60)
                                                                         CGCGTACGTGGGCGATTACACCCTACCGTGCAAGGACTGCGTCTGTTTGAAGAAGTGCAACGATCCTGGTACGGACTGGATCGCATTGTCAGCG                      <  SRR4302543.3358515/94‑1 (MQ=60)
                                                                         CGCGTACGTGGGCGATTACACCCTACCGTGCAAGGACTGCGTCTGTTTGAAGAAGTGCAACGATCCTGGTACGGACTGGATCGCATTGTCAGCG                      >  SRR4302543.4015002/1‑94 (MQ=60)
                                                                          GCGTACGTGGGCGATTACACCCTACCGTGCAAGGACTGCGTCTGTTTGAAGAAGTGCAACGATCCTGGTACGGACTGGATCGCATTGTCAGCGC                     >  SRR4302543.2013128/1‑94 (MQ=60)
                                                                          GCGTACGTGGGCGATTACACCCTACCGTGCAAGGACTGCGTCTGTTTGAAGAAGTGCAACGATCCTGGTACGGACTGGATCGCATTGTCAGCGC                     >  SRR4302543.5104227/1‑94 (MQ=60)
                                                                           CGTACGTGGGCGATTACACCCTACCGTGCAAGGACTGCGTCTGTTTGAAGAAGTGCAACGATCCTGGTACGGACTGGATCGCATTGTCAGCGCC                    >  SRR4302543.503929/1‑94 (MQ=60)
                                                                           CGTACGTGGGCGATTACACCCTACCGTGCAAGGACTGCGTCTGTTTGAAGAAGTGCAACGATCCTGGTACGGACTGGATCGCATTGTCAGCGCC                    >  SRR4302543.155805/1‑94 (MQ=60)
                                                                           CGTACGTGGGCGATTACACCCTACCGTGCAAGGACTGCGTCTGTTTGAAGAAGTGCAACGATCCTGGTACGGACTGGATCGCATTGTCAGCGCC                    >  SRR4302543.4877993/1‑94 (MQ=60)
                                                                            GTACGTGGGCGATTACACCCTACCGTGCAAGGACTGCGTCTGTTTGAAGAAGTGCAACGATCCTGGTACGGACTGGATCGCATTGTCAGCGCCG                   >  SRR4302543.7291171/1‑94 (MQ=60)
                                                                              tcggGGGCGATTACACCCTACCGTGCAAGGACTGCGTCTGTTTGAAGAAGTGCAACGATCCTGGTACGGACTGGATCGCATTGTCAGCGCCGCA                 <  SRR4302543.7517484/90‑1 (MQ=60)
                                                                               CGTGGGCGATTACACCCTACCGTGCAAGGACTGCGTCTGTTTGAAGAAGTGCAACGATCCTGGTACGGACTGGATCGCATTGTCAGCGCCGCAG                >  SRR4302543.967184/1‑94 (MQ=60)
                                                                               CGTGGGCGATTACACCCTACCGTGCAAGGACTGCGTCTGTTTGAAGAAGTGCAACGATCCTGGTACGGACTGGATCGCATTGTCAGCGCCGCAG                <  SRR4302543.106232/94‑1 (MQ=60)
                                                                                GTGGGCGATTACACCCTACCGTGCAAGGACTGCGTCTGTTTGAAGAAGTGCAACGATCCTGGTACGGACTGGATCGCATTGTCAGCGCCGCAGA               >  SRR4302543.2056596/1‑94 (MQ=60)
                                                                                 TGGGCGATTACACCCTACCGTGCAAGGACTGCGTCTGTTTGAAGAAGTGCAACGATCCTGGTACGGACTGGATCGCATTGTCAGCGCCGCAGAA              <  SRR4302543.1050478/94‑1 (MQ=60)
                                                                                  GGGCGATTACATCCTACCGTGCAAGGACTGCGTCTGTTTGAAGAAGTGCAACGATCCTGGTACGGACTGGATCGCATTGTCAGCGCCGCAGAAA             >  SRR4302543.634406/1‑94 (MQ=60)
                                                                                  GGGCGATTACACCCTACCGTGCAAGGACTGCGTCTGTTTGAAGAAGTGCAACGATCCTGGTACGGACTGGATCGCATTGTCAGCGCCGCAGAAA             >  SRR4302543.466455/1‑94 (MQ=60)
                                                                                  GGGCGATTACACCCTACCGTGCAAGGACTGCGTCTGTTTGAAGAAGTGCAACGATCCTGGTACGGACTGGATCGCATTGTCAGCGCCGCAGAAA             >  SRR4302543.40966/1‑94 (MQ=60)
                                                                                   GGCGATTACACCCTACCGTGCAAGGACTGCGTCTGTTTGAAGAAGTGCAACGATCCTGGTACGGACTGGATCGCATTGTCAGCGCCGCAGAAAG            <  SRR4302543.4757329/94‑1 (MQ=60)
                                                                                    GCGATTACACCCTACCGTGCAAGGACTGCGTCTGTTTGAAGAAGTGCAACGATCCTGGTACGGACTGGATCGCATTGTCAGCGCCGCAGAAAGT           <  SRR4302543.6724735/94‑1 (MQ=60)
                                                                                     CGATTACACCCTACCGTGCAAGGACTGCGTCTGTTTGAAGAAGTGCAACGATCCTGGTACGGACTGGATCGCATTGTCAGCGCCGCAGAAAGTC          >  SRR4302543.74086/1‑94 (MQ=60)
                                                                                     CGATTACACCCTACCGTGCAAGGACTGCGTCTGTTTGAAGAAGTGCAACGATCCTGGTACGGACTGGATCGCATTGTCAGCGCCGCAGAAAGTC          >  SRR4302543.1462732/1‑94 (MQ=60)
                                                                                     CGATTACACCCTACCGTGCAAGGACTGCGTCTGTTTGAAGAAGTGCAACGATCCTGGTACGGACTGGATCGCATTGTCAGCGCCGCAGAAAGTC          >  SRR4302543.5403932/1‑94 (MQ=60)
                                                                                     CGATTACACCCTACCGTGCAAGGACTGCGTCTGTTTGAAGAAGTGCAACGATCCTGGTACGGACTGGATCGCATTGTCAGCGCCGCAGAAAGTC          <  SRR4302543.7848066/94‑1 (MQ=60)
                                                                                     CGATTACACCCTACCGTGCAAGGACTGCGTCTGTTTGAAGAAGTGCAACGATCCTGGTACGGACTGGATCGCATTGTCAGCGCCGCAGAAAGTC          >  SRR4302543.832069/1‑94 (MQ=60)
                                                                                      GATTACACCCTACCGTGCAAGGACTGCGTCTGTTTGAAGAAGTGCAACGATCCTGGTACGGACTGGATCGCATTGTCAGCGCCGCAGAAAGTCT         <  SRR4302543.6928604/94‑1 (MQ=60)
                                                                                      GATTACACCCTACCGTGCAAGGACTGCGTCTGTTTGAAGAAGTGCAACGATCCTGGTACGGACTGGATCGCATTGTCAGCGCCGCAGAAAGTCT         >  SRR4302543.6040501/1‑94 (MQ=60)
                                                                                      GATTACACCCTACCGTGCAAGGACTGCGTCTGTTTGAAGAAGTGCAACGATCCTGGTACGGACTGGATCGCATTGTCAGCGCCGCAGAAAGTCT         <  SRR4302543.6928603/94‑1 (MQ=60)
                                                                                      GATTACACCCTACCGTGCAAGGACTGCGTCTGTTTGAAGAAGTGCAACGATCCTGGTACGGACTGGATCGCATTGTCAGCGCCGCAGAAAGTCT         >  SRR4302543.5262867/1‑94 (MQ=60)
                                                                                      GATTACACCCTACCGTGCAAGGACTGCGTCTGTTTGAAGAAGTGCAACGATCCTGGTACGGACTGGATCGCATTGTCAGCGCCGCAGAAAGTCT         >  SRR4302543.3798064/1‑94 (MQ=60)
                                                                                      GATTACACCCTACCGTGCAAGGACTGCGTCTGTTTGAAGAAGTGCAACGATCCTGGTACGGACTGGATCGAATTGTCAGCGCCGCAGAAAGTCT         >  SRR4302543.6126818/1‑94 (MQ=60)
                                                                                       ATTACACCCTACCGTGCAAGGACTGCGTCTGTTTGAAGAAGTGCAACGATCCTGGTACGGACTGGATCGCATTGTCAGGGCCGCAGAAAGCCTG        >  SRR4302543.5694764/1‑94 (MQ=60)
                                                                                       ATTACACCCTACCGTGCAAGGACTGCGTCTGTTTGAAGAAGTGCAACGATCCTGGTACGGACTGGATCGCATTGTCAGCGCCGCAGAAAGTCTG        >  SRR4302543.3454929/1‑94 (MQ=60)
                                                                                       ATTACACCCTACCGTGCAAGGACTGCGTCTGTTTGAAGAAGTGCAACGATCCTGGTACGGACTGGATCGCATTGTCAGCGCCGCAGAAAGTCTG        >  SRR4302543.4606907/1‑94 (MQ=60)
                                                                                       ATTACACCCTACCGTGCAAGGACTGCGTCTGTTTGAAGAAGTGCAACGATCCTGGTACGGACTGGATCGCATTGTCAGCGCCGCAGAAAGTCTG        <  SRR4302543.3047346/94‑1 (MQ=60)
                                                                                        TTACACCCTTCCGTGCAAGGACTGCGTCTGTTTGAAGAAGTGCAACGATCCTGGTACGGACTGGATCGCATTGTCAGCGCCGCAGAAAGTCTGC       <  SRR4302543.5823993/94‑1 (MQ=60)
                                                                                         TACACCCTACCGTGCAAGGACTGCGTCTGTTTGAAGAAGTGCAACGATCCTGGTACGGACTGGATCGCATTGTCAGCGCCGCAGAAAGTCTGCG      <  SRR4302543.7973623/94‑1 (MQ=60)
                                                                                          ACACCCTACCGTGCAAGGACTGCGTCTGTTTGAAGAAGTGCAACGATCCTGGTACGGACTGGATCGCATTGTCAGCGCCGCAGAAAGTCTGCGC     >  SRR4302543.3798313/1‑94 (MQ=60)
                                                                                          ACACCCTACCGTGCAAGGACTGCGTCTGTTTGAAGAAGTGCAACGATCCTGGTACGGACTGGATCGCATTGTCAGCGCCGCAGAAAGTCTGCGC     >  SRR4302543.8009361/1‑94 (MQ=60)
                                                                                          ACACCCTACCGTGCAAGGACTGCGTCTGTTTGAAGAAGTGCAACGATCCTGGTACGGACTGGATCGCATTGTCAGCGCCGCAGAAAGTCTGCGC     >  SRR4302543.6096765/1‑94 (MQ=60)
                                                                                            ACCCTACCGTGCAAGGACTGCGTCTGTTTGAAGAAGTGCAACGATCCTGGTACGGACTGGATCGCATTGTCAGCGCCGCAGAAAGTCTGCGCGA   >  SRR4302543.6559267/1‑94 (MQ=60)
                                                                                            ACCCTACCGTGCAAGGACTGCGTCTGTTTGAAGAAGTGCAACGATCCTGGTACGGACTGGATCGCATTGTCAGCGCCGCAGAAAGTCTGCGCGA   >  SRR4302543.3508338/1‑94 (MQ=60)
                                                                                             CCCTACCGTGCAAGGACTGCGTCTGTTTGAAGAAGTGCAACGATCCTGGTACGGACTGGATCGCATTGTCAGCGCCGCAGAAAGTCTGCGCGAG  >  SRR4302543.7222777/1‑94 (MQ=60)
                                                                                             |                                                                                             
ACACACCTCACAGCCAACCGTCAGCCGCGAACTTGCGCGCTTTGAGAAGGTGATCGGGCTGAAATTGTTTGAGCGCGTACGTGGGCGATTACATCCTACCGTGCAAGGACTGCGTCTGTTTGAAGAAGTGCAACGATCCTGGTACGGACTGGATCGCATTGTCAGCGCCGCAGAAAGTCTGCGCGAG  >  NC_000913/2977126‑2977312

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 2 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑