Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A1 F1 I1 R1 1696 279.3 15874187 97.8% 15524954 93.0

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 3,019,825 G→A P163P (CCG→CCA)  b2881 → putative dehydrogenase

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009133,019,8250GA100.0% 1262.3 / NA 352P163P (CCG→CCA) b2881putative dehydrogenase
Reads supporting (aligned to +/- strand):  ref base G (0/0);  new base A (159/193);  total (159/193)

Only 100 of 359 total aligned reads displayed.

CCGCGATGCTGGCTGGCAGCAATACTATCAGGTCATTGAACTGGCGGTTGCACGTAAAAATAATCCGCAGGCCACCATTGATATCGCTCCGACTTTCCGTGACGACCTAGAAGTCATTGGTAAGCATTATCCTAAAACTGATGCCGCGAAAATGGTGCAGGCGAAACCCTGCTATGTTGA  >  NC_000913/3019735‑3019914
                                                                                          |                                                                                         
ccGCGATGCTGGCTGGCAGCAATACTATCAGGTCATTGAACTGGCGGTTGCACGTAAAAATAATCCGCAGGCCACCATTGATATCGCTCCAAc                                                                                         <  1:4948337/93‑1 (MQ=255)
 cgcgATGCTGGCTGGCAGCAATACTATCAGGTCATTGAACTGGCGGTTGCACGTAAAAATAATCCGCAGGCCACCATTGATATCGCTCCAACt                                                                                        >  2:2094803/1‑93 (MQ=255)
 cgcgATGCTGGCTGGCAGCAATACTATCAGGTCATTGAACTGGCGGTTGCACGTAAAAATAATCCGCAGGCCACCATTGATATCGCTCCAACt                                                                                        <  2:6007919/93‑1 (MQ=255)
  gcgATGCTGGCTGGCAGCAATACTATCAGGTCATTGAACTGGCGGTTGCACGTAAAAATAATCCGCAGGCCACCATTGATATCGCTCCAACtt                                                                                       <  1:7327582/93‑1 (MQ=255)
     aTGCTGGCTGGCAGCAATACTATCAGGTCATTGAACTGGCGGTTGCACGTAAAAATAATCCGCAGGCCACCATTGATATCGCTCCAACTTTcc                                                                                    <  1:5688226/93‑1 (MQ=255)
     aTGCTGGCTGGCAGCAATACTATCAGGTCATTGAACTGGCGGTTGCACGTAAAAATAATCCGCAGGCCACCATTGATATCGCTCCAACTTTcc                                                                                    >  1:2694902/1‑93 (MQ=255)
      tGCTGGCTGGCAGCAATACTATCAGGTCATTGAACTGGCGGTTGCACGTAAAAATAATCCGCAGGCCACCATTGATATCGCTCCAACTTTCCg                                                                                   >  2:3565001/1‑93 (MQ=255)
       gctggctgGCAGCAATACTATCAGGTCATTGAACTGGCGGTTGCACGTAAAAATAATCCGCAGGCCACCATTGATATCGCTCCAACTTTCCGt                                                                                  <  1:6702138/93‑1 (MQ=255)
         tggctggcAGCAATACTATCAGGTCATTGAACTGGCGGTTGCACGTAAAAATAATCCGCAGGCCACCATTGATATCGCTCCAACTTTCCGTga                                                                                <  2:7222275/93‑1 (MQ=255)
          ggctggcAGCAATACTATCAGGTCATTGAACTGGCGGTTGCACGTAAAAATAATCCGCAGGCCACCATTGATATCGCTCCAACTTTCCGTgac                                                                               <  2:6240874/93‑1 (MQ=255)
            ctggcAGCAATACTATCAGGTCATTGAACTGGCGGTTGCACGTAAAAATAATCCGCAGGCCACCATTGATATCGCTCCAACTTTCCGTgacga                                                                             >  1:453773/1‑93 (MQ=255)
             tggcAGCAATACTATCAGGTCATTGAACTGGCGGTTGCACGTAAAAATAATCCGCAGGCCACCATTGATATCGCTCCAACTTTCCGTgacgac                                                                            <  1:6234978/93‑1 (MQ=255)
              ggcAGCAATACTATCAGGTCATTGAACTGGCGGTTGCACGTAAAAATAATCCGCAGGCCACCATTGATATCGCTCCAACTTTCCGTGACGAcc                                                                           >  2:5774725/1‑93 (MQ=255)
               gcagcaATACTATCAGGTCATTGAACTGGCGGTTGCACGTAAAAATAATCCGCAGGCCACCATTGATATCGCTCCAACTTTCCGTGACGACCt                                                                          <  2:1363959/93‑1 (MQ=255)
               gcagcaATACTATCAGGTCATTGAACTGGCGGTTGCACGTAAAAATAATCCGCAGGCCACCATTGATATCGCTCCAACTTTCCGTGACGACCt                                                                          <  1:680946/93‑1 (MQ=255)
               gcagcaATACTATCAGGTCATTGAACTGGCGGTTGCACGTAAAAATAATCCGCAGGCCACCATTGATATCGCTCCAACTTTCCGTGACGACCt                                                                          >  1:7853194/1‑93 (MQ=255)
                cagcaATACTATCAGGTCATTGAACTGGCGGTTGCACGTAAAAATAATCCGCAGGCCACCATTGATATCGCTCCAACTTTCCGTGACGACCTa                                                                         >  1:302353/1‑93 (MQ=255)
                cagcaATACTATCAGGTCATTGAACTGGCGGTTGCACGTAAAAATAATCCGCAGGCCACCATTGATATCGCTCCAACTTTCCGTGACGACCTa                                                                         >  1:5532747/1‑93 (MQ=255)
                cagcaATACTATCAGGTCATTGAACTGGCGGTTGCACGTAAAAATAATCCGCAGGCCACCATTGATATCGCTCCAACTTTCCGTGACGACCTa                                                                         <  1:1560435/93‑1 (MQ=255)
                cagcaATACTATCAGGTCATTGAACTGGCGGTTGCACGTAAAAATAATCCGCAGGCCACCATTGATATCGCTCCAACTTTCCGTGACGACCTa                                                                         <  1:7126777/93‑1 (MQ=255)
                  gcaATACTATCAGGTCATTGAACTGGCGGTTGCACGTAAAAATAATCCGCAGGCCACCATTGATATCGCTCCAACTTTCCGTGACGACCTAGa                                                                       >  2:1089528/1‑93 (MQ=255)
                  gcaATACTATCAGGTCATTGAACTGGCGGTTGCACGTAAAAATAATCCGCAGGCCACCATTGATATCGCTCCAACTTTCCGTGACGACCTAGa                                                                       >  1:6039553/1‑93 (MQ=255)
                   caATACTATCAGGTCATTGAACTGGCGGTTGCACGTAAAAATAATCCGCAGGCCACCATTGATATCGCTCCAACTTTCCGTGACGACCTAGaa                                                                      <  1:4271037/93‑1 (MQ=255)
                   caATACTATCAGGTCATTGAACTGGCGGTTGCACGTAAAAATAATCCGCAGGCCACCATTGATATCGCTCCAACTTTCCGTGACGACCTAGaa                                                                      <  2:3390644/93‑1 (MQ=255)
                   caATACTATCAGGTCATTGAACTGGCGGTTGCACGTAAAAATAATCCGCAGGCCACCATTGATATCGCTCCAACTTTCCGTGACGACCTAGaa                                                                      <  2:2469757/93‑1 (MQ=255)
                   aaaTACTATCAGGTCATTGAACTGGCGGTTGCACGTAAAAATAATCCGCAGGCCACCATTGATATCGCTCCAACTTTCCGTGACGACCTAGaa                                                                      <  1:2294553/92‑1 (MQ=255)
                      tACTATCAGGTCATTGAGCTGGCGGTTCCACGTAAAAATAATCCGCAGGCCACCATTGATATCGCTCCAACTTTCCGTGACGACCTAGAAGTc                                                                   <  1:416345/93‑1 (MQ=255)
                      tACTATCAGGTCATTGAACTGGCGGTTGCACGTAAAAATAATCCGCAGGCCACCATTGATATCGCTCCAACTTTCCGTGACGACCTAGAAGTc                                                                   >  1:935866/1‑93 (MQ=255)
                       aCTATCAGGTCATTGAACTGGCGGTTGCACGTAAAAATAATCCGCAGGCCACCATTGATATCGCTCCAACTTTCCGTGACGACCTAGAAGTCa                                                                  <  1:6340185/93‑1 (MQ=255)
                       aCTATCAGGTCATTGAACTGGCGGTTGCACGTAAAAATAATCCGCAGGCCACCATTGATATCGCTCCAACTTTCCGTGACGACCTAGAAGTCa                                                                  <  1:5454463/93‑1 (MQ=255)
                        cTATCAGGTCATTGAACTGGCGGTTGCACGTAAAAATAATCCGCAGGCCACCATTGATATCGCTCCAACTTTCCGTGACGCCCTAGAAGTCAt                                                                 <  2:4799207/93‑1 (MQ=255)
                        cTATCAGGTCATTGAACTGGCGGTTGCACGTAAAAATAATCCGCAGGCCACCATTGATATCGCTCCAACTTTCCGTGACGACCTAGAAGTCAt                                                                 <  2:4494693/93‑1 (MQ=255)
                         tATCAGGTCATTGAACTGGCGGTTGCACGTAAAAATAATCCGCAGGCCACCATTGATATCGCTCCAACTTTCCGTGACGACCTAGAAGTCAtt                                                                <  1:3630572/93‑1 (MQ=255)
                          aTCAGGTCATTGAACTGGCGGTTGCACGTAAAAATAATCCGCAGGCCACCATTGATATCGCTCCAACTTTCCGTGACGACCTAGAAGTCATTg                                                               <  2:4939516/93‑1 (MQ=255)
                           tCAGGTCATTGAACTGGCGGTTGCACGTAAAAATAATCCGCAGGCCACCATTGATATCGCTCCAACTTTCCGTGACGACCTAGAAGTCATTgg                                                              >  2:3060145/1‑93 (MQ=255)
                             aGGTCATTGAACTGGCGGTTGCACGTAAAAATAATCCGCAGGCCACCATTGATATCGCTCCAACTTTCCGTGACGACCTAGAAGTCATTGGTa                                                            <  2:104931/93‑1 (MQ=255)
                               gTCATTGAACTGGCGGTTGCACGTAAAAATAATCCGCAGGCCACCATTGATATCGCTCCAACTTTCCGTGACGACCTAGAAGTCATTGGTAAg                                                          <  1:3850805/93‑1 (MQ=255)
                                tCATTGAACTGGCGGTTGCACGTAAAAATAATCCGCAGGCCACCATTGATATCGCTCCAACTTTCCGTGACGACCTAGAAGTCATTGGTAAGc                                                         >  2:7515773/1‑93 (MQ=255)
                                tCATTGAACTGGCGGTTGCACGTAAAAATAATCCGCAGGCCACCATTGATATCGCTCCAACTTTCCGTGACGACCTAGAAGTCATTGGTAAGc                                                         >  1:876842/1‑93 (MQ=255)
                                   ttGAACTGGCGGTTGCACGTAAAAATAATCCGCAGGCCACCATTGATATCGCTCCAACTTTCCGTGACGACCTAGAAGTCATTGGTAAGCAtt                                                      >  2:3366093/1‑93 (MQ=255)
                                    tGAACTGGCGGTTGCACGTAAAAATAATCCGCAGGCCACCATTGATATCGCTCCAACTTTCCGTGACGACCTAGAAGTCATTGGTAAGCATTa                                                     <  2:1561122/93‑1 (MQ=255)
                                    tGAACTGGCGGTTGCACGTAAAAATAATCCGCAGGCCACCATTGATATCGCTCCAACTTTCCGTGACGACCTAGAAGTCATTGGTAAGCATTa                                                     <  2:3538364/93‑1 (MQ=255)
                                    tGAACTGGCGGTTGCACGTAAAAATAATCCGCAGGCCACCATTGATATCGCTCCAACTTTCCGTGACGACCTAGAAGTCATTGGTAAGCATTa                                                     <  2:2577031/93‑1 (MQ=255)
                                    tGAACTGGCGGTTGCACGTAAAAATAATCCGCAGGCCACCATTGATATCGCTCCAACTTTCCGTGACGACCTAGAAGTCATTGGTAAGCATTa                                                     <  1:145780/93‑1 (MQ=255)
                                    tGAACTGGCGGTTGCACGTAAAAATAATCCGCAGGCCACCATTGATATCGCTCCAACTTTCCGTGACGACCTAGAAGTCATTGGTAAGCATTa                                                     <  2:3850461/93‑1 (MQ=255)
                                     gAACTGGCGGTTGCACGTAAAAATAATCCGCAGGCCACCATTGATATCGCTCCAACTTTCCGTGACGACCTAGAAGTCATTGGTAAGCATTAt                                                    <  2:6693041/93‑1 (MQ=255)
                                      aaCTGGCGGTTGCACGTAAAAATAATCCGCAGGCCACCATTGATATCGCTCCAACTTTCCGTGACGACCTAGAAGTCATTGGTAAGCATTATc                                                   <  1:4581967/93‑1 (MQ=255)
                                      aaCTGGCGGTTGCACGTAAAAATAATCCGCAGGCCACCATTGATATCGCTCCAACTTTCCGTGACGACCTAGAAGTCATTGGTAAGCATTATc                                                   <  1:3427691/93‑1 (MQ=255)
                                       aCTGGCGGTTGCACGTAAAAATAATCCGCAGGCCACCATTGATATCGCTCCAACTTTCCGTGACGACCTAGAAGTCATTGGTAAGCATTATcc                                                  <  2:4769313/93‑1 (MQ=255)
                                        cTGGCGGTTGCACGTAAAAATAATCCGCAGGCCACCATTGATATCGCTCCAACTTTCCGTGACGACCTAGAAGTCATTGGTAAGCATTATCCt                                                 <  2:4259898/93‑1 (MQ=255)
                                        cTGGCGGTTGCACGTAAAAATAATCCGCAGGCCACCATTGATATCGCTCCAACTTTCCGTGACGACCTAGAAGTCATTGGTAAGCATTATCCt                                                 >  2:4329588/1‑93 (MQ=255)
                                         tGGCGGTTGCACGTAAAAATAATCCGCAGGCCACCATTGATATCGCTCCAACTTTCCGTGACGACCTAGAAGTCATTGGTAAGCATTATCCTa                                                >  1:5273720/1‑93 (MQ=255)
                                          ggCGGTTGCACGTAAAAATAATCCGCAGGCCACCATTGATATCGCTCCAACTTTCCGTGACGACCTAGAAGTCATTGGTAAGCATTATCCTaa                                               <  1:1081412/93‑1 (MQ=255)
                                          ggCGGTTGCACGTAAAAATAATCCGCAGGCCACCATTGATATCGCTCCAACTTTCCGTGACGACCTAGAAGTCATTGGTAAGCATTATCCTaa                                               >  1:4787636/1‑93 (MQ=255)
                                           gCGGTTGCACGTAAAAATAATCCGCAGGCCACCATTGATATCGCTCCAACTTTCCGTGACGACCTAGAAGTCATTGGTAAGCATTATCCTaaa                                              >  2:3117621/1‑93 (MQ=255)
                                            cGGTTGCACGTAAAAATAATCCGCAGGCCACCATTGATATCGCTCCAACTTTCCGTGACGACCTAGAAGTCATTGGTAAGCATTATCCTaaaa                                             <  1:6524174/93‑1 (MQ=255)
                                             ggTTGCACGTAAAAATAATCCGCAGGCCACCATTGATATCGCTCCAACTTTCCGTGACGACCTAGAAGTCATTGGTAAGCATTATCCTAAAAc                                            <  2:6472062/93‑1 (MQ=255)
                                             ggTTGCACGTAAAAATAATCCGCAGGCCACCATTGATATCGCTCCAACTTTCCGTGACGACCTAGAAGTCATTGGTAAGCATTATCCTAAAAc                                            >  2:2384922/1‑93 (MQ=255)
                                             ggTTGCACGTAAAAATAATCCGCAGGCCACCATTGATATCGCTCCAACTTTCCGTGACGACCTAGAAGTCATTGGTAAGCATTATCCTAAAAc                                            <  1:1291758/93‑1 (MQ=255)
                                              gTTGCACGTAAAAATAATCCGCAGGCCACCATTGATATCGCTCCAACTTTCCGTGACGACCTAGAAGTCATTGGTAAGCATTATCCTAAAACt                                           >  1:7022189/1‑93 (MQ=255)
                                               ttGCACGTAAAAATAATCCGCAGGCCACCATTGATATCGCTCCAACTTTCCGTGACGACCTAGAAGTCATTGGTAAGCATTATCCTAAAACTg                                          >  1:1821184/1‑93 (MQ=255)
                                                tGCACGTAAAAATAATCCGCAGGCCACCATTGATATCGCTCCAACTTTCCGTGACGACCTAGAAGTCATTGGTAAGCATTATCCTAAAACTGa                                         >  1:5901955/1‑93 (MQ=255)
                                                tGCACGTAAAAATAATCCGCAGGCCACCATTGATATCGCTCCAACTTTCCGTGACGACCTAGAAGTCATTGGTAAGCATTATCCTAAAACTGa                                         <  2:3699143/93‑1 (MQ=255)
                                                tGCACGTAAAAATAATCCGCAGGCCACCATTGATATCGCTCCAACTTTCCGTGACGACCTAGAAGTCATTGGTAAGCATTATCCTAAAACTGa                                         <  1:3969237/93‑1 (MQ=255)
                                                tGCACGTAAAAATAATCCGCAGGCCACCATTGATATCGCTCCAACTTTCCGTGACGACCTAGAAGTCATTGGTAAGCATTATCCTAAAACTGa                                         <  2:5460343/93‑1 (MQ=255)
                                                tGCACGTAAAAATAATCCGCAGGCCACCATTGATATCGCTCCAACTTTCCGTGACGACCTAGAAGTCATTGGTAAGCATTATCCTAAAACTGa                                         <  2:2704838/93‑1 (MQ=255)
                                                tGCACGTAAAAATAATCCGCAGGCCACCATTGATATCGCTCCAACTTTCCGTGACGACCTAGAAGTCATTGGTAAGCATTATCCTAAAACTGa                                         >  1:7761981/1‑93 (MQ=255)
                                                   aCGTAAAAATAATCCGCAGGCCACCATTGATATCGCTCCAACTTTCCGTGACGGCCTAGAAGTCATTGGTAAGCATTATCCTAAAACTGATGc                                      <  1:2134943/93‑1 (MQ=255)
                                                   aCGTAAAAATAATCCGCAGGCCACCATTGATATCGCTCCAACTTTCCGTGACGACCTAGAAGTCATTGGTAAGCATTATCCTAAAACTGATGc                                      <  1:112565/93‑1 (MQ=255)
                                                   aCGTAAAAATAATCCGCAGGCCACCATTGATATCGCTCCAACTTTCCGTGACGACCTAGAAGTCATTGGTAAGCATTATCCTAAAACTGATGc                                      >  1:4061957/1‑93 (MQ=255)
                                                   aCGTAAAAATAATCCGCAGGCCACCATTGATATCGCTCCAACTTTCCGTGACGACCTAGAAGTCATTGGTAAGCATTATCCTAAAACTGATGc                                      >  1:573973/1‑93 (MQ=255)
                                                    cGTAAAAATAATCCGCAGGCCACCATTGATATCGCTCCAACTTTCCGTGACGACCTAGAAGTCATTGGTAAGCATTATCCTAAAACTGATGcc                                     >  1:2403204/1‑93 (MQ=255)
                                                    cGTAAAAATAATCCGCAGGCCACCATTGATATCGCTCCAACTTTCCGTGACGACCTAGAAGTCATTGGTAAGCATTATCCTAAAACTGATGcc                                     <  2:1767294/93‑1 (MQ=255)
                                                        aaaaTAATCCGCAGGCCACCATTGATATCGCTCCAACTTTCCGTGACGACCTAGAAGTCATTGGTAAGCATTATCCTAAAACTGATGCCGCGa                                 >  2:7887386/1‑93 (MQ=255)
                                                         aaaTAATCCGCAGGCCACCATTGATATCGCTCCAACTTTCCGTGACGACCTAGAAGTCATTGGTAAGCATTATCCTAAAACTGATGCCGCGaa                                >  1:2194898/1‑93 (MQ=255)
                                                           ataatCCGCAGGCCACCATTGATATCGCTCCAACTTTCCGTGACGACCTAGAAGTCATTGGTAAGCATTATCCTAAAACTGATGCCGCGaaaa                              >  2:7604688/1‑93 (MQ=255)
                                                           ataatCCGCAGGCCACCATTGATATCGCTCCAACTTTCCGTGACGACCTAGAAGTCATTGGTAAGCATTATCCTAAAACTGATGCCGCGaaaa                              <  1:5145672/93‑1 (MQ=255)
                                                               tCCGCAGGCCACCATTGATATCGCTCCAACTTTCCGTGACGACCTAGAAGTCATTGGTAAGCATTATCCTAAAACTGATGCCGCGAAAATGGt                          <  2:7381497/93‑1 (MQ=255)
                                                               tCCGCAGGCCACCATTGATATCGCTCCAACTTTCCGTGACGACCTAGAAGTCATTGGTAAGCATTATCCTAAAACTGATGCCGCGAAAATGGt                          <  1:2928626/93‑1 (MQ=255)
                                                                  gCAGGCCACCATTGATATCGCTCCAACTTTCCGTGACGACCTAGAAGTCATTGGTAAGCATTATCCTAAAACTGATGCCGCGAAAATGGTGCa                       <  1:812024/93‑1 (MQ=255)
                                                                  gCAGGCCACCATTGATATCGCTCCAACTTTCCGTGACGACCTAGAAGTCATTGGTAAGCATTATCCTAAAACTGATGCCGCGAAAATGGTGCa                       <  2:2888211/93‑1 (MQ=255)
                                                                     ggCCACCATTGATATCGCTCCAACTTTCCGTGACGACCTAGAAGTCATTGGTAAGCATTATCCTAAAACTGATGCCGCGAAAATGGTGCAGGc                    <  2:5231292/93‑1 (MQ=255)
                                                                         accaTTGATATCGCTCCAACTTTCCGTGACGACCTAGAAGTCATTGGTAAGCATTATCCTAAAACTGATGCCGCGAAAATGGTGCAGGCGaaa                >  2:1943565/1‑93 (MQ=255)
                                                                         accaTTGATACCGCTCCAACTTTCCGTGACGACCTAGAAGTCATTGGTAAGCATTATACTAAAACTGATTCCGCGAAAATGGCGCAGGCGaaa                >  2:2122258/1‑93 (MQ=255)
                                                                           caTTGATATCGCTCCAACTTTCCGTGACGACCTAGAAGTCATTGGTAAGCATTATCCTAAAACTGATGCCGCGAAAATGGTGCAGGCGAAAcc              >  1:1955787/1‑93 (MQ=255)
                                                                           caTTGATATCGCTCCAACTTTCCGTGACGACCTAGAAGTCATTGGTAAGCATTATCCTAAAACTGATGCCGCGAAAATGGTGCAGGCGAAAcc              >  2:7780703/1‑93 (MQ=255)
                                                                           caTTGATATCGCTCCAACTTTCCGTGACGACCTAGAAGTCATTGGTAAGCATTAACCTAAAACTGATGCCGCGAAAATGGTGCAGGCGAAAcc              >  1:3247178/1‑93 (MQ=255)
                                                                            aTTGATATCGCTCCAACTTTCCGTGACGACCTAGAAGTCATTGGTAAGCATTATCCTAAAACTGATGCCGCGAAAATGGTGCAGGCGAAAccc             >  2:2780032/1‑93 (MQ=255)
                                                                             ttGATATCGCTCCAACTTTCCGTGACGACCTAGAAGTCATTGGTAAGCATTATCCTAAAACTGATGCCGCGAAAATGGTGCAGGCGAAACCCt            <  1:3724505/93‑1 (MQ=255)
                                                                             ttGATATCGCTCCAACTTTCCGTGACGACCTAGAAGTCATTGGTAAGCATTATCCTAAAACTGATGCCGCGAAAATGGTGCAGGCGAAACCCt            >  1:2854224/1‑93 (MQ=255)
                                                                             ttGATATCGCTCCAACTTTCCGTGACGACCTAGAAGTCATTGGTAAGCATTATCCTAAAACTGATGCCGCGAAAATGGTGCAGGCGAAACCCt            <  1:769727/93‑1 (MQ=255)
                                                                             ttGATATCGCTCCAACTTTCCGTGACGACCTAGAAGTCATTGGTAAGCATTATCCTAAAACTGATGCCGCGAAAATGGTGCAGGCGAAACCCt            <  2:3756610/93‑1 (MQ=255)
                                                                               gATATCGCTCCAACTTTCCGTGACGACCTAGAAGTCATTGGTAAGCATTATCCTAAAACTGATGCCGCGAAAATGGTGCAGGCGAAACCCTGc          <  1:760938/93‑1 (MQ=255)
                                                                                 tatCGCTCCAACTTTCCGTGACGACCTAGAAGTCATTGGTAAGCATTATCCTAAAACTGATGCCGCGAAAATGGTGCAGGCGAAACCCTGCTa        <  2:3209056/93‑1 (MQ=255)
                                                                                 tatCGCTCCAACTTTCCGTGACGACCTAGAAGTCATTGGTAAGCATTATCCTAAAACTGATGCCGCGAAAATGGTGCAGGCGAAACCCTGCTa        >  1:7408721/1‑93 (MQ=255)
                                                                                    cGCTCCAACTTTCCGTGACGACCTAGAAGTCATTGGTAAGCATTATCCTAAAACTGATGCCGCGAAAATGGTGCAGGCGAAACCCTGCTATGt     <  1:253642/93‑1 (MQ=255)
                                                                                    cGCTCCAACTTTCCGTGACGACCTAGAAGTCATTGGTAAGCATTATCCTAAAACTGATGCCGCGAAAATGGTGCAGGCGAAACCCTGCTATGt     <  2:6768365/93‑1 (MQ=255)
                                                                                     gCTCCAACTTTCCGTGACGACCTAGAAGTCATTGGTAAGCATTATCCTAAAACTGATGCCGCGAAAATGGTGCAGGCGAAACCCTGCTATGtt    >  2:6880629/1‑93 (MQ=255)
                                                                                       tCCAACTTTCCGTGACGACCTAGAAGTCATTGGTAAGCATTATCCTAAAACTGATGCCGCGAAAATGGTGCAGGCGAAACCCTGCTATGTTGa  <  1:7533482/93‑1 (MQ=255)
                                                                                       tCCAACTTTCCGTGACGACCTAGAAGTCATTGGTAAGCATTATCCTAAAACTGATGCCGCGAAAATGGTGCAGGCGAAACCCTGCTATGTTGa  <  2:4189924/93‑1 (MQ=255)
                                                                                          |                                                                                         
CCGCGATGCTGGCTGGCAGCAATACTATCAGGTCATTGAACTGGCGGTTGCACGTAAAAATAATCCGCAGGCCACCATTGATATCGCTCCGACTTTCCGTGACGACCTAGAAGTCATTGGTAAGCATTATCCTAAAACTGATGCCGCGAAAATGGTGCAGGCGAAACCCTGCTATGTTGA  >  NC_000913/3019735‑3019914

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

BRESEQ :: bam2aln output Only 200 of 204 total aligned reads displayed.
CAGCCGCGATGCTGGCTGGCAGCAATACTATCAGGTCATTGAACTGGCGGTTGCACGTAAAAATAATCCGCAGGCCACCATTGATATCGCTCCGACTTTCCGTGACGACCTAGAAGTCATTGGTAAGCATTATCCTAAAACTGATGCCGCGAAAATGGTGCAGGCGAAACCCTGCTATGTTGAAGAC  >  NC_000913/3019732‑3019918
                                                                                             |                                                                                             
CAGCCGCGATGCTGGCTGGCAGCAATACTATCAGGTCATTGAACTGGCGGTTGCACGTAAAAATAATCCGCAGGCCACCATTGATATCGCTCCA                                                                                               <  SRR4302543.1485500/94‑1 (MQ=60)
 AGCCGCGATGCTGGCTGGCAGCAATACTATCAGGTCATTGAACTGGCGGTTGCACGTAAAAATAATCCGCAGGCCACCATTTATATCGCTCCAA                                                                                              >  SRR4302543.1262992/1‑94 (MQ=60)
 AGCCGCGATGCTGGCTGGCAGCAATACTATCAGGTCATTGAACTGGCGGTTGCACGTAAAAATAATCCGCAGGCCACCATTGATATCGCTCCAA                                                                                              >  SRR4302543.431149/1‑94 (MQ=60)
   CCGCGATGCTGGCTGGCAGCAATACTATCAGGTCATTGAACTGGCGGTTGCACGTAAAAATAATCCGCAGGCCACCATTGATATCGCTCCAACT                                                                                            <  SRR4302543.4993397/94‑1 (MQ=60)
   CCGCGATGCTGGCTGGCAGCAATACTATCAGGTCATTGAACTGGCGGTTGCACGTAAAAATAATCCGCAGGCCACCATTGATATCGCTCCAACT                                                                                            <  SRR4302543.1342742/94‑1 (MQ=60)
    CGCGATGCTGGCTGGCAGCAATACTATCAGGTCATTGAACTGGCGGTTGCACGTAAAAATAATCCGCAGGCCACCATTGATATCGCTCCAACTT                                                                                           >  SRR4302543.2167636/1‑94 (MQ=60)
    CGCGATGCTGGCTGGCAGCAATACTATCAGGTCATTGAACTGGCGGTTGCACGTAAAAATAATCCGCAGGCCACCATTGATATCGCTCCAACTT                                                                                           >  SRR4302543.2532528/1‑94 (MQ=60)
    CGCGATGCTGGCTGGCAGCAATACTATCAGGTCATTGAACTGGCGGTTGCACGTAAAAATAATCCGCAGGCCACCATTGATATCGCTCCAACTT                                                                                           >  SRR4302543.781624/1‑94 (MQ=60)
     GCGATGCTGGCTGGCAGCAATACTATCAGGTCATTGAACTGGCGGTTGCACGTAAAAATAATCCGCAGGCCACCATTGATATCGCTCCAACTTT                                                                                          >  SRR4302543.6537263/1‑94 (MQ=60)
     GCGATGCTGGCTGGCAGCAATACTATCAGGTCATTGAACTGGCGGTTGCACGTAAAAATAATCCGCAGGCCACCATTGATATCGCTCCAACTTT                                                                                          <  SRR4302543.7398123/94‑1 (MQ=60)
     GCGATGCTGGCTGGCAGCAATACTATCAGGTCATTGAACTGGCGGTTGCACGTAAAAATAATCCGCAGGCCACCATTGATATCCCTCCAACTTT                                                                                          >  SRR4302543.1894425/1‑94 (MQ=60)
      CGATGCTGGCTGGCAGCAATACTATCAGGTCATTGAACTGGCGGTTGCACGTAAAAATAATCCGCAGGCCACCATTGATATCGCTCCAACTTTC                                                                                         >  SRR4302543.1489496/1‑94 (MQ=60)
       GATGCTGGCTGGCAGCAATACTATCAGGTCATTGAACTGGCGGTTGCACGTAAAAATAATCCGCAGGCCACCATTGATATCGCTCCAACTTTCC                                                                                        >  SRR4302543.2719337/1‑94 (MQ=60)
       GATGCTGGCTGGCAGCAATACTATCAGGTCATTGAACTGGCGGTTGCACGTAAAAATAATCCGCAGGCCACCATTGATATCGCTCCAACTTTCC                                                                                        <  SRR4302543.2655828/94‑1 (MQ=60)
       GATGCTGGCTGGCAGCAATACTATCAGGTCATTGAACTGGCGGTTGCACGTAAAAATAATCCGCAGGCCACCATTGATATCGCTCCAACTTTCC                                                                                        >  SRR4302543.6662412/1‑94 (MQ=60)
       GATGCTGGCTGGCAGCAATACTATCAGGTCATTGAACTGGCGGTTGCACGTAAAAATAATCCGCAGGCCACCATTGATATCGCTCCAACTTTCC                                                                                        >  SRR4302543.2593720/1‑94 (MQ=60)
       GATGCTGGCTGGCAGCAATACTATCAGGTCATTGAACTGGCGGTTGCACGTAAAAATAATCCGCAGGCCACCATTGATATCGCTCCAACTTTCC                                                                                        >  SRR4302543.2275427/1‑94 (MQ=60)
       GATGCTGGCTGGCAGCAATACTATCAGGTCATTGAACTGGCGGTTGCACGTAAAAATAATCCGCAGGCCACCATTGATATCGCTCCAACTTTCC                                                                                        >  SRR4302543.7915883/1‑94 (MQ=60)
        ATGCTGGCTGGCAGCAATACTATCAGGTCATTGAACTGGCGGTTGCACGTAAAAATAATCCGCAGGCCACCATTGATATCGCTCCAACTTTCCG                                                                                       <  SRR4302543.5740139/94‑1 (MQ=60)
        ATGCTGGCTGGCAGCAATACTATCAGGTCATTGAACTGGCGGTTGCACGTAAAAATAATCCGCAGGCCACCATTGATATCGCTCCAACTTTCCG                                                                                       <  SRR4302543.4955548/94‑1 (MQ=60)
            TGGCTGGCAGCAATACTATCAGGTCATTGAACTGGCGGTTGCACGTAAAAATAATCCGCAGGCCACCATTGATATCGCTCCAACTTTCCGTGAC                                                                                   <  SRR4302543.1916949/94‑1 (MQ=60)
            TGGCTGGCAGCAATACTATCAGGTCATTGAACTGGCGGTTGCACGTAAAAATAATCCGCAGGCCACCATTGATATCGCTCCAACTTTCCGTGAC                                                                                   >  SRR4302543.5531395/1‑94 (MQ=60)
            TGGCTGGCAGCAATACTATCAGGTCATTGAACTGGCGGTTGCACGTAAAAATAATCCGCAGGCCACCATTGATATCGCTCCAACTTTCCGTGAC                                                                                   <  SRR4302543.2328415/94‑1 (MQ=60)
            TGGCTGGCAGCAATACTATCAGGTCATTGAACTGGCGGTTGCACGTAAAAATAATCCGCAGGCCACCATTGATATCGCTCCAACTTTCCGTGAC                                                                                   >  SRR4302543.1524133/1‑94 (MQ=60)
            TGGCTGGCAGCAATACTATCAGGTCATTGAACTGGCGGTTGCACGTAAAAATAATCCGCAGGCCACCATTGATATCGCTCCAACTTTCCGTGAC                                                                                   >  SRR4302543.292254/1‑94 (MQ=60)
            TGGCTGGCAGCAATACTATCAGGTCATTGAACTGGCGGTTGCACGTAAAAATAATCCGCAGGCCACCATTGATATCGCTCCAACTTTCCGTGAC                                                                                   <  SRR4302543.3263717/94‑1 (MQ=60)
             GGCTGGCAGCAATACTATCAGGTCATTGAACTGGCGGTTGCACGTAAAAATAATCCGCAGGCCACCATTGATATCGCTCCAACTTTCCGTGACG                                                                                  <  SRR4302543.7173177/94‑1 (MQ=60)
             GGCTGGCAGCAATACTATCAGGTCATTGAACTGGCGGTTGCACGTAAAAATAATCCGCAGGCCACCATTGATATCGCTCCAACTTTCCGTGACG                                                                                  <  SRR4302543.4952614/94‑1 (MQ=60)
             GGCTGGCAGCAATACTATCAGGTCATTGAACTGGCGGTTGCACGTAAAAATAATCCGCAGGCCACCATTGATATCGCTCCAACTTTCCGTGACG                                                                                  >  SRR4302543.7658320/1‑94 (MQ=60)
             GGCTGGCAGCAATACTATCAGGTCATTGAACTGGCGGTTGCACGTAAAAATAATCCGCAGGCCACCATTGATATCGCTCCAACTTTCCGTGACG                                                                                  <  SRR4302543.7863848/94‑1 (MQ=60)
              GCTGGCAGCAATACTATCAGGTCATTGAACTGGCGGTTGCACGTAAAAATAATCCGCAGGCCACCATTGATATCGCTCCAACTTTCCGTGACGA                                                                                 >  SRR4302543.458001/1‑94 (MQ=60)
               CTGGCAGCAATACTATCAGGTCATTGAACTGGCGGTTGCACGTAAAAATAATCCGCAGGCCACCATTGATATCGCTCCAACTTTCCGTGACGAC                                                                                <  SRR4302543.657509/94‑1 (MQ=60)
                TGGCAGCAATACTATCAGGTCATTGAACTGGCGGTTGCACGTAAAAATAATCCGCAGGCCACCATTGATATCGCTCCAACTTTCCGTGACGACC                                                                               <  SRR4302543.3214163/94‑1 (MQ=60)
                TGGCAGCAATACTATCAGGTCATTGAACTGGCGGTTGCACGTAAAAATAATCCGCAGGCCACCATTGATATCGCTCCAACTTTCCGTGACGACC                                                                               <  SRR4302543.6293826/94‑1 (MQ=60)
                TGGCAGCAATACTATCAGGTCATTGAACTGGCGGTTGCACGTAAAAATAATCCGCAGGCCACCATTGATATCGCTCCAACTTTCCGTGACGACC                                                                               <  SRR4302543.5398609/94‑1 (MQ=60)
                 TGCAGCAATACTATCAGGTCATTGAACTGGCGGTTGCACGTAAAAATAATCCGCAGGCCACCATTGATATCGCTCCAACTTTCCGTGACGACCT                                                                              <  SRR4302543.834988/94‑1 (MQ=60)
                 GGCAGCAATACTATCAGGTCATTGAACTGGCGGTTGCACGTAAAAATAATCCGCAGGCCACCATTGATATCGCTCCAACTTTCCGTGACGACCT                                                                              >  SRR4302543.7927190/1‑94 (MQ=60)
                 GCCAGCAATACTATCAGGTCATTGAACTGGCGGTTGCACGTAAAAATAATCCGCAGGCCACCATTGATATCGCTCCAACTTTCCGTGACGACCT                                                                              >  SRR4302543.370420/1‑94 (MQ=60)
                  GCAGCAATACTATCAGGTCATTGAACTGGCGGTTGCACGTAAAAATAATCCGCAGGCCACCATTGATATCGCTCCAACTTTCCGTGACGACCTA                                                                             <  SRR4302543.687239/94‑1 (MQ=60)
                  GCAGCAATACTATCAGGTCATTGAACTGGCGGTTGCACGTAAAAATAATCCGCAGGCCACCATTGATATCGCTCCAACTTTCCGTGACGACCTA                                                                             >  SRR4302543.305072/1‑94 (MQ=60)
                  GCAGCAATACTATCAGGTCATTGAACTGGCGGTTGCACGTAAAAATAATCCGCAGGCCACCATTGATATCGCTCCAACTTTCCGTGACGACCTA                                                                             >  SRR4302543.5583021/1‑94 (MQ=60)
                  GCAGCAATACTATCAGGTCATTGAACTGGCGGTTGCACGTAAAAATAATCCGCAGGCCACCATTGATATCGCTCCAACTTTCCGTGACGACCTA                                                                             >  SRR4302543.5583020/1‑94 (MQ=60)
                   CAGCAATACTATCAGGTCATTGAACTGGCGGTTGCACGTAAAAATAATCCGCAGGCCACCATTGATATCGCTCCAACTTTCCGTGACGACCTAG                                                                            >  SRR4302543.519412/1‑94 (MQ=60)
                   CAGCAATACTATCAGGTCATTGAACTGGCGGTTGCACGTAAAAATAATCCGCAGGCCACCATTGATATCGCTCCAACTTTCCGTGACGACCTAG                                                                            >  SRR4302543.7936224/1‑94 (MQ=60)
                   CAGCAATACTATCAGGTCATTGAACTGGCGGTTGCACGTAAAAATAATCCGCAGGCCACCATTGATATCGCTCCAACTTTCCGTGACGACCTAG                                                                            <  SRR4302543.1574369/94‑1 (MQ=60)
                   CAGCAATACTATCAGGTCATTGAACTGGCGGTTGCACGTAAAAATAATCCGCAGGCCACCATTGATATCGCTCCAACTTTCCGTGACGACCTAG                                                                            <  SRR4302543.7196019/94‑1 (MQ=60)
                    AGCAATACTATCAGGTCATTGAACTGGCGGTTGCACGTAAAAATAATCCGCAGGCCACCATTGATATCGCTCCAACTTTCCGTGACGACCTAGA                                                                           >  SRR4302543.6096721/1‑94 (MQ=60)
                    AGCAATACTATCAGGTCATTGAACTGGCGGTTGCACGTAAAAATAATCCGCAGGCCACCATTGATATCGCTCCAACTTTCCGTGACGACCTAGA                                                                           >  SRR4302543.6096720/1‑94 (MQ=60)
                    AGCAATACTATCAGGTCATTGAACTGGCGGTTGCACGTAAAAATAATCCGCAGGCCACCATTGATATCGCTCCAACTTTCCGTGACGACCTAGA                                                                           >  SRR4302543.2066934/1‑94 (MQ=60)
                     GCAATACTATCAGGTCATTGAACTGGCGGTTGCACGTAAAAATAATCCGCAGGCCACCATTGATATCGCTCCAACTTTCCGTGACGACCTAGAA                                                                          <  SRR4302543.781141/94‑1 (MQ=60)
                      CAATACTATCAGGTCATTGAACTGGCGGTTGCACGTAAAAATAATCCGCAGGCCACCATTGATATCGCTCCAACTTTCCGTGACGACCTAGAAG                                                                         <  SRR4302543.7475193/94‑1 (MQ=60)
                      CAATACTATCAGGTCATTGAACTGGCGGTTGCACGTAAAAATAATCCGCAGGCCACCATTGATATCGCTCCAACTTTCCGTGACGACCTAGAAG                                                                         <  SRR4302543.4309850/94‑1 (MQ=60)
                      CAATACTATCAGGTCATTGAACTGGCGGTTGCACGTAAAAATAATCCGCAGGCCACCATTGATATCGCTCCAACTTTCCGTGACGACCTAGAAG                                                                         <  SRR4302543.5036466/94‑1 (MQ=60)
                      CAATACTATCAGGTCATTGAACTGGCGGTTGCACGTAAAAATAATCCGCAGGCCACCATTGATATCGCTCCAACTTTCCGTGACGACCTAGAAG                                                                         <  SRR4302543.2252211/94‑1 (MQ=60)
                      CAATACTATCAGGTCATTGAACTGGCGGTTGCACGTAAAAATAATCCGCAGGCCACCATTGATATCGCTCCAACTTTCCGTGACGACCTAGAAG                                                                         >  SRR4302543.4829744/1‑94 (MQ=60)
                      AAATACTATCAGGTCATTGAACTGGCGGTTGCACGTAAAAATAATCCGCAGGCCACCATTGATATCGCTCCAACTTTCCGTGACGACCTAGAAG                                                                         <  SRR4302543.2315482/94‑1 (MQ=60)
                       AATACTATCAGGTCATTGAACTGGCGGTTGCACGTAAAAATAATCCGCAGGCCACCATTGATATCGCTCCAACTTTCCGTGACGACCTAGAAGT                                                                        >  SRR4302543.2919927/1‑94 (MQ=60)
                       AATACTATCAGGTCATTGAACTGGCGGTTGCACGTAAAAATAATCCGCAGGCCACCATTGATATCGCTCCAACTTTCCGTGACGACCTAGAAGT                                                                        >  SRR4302543.1173981/1‑94 (MQ=60)
                        ATACTATCAGGTCATTGAACTGGCGGTTGCACGTAAAAATAATCCGCAGGCCACCATTGATATCGCTCCAACTTTCCGTGACGACCTAGAAGTC                                                                       >  SRR4302543.944047/1‑94 (MQ=60)
                         TACTATCAGGTCATTGAGCTGGCGGTTCCACGTAAAAATAATCCGCAGGCCACCATTGATATCGCTCCAACTTTCCGTGACGACCTAGAAGTCA                                                                      <  SRR4302543.420235/94‑1 (MQ=60)
                         TACTATCAGGTCATTGAACTGGCGGTTGCACTTAAAAATAATCCGCAGGCCACCATTGATATCGCTCCAACTTTCCGTGACGACCTAGAAGTCA                                                                      <  SRR4302543.6302088/94‑1 (MQ=60)
                         TACTATCAGGTCATTGAACTGGCGGTTGCACGTAAAAATAATCCGCAGGCCACCATTGATATCGCTCCAACTTTCCGTGACGACCTAGAAGTCA                                                                      <  SRR4302543.2974700/94‑1 (MQ=60)
                         TACTATCAGGTCATTGAACTGGCGGTTGCACGTAAAAATAATCCGCAGGCCACCATTGATATCGCTCCAACTTTCCGTGACGACCTAGAAGTCA                                                                      >  SRR4302543.6746689/1‑94 (MQ=60)
                          ACTATCAGGTCATTGAACTGGCGGTTGCACGTAAAAATAATCCGCAGGCCACCATTGATATCGCTCCAACTTTCCGTGACGACCTAGAAGTCAT                                                                     <  SRR4302543.328508/94‑1 (MQ=60)
                          ACTATCAGGTCATTGAACTGGCGGTTGCACGTAAAAATAATCCGCAGGCCACCATTGATATCGCTCCAACTTTCCGTGACGACCTAGAAGTCAT                                                                     <  SRR4302543.5503921/94‑1 (MQ=60)
                          ACTATCAGGTCATTGAACTGGCGGTTGCACGTAAAAATAATCCGCAGGCCACCATTGATATCGCTCCAACTTTCCGTGACGACCTAGAAGTCAT                                                                     <  SRR4302543.934306/94‑1 (MQ=60)
                          ACTATCAGGTCATTGAACTGGCGGTTGCACGTAAAAATAATCCGCAGGCCACCATTGATATCGCTCCAACTTTCCGTGACGACCTAGAAGTCAT                                                                     <  SRR4302543.6399800/94‑1 (MQ=60)
                          ACTATCAGGTCATTGAACTGGCGGTTGCACGTAAAAATAATCCGCAGGCCACCATTGATATCGCTCCAACTTTCCGTGACGACCTAGAAGTCAT                                                                     <  SRR4302543.7286120/94‑1 (MQ=60)
                           CTATCAGGTCATTGAACTGGCGGTTGCACGTAAAAATAATCCGCAGGCCACCATTGATATCGCTCCAACTTTCCGTGACGACCTAGAAGTCATT                                                                    >  SRR4302543.1302697/1‑94 (MQ=60)
                            TATCAGGTCATTGAACTGGCGGTTGCACGTAAAAATAATCCGCAGGCCACCATTGATATCGCTCCAACTTTCCGTGACGACCTAGAAGTCATTG                                                                   <  SRR4302543.410902/94‑1 (MQ=60)
                            TATCAGGTCATTGAACTGGCGGTTGCACGTAAAAATAATCCGCAGGCCACCATTGATATCGCTCCAACTTTCCGTGACGACCTAGAAGTCATTG                                                                   <  SRR4302543.7509054/94‑1 (MQ=60)
                            TATCAGGTCATTGAACTGGCGGTTGCACGTAAAAATAATCCGCAGGCCACCATTGATATCGCTCCAACTTTCCGTGACGACCTAGAAGTCATTG                                                                   <  SRR4302543.3897278/94‑1 (MQ=60)
                            TATCAGGTCATTGAACTGGCGGTTGCACGTAAAAATAATCCGCAGGCCACCATTGATATCGCTCCAACTTTCCGTGACGACCTAGAAGTCATTG                                                                   <  SRR4302543.7746152/94‑1 (MQ=60)
                            TATCAGGTCATTGAACTGGCGGTTGCACGTAAAAATAATCCGCAGGCCACCATTGATATCGCTCCAACTTTCCGTGACGACCTAGAAGTCATTG                                                                   <  SRR4302543.3662536/94‑1 (MQ=60)
                            TATCAGGTCATTGAACTGGCGGTTGCACGTAAAAATAATCCGCAGGCCACCATTGATATCGCTCCAACTTTCCGTGACGACCTAGAAGTCATTG                                                                   >  SRR4302543.3340961/1‑94 (MQ=60)
                            TATCAGGTCATTGAACTGGCGGTTGCACGTAAAAATAATCCGCAGGCCACCATTGATATCGCTCCAACTTTCCGTGACGACCTAGAAGTCATTG                                                                   <  SRR4302543.7949648/94‑1 (MQ=60)
                             ATCAGGTCATTGAACTGGCGGTTGCACGTAAAAATAATCCGCAGGCCACCATTGATATCGCTCCAACTTTCCGTGACGACCTAGAAGTCATTGG                                                                  >  SRR4302543.7918830/1‑94 (MQ=60)
                             ATCAGGTCATTGAACTGGCGGTTGCACGTAAAAATAATCCGCAGGCCACCATTGATATCGCTCCAACTTTCCGTGACGACCTAGAAGTCATTGG                                                                  >  SRR4302543.5152578/1‑94 (MQ=60)
                             ATCAGGTCATTGAACTGGCGGTTGCACGTAAAAATAATCCGCAGGCCACCATTGATATCGCTCCAACTTTCCGTGACGACCTAGAAGTCATTGG                                                                  >  SRR4302543.760067/1‑94 (MQ=60)
                              TCAGGTCATTGAAATGGCGATTGCTCGTGAAAATAATCCGCAGGCAACCATTGATATCGCTCCAACTTTCCGTGACGACCTAGAAGTCATTAGT                                                                 <  SRR4302543.7098392/94‑1 (MQ=60)
                               CAGGTCATTGAACTGGCGGTTGCACGTAAAAATAATCCGCAGGCCACCATTGATATCGCTCCAACTTTCCGTGACGACCTAGAAGTCATTGGTA                                                                >  SRR4302543.908900/1‑94 (MQ=60)
                                AGGTCATTGAACTGGCGGTTGCACGTAAAAATAATCCGCAGGCCACCATTGATATCGCTCCAACTTTCCGTGACGACCTAGAAGTCATTGGTAA                                                               <  SRR4302543.4218683/94‑1 (MQ=60)
                                 GGTCATTGAACTGGCGGTTGCACGTAAAAATAATCCGCAGGCCACCATTGATATCGCTCCAACTTTCCGTGACGACCTAGAAGTCATTGGTAAG                                                              >  SRR4302543.707256/1‑94 (MQ=60)
                                 GGTCATTGAACTGGCGGTTGCACGTAAAAATAATCCGCAGGCCACCATTGATATCGCTCCAACTTTCCGTGACGACCTAGAAGTCATTGGTAAG                                                              <  SRR4302543.4450702/94‑1 (MQ=60)
                                  GTCATTGAACTGGCGGTTGCACGTAAAAATAATCCGCAGGCCACCATTGATATCGCTCCAACTTTCCGTGACGACCTAGAAGTCATTGGTAAGC                                                             >  SRR4302543.884637/1‑94 (MQ=60)
                                  GTCATTGAACTGGCGGTTGCACGTAAAAATAATCCGCAGGCCACCATTGATATCGCTCCAACTTTCCGTGACGACCTAGAAGTCATTGGTAAGC                                                             <  SRR4302543.3884825/94‑1 (MQ=60)
                                    CATTGAACTGGCGGTTGCACGTAAAAATACTCCGCAGGCCACCATTGATATCGCTCCAACTTTCCGTGACGACCTAGAAGTCATTGGTAAGCAT                                                           <  SRR4302543.2234148/94‑1 (MQ=60)
                                    CATTGAACTGGCGGTTGCACGTAAAAATAATCCGCAGGCCACCATTGATATCGCTCCAACTTTCCGTGACGACCTAGAAGTCATTGGTAAGCAT                                                           >  SRR4302543.2473311/1‑94 (MQ=60)
                                    CATTGAACTGGCGGTTGCACGTAAAAATAATCCGCAGGCCACCATTGATATCGCTCCAACTTTCCGTGACGACCTAGAAGTCATTGGTAAGCAT                                                           >  SRR4302543.6776341/1‑94 (MQ=60)
                                     ATTGAACTGGCGGTTGCACGTAAAAATAATCCGCAGGCCACCATTGATATCGCTCCAACTTTCCGTGACGACCTAGAAGTCATTGGTAAGCATT                                                          <  SRR4302543.2338409/94‑1 (MQ=60)
                                      TTGAACTGGCGGTTGCACGTAAAAATAATCCGCAGGCCACCATTGATATCGCTCCAACTTTCCGTGACGACCTAGAAGTCATTGGTAAGCATTA                                                         <  SRR4302543.6309369/94‑1 (MQ=60)
                                       TGAACTGGCGGTTGCACGTAAAAATAATCCGCAGGCCACCATTGATATCGCTCCAACTTTCCGTGACGACCTAGAAGTCATTGGTAAGCATTAT                                                        <  SRR4302543.5559964/94‑1 (MQ=60)
                                       TGAACTGGCGGTTGCACGTAAAAATAATCCGCAGGCCACCATTGATATCGCTCCAACTTTCCGTGACGACCTAGAAGTCATTGGTAAGCATTAT                                                        <  SRR4302543.2908540/94‑1 (MQ=60)
                                       TGAACTGGCGGTTGCACGTAAAAATAATCCGCAGGCCACCATTGATATCGCTCCAACTTTCCGTGACGACCTAGAAGTCATTGGTAAGCATTAT                                                        <  SRR4302543.147047/94‑1 (MQ=60)
                                       TGAACTGGCGGTTGCACGTAAAAATAATCCGCAGGCCACCATTGATATCGCTCCAACTTTCCGTGACGACCTAGAAGTCATTGGTAAGCATTAT                                                        >  SRR4302543.6766111/1‑94 (MQ=60)
                                         AACTGGCGGTTGCACGTAAAAATAATCCGCAGGCCACCATTGATATCGCTCCAACTTTCCGTGACGACCTAGAAGTCATTGGTAAGCATTATCC                                                      <  SRR4302543.7531088/94‑1 (MQ=60)
                                         AACTGGCGGTTGCACGTAAAAATAATCCGCAGGCCACCATTGATATCGCTCCAACTTTCCGTGACGACCTAGAAGTCATTGGTAAGCATTATCC                                                      >  SRR4302543.4055628/1‑94 (MQ=60)
                                         AACTGGCGGTTGCACGTAAAAATAATCCGCAGGCCACCATTGATATCGCTCCAACTTTCCGTGACGACCTAGAAGTCATTGGTAAGCATTATCC                                                      >  SRR4302543.4055627/1‑94 (MQ=60)
                                         AACTGGCGGTTGCACGTAAAAATAATCCGCAGGCCACCATTGATATCGCTCCAACTTTCCGTGACGACCTAGAAGTCATTGGTAAGCATTATCC                                                      <  SRR4302543.3458364/94‑1 (MQ=60)
                                         AACTGGCGGGTGCACGTAAAAATAATCCGCAGGCCACCATTGATATCGCTCCAACTTTCCGTGACGACCTAGAAGTCATTGGTAAGCATTATCC                                                      <  SRR4302543.3458365/94‑1 (MQ=60)
                                          ACTGGCGGTTGCACGTAAAAATAATCCGCAGGCCACCATTGATATCGCTCCAACTTTCCGTGACGACCTAGAAGTCATTGGTAAGCATTATCCT                                                     <  SRR4302543.1301604/94‑1 (MQ=60)
                                           CTGGCGGTTGCACGTAAAAATAATCCGCAGGCCACCATTGATATCGCTCCAACTTTCCGTGACGACCTAGAAGTCATTGGTAAGCATTATCCTA                                                    >  SRR4302543.5321300/1‑94 (MQ=60)
                                           CTGGCGGTTGCACGTAAAAATAATCCGCAGGCCACCATTGATATCGCTCCAACTTTCCGTGACGACCTAGAAGTCATTGGTAAGCATTATCCTA                                                    >  SRR4302543.4740757/1‑94 (MQ=60)
                                            TGGCGGTTGCACGTAAAAATAATCCGCAGGCCACCATTGATATCGCTCCAACTTTCCGTGACGACCTAGAAGTCATTGGTAAGCATTATCCTAA                                                   >  SRR4302543.4831395/1‑94 (MQ=60)
                                             GGCGGTTGCACGTAAAAATAATCCGCAGGCCACCATTGATATCGCTCCAACTTTCCGTGACGACCTAGAAGTCATTGGTAAGCATTATCCTAAA                                                  <  SRR4302543.1091132/94‑1 (MQ=60)
                                             GGCGGTTGCACGTAAAAATAATCCGCAGGCCACCATTGATATCGCTCCAACTTTCCGTGACGACCTAGAAGTCATTGGTAAGCATTATCCTAAA                                                  >  SRR4302543.3689494/1‑94 (MQ=60)
                                             GGCGGTTGCACGTAAAAATAATCCGCAGGCCACCATTGATATCGCTCCAACTTTCCGTGACGACCTAGAAGTCATTGGTAAGCATTATCCTAAA                                                  >  SRR4302543.7727537/1‑94 (MQ=60)
                                              GCGGTTGCACGTAAAAATAATCCGCAGGCCACCATTGATATCGCTCCAACTTTCCGTGACGACCTAGAAGTCATTGGTAAGCATTATCCTAAAA                                                 <  SRR4302543.5790953/94‑1 (MQ=60)
                                               CGGTTGCACGTAAAAATAATCCGCAGGCCACCATTGATATCGCTCCAACTTTCCGTGACGACCTAGAAGTCATTGGTAAGCATTATCCTAAAAC                                                <  SRR4302543.6585608/94‑1 (MQ=60)
                                                GGTTGCACGTAAAAATAATCCGCAGGCCACCATTGATATCGCTCCAACTTTCCGTGACGACCTAGAAGTCATTGGTAAGCATTATCCTAAAACT                                               >  SRR4302543.7089458/1‑94 (MQ=60)
                                                GGTTGCACGTAAAAATAATCCGCAGGCCACCATTGATATCGCTCCAACTTTCCGTGACGACCTAGAAGTCATTGGTAAGCATTATCCTAAAACT                                               >  SRR4302543.5747599/1‑94 (MQ=60)
                                                GGTTGCACGTAAAAATAATCCGCAGGCCACCATTGATATCGCTCCAACTTTCCGTGACGACCTAGAAGTCATTGGTAAGCATTATCCTAAAACT                                               >  SRR4302543.3334042/1‑94 (MQ=60)
                                                GGTTGCACGTAAAAATAATCCGCAGGCCACCATTGATATCGCTCCAACTTTCCGTGACGACCTAGAAGTCATTGGTAAGCATTATCCTAAAACT                                               <  SRR4302543.6802867/94‑1 (MQ=60)
                                                GGTTGCACGTAAAAATAATCCGCAGGCCACCATTGATATCGCTCCAACTTTCCGTGACGACCTAGAAGTCATTGGTAAGCATTATCCTAAAACT                                               <  SRR4302543.1303257/94‑1 (MQ=60)
                                                 GTTGCACGTAAAAATAATCCGCAGGCCACCATTGATATCGCTCCAACTTTCCGTGACGACCTAGAAGTCATTGGTAAGCATTATCCTAAAACTG                                              >  SRR4302543.1837523/1‑94 (MQ=60)
                                                 GTTGCACGTAAAAATAATCCGCAGGCCACCATTGATATCGCTCCAACTTTCCGTGACGACCTAGAAGTCATTGGTAAGCATTATCCTAAAACTG                                              <  SRR4302543.1794874/94‑1 (MQ=60)
                                                  TTGCACGTAAAAATAATCCGCAGGCCACCATTGATATCGCTCCAACTTTCCGTGACGACCTAGAAGTCATTGGTAAGCATTATCCTAAAACTGA                                             >  SRR4302543.7835235/1‑94 (MQ=60)
                                                  TTGCACGTAAAAATAATCCGCAGGCCACCATTGATATCGCTCCAACTTTCCGTGACGACCTAGAAGTCATTGGTAAGCATTATCCTAAAACTGA                                             >  SRR4302543.5955800/1‑94 (MQ=60)
                                                  TTGCACGTAAAAATAATCCGCAGGCCACCATTGATATCGCTCCAACTTTCCGTGACGACCTAGAAGTCATTGGTAAGCATTATCCTAAAACTGA                                             >  SRR4302543.563086/1‑94 (MQ=60)
                                                   TGCACGTAAAAATAATCCGCAGGCCACCATTGATATCGCTCCAACTTTCCGTGACGACCTAGAAGTCATTGGTAAGCATTATCCTAAAACTGAT                                            <  SRR4302543.2970761/94‑1 (MQ=60)
                                                   TGCACGTAAAAATAATCCGCAGGCCACCATTGATATCGCTCCAACTTTCCGTGACGACCTAGAAGTCATTGGTAAGCATTATCCTAAAACTGAT                                            <  SRR4302543.7382820/94‑1 (MQ=60)
                                                   TGCACGTAAAAATAATCCGCAGGCCACCATTGATATCGCTCCAACTTTCCGTGACGACCTAGAAGTCATTGGTAAGCATTATCCTAAAACTGAT                                            <  SRR4302543.7980001/94‑1 (MQ=60)
                                                   TGCACGTAAAAATAATCCGCAGGCCACCATTGATATCGCTCCAACTTTCCGTGACGACCTAGAAGTCATTGGTAAGCATTATCCTAAAACTGAT                                            >  SRR4302543.3943825/1‑94 (MQ=60)
                                                   TGCACGTAAAAATAATCCGCAGGCCACCATTGATATCGCTCCAACTTTCCGTGACGACCTAGAAGTCATTGGTAAGCATTATCCTAAAACTGAT                                            <  SRR4302543.4004422/94‑1 (MQ=60)
                                                    GCACGTAAAAATAATCCGCAGGCCACCATTGATATCGCTCCAACTTTCCGTGACGACCTAGAAGTCATTGGTAAGCATTATCCTAAAACTGATG                                           <  SRR4302543.370310/94‑1 (MQ=60)
                                                    GCACGTAAAAATAATCCGCAGGCCACCATTGATATCGCTCCAACTTTCCGTGACGACCTAGAAGTCATTGGTAAGCATTATCCTAAAACTGATG                                           <  SRR4302543.7743029/94‑1 (MQ=60)
                                                    GCACGTAAAAATAATCCGCAGGCCACCATTGATATCGCTCCAACTTTCCGTGACGACCTAGAAGTCATTGGTAAGCATTATCCTAAAACTGATG                                           <  SRR4302543.3814124/94‑1 (MQ=60)
                                                     CACGTAAAAATAATCCGCAGGCCACCATTGATATCGCTCCAACTTTCCGTGACGACCTAGAAGTCATTGGTAAGCATTATCCTAAAACTGATGC                                          <  SRR4302543.2507763/94‑1 (MQ=60)
                                                     CACGTAAAAATAATCCGCAGGCCACCATTGATATCGCTCCAACTTTCCGTGACGACCTAGAAGTCATTGGTAAGCATTATCCTAAAACTGATGC                                          <  SRR4302543.859314/94‑1 (MQ=60)
                                                     CACGTAAAAATAATCCGCAGGCCACCATTGATATCGCTCCAACTTTCCGTGACGACCTAGAAGTCATTGGTAAGCATTATCCTAAAACTGATGC                                          >  SRR4302543.579226/1‑94 (MQ=60)
                                                     CACGTAAAAATAATCCGCAGGCCACCATTGATATCGCTCCAACTTTCCGTGACGACCTAGAAGTCATTGGTAAGCATTATCCTAAAACTGATGC                                          >  SRR4302543.4131374/1‑94 (MQ=60)
                                                     CACGTAAAAATAATCCGCAGGCCACCATTGATATCGCTCCAACTTTCCGTGACGACCTAGAAGTCATTGGTAAGCATTATCCTAAAACTGATGC                                          <  SRR4302543.1901031/94‑1 (MQ=60)
                                                     CACGTAAAAATAATCCGCAGGCCACCATTGATATCGCTCCAACTTTCCGTGACGACCTAGAAGTCATTGGTAAGCATTATCCTAAAACTGATGC                                          >  SRR4302543.4098329/1‑94 (MQ=60)
                                                      ACGTAAAAATAATCCGCAGGCCACCATTGATATCGCTCCAACTTTCCGTGACGGCCTAGAAGTCATTGGTAAGCATTATCCTAAAACTGATGCC                                         <  SRR4302543.2154047/94‑1 (MQ=60)
                                                      ACGTAAAAATAATCCGCAGGCCACCATTGATATCGCTCCAACTTTCCGTGACGACCTAGAAGTCATTGGTAAGCATTATCCTAAAACTGATGCC                                         >  SRR4302543.2424937/1‑94 (MQ=60)
                                                      ACGTAAAAATAATCCGCAGGCCACCATTGATATCGCTCCAACTTTCCGTGACGACCTAGAAGTCATTGGTAAGCATTATCCTAAAACTGATGCC                                         <  SRR4302543.113587/94‑1 (MQ=60)
                                                      ACGTAAAAATAATCCGCAGGCCACCATTGATATCGCTCCAACTTTCCGTGACGACCTAGAAGTCATTGGTAAGCATTATCCTAAAACTGATGCC                                         >  SRR4302543.483307/1‑94 (MQ=60)
                                                      ACGTAAAAATAATCCGCAGGCCACCATTGATATCGCTCCAACTTTCCGCGACGACCTAGAAGTCATTGGTAAGCATTATCCTAAAACTGATGCC                                         >  SRR4302543.6105639/1‑94 (MQ=60)
                                                       CGTAAAAATAATCCGCAGGCCACCATTGATATCGCTCCAACTTTCCGTGACGACCTAGAAGTCATTGGTAAGCATTATCCTAAAACTGATGCCG                                        <  SRR4302543.5864935/94‑1 (MQ=60)
                                                         TAAAAATAATCCGCAGGCCACCATTGATATCGCTCCAACTTTCCGTGACGACCTAGAAGTCATTGGTAAGCATTATCCTAAAACTGATGCCGCG                                      <  SRR4302543.1985838/94‑1 (MQ=60)
                                                         TAAAAATAATCCGCAGGCCACCATTGATATCGCTCCAACTTTCCGTGACGACCTAGAAGTCATTGGTAAGCATTATCCTAAAACTGATGCCGCG                                      <  SRR4302543.6523789/94‑1 (MQ=60)
                                                           AAAATAATCCGCAGGCCACCATTGATATCGCTCCAACTTTCCGTGACGACCTAGAAGTCATTGGTAAGCATTATCCTAAAACTGATGCCGCGAA                                    >  SRR4302543.2214622/1‑94 (MQ=60)
                                                           AAAATAATCCGCAGGCCACCATTGATATCGCTCCAACTTTCCGTGACGACCTAGAAGTCATTGGTAAGCATTATCCTAAAACTGATGCCGCGAA                                    <  SRR4302543.7188355/94‑1 (MQ=60)
                                                           AAAATAATCCGCAGGCCACCATTGATATCGCTCCAACTTTCCGTGACGACCTAGAAGTCATTGGTAAGCATTATCCTAAAACTGATGCCGCGAA                                    >  SRR4302543.1092352/1‑94 (MQ=60)
                                                           AAAATAATCCGCAGGCCACCATTGATATCGCTCCAACTTTCCGTGACGACCTAGAAGTCATTGGTAAGCATTATCCTAAAACTGATGCCGCGAA                                    >  SRR4302543.3820086/1‑94 (MQ=60)
                                                            AAATAATCCGCAGGCCACCATTGATATCGCTCCAACTTTCCGTGACGACCTAGAAGTCATTGGTAAGCATTATCCTAAAACTGATGCCGCGAAA                                   >  SRR4302543.203386/1‑94 (MQ=60)
                                                              ATAATCCGCAGGCCACCATTGATATCGCTCCAACTTTCCGTGACGACCTAGAAGTCATTGGTAAGCATTATCCTAAAACTGATGCCGCGAAAAT                                 <  SRR4302543.5192187/94‑1 (MQ=60)
                                                              ATAATCCGCAGGCCACCATTGATATCGCTCCAACTTTCCGTGACGACCTAGAAGTCATTGGTAAGCATTATCCTAAAACTGATGCCGCGAAAAT                                 <  SRR4302543.5192186/94‑1 (MQ=60)
                                                              ATAACCCGCAGGCCACCATTGATATCGCTCCAACTTTCCGTGACGCCCTAGAAGTCATTGGTAAGCATTATCCTAAAACTGATGCCGCGAAAAT                                 <  SRR4302543.1596372/94‑1 (MQ=60)
                                                                  TCCGCAGGCCACCATTGATATCGCTCCAACTTTCCGTGACGACCTAGAAGTCATTGGTAAGCATTATCCTAAAACTGATGCCGCGAAAATGGTG                             <  SRR4302543.2955230/94‑1 (MQ=60)
                                                                  TCCGCAGGCCACCATTGATATCGCTCCAACTTTCCGTGACGACCTAGAAGTCATTGGTAAGCATTATCCTAAAACTGATGCCGCGAAAATGGTG                             <  SRR4302543.3543420/94‑1 (MQ=60)
                                                                  ACCGCAGGCCACCATTGATATCGCTCCAACTTTCCGTGACGACCTAGAAGTCATTGGTAAGCATTATCCTAAAACTGATGCCGCGAAAATGGTG                             <  SRR4302543.5386147/94‑1 (MQ=60)
                                                                   CCGCAGGCCACCATTGATATCGCTCCAACTTTCCGTGACGACCTAGAAGTCATTGGTAAGCATTATCCTAAAACTGATGCCGCGAAAATGGTGC                            >  SRR4302543.5787584/1‑94 (MQ=60)
                                                                    CGCAGGCCACCATTGATATCGCTCCAACTTTCCGTGACGACCTAGAAGTCATTGGTAAGCATTATCCTAAAACTGATGCCGCGAAAATGGTGCA                           <  SRR4302543.90110/94‑1 (MQ=60)
                                                                     GCAGGCCACCATTGATATCGCTCCAACTTTCCGTGACGACCTAGAAGTCATTGGTAAGCATTATCCTAAAACTGATGCCGCGAAAATGGTGCAG                          <  SRR4302543.819174/94‑1 (MQ=60)
                                                                      CAGGCCACCATTGATATCGCTCCAACTTTCCGTGACGACCTAGAAGTCATTGGTAAGCATTATCCTAAAACTGATGCCGCGAAAATGGTGCAGG                         >  SRR4302543.4602510/1‑94 (MQ=60)
                                                                      CAGGCCACCATTGATATCGCTCCAACTTTCCGTGACGACCTAGAAGTCATTGGTAAGCATTATCCTAAAACTGATGCCGCGAAAATGGTGCAGG                         >  SRR4302543.517512/1‑94 (MQ=60)
                                                                         GCCACCATTGATATCGCTCCAACTTTCCGTGACGACCTAGAAGTCATTGGTAAGCATTATCCTAAAACTGATGCCGCGAAAATGGTGCAGGCGA                      <  SRR4302543.5922020/94‑1 (MQ=60)
                                                                         GCCACCATTGATATCGCTCCAACTTTCCGTGACGACCTAGAAGTCATTGGTAAGCATTATCCTAAAACTGATGCCGCGAAAATGGTGCAGGCGA                      >  SRR4302543.1488528/1‑94 (MQ=60)
                                                                          CCACCATTGATATCGCTCCAACTTTCCGTGACGACCTAGAAGTCATTGGTAAGCATTATCCTAAAACTGATGCCGCGAAAATGGTGCAGGCGAA                     <  SRR4302543.134189/94‑1 (MQ=60)
                                                                          CCACCATTGATATCGCTCCAACTTTCCGTGACGACCTAGAAGTCATTGGTAAGCATTATCCTAAAACTGATGCCGCGAAAATGGTGCAGGCGAA                     <  SRR4302543.7531450/94‑1 (MQ=60)
                                                                          CCACCATTGATATCGCTCCAACTTTCCGTGACGACCTAGAAGTCATTGGTAAGCATTATCCTAAAACTGATGCCGCGAAAATGGTGCAGGCGAA                     >  SRR4302543.3958713/1‑94 (MQ=60)
                                                                          CCACCATTGATATCGCTCCAACTTTCCGTGACGACCTAGAAGTCATTGGTAAGCATTATCCTAAAACTGATGCCGCGAAAATGGTGCAGGCGAA                     >  SRR4302543.260638/1‑94 (MQ=60)
                                                                            ACCATTGATATCGCTCCAACTTTCCGTGACGACCTAGAAGTCATTGGTAAGCATTATCCTAAAACTGATGCCGCTAAAATGGTGCAGGCGAAAC                   <  SRR4302543.4600488/94‑1 (MQ=60)
                                                                            ACCATTGATATCGCTCCAACTTTCCGTGACGACCTAGAAGTCATTGGTAAGCATTATCCTAAAACTGATGCCGCGAAAATGGTGCAGGCGAAAC                   >  SRR4302543.4175196/1‑94 (MQ=60)
                                                                            ACCATTGATATCGCTCCAACTTTCCGTGACGACCTAGAAGTCATTGGTAAGCATTATCCTAAAACTGATGCCGCGAAAATGGTGCAGGCGAAAC                   <  SRR4302543.4603483/94‑1 (MQ=60)
                                                                             CCATTGATATCGCTCCAACTTTCCGTGACGACCTAGAAGTCATTGGTAAGCATTATCCTAAAACTGATGCCGCGAAAATGGTGCAGGCGAAACC                  >  SRR4302543.1973330/1‑94 (MQ=60)
                                                                             CCATTGATATCGCTCCAACTTTCCGTGACGACCTAGAAGTCATTGGTAAGCATTAACCTAAAACTGATGCCGCGAAAATGGTGCAGGCGAAACC                  >  SRR4302543.3276536/1‑94 (MQ=60)
                                                                               ATTGATATCGCTCCAACTTTCCGTGACGACCTAGAAGTCATTGGTAAGCATTATCCTAAAACTGATGCCGCGAAAATGGTGCAGGCGAAACCCT                >  SRR4302543.2723788/1‑94 (MQ=60)
                                                                               ATTGATATCGCTCCAACTTTCCGTGACGACCTAGAAGTCATTGGTAAGCATTATCCTAAAACTGATGCCGCGAAAATGGTGCAGGCGAAACCCT                >  SRR4302543.2880266/1‑94 (MQ=60)
                                                                               ATTGATATCGCTCCAACTTTCCGTGACGACCTAGAAGTCATTGGTAAGCATTATCCTAAAACTGATGCCGCGAAAATGGTGCAGGCGAAACCCT                >  SRR4302543.7450648/1‑94 (MQ=60)
                                                                                TTGATATCGCTCCAACTTTCCGTGACGACCTAGAAGTCATTGGTAAGCATTATCCTAAAACTGATGCCGCGAAAATGGTGCAGGCGAAACCCTG               <  SRR4302543.3757257/94‑1 (MQ=60)
                                                                                TTGATATCGCTCCAACTTTCCGTGACGACCTAGAAGTCATTGGTAAGCATTATCCTAAAACTGATGCCGCGAAAATGGTGCAGGCGAAACCCTG               <  SRR4302543.776483/94‑1 (MQ=60)
                                                                                  GATATCGCTCCAACTTTCCGTGACGACCTAGAAGTCATTGGTAAGCATTATCCTAAAACTGATGCCGCGAAAATGGTGCAGGCGAAACCCTGCT             <  SRR4302543.6028213/94‑1 (MQ=60)
                                                                                  GATATCGCTCCAACTTTCCGTGACGACCTAGAAGTCATTGGTAAGCATTATCCTAAAACTGATGCCGCGAAAATGGTGCAGGCGAAACCCTGCT             <  SRR4302543.767651/94‑1 (MQ=60)
                                                                                   ATATCGCTCCAACTTTCCGTGACGACCTAGAAGTCATTGGTAAGCATTATCCTCAAACTGATGCCGCGAAAATGGTGCAGGCGCAACCCTGCTA            >  SRR4302543.4246356/1‑94 (MQ=60)
                                                                                   ATATCGCTCCAACTTTCCGTGACGACCTAGAAGTCATTGGTAAGCATTATCCTAAAACTGATGCCGCGAAAATGGTGCAGGCGAAACCCTGCTA            >  SRR4302543.7479814/1‑94 (MQ=60)
                                                                                   ATATCGCTCCAACTTTCCGTGACGACCTAGAAGTCATTGGTAAGCATTATCCTAAAACTGATGCCGCGAAAATGGTGCAGGCGAAACCCTGCTA            >  SRR4302543.4246358/1‑94 (MQ=60)
                                                                                   ATATCGCTCCAACTTTCCGTGACGACCTAGAAGTCATTGGTAAGCATTATCCTAAAACTGATGCCGCGAAAATGGGGCAGGCGAAACCCTGCTA            >  SRR4302543.4354682/1‑94 (MQ=60)
                                                                                    TATCGCTCCACCTTTCAGTGACGACCTAGAAGTCATTGGTAAGCATTATCCTAAAACTGATGCCGCGAAAATGGTGCAGGCGAAACCCTGCTAT           <  SRR4302543.7015663/94‑1 (MQ=60)
                                                                                    TATCGCTCCAACTTTCCGTGACGACCTAGAAGTCATTGGTAAGCATTATCCTAAAACTGATGCCGCGAAAATGGTGCAGGCGAAACCCTGCTAT           >  SRR4302543.1129276/1‑94 (MQ=60)
                                                                                    TATCGCTCCAACTTTCCGTGACGACCTAGAAGTCATTGGTAAGCATTATCCTAAAACTGATGCCGCGAAAATGGTGCAGGCGAAACCCTGCTAT           >  SRR4302543.2187492/1‑94 (MQ=60)
                                                                                    TATCGCTCCAACTTTCCGTGACGACCTAGAAGTCATTGGTAAGCATTATCCTAAAACTGATGCCGCGAAAATGGTGCAGGCGAAACCCTGCTAT           >  SRR4302543.63138/1‑94 (MQ=60)
                                                                                    TACCGCTCCAACTTTCCGTGACGACCTAGAAGTCATTGGTAAGCATTATCCTAAAACTGATGCCGCGAAAATGGTGCAGGCGAAACCCTGCTAT           <  SRR4302543.6164666/94‑1 (MQ=60)
                                                                                    CATCGCTCCAACTTTCCGTGACGACCTAGAAGTCATTGGTAAGCATTATCCTAAAACTGATGCCGCGAAAATGGTGCAGGCGAAACCCTGCTAT           <  SRR4302543.600312/94‑1 (MQ=60)
                                                                                       CGCTCCAACTTTCCGTGACGACCTAGAAGTCATTGGTAAGCATTATCCTAAAACTGATGCCGCGAAAATGGTGCAGGCGAAACCCTGCTATGTT        <  SRR4302543.255854/94‑1 (MQ=60)
                                                                                       CGCTCCAACTTTCCGTGACGACCTAGAAGTCATTGGTAAGCATTATCCTAAAACTGATGCCGCGAAAATGGTGCAGGCGAAACCCTGCTATGTT        <  SRR4302543.5458234/94‑1 (MQ=60)
                                                                                        GCTCCAACTTTCCGTGACGACCTAGAAGTCATTGGTAAGCATTATCCTAAAACTGATGCCGCGAAAATGGTGCAGGCGAAACCCTGCTATGTTG       <  SRR4302543.56087/94‑1 (MQ=60)
                                                                                        GCTCCAACTTTCCGTGACGACCTAGAAGTCATTGGTAAGCATTATCCTAAAACTGATGCCGCGAAAATGGTGCAGGCGAAACCCTGCTATGTTG       <  SRR4302543.7440551/94‑1 (MQ=60)
                                                                                        GCTCCAACTTTCCGTGACGACCTAGAAGTCATTGGTAAGCATTATCCTAAAACTGATGCCGCGAAAATGGTGCAGGCGAAACCCTGCTATGTTG       >  SRR4302543.3093946/1‑94 (MQ=60)
                                                                                          TCCAACTTTCCGTGACGACCTAGAAGTCATTGGTAAGCATTATCCTAAAACTGATGCCGCGAAAATGGTGCAGGCGAAACCCTGCTATGTTGAA     >  SRR4302543.2156281/1‑94 (MQ=60)
                                                                                          TCCAACTTTCCGTGACGACCTAGAAGTCATTGGTAAGCATTATCCTAAAACTGATGCCGCGAAAATGGTGCAGGCGAAACCCTGCTATGTTGAA     >  SRR4302543.517495/1‑94 (MQ=60)
                                                                                          TCCAACTTTCCGTGACGACCTAGAAGTCATTGGTAAGCATTATCCTAAAACTGATGCCGCGAAAATGGTGCAGGCGAAACCCTGCTATGTTGAA     <  SRR4302543.7605317/94‑1 (MQ=60)
                                                                                           CCAACTTTCCGTGACGACCTAGAAGTCATTGGTAAGCATTATCCTAAAACTGATGCCGCGAAAATGGTGCAGGCGAAACCCTGCTATGTTGAAG    >  SRR4302543.3451877/1‑94 (MQ=60)
                                                                                           CCAACTTTCCGTGACGACCTAGAAGTCATTGGTAAGCATTATCCTAAAACTGATGCCGCGAAAATGGTGCAGGCGAAACCCTGCTATGTTGAAG    <  SRR4302543.2399747/94‑1 (MQ=60)
                                                                                           CCAACTTTCCGTGACGACCTAGAAGTCATTGGTAAGCATTATCCTAAAACTGATGCCGCGAAAATGGTGCAGGCGAAACCCTGCTATGTTGAAG    <  SRR4302543.3064846/94‑1 (MQ=60)
                                                                                            CAACTTTCCGTGACGACCTAGAAGTCATTGGTAAGCATTATCCTAAAACTGATGCCGCGAAAATGGTGCAGGCGAAACCCTGCTATGTTGAAGA   <  SRR4302543.1774706/94‑1 (MQ=60)
                                                                                            CAACTTTCCGTGACGACCTAGAAGTCATTGGTAAGCATTATCCTAAAACTGATGCCGCGAAAATGGTGCAGGCGAAACCCTCCTATGTTGAAGA   <  SRR4302543.7026993/94‑1 (MQ=60)
                                                                                             AACTTTCCGTGACGACCTCGACGTCAATGGTACGCATTATCCTAAAACTGATGACGCGAAAATGGTGCAGGCGAAACCCTGCTATGTTGCAGAC  >  SRR4302543.927726/1‑94 (MQ=60)
                                                                                             AACTTTCCGGGACGACCTAGAAGTCATTGGTAAGCATTATCCTAAAACTGATGCCGCGAAAATGGTGCAGGCGAAACCCTGCTATGTTGAAGAC  >  SRR4302543.927727/1‑94 (MQ=60)
                                                                                             |                                                                                             
CAGCCGCGATGCTGGCTGGCAGCAATACTATCAGGTCATTGAACTGGCGGTTGCACGTAAAAATAATCCGCAGGCCACCATTGATATCGCTCCGACTTTCCGTGACGACCTAGAAGTCATTGGTAAGCATTATCCTAAAACTGATGCCGCGAAAATGGTGCAGGCGAAACCCTGCTATGTTGAAGAC  >  NC_000913/3019732‑3019918

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 18 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑