Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.

ALE, Flask, Isolate	Predicted Mutations	Mean Coverage	Total Reads	Percent Mapped	Mapped Reads	Average Read Length
A1 F1 I1 R1	1696	279.3	15874187	97.8%	15524954	93.0

Breseq alignment

BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	3,075,220	(T)_5→6	coding (256/357 nt)	yggP ←	hypothetical protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	3,075,215	1	.	T	99.3%	1002.7 / ‑1.6	276	coding (261/357 nt)	yggP	hypothetical protein
Reads supporting (aligned to +/- strand): ref base . (1/1); new base T (139/134); total (141/135)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 322 total aligned reads displayed.

ATAAGTGGCATTGCCGCCAAAATATTCGTAGCTGTAGCCCGCTGAATATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGG‑CC‑TTTTT‑ATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCGGCACATTCATGCCCGGTAATGACCGGATGATTTTCTAAAT  >  NC_000913/3075123‑3075303

ataAGTGGCATTGCCGCCAAAATATTCGTAGCTGTAGCCCGCTGAATATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGG‑cc                                                                                            <  1:2108804/93‑1 (MQ=255)

 taAGTGGCATTGCCGCCAAAATATTCGTAGCTGTAGCCCGCTGAATATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGG‑CC‑t                                                                                          >  2:6017761/1‑93 (MQ=255)

 taAGTGGCATTGCCGCCAAAATATTCGTAGCTGTAGCCCGCTGAATATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGG‑CC‑t                                                                                          >  1:5353215/1‑93 (MQ=255)

  aaGTGGCATTGCCGCCAAAATATTCGTAGCTGTAGCCCGCTGAATATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGG‑CC‑tt                                                                                         <  2:2020266/93‑1 (MQ=255)

  aaGTGGCATTGCCGCCAAAATATTCGTAGCTGTAGCCCGCTGAATATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGG‑CC‑tt                                                                                         >  1:3876020/1‑93 (MQ=255)

  aaGTGGCATTGCCGCCAAAATATTCGTAGCTGTAGCCCGCTGAATATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGG‑CC‑tt                                                                                         <  1:5104060/93‑1 (MQ=255)

  aaGTGGCATTGCCGCCAAAATATTCGTAGCTGTAGCCCGCTGAATATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGG‑CC‑tt                                                                                         <  2:1468995/93‑1 (MQ=255)

  aaGTGGCATTGCCGCCAAAATATTCGTAGCTGTAGCCCGCTGAATATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGG‑CC‑tt                                                                                         <  1:580822/93‑1 (MQ=255)

     tGGCATTGCCGCCAAAATATTCGTAGCTGTAGCCCGCTGAATATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGG‑CC‑ttttt                                                                                      >  1:4197959/1‑93 (MQ=255)

      ggCATTGCCGCCAAAATATTCGTAGCTGTAGCCCGCTGAATATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGG‑CC‑tttttt                                                                                     <  2:7835291/93‑2 (MQ=255)

       gCATTGCCGCCAAAATATTCGTAGCTGTAGCCCGCTGAATATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGG‑CC‑tttttta                                                                                    <  2:71421/93‑3 (MQ=255)

        cATTGCCGCCAAAATATTCGTAGCTGTAGCCCGCTGAATATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGG‑CC‑ttttttat                                                                                   <  2:4032235/93‑4 (MQ=255)

         aTTGCCGCCAAAATATTCGTAGCTGTAGCCCGCTGAATATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGG‑CC‑ttttttata                                                                                  >  1:6264904/1‑89 (MQ=255)

         aTTGCCGCCAAAATATTCGTAGCTGTAGCCCGCTGAATATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGG‑CC‑ttttttata                                                                                  <  2:3443637/93‑5 (MQ=255)

           tGCCGCCAAAATATTCGTAGCTGTAGCCCGCTGAATATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGTTGG‑CCTTTTTT‑ATAtt                                                                                <  2:7509507/93‑1 (MQ=255)

           tGCCGCCAAAATATTCGTAGCTGTAGCCCGCTGAATATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGG‑CCTTTTTT‑ATAtt                                                                                <  1:1029686/93‑1 (MQ=255)

           tGCCGCCAAAATATTCGTAGCTGTAGCCCGCTGAATATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGG‑CCTTTTTT‑ATAtt                                                                                <  2:1055438/93‑1 (MQ=255)

           tGCCGCCAAAATATTCGTAGCTGTAGCCCGCTGAATATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGG‑CCTTTTTT‑ATAtt                                                                                <  2:334873/93‑1 (MQ=255)

           tGCCGCCAAAATATTCGTAGCTGTAGCCCGCTGAATATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGG‑CCTTTTTT‑ATAtt                                                                                <  2:394683/93‑1 (MQ=255)

           tGCCGCCAAAATATTCGTAGCTGTAGCCCGCTGAATATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGG‑CCTTTTTT‑ATAtt                                                                                <  2:5127315/93‑1 (MQ=255)

           tGCCGCCAAAATATTCGTAGCTGTAGCCCGCTGAATATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGG‑CCTTTTTT‑ATAtt                                                                                <  1:2241986/93‑1 (MQ=255)

             ccgccAAAATATTCGTAGCTGTAGCCCGCTGAATATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGG‑CCTTTTTT‑ATATTTg                                                                              <  2:4452657/93‑1 (MQ=255)

              cgccAAAATATTCGTAGCTGTAGCCCGCTGAATATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGG‑CCTTTTTT‑ATATTTGc                                                                             <  2:451826/93‑1 (MQ=255)

               gccAAAATATTCGTAGCTGTAGCCCGCTGAATATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGG‑CCTTTTTT‑ATATTTGcc                                                                            <  2:5512514/93‑1 (MQ=255)

               gccAAAATATTCGTAGCTGTAGCCCGCTGAATATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGG‑CCTTTTTT‑ATATTTGcc                                                                            >  1:7933894/1‑93 (MQ=255)

                gcAAAATATTCGTAGCTGTAGCCCGCTGAATATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGG‑CCTTTTTT‑ATATTTGCCa                                                                           <  1:1756849/92‑1 (MQ=255)

                ccAAAATATTCGTAGCTGTAGCCCGCTGAATATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGG‑CCTTTTTT‑ATATTTGCCa                                                                           >  2:4143312/1‑93 (MQ=255)

                  aaaaTATTCGTAGCTGTAGCCCGCTGAATATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGG‑CCTTTTTT‑ATATTTGCCAGt                                                                         <  1:1864295/93‑1 (MQ=255)

                   aaaTATTCGTAGCTGTAGCCCGCTGAATATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGG‑CCTTTTTT‑ATATTTGCCAGTg                                                                        <  1:3660602/93‑1 (MQ=255)

                    aaTATTCGTAGCTGTAGCCCGCTGAATATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTTG‑CCTTTTTT‑ATATTTGCCAGTga                                                                       >  2:4335615/1‑93 (MQ=255)

                     atatTCGTAGCTGTAGCCCGCTGAATATCCGCTTGGTAACTCCATCGCCGGTTGCAATACAAAACGCTGG‑CCTTTTTT‑ATATTTGCCAGTgag                                                                      >  1:6718162/1‑93 (MQ=255)

                      tatTCGTAGCTGTAGCCCGCTGAATATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGG‑CCTTTTTT‑ATATTTGCCAGTgaga                                                                     >  1:704613/1‑93 (MQ=255)

                       atTCGTAGCTGTAGCCCGCTGAATATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGG‑CCTTTTTT‑ATATTTGCCAGTGAGAt                                                                    <  1:910693/93‑1 (MQ=255)

                          cGTAGCTGTAGCCCGCTGAATATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGG‑CCTTTTTT‑ATATTTGCCAGTGAGAtttt                                                                 <  1:7164962/93‑1 (MQ=255)

                          cGTAGCTGTAGCCCGCTGAATATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGG‑CCTTTTTT‑ATATTTGCCAGTGAGAtttt                                                                 >  2:2948286/1‑93 (MQ=255)

                           gTAGCTGTAGCCCGCTGAATATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGG‑CCTTTTTT‑ATATTTGCCAGTGAGAttttt                                                                <  1:2984089/93‑1 (MQ=255)

                            tAGCTGTAGCCCGCTGAATATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGG‑CCTTTTTT‑ATATTTGCCAGTGAGATTTTTa                                                               >  1:428507/1‑93 (MQ=255)

                              gCTGTAGCCCGCTGAATATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGG‑CCTTTTTT‑ATATTTGCCAGTGAGATTTTTAcc                                                             >  2:1606824/1‑93 (MQ=255)

                                tGTAGCCCGCTGAATATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGG‑CCTTTTTT‑ATATTTGCCAGTGAGATTTTTACCCa                                                           >  1:5512203/1‑93 (MQ=255)

                                tGTAGCCCGCTGAATATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGG‑CCTTTTTT‑ATATTTGCCAGTGAGATTTTTACCCa                                                           >  2:2158996/1‑93 (MQ=255)

                                tGTAGCCCGCTGAATATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGG‑CCTTTTTT‑ATATTTGCCAGTGAGATTTTTACCCa                                                           >  2:6284832/1‑93 (MQ=255)

                                 gTAGCCCGCTGAATATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGG‑CCTTTTTT‑ATATTTGCCAGTGAGATTTTTACCCAc                                                          <  2:1776031/93‑1 (MQ=255)

                                 gTAGCCCGCTGAATATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGG‑CCTTTTTT‑ATATTTGCCAGTGAGATTTTTACCCAc                                                          <  2:1325308/93‑1 (MQ=255)

                                     cccGCTGAATATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGG‑CCTTTTTT‑ATATTTGCCAGTGAGATTTTTACCCACTTCg                                                      <  2:7927952/93‑1 (MQ=255)

                                       cGCTGAATATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGG‑CCTTTTTT‑ATATTTGCCAGTGAGATTTTTACCCACTTCGAc                                                    <  1:7693628/93‑1 (MQ=255)

                                       cGCTGAATATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGG‑CCTTTTTT‑ATATTTGCCAGTGAGATTTTTACCCACTTCGAc                                                    >  2:1175948/1‑93 (MQ=255)

                                       cGCTGAATATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGG‑CCTTTTTT‑ATATTTGCCAGTGAGATTTTTACCCACTTCGAc                                                    >  1:4801219/1‑93 (MQ=255)

                                       cGCTGAATATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGG‑CCTTTTTT‑ATATTTGCCAGTGAGATTTTTACCCACTTCGAc                                                    >  2:583327/1‑93 (MQ=255)

                                        gCTGAATATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGGACT‑TTTTT‑ATATTTGCCAGTGAGATTTTTACCCACTTCGACa                                                   >  2:2252975/1‑93 (MQ=255)

                                        gCTGAATATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGG‑CCTTTTTT‑CTATTTGCCAGTGAGGTTTTTACCCACTTCGACa                                                   >  2:3755102/1‑93 (MQ=255)

                                        gCTGAATATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGG‑CCTTTTTT‑ATATTTGCCAGTGAGATTTTTACCCACTTCGACa                                                   <  2:4878654/93‑1 (MQ=255)

                                         cTGAATATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGG‑CCTTTTTT‑ATATTTGCCAGTGAGATTTTTACCCACTTCGACaa                                                  <  2:1511183/93‑1 (MQ=255)

                                           gAATATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGG‑CCTTTTTT‑ATATTTGCCAGTGAGATTTTTACCCACTTCGACAATa                                                >  2:2410977/1‑93 (MQ=255)

                                            aaTATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGG‑CCTTTTTT‑ATATTTGCCAGTGAGATTTTTACCCACTTCGACAATaa                                               <  2:3235979/93‑1 (MQ=255)

                                             atatCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGG‑CCTTTTTT‑ATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAAc                                              <  1:3140257/93‑1 (MQ=255)

                                              tatCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGG‑CCTTTTTT‑ATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAAcc                                             <  1:6797515/93‑1 (MQ=255)

                                              tatCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGG‑CCTTTTTT‑ATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAAcc                                             >  2:7243201/1‑93 (MQ=255)

                                               atCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGG‑CCTTTTTT‑ATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAAccc                                            >  2:2864852/1‑93 (MQ=255)

                                               atCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGG‑CCTTTTTT‑ATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAAccc                                            <  1:6098061/93‑1 (MQ=255)

                                                tCCGCTTGGTAACCCCACCGCCGGTTGCAATACAAAACGCTGG‑CCGTTTTT‑ATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAAcccc                                           >  2:7018870/1‑93 (MQ=255)

                                                  cGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGG‑CCTTTTTT‑ATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCgg                                         <  2:6638698/93‑1 (MQ=255)

                                                   gCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGG‑CCTTTTTT‑ATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCGGc                                        >  1:2920554/1‑93 (MQ=255)

                                                       ggTAACCCCATCGCCGGTTGCAATACAAAACGCTGG‑CCTTTTTT‑ATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCGGCACAt                                    >  1:7518721/1‑93 (MQ=255)

                                                       ggTAACCCCATCGCCGGTTGCAATACAAAACGCTGG‑CCTTTTTT‑ATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCGGCACAt                                    >  2:1886951/1‑93 (MQ=255)

                                                        gTAACCCCATCGCCGGTTGCAATACAAAACGCTGG‑CCTTTTTT‑ATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCGGCACAtt                                   >  1:5581941/1‑93 (MQ=255)

                                                        gTAACCCCATCGCCGGTTGCAATACAAAACGCTGG‑CCTTTTTT‑ATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCGGCACAtt                                   <  1:792323/93‑1 (MQ=255)

                                                          aaCCCCATCGCCGGTTGCAATACAAAACGCTGG‑CCTTTTTT‑ATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCGGCACATTCa                                 <  2:4260048/93‑1 (MQ=255)

                                                              ccATCGCCGGTTGCAATACAAAACGCTGG‑CCTTTTTT‑ATATTTGCCAGTGAGATTTTTACCCACTTCGAGAATAACCCCGGCACATTCATGcc                             >  2:5660635/1‑93 (MQ=255)

                                                              ccATCGCCGGTTGCAATACAAAACGCTGG‑CCTTTTTT‑ATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCGGCACATTCATGcc                             >  2:2489978/1‑93 (MQ=255)

                                                               cATCGCCGGTTGCAATACAAAACGCTGT‑CCTTTTTT‑ATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCGGCACATTCATGccc                            <  1:3433646/93‑1 (MQ=255)

                                                               cATCGCCGGTTGCAATACAAAACGCTGG‑CCTTTTTT‑ATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCGGCACATTCATGccc                            >  1:5210446/1‑93 (MQ=255)

                                                                aTCGCCGGTTGCAATACAAAACGCTGG‑CCTTTTTT‑ATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCGGCACATTCATGCCCg                           >  2:644358/1‑93 (MQ=255)

                                                                   gCCGGTTGCAATACAAAACGCTGG‑CCTTTTTT‑ATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCGGCACATTCATGCCCGGTa                        >  2:7335737/1‑93 (MQ=255)

                                                                      ggTTGCAATACAAAACGCTGG‑CCTTTTTT‑ATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCGGCACATTCATGCCCGGTAATg                     >  1:3496367/1‑93 (MQ=255)

                                                                       gTTGCAATACAAAACGCTGG‑CCTTTTTT‑ATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCGGCACATTCATGCCCGGTAATGa                    >  2:6796444/1‑93 (MQ=255)

                                                                       gTTGCAATACAAAACGCTGG‑CCTTTTTT‑ATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCGGCACATTCATGCCCGGTAATGa                    >  1:1189802/1‑93 (MQ=255)

                                                                       gTTGCAATACAAAACGCTGG‑CCTTTTTT‑ATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCGGCACATTCATGCCCGGTAATGa                    >  1:6330397/1‑93 (MQ=255)

                                                                       gTTGCAATACAAAACGCTGG‑CCTTTTTT‑ATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCGGCACATTCATGCCCGGTAATGa                    <  1:5233349/93‑1 (MQ=255)

                                                                        ttGCAATACAAAACGCTGG‑CCTTTTTT‑ATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCGGCACATTCATGCCCGGTAATGAc                   <  1:6175896/93‑1 (MQ=255)

                                                                        ttGCAATACAAAACGCTGG‑CCTTTTTT‑ATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCGGCACATTCATGCCCGGTAATGAc                   >  2:5288316/1‑93 (MQ=255)

                                                                        ttGCAATACAAAACGCTGG‑CCTTTTTT‑ATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCGGCACATTCATGCCCGGTAATGAc                   <  1:5917688/93‑1 (MQ=255)

                                                                         tGCAATACAAAACGCTGG‑CCTTTTTT‑ATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCGGCACATTCATGCCCGGTAATGAcc                  <  1:30232/93‑1 (MQ=255)

                                                                         tGCAATACAAAACGCTGG‑CCTTTTTT‑ATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCGGCACATTCATGCCCGGTAATGAcc                  <  2:3036587/93‑1 (MQ=255)

                                                                         tGCAATACAAAACGCTGG‑CCTTTTTT‑ATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCGGCACATTCATGCCCGGTAATGAcc                  >  1:500329/1‑93 (MQ=255)

                                                                          gCAATACAAAACGCTGG‑CCTTTTTT‑ATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCGGCACATTCATGCCCGGTAATGACCg                 <  1:3783695/93‑1 (MQ=255)

                                                                          gCAATACAAAACGCTGG‑CCTTTTTT‑ATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCGGCACATTCATGCCCGGTAATGACCg                 >  1:6550289/1‑93 (MQ=255)

                                                                           cAATACAAAACGCTGG‑CCTTTTTT‑ATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCGGCACATTCATGCCCGGTAATGACCga                >  1:1624296/1‑92 (MQ=255)

                                                                            aaTACAAAACGCTGG‑CCTTTTTT‑ATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCGGCACATTCATGCCCGGTAATGACCGga               >  2:2714839/1‑93 (MQ=255)

                                                                             aTACAAAACGCTGGTCT‑TTTTT‑ATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCGGCACATTCATGCCCGGTAATGACCGgat              <  2:5995486/93‑1 (MQ=255)

                                                                              tACAAAACGCTGG‑CCTTTTTT‑ATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCGGCACATTCATGCCCGGTAATGACCGgatg             >  1:2536781/1‑93 (MQ=255)

                                                                              tACAAAACGCTGG‑CCTTTTTT‑ATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCGGCACATTCATGCCCGGTAATGACCGgatg             >  1:240099/1‑93 (MQ=255)

                                                                                cAAAACGCTGG‑CCTTTTTT‑ATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCGGCACATTCATGCCCGGTAATGACCGgatgat           >  1:4652056/1‑93 (MQ=255)

                                                                                  aaaCGCTGG‑CCTTTTTT‑ATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCGGCACATTCATGCCCGGTAATGACCGGATGAttt         <  1:4602528/93‑1 (MQ=255)

                                                                                   aaCGCTGG‑CCTTTTTT‑ATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCGGCACATTCATGCCCGGTAATGACCGGATGAtttt        >  2:5412779/1‑93 (MQ=255)

                                                                                    aCGCTGG‑CCTTTTTT‑ATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCGGCACATTCATGCCCGGTAATGGCCGGATGATTTTc       >  2:7812330/1‑93 (MQ=255)

                                                                                       cTGG‑CCTTTTTT‑ATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCGGCACATTCATGCCCGGTAATGACCGGATGATTTTCTaa    >  1:3381416/1‑93 (MQ=255)

                                                                                        tGG‑CCTTTTTT‑ATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCGGCACATTCATGCCCGGTAATGACCGGATGATTTTCTaaa   >  1:2807831/1‑93 (MQ=255)

                                                                                        tGG‑CCTTTTTT‑ATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCGGCACATTCATGCCCGGTAATGACCGGATGATTTTCTaaa   <  1:4112297/93‑1 (MQ=255)

                                                                                        tGG‑CCTTTTTT‑ATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCGGCACATTCATGCCCGGTAATGACCGGATGATTTTCTaaa   <  1:7306058/93‑1 (MQ=255)

                                                                                         gg‑CC‑TTTTTGATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCGGCACATTCATGCCCGGTAATGACCGGATGATTTTCTAAAt  <  2:7754469/93‑1 (MQ=255)

ATAAGTGGCATTGCCGCCAAAATATTCGTAGCTGTAGCCCGCTGAATATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGG‑CC‑TTTTT‑ATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCGGCACATTCATGCCCGGTAATGACCGGATGATTTTCTAAAT  >  NC_000913/3075123‑3075303

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 19 ≤` `ATCG/ATCG` `< 28 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`

GATK/CNVnator alignment

BRESEQ :: bam2aln output

GTGGCATTGCCGCCAAAATATTCGTAGCTGTAGCCCGCTGAATATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGGCC‑TTTTTATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCGGCACATTCATGCCCGGTAATGACCGGATGATTTTCTAAATCGTCGGGTAC  >  NC_000913/3075127‑3075313

GTGGCATTGCCGCCAAAATATTCGTAGCTGTAGCCCGCTGAATATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGGCC‑TTTTT                                                                                               >  SRR4302543.4236018/1‑94 (MQ=60)

 TGGCATTGCCGCCAAAATATTCGTAGCTGTAGCCCGCTAAATATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGGCC‑TTTTTT                                                                                              <  SRR4302543.4041948/94‑1 (MQ=60)

  GGCATTGCCGCCAAAATATTCGTAGCTGTAGCCCGCTGAATATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGGCC‑TTTTTta                                                                                             <  SRR4302543.3832163/94‑3 (MQ=60)

  GGCATTGCCGCCAAAATATTCGTAGCTGTAGCCCGCTGAATATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGGCC‑TTTTTta                                                                                             <  SRR4302543.426280/94‑3 (MQ=60)

  GGCATTGCCGCCAAAATATTCGTAGCTGTAGCCCGCTGAATATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGGCC‑TTTTTta                                                                                             >  SRR4302543.6294776/1‑92 (MQ=60)

   GCATTGCCGCCAAAATATTCGTAGCTGTAGCCCGCTGAATATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGGCC‑TTTTT‑TAT                                                                                           <  SRR4302543.683910/94‑1 (MQ=60)

   GCATTGCCGCCAAAATATTCGTAGCTGTAGCCCGCTGAATATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGGCC‑TTTTT‑TAT                                                                                           <  SRR4302543.2529168/94‑1 (MQ=60)

   GCATTGCCGCCAAAATATTCGTAGCTGTAGCCCGCTGAATATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGGCC‑TTTTT‑TAT                                                                                           <  SRR4302543.1245648/94‑1 (MQ=60)

   GCATTGCCGCCAAAATATTCGTAGCTGTAGCCCGCTGAATATCCGCTTGGTAACCCCATCGCCGATTGCAATACAAAACGCTGGCC‑TTTTT‑TAT                                                                                           <  SRR4302543.3824319/94‑1 (MQ=60)

    CATTGCCGCCAAAATATTCGTAGCTGTAGCCCGCTGAATATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGGCCTTTTTTATA                                                                                            >  SRR4302543.6323974/1‑94 (MQ=60)

    CATTGCCGCCAAAATATTCGTAGCTGTAGCCCGCTGAATATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGGCCTTTTTTATA                                                                                            <  SRR4302543.5481769/94‑1 (MQ=60)

     ATTGCCGCCAAAATATTCGTAGCTGTAGCCCGCTGAATATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGGCCTTTTTTATAT                                                                                           >  SRR4302543.607859/1‑94 (MQ=60)

     ATTGCCGCCAAAATATTCGTAGCTGTAGCCCGCTGAATATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGGCCTTTTTTATAT                                                                                           >  SRR4302543.280253/1‑94 (MQ=60)

     ATTGCCGCCAAAATATTCGTAGCTGTAGCCCGCTGAATATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGGCCTTTTTTATAT                                                                                           >  SRR4302543.280254/1‑94 (MQ=60)

     ATTGCCGCCAAAATATTCGTAGCTGTAGCCCGCTGAATATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGGCCTTTTTTATAT                                                                                           <  SRR4302543.1107536/94‑1 (MQ=60)

     ATTGCCGCCAAAATATTCGTAGCTGTAGCCCGCTGAATATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGGCCTTTTTTATAT                                                                                           <  SRR4302543.3834034/94‑1 (MQ=60)

     ATTGCCGCCAAAATATTCGTAGCTGTAGCCCGCTGAATATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGGCCTTTTTTATAT                                                                                           >  SRR4302543.4183030/1‑94 (MQ=60)

     ATTGCCGCCAAAATATTCGTAGCTGTAGCCCGCTGAATATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGGCCTTTTTTATAT                                                                                           >  SRR4302543.6526649/1‑94 (MQ=60)

     ATTGCCGCCAAAATATTCGTAGCTGTAGCCCGCTGAATATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGGCCTTTTTTATAT                                                                                           <  SRR4302543.5074521/94‑1 (MQ=60)

     ATTGCCGCCAAAATATTCGTAGCTGTAGCCCGCTGAATATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGGCCTTTTTTATAT                                                                                           >  SRR4302543.1739663/1‑94 (MQ=60)

     ATTGCCGCCAAAATATTCGTAGCTGTAGACCGCTGAATATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGGCCTTTTTTATAT                                                                                           >  SRR4302543.5329172/1‑94 (MQ=60)

      TTGCCGCCAAAATATTCGTAGCTGTAGCCCGCTGAATATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGGCCTTTTTTATATT                                                                                          <  SRR4302543.6829661/94‑1 (MQ=60)

      TTGCCGCCAAAATATTCGTAGCTGTAGCCCGCTGAATATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGGCCTTTTTTATATT                                                                                          <  SRR4302543.291357/94‑1 (MQ=60)

       TGCCGCCAAAATATTCGTAGCTGTAGCCCGCTGAATATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGGCCTTTTTTATATTT                                                                                         <  SRR4302543.1038815/94‑1 (MQ=60)

       TGCCGCCAAAATATTCGTAGCTGTAGCCCGCTGAATATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGGCCTTTTTTATATTT                                                                                         <  SRR4302543.2262314/94‑1 (MQ=60)

        GCCGCCAAAATATTCGTAGCTGTAGCCCGCTGAATATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTTGCCTTTTTTATATTTG                                                                                        >  SRR4302543.7902493/1‑94 (MQ=60)

          CGCCAAAATATTCGTAGCTGTAGCCCGCTGAATATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGGCCTTTTTTATATTTGCC                                                                                      >  SRR4302543.4250764/1‑94 (MQ=60)

          CGCCAAAATATTCGTAGCTGTAGCCCGCTGAATATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGGCCTTTTTTATATTTGCC                                                                                      >  SRR4302543.8008366/1‑94 (MQ=60)

           GCCAAAATATTCGTAGCTGTAGCCCGCTGAATATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGGCCTTTTTTATATTTGCCA                                                                                     <  SRR4302543.2046616/94‑1 (MQ=60)

           GCCAAAATATTCGTAGCTGTAGCCCGCTGAATATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGGCCTTTTTTATATTTGCCA                                                                                     <  SRR4302543.3210254/94‑1 (MQ=60)

            GCAAAATATTCGTAGCTGTAGCCCGCTGAATATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGGCCTTTTTTATATTTGCCAG                                                                                    <  SRR4302543.1772541/94‑1 (MQ=60)

            CCAAAATATTCGTAGCTGTAGCCCGCTGAATATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGGCCTTTTTTATATTTGCCAG                                                                                    <  SRR4302543.715195/94‑1 (MQ=60)

              AAAATATTCGTAGCTGTAGCCCGCTGAATATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGGCCTTTTTTATATTTGCCAGTG                                                                                  <  SRR4302543.7637365/94‑1 (MQ=60)

              AAAATATTCGTAGCTGTAGCCCGCTGAATATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGGCCTTTTTTATATTTGCCAGTG                                                                                  <  SRR4302543.1881041/94‑1 (MQ=60)

              AAAATATTCGTAGCTGTAGCCCGCTGAATATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGGCCTTTTTTATATTTGCCAGTG                                                                                  <  SRR4302543.5169698/94‑1 (MQ=60)

               AAATATTCGTAGCTGTAGCCCGCTGAATATCCGCTTGTTACCCCCATCGCCGGTTGCAATACAAAACGCTGGCCTTTTTTATATTTGCCAGTGA                                                                                 <  SRR4302543.5938638/94‑1 (MQ=60)

               AAATATTCGTAGCTGTAGCCCGCTGAATATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGGCCTTTTTTATATTTGCCAGTGA                                                                                 <  SRR4302543.3692748/94‑1 (MQ=60)

                AATATTCGTAGCTGTAGCCCGCTGAATATCCGCTTGGTAACTCCATCGCCGGTTGCAATACAAAACGCTGGCCTTTTTTATATTTGCCAGTGAG                                                                                >  SRR4302543.6781658/1‑94 (MQ=60)

                AATATTCGTAGCTGTAGCCCGCTGAATATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGGCCTTTTTTATATTTGCCAGTGAG                                                                                <  SRR4302543.5276175/94‑1 (MQ=60)

                AATATTCGTAGCTGTAGCCCGCTGAATATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGGCCTTTTTTATATTTGCCAGTGAG                                                                                <  SRR4302543.2885151/94‑1 (MQ=60)

                AATATTCGTAGCTGTAGCCCGCTGAATATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGGCCTTTTTTATATTTGCCAGTGAG                                                                                <  SRR4302543.3050068/94‑1 (MQ=60)

                 ATATTCGTAGCTGTAGCCCGCTGAATATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGGCCTTTTTTATATTTGCCAGTGAGA                                                                               >  SRR4302543.711037/1‑94 (MQ=60)

                  TATTCGTAGCTGTAGCCCGCTGAATATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGGCCTTTTTTATATTTGCCAGTGAGAT                                                                              <  SRR4302543.3806058/94‑1 (MQ=60)

                   ATTCGTAGCTGTAGCCCGCTGAATATCCGCTTGGTACCCCCATCGCCGGTTGCAATACAAAACGCTGGCCTTTTTTATATTTGCCAGTGAGATT                                                                             <  SRR4302543.375139/94‑1 (MQ=60)

                   ATTCGTAGCTGTAGCCCGCTGAATATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAACACGCTGGCCTTTTTTATATTTGCCAGTGAGATT                                                                             >  SRR4302543.7730924/1‑94 (MQ=60)

                   ATTCGTAGCTGTAGCCCGCTGAATATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGGCCTTTTTTATATTTGCCAGTGAGATT                                                                             <  SRR4302543.918700/94‑1 (MQ=60)

                      CGTAGCTGTAGCCCGCTGAATATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGGCCTTTTTTATATTTGCCAGTGAGATTTTT                                                                          >  SRR4302543.574385/1‑94 (MQ=60)

                      CGTAGCTGTAGCCCGCTGAATATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGGCCTTTTTTATATTTGCCAGTGAGATTTTT                                                                          <  SRR4302543.7234560/94‑1 (MQ=60)

                       GTAGCTGTAGCCCGCTGAATATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGGCCTTTTTTATATTTGCCAGTGAGATTTTTA                                                                         >  SRR4302543.5681981/1‑94 (MQ=60)

                       GTAGCTGTAGCCCGCTGAATATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGGCCTTTTTTATATTTGCCAGTGAGATTTTTA                                                                         <  SRR4302543.3011188/94‑1 (MQ=60)

                       GTAGCTGTAGCCCGCTGAATATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGGCCTTTTTTATATTTGCCAGTGAGATTTTTA                                                                         >  SRR4302543.432523/1‑94 (MQ=60)

                       GTAGCTGTAGCCCGCTGAATATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCCGGCCTTTTTTATATTTGCCAGTGAGATTTTTA                                                                         <  SRR4302543.2655377/94‑1 (MQ=60)

                       CTAGCTGTAGCCCGCTGAATATCCGGTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGGCCTTTTTTATATTTGCCAGTGAGATTTTTA                                                                         <  SRR4302543.6745906/94‑1 (MQ=60)

                        TAGCTGTAGCCCGCTGAATATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGGCCTTTTTTATATTTGCCAGTGAGATTTTTAC                                                                        >  SRR4302543.6855677/1‑94 (MQ=60)

                        TAGCTGTAGCCCGCTGAATATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGGCCTTTTTTATATTTGCCAGTGAGATTTTTAC                                                                        <  SRR4302543.6550767/94‑1 (MQ=60)

                        TAGCTGTAGCCCGCTGAATATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGGCCTTTTTTATATTTGCCAGTGAGATTTTTAC                                                                        >  SRR4302543.4219068/1‑94 (MQ=60)

                         AGCTGTAGCCCGCTGAATATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGGCCTTTTTTATATTTGCCAGTGAGATTTTTACC                                                                       <  SRR4302543.2232201/94‑1 (MQ=60)

                         AGCTGTAGCCCGCTGAATATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGGCCTTTTTTATATTTGCCAGTGAGATTTTTACC                                                                       >  SRR4302543.6192551/1‑94 (MQ=60)

                         AGCTGTAGCCCGCTGAATATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGGCCTTTTTTATATTTGCCAGTGAGATTTTTACC                                                                       >  SRR4302543.7477794/1‑94 (MQ=60)

                          GCTGTAGCCCGCTGAATATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGGCCTTTTTTATATTTGCCAGTGAGATTTTTACCC                                                                      >  SRR4302543.2045908/1‑94 (MQ=60)

                           GTGTAGCCCGCTGAATATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGGCCTTTTTTATATTTGCCAGTGAGATTTTTACCCA                                                                     <  SRR4302543.4477424/94‑1 (MQ=60)

                           CTGTAGCCCGCTGAATATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGGCCTTTTTTATATTTGCCAGTGAGATTTTTACCCA                                                                     <  SRR4302543.2330796/94‑1 (MQ=60)

                           CTGTAGCCCGCTGAATATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGGCCTTTTTTATATTTGCCAGTGAGATTTTTACCCA                                                                     >  SRR4302543.5562258/1‑94 (MQ=60)

                            TGTAGCCCGCTGAATATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGGCCTTTTTTATATTTGCCAGTGAGATTTTTACCCAC                                                                    >  SRR4302543.6800993/1‑94 (MQ=60)

                             GTAGCCCGCTGAATATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGGCCTTTTTTATATTTGCCAGTGAGATTTTTACCCACT                                                                   <  SRR4302543.2945604/94‑1 (MQ=60)

                               AGCCCGCTGAATATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGGCCTTTTTTATATTTGCCAGTGAGATTTTTACCCACTTC                                                                 <  SRR4302543.6470568/94‑1 (MQ=60)

                                 CCCGCTGAATATCCGCTTGGTAACCCCCTCGCCCGGTGCAATACCAAACGCTGGCCTTTTTTATATTTGCCAGTGAGATTTTTACCCACTTCGA                                                               >  SRR4302543.935462/1‑94 (MQ=60)

                                 CCCGCTGAATATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGGCCTTTTTTATATTTGCCAGTGAGATTTTTACCCACTTCGA                                                               >  SRR4302543.935461/1‑94 (MQ=60)

                                 CCCGCTGAATATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGGCCTTTTTTATATTTGCCAGTGAGATTTTTACCCACTTCGA                                                               >  SRR4302543.4418089/1‑94 (MQ=60)

                                  CCGCTGAATATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGGCCTTTTTTATATTTGCCAGTGAGATTTTTACCCACTTCGAC                                                              >  SRR4302543.4845099/1‑94 (MQ=60)

                                  CCGCTGAATATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGGCCTTTTTTATATTTGCCAGTGAGATTTTTACCCACTTCGAC                                                              <  SRR4302543.6983303/94‑1 (MQ=60)

                                  CCGCTGAATATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGGCCTTTTTTATATTTGCCAGTGAGATTTTTACCCACTTCGAC                                                              >  SRR4302543.6330709/1‑94 (MQ=60)

                                  CCGCTGAATATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGGCCTTTTTTATATTTGCCAGTGAGATTTTTAACCACTTCGAC                                                              >  SRR4302543.3659267/1‑94 (MQ=60)

                                   CGCTGAATATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGGCCTTTTTTATATTTGCCAGTGAGATTTTTACCCACTTCGACA                                                             <  SRR4302543.7766460/94‑1 (MQ=60)

                                     CTGAATATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGGCCTTTTTTATATTTGCCAGTGAGATTTTTACCCACTTCGACAAT                                                           <  SRR4302543.2989186/94‑1 (MQ=60)

                                     CTGAATATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGGCCTTTTTTATATTTGCCAGTGAGATTTTTACCCACTTCGACAAT                                                           >  SRR4302543.5155895/1‑94 (MQ=60)

                                     CTGAATATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGGCCTTTTTTATATTTGCCAGTGAGATTTTTACCCACTTCGACAAT                                                           <  SRR4302543.2989185/94‑1 (MQ=60)

                                     CTGAATATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGGCCTTTTTTATATTTGCCAGTGAGATTTTTACCCACTTCGACAAT                                                           >  SRR4302543.6142471/1‑94 (MQ=60)

                                     CTGAATATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGGCCTTTTTTATATTTGCCAGTGAGATTTTTACCCACTTCAACAAT                                                           >  SRR4302543.6661959/1‑94 (MQ=60)

                                      TGAATATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGGCCTTTTTTATATTTGCCAGTGAGATTTTTACCCACTTCGACAATA                                                          >  SRR4302543.4231946/1‑94 (MQ=60)

                                      TGAATATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGGCCTTTTTTATATTTGCCAGTGAGATTTTTACCCACTTCGACAATA                                                          >  SRR4302543.2345940/1‑94 (MQ=60)

                                       GAATATCCGCTTGGTACCCCCATCGCCGGTTGCAATACAAAACGCTGGCCTTTTTTATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAA                                                         <  SRR4302543.3163756/94‑1 (MQ=60)

                                       GAATATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGGCCTTTTTTATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAA                                                         >  SRR4302543.3034693/1‑94 (MQ=60)

                                        AATATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGGCCTTTTTTATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAAC                                                        <  SRR4302543.6356202/94‑1 (MQ=60)

                                         ATATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGGCCTTTTTTATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACC                                                       <  SRR4302543.3168503/94‑1 (MQ=60)

                                         ATATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGGCCTTTTTTATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACC                                                       >  SRR4302543.8003385/1‑94 (MQ=60)

                                         ATATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGGCCTTTTTTATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACC                                                       >  SRR4302543.2852507/1‑94 (MQ=60)

                                          TATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGGCCTTTTTTATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCC                                                      <  SRR4302543.6861709/94‑1 (MQ=60)

                                           ATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGGCCTTTTTTATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCC                                                     <  SRR4302543.6155837/94‑1 (MQ=60)

                                            TCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGGCCTTTTTTATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCG                                                    <  SRR4302543.3455470/94‑1 (MQ=60)

                                            TCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGGCCTTTTTTATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCG                                                    >  SRR4302543.4764542/1‑94 (MQ=60)

                                              CGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGGCCTTTTTTATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCGGC                                                  >  SRR4302543.2947089/1‑94 (MQ=60)

                                              CGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGGCCTTTTTTATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCGGC                                                  <  SRR4302543.5600668/94‑1 (MQ=60)

                                               GCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGGCCTTTTTTATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCGGCA                                                 >  SRR4302543.1890298/1‑94 (MQ=60)

                                                CTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGGCCTTTTTTATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCGGCAC                                                >  SRR4302543.1863263/1‑94 (MQ=60)

                                                CTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGGCCTTTTTTATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCGGCAC                                                <  SRR4302543.2438972/94‑1 (MQ=60)

                                                CTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGGCCTTTTTTATATTTGCCAGTGAGATTTTTACCAACTTCGACAATAACCCCGacaa                                                >  SRR4302543.4699961/1‑90 (MQ=60)

                                                 TTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGGCCTTTTTTATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCGGCACA                                               <  SRR4302543.7482246/94‑1 (MQ=60)

                                                  TGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGGCCTTTTTTATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCGGCACAT                                              >  SRR4302543.7590495/1‑94 (MQ=60)

                                                   GGTAACCCCATCGCCGGTTGCAATACAAAACGCTGGCCTTTTTTATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCGGCACATT                                             >  SRR4302543.5632764/1‑94 (MQ=60)

                                                   GGTAACCCCATCGCCGGTTGCAATACAAAACGCTGGCCTTTTTTATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCGGCACATT                                             >  SRR4302543.5578335/1‑94 (MQ=60)

                                                    GTAACCCCATCGCCGGTTGCAATACAAAACGCTGGCCTTTTTTATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCGGCACATTC                                            <  SRR4302543.799284/94‑1 (MQ=60)

                                                    GTAACCCCATCGCCGGTTGCAATACAAAACGCTGGCCTTTTTTATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCGGCACATTC                                            <  SRR4302543.2755805/94‑1 (MQ=60)

                                                      AACCCCATCGCCGGTTGCAATACAAAACGCTGGCCTTTTTTATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCGGCACATTCAT                                          >  SRR4302543.916607/1‑94 (MQ=60)

                                                      AACCCCATCGCCGGTTGCAATACAAAACGCTGGCCTTTTTTATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCGGCACATTCAT                                          <  SRR4302543.5585213/94‑1 (MQ=60)

                                                      AACCCCATCGCCGGTTGCAATACAAAACGCTGGCCTTTTTTATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCGGCACATTCAT                                          <  SRR4302543.4644687/94‑1 (MQ=60)

                                                      AACCCCATCGCCGGTTGCAATACAAAACGCTGGCCTTTTTTATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCGGCACATTCAT                                          <  SRR4302543.3360599/94‑1 (MQ=60)

                                                         CCCATCGCCGGTTGCAATACAAAACGCTGGCCTTTTTTATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCGGCACATTCATGCC                                       >  SRR4302543.5239714/1‑94 (MQ=60)

                                                          CCATCGCCGGTTGCAATACAAAACGCTGGCCTTTTTTATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCGGCACATTCATGCCC                                      >  SRR4302543.5257394/1‑94 (MQ=60)

                                                          CCATCGCCGGTTGCAATACAAAACGCTGGCCTTTTTTATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCGGCACATTCATGCCC                                      >  SRR4302543.526262/1‑94 (MQ=60)

                                                          CCATCGCCGGTTGCAATACAAAACGCTGGCCTTTTTTATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCGGCACATTCATGCCC                                      <  SRR4302543.7198569/94‑1 (MQ=60)

                                                           CATCGCCGGTTGCAATACAAAACGCTGTCCTTTTTTATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCGGCACATTCATGCCCG                                     <  SRR4302543.3464377/94‑1 (MQ=60)

                                                           CATCGCCGGTTGCAATACAAAACGCTGGCCTTTTTTATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCGGCACATTCATGCCCG                                     <  SRR4302543.3464561/94‑1 (MQ=60)

                                                            ATCGCCGGTTGCAATACAAAACGCTGGCCTTTTTTATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCGGCACATTCATGCCCGG                                    >  SRR4302543.3101121/1‑94 (MQ=60)

                                                             TCGCCGGTTGCAATACAAAACGCTGGCCTTTTTTATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCGGCACATTCATGCCCGGT                                   <  SRR4302543.4939368/94‑1 (MQ=60)

                                                             TCGCCGGTTGCAATACAAAACGCTGGCCTTTTTTATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCGGCACATTCATGCCCGGT                                   >  SRR4302543.7801885/1‑94 (MQ=60)

                                                               GCCGGTTGCAATACAAAACGCTGGCCTTTTTTATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCGGCACATTCATGCCCGGTAA                                 <  SRR4302543.6204721/94‑1 (MQ=60)

                                                                CCGGTTGCAATACAAAACGCTGGCCTTTTTTATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCGGCACATTCATGCCCGGTAAT                                <  SRR4302543.1784013/94‑1 (MQ=60)

                                                                CCGGTTGCAATACAAAACGCTGGCCTTTTTTATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCGGCACATTCATGCCCGGTAAT                                <  SRR4302543.4651831/94‑1 (MQ=60)

                                                                CCGGTTGCAATACAAAACGCTGGCCTTTTTTATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCGGCACATTCATGCCCGGTAAT                                <  SRR4302543.604342/94‑1 (MQ=60)

                                                                 CGGTTGCAATACAAAACGCTGGCCTTTTTTATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCGGCACATTCATGCCCGGTAATG                               <  SRR4302543.6292886/94‑1 (MQ=60)

                                                                 CGGTTGCAATACAAAACGCTGGCCTTTTTTATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCGGCACATTCATGCCCGGTAATG                               >  SRR4302543.3527647/1‑94 (MQ=60)

                                                                  GGTTGCAATACAAAACGCTGGCCTTTTTTATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCGGCACATTCATGCCCGGTAATGA                              >  SRR4302543.1200532/1‑94 (MQ=60)

                                                                  GGTTGCAATACAAAACGCTGGCCTTTTTTATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCGGCACATTCATGCCCGGTAATGA                              >  SRR4302543.6389935/1‑94 (MQ=60)

                                                                   GTTGCAATACAAAACGCTGGCCTTTTTTATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCGGCACATTCATGCCCGGTAATGAC                             <  SRR4302543.5280499/94‑1 (MQ=60)

                                                                   GTTGCAATACAAAACGCTGGCCTTTTTTATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCGGCACATTCATGCCCGGTAATGAC                             <  SRR4302543.7035972/94‑1 (MQ=60)

                                                                    TTGCAATACAAAACGCTGGCCTTTTTTATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCGGCACATTCATGCCCGGTAATGACC                            <  SRR4302543.5971745/94‑1 (MQ=60)

                                                                    TTGCAATACAAAACGCTGGCCTTTTTTATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCGGCACATTCATGCCCGGTAATGACC                            <  SRR4302543.1679668/94‑1 (MQ=60)

                                                                    TTGCAATACAAAACGCTGGCCTTTTTTATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCGGCACATTCATGCCCGGTAATGACC                            <  SRR4302543.6234293/94‑1 (MQ=60)

                                                                    TTGCAATACAAAACGCTGGCCTTTTTTATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCGGCACATTCATGCCCGGTAATGACC                            <  SRR4302543.7264138/94‑1 (MQ=60)

                                                                    TTGCAATACAAAACGCTGGCCTTTTTTATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCGGCACATTCATGCCCGGTAATGACC                            >  SRR4302543.504961/1‑94 (MQ=60)

                                                                     TGCAATACAAAACGCTGGCCTTTTTTATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCGGCACATTCATGCCCGGTAATGACCG                           >  SRR4302543.6611942/1‑94 (MQ=60)

                                                                     TGCAATACAAAACGCTGGCCTTTTTTATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCGGCACATTCATGCCCGGTAATGACCG                           <  SRR4302543.30498/94‑1 (MQ=60)

                                                                     TGCAATACAAAACGCTGGCCTTTTTTATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCGGCACATTCATGCCCGGTAATGACCG                           >  SRR4302543.3224440/1‑94 (MQ=60)

                                                                      GCAATACAAAACGCTGGCCTTTTTTATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCGGCACATTCATGCCCGGTAATGACCGG                          <  SRR4302543.3817024/94‑1 (MQ=60)

                                                                      GCAATACAAAACGCTGGCCTTTTTTATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCGGCACATTCATGCCCGGTAATGACCGA                          >  SRR4302543.1638771/1‑94 (MQ=60)

                                                                       CAATACAAAACGCTGGCCTTTTTTATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCGGCACATTCATGCCCGGTAATGACCGGA                         >  SRR4302543.2143299/1‑94 (MQ=60)

                                                                       CAATACAAAACGCTGGCCTTTTTTATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCGGCACATTCATGCCCGGTAATGACCGGA                         >  SRR4302543.5142110/1‑94 (MQ=60)

                                                                        AATACAAAACGCTGGCCTTTTTTATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCGGCACATTCATGCCCGGTAATGACCGGAT                        >  SRR4302543.7322738/1‑94 (MQ=60)

                                                                        AATACAAAACGCTGGCCTTTTTTATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCGGCACATTCATGCCCGGTAATGACCGGAT                        >  SRR4302543.5961183/1‑94 (MQ=60)

                                                                         ATACAAAACGCTGGCCTTTTTTATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCGGCACATTCATGCCCGGTAATGACCGGATG                       >  SRR4302543.2559890/1‑94 (MQ=60)

                                                                         ATACAAAACGCTGGCCTTTTTTATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCGGCACATTCATGCCCGGTAATGACCGGATG                       >  SRR4302543.242180/1‑94 (MQ=60)

                                                                         ATACAAAACGCTGGCCTTTTTTATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCGGCACATTCATGCCCGGTAATGACCGGATG                       <  SRR4302543.4077440/94‑1 (MQ=60)

                                                                           ACAAAACGCTGGCCTTTTTTATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCGGCACATTCATGCCCGGTAATGACCGGATGAT                     >  SRR4302543.4694405/1‑94 (MQ=60)

                                                                            CAAAACGCTGGCCTTTTTTATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCGGCACATTCATGCCCGGTAATGACCGGATGATT                    >  SRR4302543.4474480/1‑94 (MQ=60)

                                                                             AAAACGCTGGCCTTTTTTATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCGGCACATTCATGCCCGGTAATGACCGGATGATTT                   >  SRR4302543.5505343/1‑94 (MQ=60)

                                                                              AAACGCTGGCCTTTTTTATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCGGCACATTCATGCCCGGTAATGACCGGATGATTTT                  >  SRR4302543.802302/1‑94 (MQ=60)

                                                                              AAACGCTGGCCTTTTTTATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCGGCACATTCATGCCCGGTAATGACCGGATGATTTT                  >  SRR4302543.6262127/1‑94 (MQ=60)

                                                                              AAACGCTGGCCTTTTTTATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCGGCACATTCATGCCCGGTAATGACCGGATGATTTT                  <  SRR4302543.1713333/94‑1 (MQ=60)

                                                                              AAACGCTGGCCTTTTTTATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCGGCACATTCATGCCCGGTAATGACCGGATGATTTT                  <  SRR4302543.4644342/94‑1 (MQ=60)

                                                                                ACGCTGGCCTTTTTTATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCGGCACATTCATGCCCGGTAATGACCGGATGATTTTCT                <  SRR4302543.8002062/94‑1 (MQ=60)

                                                                                ACGCTGGCCTTTTTTATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCGGCACATTCATGCCCGGTAATGACCGGATGATTTTCT                <  SRR4302543.1055389/94‑1 (MQ=60)

                                                                                ACGCTGGCCTTTTTTATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCGGCACATTCATGCCCGGTAATGACCGGATGATTTTCT                <  SRR4302543.1433722/94‑1 (MQ=60)

                                                                                  GCTGGCCTTTTTTATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCGGCACATTCATGCCCGGTAATGACCGGATGATTTTCTAA              <  SRR4302543.3619250/94‑1 (MQ=60)

                                                                                  GCTGGCCTTTTTTATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCGGCACATTCATGCCCGGTAATGACCGGATGATTTTCTAA              >  SRR4302543.3411745/1‑94 (MQ=60)

                                                                                   CTGGCCTTTTTTATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCGGCACATTCATGCCCGGTAATGACCGGATGATTTTCTAAA             >  SRR4302543.2833534/1‑94 (MQ=60)

                                                                                   CTGGCCTTTTTTATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCGGCACATTCATGCCCGGTAATGACCGGATGATTTTCTAAA             <  SRR4302543.7598912/94‑1 (MQ=60)

                                                                                   CTGGCCTTTTTTATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCGGCACATTCATGCCCGGTAATGACCGGATGATTTTCTAAA             >  SRR4302543.5307299/1‑94 (MQ=60)

                                                                                    TGGCCTTTTTTATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCGGCACATTCATGCCCGGTAATGACCGGATGATTTTCTAAAT            >  SRR4302543.4447472/1‑94 (MQ=60)

                                                                                    TGGCCTTTTTTATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCGGCACATTCATGCCCGGTAATGACCGGATGATTTTCTAAAT            >  SRR4302543.6008375/1‑94 (MQ=60)

                                                                                    TGGCCTTTTTTATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCGGCACATTCATGCCCGGTAATGACCGGATGATTTTCTAAAT            <  SRR4302543.4149322/94‑1 (MQ=60)

                                                                                    TGGCCTTTTTTATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCGGCACATTCATGCCCGGTAATGACCGGATGATTTTCTAAAT            <  SRR4302543.7376503/94‑1 (MQ=60)

                                                                                    TGGCCTTTTTTATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCGGCACATTCATGCCCGGTAATGACCGGATGATTTTCTAAAT            >  SRR4302543.6008378/1‑94 (MQ=60)

                                                                                    TGGCCTTTTTTATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCGGCACATTCATGCCCGGTAATGACCGGATGATTTTCTAAAT            >  SRR4302543.3633362/1‑94 (MQ=60)

                                                                                     GGCCTTTTTTATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCGGCACATTCATGCCCGGTAATGACCGGATGATTTTCTAAATC           <  SRR4302543.7191104/94‑1 (MQ=60)

                                                                                     GGCCTTTTTTATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCGGCACATTCATGCCCGGTAATGACCGGATGATTTTCTAAATC           <  SRR4302543.2398403/94‑1 (MQ=60)

                                                                                       cctTTTTTATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCGGCACATTCATGCCCGGTAATGACCGGATGATTTTCTAAATCGT         >  SRR4302543.8002080/4‑94 (MQ=60)

                                                                                       CT‑TTTTTATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCGGCACATTCATGCCCGGTAATGACCGGATGATTTTCTAAATCGTC        >  SRR4302543.6499121/1‑94 (MQ=60)

                                                                                       CT‑TTTTTATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCGGCACATTCATGCCCGGTAATGACCGGATGATTTTCTAAATCGTC        <  SRR4302543.3270116/94‑1 (MQ=60)

                                                                                       CT‑TTTTTATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCGGCACATTCATGCCCGGTAATGACCGGATGATTTTCTAAATCGTC        >  SRR4302543.4117539/1‑94 (MQ=60)

                                                                                       CT‑TTTTTATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCGGCACATTCATGCCCGGTAATGACCGGATGATTTTCTAAATCGTC        >  SRR4302543.6835172/1‑94 (MQ=60)

                                                                                       CT‑TTTTTATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCGGCACATTCATGCCCGGTAATGACCGGATGATTTTCTAAATCGTC        <  SRR4302543.4675708/94‑1 (MQ=60)

                                                                                       CT‑TTTTTATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCGGCACATTCATGCCCGGTAATGACCGGATGATTTTCTAAATCGTC        <  SRR4302543.4675707/94‑1 (MQ=60)

                                                                                       CT‑TTTTTATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCGGCACATTCATGCCCGGTAATGACCGGATGATTTTCTAAATCGTC        >  SRR4302543.7297733/1‑94 (MQ=60)

                                                                                        T‑TTTTTATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCGGCACATTCATGCCCGGTAATGACCGGATGATTTTCTAAATCGTCG       <  SRR4302543.7264197/94‑1 (MQ=60)

                                                                                        T‑TTTTTATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCGGCACATTCATGCCCGGTAATGACCGGATGATTTTCTAAATCGTCG       <  SRR4302543.1903908/94‑1 (MQ=60)

                                                                                        T‑TTTTTATATTTGCCAGGTAGATTTTTACCCACTTCGACAATAACCCCGGCACATTCATGCCCGGGAATGACCGGATGATTTTCTAAATCGTCG       <  SRR4302543.4055173/94‑1 (MQ=60)

                                                                                         ttgTTTATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCGGCACATTCATGCCCGGTAATGACCGGATGATTTTCTAAATCGTCG       <  SRR4302543.7139559/91‑1 (MQ=60)

                                                                                          TTTTTATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCGGCACATTCATGCCCGGTAATGACCGGATGATTTTCTAAATCGTCGG      >  SRR4302543.3043913/1‑94 (MQ=60)

                                                                                          TTTTTATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCGGCACATTCATGCCCGGTAATGACCGGATGATTTTCTAAATCGTCGG      >  SRR4302543.1291415/1‑94 (MQ=60)

                                                                                           TTTTATATTTGCCAGTGATATTTTTACCCACCTCGACAATAACCCCGGGACATTCCTGCCCGGTCATGAACGGCTGATTTTCTAAATCGTCGGG     <  SRR4302543.5347519/94‑1 (MQ=60)

                                                                                           TTTTATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCGGCACATTCATGCCCGGTAATGACCGGATGATTTTCTAACTCGTCGGG     >  SRR4302543.2601996/1‑94 (MQ=60)

                                                                                           TTTTATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCGGCACATTCATGCCCGGTAATGACCGGATGATTTTCTAAATCGTCGGG     <  SRR4302543.349536/94‑1 (MQ=60)

                                                                                           TTTTATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCGGCACATTCATGCCCGGTAATGACCGGATGATTTTCTAAATCGTCGGG     >  SRR4302543.2998986/1‑94 (MQ=60)

                                                                                           TTTTATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCGGCACATTCATGCCCGGTAATGACCGGATGATTTTCTAAATCGTCGGG     >  SRR4302543.2601997/1‑94 (MQ=60)

                                                                                              TATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCGGCACATTCATGCCCGGTAATGACCGGATGATTTTCTAAATCGTCGGGTAC  <  SRR4302543.2371464/94‑1 (MQ=60)

GTGGCATTGCCGCCAAAATATTCGTAGCTGTAGCCCGCTGAATATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGGCC‑TTTTTATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCGGCACATTCATGCCCGGTAATGACCGGATGATTTTCTAAATCGTCGGGTAC  >  NC_000913/3075127‑3075313

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 0 ≤` `ATCG/ATCG` `< 5 ≤` `ATCG/ATCG` `< 25 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`