Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A1 F1 I1 R1 1696 279.3 15874187 97.8% 15524954 93.0

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 3,115,116 +C coding (2013/2028 nt) b2974 ← putative endoglucanase

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009133,115,1151.C99.4% 1048.0 / ‑2.1 330coding (2014/2028 nt)b2974putative endoglucanase
Reads supporting (aligned to +/- strand):  ref base . (1/1);  new base C (167/161);  total (168/162)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.99e-01

Only 100 of 354 total aligned reads displayed.

GTTTGCTGGTATCTGCACGCAGCGGGATTGCATAAGGATCGTTACCCACCTGAGTCACATATTCAAAGCCGTTAAGGATCAGCAGCGGCA‑T‑TT‑CTGCGGATCGAGATCGCCATAGCTACTTAAATGCTCAACAGAGATGCCCGCAAAATCCGGATGGAAGTCGAACGCAGCGCTGTTTCC  >  NC_000913/3115023‑3115202
                                                                                               |                                                                                       
 tttGCTGGTATCTGCACGCAGCGGGATTGCATAAGGATCGTTACCCACCTGAGTCACATATTCAAAGCCGTTAAGGATCAGCAGCGGCA‑T‑TT‑c                                                                                        >  1:5551314/1‑93 (MQ=255)
   tGCTGGTATCTGCACGCAGCGGGATTGCATAAGGATCGTTACCCACCTGAGTCTCATATTCAAAGCCGTTAAGGATCAGCAGCGGCA‑T‑TT‑cct                                                                                      <  1:4773257/93‑3 (MQ=255)
     cTGGTATCTGCACGCAGCGGGATTGCATAAGGATCGTTACCCACCTGAGTCACATATTCAAAGCCGTTAAGGATCAGCAGCGGCA‑T‑TT‑cctgc                                                                                    <  2:1407604/93‑5 (MQ=255)
     cTGGTATCTGCACGCAGCGGGATTGCATAAGGATCGTTACCCACCTGAGTCACATATTCAAAGCCGTTAAGGATCAGCAGCGGCA‑T‑TT‑cctgc                                                                                    <  1:442324/93‑5 (MQ=255)
     cTGGTATCTGCACGCAGCGGGATTGCATAAGGATCGTTACCCACCTGAGTCACATATTCAAAGCCGTTAAGGATCAGCAGCGGCA‑T‑TT‑cctgc                                                                                    >  1:1315223/1‑89 (MQ=255)
        gTATCTGCACGCAGCGGGATTGCATAAGGATCGTTACCCACCTGAGTCACATATTCAAAGCCGTTAAGGATCAGCAGCGGCA‑T‑TTCCTGCGGa                                                                                  <  2:828179/93‑1 (MQ=255)
         tATCTGCACGCAGCGGGATTGCATAAGGATCGTTACCCACCTGAGTCACATATTCAAAGCCGTTAAGGATCAGCAGCGGCA‑T‑TTCCTGCGGAt                                                                                 <  1:7174818/93‑1 (MQ=255)
          aTCTGCACGCAGCGGGATTGCATAAGGATCGTTACCCACCTGAGTCACATATTCAAAGCCGTTAAGGATCAGCAGCGGCA‑T‑TTCCTGCGGATc                                                                                >  1:389584/1‑93 (MQ=255)
           tCTGCACGCAGCGGGATTGCATAAGGATCGTTACCCACCTGAGTCACATATTCAAAGCCGTTAAGGATCAGCAGCGGCA‑T‑TTCCTGCGGATCg                                                                               >  1:5226039/1‑93 (MQ=255)
           tCTGCACGCAGCGGGATTGCATAAGGATCGTTACCCACCTGAGTCACATATTCAAAGCCGTTAAGGATCAGCAGCGGCA‑T‑TTCCTGCGGATCg                                                                               >  2:2640533/1‑93 (MQ=255)
             tGCACGCAGCGGGATTGCATAAGGATCGTTACCCACCTGAGTCACATATTCAAAGCCGTTAAGGATCAGCAGCGGCA‑T‑TTCCTGCGGATCgag                                                                             <  1:4334691/93‑1 (MQ=255)
               cACGCAGCGGGATTGCATAAGGATCGTTACCCGCCTGAGTCACATATTCAAAGCCGTTAAGGATCAGCAGCGGCA‑T‑TTCCTGCGGATCGAGAt                                                                           <  2:4983396/93‑1 (MQ=255)
               accGCAGCGGGGTTGCATAAGGATCACTACCCACCTGAGTCCCATATTCAAAGCCGTTAAGGATCAGCAGGGGCA‑T‑TTCCTGGGGATCGAGAt                                                                           <  1:4624921/91‑1 (MQ=255)
                ccGCAGCGGGATGGCATAAGGATCGTTACCCACCTGAGTCACATATTCAAAGCCGGTAAGGATCAGCAGCGGCA‑T‑TTCCTGCGGATCGAGATc                                                                          <  2:5988953/92‑1 (MQ=255)
                aCGCAGCGGGATTGCATAAGGATCGTTACCCACCTGAGTCACATATTCAAAGCCGTTAAGGATCAGCAGCGGCA‑T‑TTCCTGCGGATCGAGATc                                                                          <  1:3005529/93‑1 (MQ=255)
                   cAGCGGGATTGCATAAGGATCGTTACCCACCTGAGTCACATATTCAAAGCCGTTAAGGATCAGCAGCGGCA‑T‑TTCCTGCGGATCGAGATCGca                                                                       >  2:3750588/1‑92 (MQ=255)
                    cgCGGGATTTCATAAGGATCGTTACCCACCTGGGTCACATATTCAAAGCCGTTAAGGATCAGCAGCGGCA‑T‑TTCCTGCGGATCGAGATCGCCa                                                                      <  2:1930411/92‑1 (MQ=255)
                     gCGGGATTGCATAAGGATCGTTACCCACCTGAGTCACATATTCAAAGCCGTTAAGGATCAGCAGCGGCA‑T‑TTCCTGCGGATCGAGATCGCCAt                                                                     <  1:7717419/93‑1 (MQ=255)
                     gCGGGATTGCATAAGGATCGTTACCCACCTGAGTCACATATTCAAAGCCGTTAAGGATCAGCAGCGGCA‑T‑TTCCTGCGGATCGAGATCGCCAt                                                                     >  1:329250/1‑93 (MQ=255)
                     gCGGGATTGCATAAGGATCGTTACCCACCTGAGTCACATATTCAAAGCCGTTAAGGATCAGCAGCGGCA‑T‑TTCCTGCGGATCGAGATCGCCAt                                                                     <  2:91688/93‑1 (MQ=255)
                       gggATTGCATAAGGATCGTTACCCACCTGAGTCACATATTCAAAGCCGTTAAGGATCAGCAGCGGCA‑T‑TTCCTGCGGATCGAGATCGCCATAg                                                                   >  1:929516/1‑93 (MQ=255)
                        ggATTGCATAAGGATCGTTACCCACCTGAGTCACATATTCAAAGCCGTTAAGGATCAGCAGCGGCA‑T‑TTCCTGCGGATCGAGATCGCCATAGc                                                                  >  1:2624655/1‑93 (MQ=255)
                        ggATTGCATAAGGATCGTTACCCACCTGAGTCACATATTCAAAGCCGTTAAGGATCAGCAGCGGCA‑T‑TTCCTGCGGATCGAGATCGCCATAGc                                                                  >  2:6422039/1‑93 (MQ=255)
                        ggATTGCATAAGGATCGTTACCCACCTGAGTCACATATTCAAAGCCGTTAAGGATCAGCAGCGGCA‑T‑TTCCTGCGGATCGAGATCGCCATAGc                                                                  >  2:767607/1‑93 (MQ=255)
                         gATTGCATAAGGATCGTTACCCACCTGAGTCACATATTCAAAGCCGTTAAGGATCAGCAGCGGCA‑T‑TTCCTGCGGATCGAGATCGCCATAGCt                                                                 >  2:4165452/1‑93 (MQ=255)
                          aTTGCATAAGGATCGTTACCCACCTGAGTCACATATTCAAAGCCGTTAAGGATCAGCAGCGGCA‑T‑TTCCTGCGGATCGAGATCGCCATAGCTa                                                                >  2:106869/1‑93 (MQ=255)
                          aTTGCATAAGGATCGTTACCCACCTGAGTCACATATTCAAAGCCGTTAAGGATCAGCAGCGGCA‑T‑TTCCTGCGGATCGAGATCGCCATAGCTa                                                                <  1:120170/93‑1 (MQ=255)
                          aTTGCATAAGGATCGTTACCCACCTGAGTCACATATTCAAAGCCGTTAAGGATCAGCAGCGGCA‑T‑TTCCTGCGGATCGAGATCGCCATAGCTa                                                                >  2:7352986/1‑93 (MQ=255)
                          aTTGCATAAGGATCGTTACCCACCTGAGTCACATATTCAAAGCCGTTAAGGATCAGCAGCGGCA‑T‑TTCCTGCGGATCGAGATCGCCATAGCTa                                                                >  1:2489520/1‑93 (MQ=255)
                           ttGCTTAAGGATCGTTACCCACCCGAGTCACATATTCAAAGCCGGTAAGGATCAGCAGCGGCAGG‑AT‑CCGCGGATCGAGATCGTCATAGCTAc                                                               >  2:7039955/1‑93 (MQ=255)
                           ttGCATAAGGATCGTTACCCACCTGAGTCACATATTCAAAGCCGTTAAGGATCAGCAGCGGCA‑T‑TTCCTGCGGATCGAGATCGCCATAGCTAc                                                               >  2:2786052/1‑93 (MQ=255)
                            tGCATAAGGATCGTTACCCACCTGAGTCACATATTCAAAGCCGTTAAGGATCAGCAGCGGCA‑T‑TTCCTGCGGATCGAGATCGCCATAGCTACt                                                              <  1:669704/93‑1 (MQ=255)
                             gCATAAGGATCGTTACCCACCTGAGTCACATATTCAAAGCCGTTAAGGATCAGCAGCGGCA‑T‑TTCCTGCGGATCGAGATCGCCATAGCTACtt                                                             <  2:183503/93‑1 (MQ=255)
                               aTAAGGATCGTTACCCACCTGAGTCACATATTCAAAGCCGTTAAGGATCAGCAGCGGCA‑T‑TTCCTGCGGATCGAGATCGCCATAGCTACTTaa                                                           >  1:6277558/1‑93 (MQ=255)
                               aTAAGGATCGTTACCCACCTGAGTCACATATTCAAAGCCGTTAAGGATCAGCAGCGGCA‑T‑TTCCTGCGGATCGAGATCGCCATAGCTACTTaa                                                           >  1:3732115/1‑93 (MQ=255)
                               aTAAGGATCGTTACCCACCTGAGTCACATATTCAAAGCCGTTAAGGATCAGCAGCGGCA‑T‑TTCCTGCGGATCGAGATCGCCATAGCTACTTaa                                                           >  1:3206272/1‑93 (MQ=255)
                               aTAAGGATCGTTACCCACCTGAGTCACATATTCAAAGCCGTTAAGGATCAGCAGCGGCA‑T‑TTCCTGCGGATCGAGATCGCCATAGCTACTTaa                                                           >  2:567456/1‑93 (MQ=255)
                                tAAGGATCGTTACCCACCTGAGTCACATATTCAAAGCCGTTAAGGATCAGCAGCGGCA‑T‑TTCCTGCGGATCGAGATCGCCATAGCTACTTaaa                                                          >  1:5340694/1‑93 (MQ=255)
                                tAAGGATCGTTACCCACCTGAGTCACATATTCAAAGCCGTTAAGGATCAGCAGCGGCA‑T‑TTCCTGCGGATCGAGATCGCCATAGCTACTTaaa                                                          <  1:1486945/93‑1 (MQ=255)
                                tAAGGATCGTTACCCACCTGAGTCACATATTCAAAGCCGTTAAGGATCAGCAGCGGCA‑T‑TTCCTGCGGATCGAGATCGCCATAGCTACTTaaa                                                          >  1:7590741/1‑93 (MQ=255)
                                   ggATCGTTACCCACCTGAGTCACATATTCAAAGCCGTTAAGGATCAGCAGCGGCA‑T‑TTCCTGCGGATCGAGATCGCCATAGCTACTTAAATGc                                                       <  2:6872883/93‑1 (MQ=255)
                                   ggATCGTTACCCACCTGAGTCACATATTCAAAGCCGTTAAGGATCAGCAGCGGCA‑T‑TTCCTGCGGATCGAGATCGCCATAGCTACTTAAATGc                                                       >  1:7370642/1‑93 (MQ=255)
                                     aTCGTTACCCACCTGAGTCACATATTCAAAGCCGTTAAGGATCAGCAGCGGCA‑T‑TTCCTGCGGATCGAGATCGCCATAGCTACTTAAATGCta                                                     >  2:200091/1‑92 (MQ=255)
                                     aTCGTTACCCACCTGAGTCACATATTCAAAGCCGTTAAGGATCAGCAGCGGCA‑T‑TTCCTGCGGATCGAGATCGCCATAGCTACTTAAATGCTc                                                     <  2:692458/93‑1 (MQ=255)
                                     aTCGTTACCCACCTGAGTCACATATTCAAAGCCGTTAAGGATCAGCAGCGGCA‑T‑TTCCTGCGGATCGAGATCGCCATAGCTACTTAAATGCTc                                                     <  1:3518266/93‑1 (MQ=255)
                                     aTCGTTACCCACCTGAGTCACATATTCAAAGCCGTTAAGGATCAGCAGCGGCA‑T‑TTCCTGCGGATCGAGATCGCCATAGCTACTTAAATGCTc                                                     >  1:6507245/1‑93 (MQ=255)
                                      tCGTTACCCACCTGAGTCACATATTCAAAGCCGTTAAGGATCAGCAGCGGCA‑T‑TTCCTGCGGATCGAGATCGCCATAGCTACTTaa                                                           <  1:3615303/86‑1 (MQ=255)
                                      tCGTTACCCACCTGAGTCACATATTCAAAGCCGTTAAGGATCAGCAGCGGCA‑T‑TTCCTGCGGATCGAGATCGCCATAGCTACTTaa                                                           >  2:3615302/1‑86 (MQ=255)
                                      tCGTTACCCACCTGAGTCACATATTCAAAGCCGTTAAGGATCAGCAGCGGCA‑T‑TTCCTGCGGATCGAGATCGCCATAGCTACTTAAATGCTCa                                                    <  1:2553292/93‑1 (MQ=255)
                                      tCGTTACCCACCTGAGTCACATATTCAAAGCCGTTAAGGATCAGCAGCGGCA‑T‑TTCCTGCGGATCGAGATCGCCATAGCTACTTAAATGCTCa                                                    >  1:2170702/1‑93 (MQ=255)
                                        gtgaCCCACCTCAGACACATATTCAAAGCCGTTAAGGATCAGCAGCGGCA‑T‑TTCCTGCGGATCGAAAGCGCCATAGCTACTTAAATGCTCAAc                                                  <  2:3356993/90‑1 (MQ=255)
                                        gTTACCCACCTGAGTCACATATTCAAAGCCGTTAAGGATCAGCAGCGGCA‑T‑TTCCTGCGGATCGAGATCGCCATAGCTACTTAAATGCTCAAc                                                  >  1:5030960/1‑93 (MQ=255)
                                        gTTACCCACCTGAGTCACATATTCAAAGCCGTTAAGGATCAGCAGCGGCA‑T‑TTCCTGCGGATCGAGATCGCCATAGCTACTTAAATGCTCAAc                                                  <  1:3925362/93‑1 (MQ=255)
                                        gTTACCCACCTGAGTCACATATTCAAAGCCGTTAAGGATCAGCAGCGGCA‑T‑TTCCTGCGGATCGAGATCGCCATAGCTACTTAAATGCTCAAc                                                  >  1:2126780/1‑93 (MQ=255)
                                          tACCCACCTGAGTCACATATTCAAAGCCGTTAAGGATCAGCAGCGGCA‑T‑TTCCTGCGGATCGAGATCGCCATAGCTACTTAAATGCTCAACag                                                >  1:3800916/1‑93 (MQ=255)
                                          tACCCACCTGAGTCACATATTCAAAGCCGTTAAGGATCAGCAGCGGCA‑T‑TTCCTGCGGATCGAGATCGCCATAGCTACTTAAATGCTCAACag                                                <  1:6422040/93‑1 (MQ=255)
                                           aCCCACCTGAGTCACATATTTAAAGCCGGTAAGGGTCAGAAGTGGCA‑T‑TTCCTGCGGGTCGAGATCGCCGTCGCTAGTTAAATGCTCAACata                                               >  1:3190307/1‑91 (MQ=255)
                                           aCCCACCTGAGTCACATATTCAAAGCCGTTAAGGATCAGCAGCGGCA‑T‑TTCCTGCGGATCGAGATCGCCATAGCTACTTAAATGCTCAACaga                                               <  2:5052424/93‑1 (MQ=255)
                                           aCCCACCTGAGTCACATATTCAAAGCCGTTAAGGATCAGCAGCGGCA‑T‑TTCCTGCGGATCGAGATCGCCATAGCTACTTAAATGCTCAACaga                                               <  2:4076661/93‑1 (MQ=255)
                                           aCCCACCTGAGTCACATATTCAAAGCCGTTAAGGATCAGCAGCGGCA‑T‑TTCCTGCGGATCGAGATCGCCATAGCTACTTAAATGCTCAACaga                                               <  1:1715337/93‑1 (MQ=255)
                                             cccccTGAGTCACATATTCAAAGCCGTTAAGGATCAGCAGCGGCA‑T‑TTCCTGCGGATCGAGATCGCCATAGCTACTTAAATGCTCAACAgaga                                             <  1:5933117/90‑1 (MQ=255)
                                             ccACCTGAGTCACATATTCAAAGCCGTTAAGGATCAGCAGCGGCA‑T‑TTCCTGCGGATCGAGATCGCCATAGCTACTTAAATGCTCAACAgaga                                             >  2:7764892/1‑93 (MQ=255)
                                             ccACCTGAGTCACATATTCAAAGCCGTTAAGGATCAGCAGCGGCA‑T‑TTCCTGCGGATCGAGATCGCCATAGCTACTTAAATGCTCAACAgaga                                             <  2:5174560/93‑1 (MQ=255)
                                               cccTGAGTCACATATTCAAAGCCGTTAAGGATCAGCAGCGGCA‑T‑TTCCTGCGGATCGAGATCGCCATAGCTACTTAAATGCTCAACAGAGATg                                           <  2:5582377/92‑1 (MQ=255)
                                               aCCTGAGTCACATATTCAAAGCCGTTAAGGATCAGCAGCGGCA‑T‑TTCCTGCGGATCGAGATCGCCATAGCTACTTAAATGCTCAACAGAGATg                                           >  2:2985179/1‑93 (MQ=255)
                                                catGAGTCACATATACAAAGCCGTTAAGCATCAGCAGCGGCA‑T‑TTCCTGCGGATCGAGATCGCCATAGCTACTTAAATGCTCAACAGAGATGc                                          <  2:1282210/91‑1 (MQ=255)
                                                 cTGAGTCACATATTCAAAGCCGTTAAGGATCAGCAGCGGCA‑T‑TTCCTGCGGATCGAGATCGCCATAGCTACTTAAATGCTCAACAGAGATGcc                                         <  2:6237333/93‑1 (MQ=255)
                                                 cTGAGTCACATATTCAAAGCCGTTAAGGATCAGCAGCGGCA‑T‑TTCCTGCGGATCGAGATCGCCATAGCTACTTAAATGCTCAACAGAGATGcc                                         >  2:5735538/1‑93 (MQ=255)
                                                 cTGAGTCACATATTCAAAGCCGTTAAGGATCAGCAGCGGCA‑T‑TTCCTGCGGATCGAGATCGCCATAGCTACTTAAATGCTCAACAGAGATGcc                                         >  1:547343/1‑93 (MQ=255)
                                                   gAGTCACATATTCAAAGCCGTTAAGGATCAGCAGCGGCA‑T‑TTCCTGCGGATCGAGATCGACATAGCTACTTAAATGCTCAACAGAGATGCCCg                                       >  2:3879779/1‑93 (MQ=255)
                                                    aGTCACATATTCAAAGCCGTTAAGGATCAGCAGCGGCA‑T‑TTCCTGCGGATCGAGATCGCCATAGCTACTTAAATGCTCAACAGAGATGCCCGc                                      >  1:1982102/1‑93 (MQ=255)
                                                      tCACATATTCAAAGCCGTTAAGGATCAGCAGCGGCA‑T‑TTCCTGCGGATCGAGATCGCCATAGCTACTTAAATGCTCAACAGAGATGCCCGCaa                                    >  2:2733367/1‑93 (MQ=255)
                                                      tCACATATTCAAAGCCGTTAAGGATCAGCAGCGGCA‑T‑TTCCTGCGGATCGAGATCGCCATAGCTACTTAAATGCTCAACAGAGATACCCGCaa                                    <  1:7055291/93‑1 (MQ=255)
                                                        acaTATTCAAAGCCGTTAAGGATCAGCAGCGGCA‑T‑TTCCTGCGGATCGAGATCGCCATAGCTACTTAAATGCTCAACAGAGATGCCCGCaaaa                                  <  2:3130209/93‑1 (MQ=255)
                                                         caTATTCAAAGCCGTTAAGGATCAGCAGCGGCA‑T‑TTCCTGCGGATCGAGATCGCCATAGCTACTTAAATGCTCAACAGAGATGCCCGCAAAAt                                 <  2:5388355/93‑1 (MQ=255)
                                                          atatTCAAAGCCGTTAAGGATCAGCAGCGGCA‑T‑TTCCTGCGGATCGAGATCGCCATAGCTACTTAAATGCTCAACAGAGATGCCCGCAAAATc                                >  2:7163122/1‑93 (MQ=255)
                                                           tatTCAAAGCCGTTAAGGATCAGCAGCGGCA‑T‑TTCCTGCGGATCGAGATCGCCATAGCTACTTAAATGCTCAACAGAGATGCCCGCAAAATcc                               >  2:2868384/1‑93 (MQ=255)
                                                           tatTCAAAGCCGTTAAGGATCAGCAGCGGCA‑T‑TTCCTGCGGATCGAGATCGCCATAGCTACTTAAATGCTCAACAGAGATGCCCGCAAAATcc                               >  2:7865241/1‑93 (MQ=255)
                                                              tCAAAGCCGTTAAGGATCAGCAGCGGCA‑T‑TTCCTGCGGATCGAGATCGCCATAGCTACTTAAATGCTCAACAGAGATGCCCGCAAAATCCGGa                            >  2:1660029/1‑93 (MQ=255)
                                                                 aaGCCGTTAAGGATCAGCAGCGGCA‑T‑TTCCTGCGGATCGAGATCGCCATAGCTACTTAAATGCTCAACAGAGATGCCCGCAAAATCCGGATgg                         >  1:3345660/1‑93 (MQ=255)
                                                                  aGCCGTTAAGGATCAGCAGCGGCA‑T‑TTCCTGCGGATCGAGATCGCCATAGCTACTTAAATGCTCAACAGAGATGCCCGCAAAATCCGGATGGa                        >  2:1315230/1‑93 (MQ=255)
                                                                   gCCGTTAAGGATCAGCAGCGGCA‑T‑TTCCTGCGGATCGAGATCGCCATAGCTACTTAAATGCTCAACAGAGATGCCCGCAAAATCCGGATGGaa                       >  1:1095818/1‑93 (MQ=255)
                                                                   gCCGTTAAGGATCAGCAGCGGCA‑T‑TTCCTGCGGATCGAGATCGCCATAGCTACTTAAATGCTCAACAGAGATGCCCGCAAAATCCGGATGGaa                       >  1:2681659/1‑93 (MQ=255)
                                                                    ccGTTAAGGATCAGCAGCGGCA‑T‑TTCCTGCGGATCGAGATCGCCATAGCTACTTAAATGCTCAACAGAGATGCCCGCAAAATCCGGATGGAAg                      <  2:6799598/93‑1 (MQ=255)
                                                                     cGTTAAGGATCAGCAGCGGCA‑T‑TTCCTGCGGATCGAGATCGCCATAGCTACTTAAATGCTCAACAGAGATGCCCGCAAAATCCGGATGGAAGt                     >  1:7520053/1‑93 (MQ=255)
                                                                      gTTAAGGATCAGCAGCGTCA‑T‑TTCCTGCGGATCGAGATCGCCATAGCTACTTAAATGCTCAACAGAGATGCCCGCAAAATCCGGATGGAAGTc                    <  1:4676095/93‑1 (MQ=255)
                                                                       ttAAGGATCAGCAGCGGCA‑T‑TTCCTGCGGATCGAGATCGCCATAGCTACTTAAATGCTCAACAGAGATGCCCGCAAAATCCGGATGGAAGTCg                   >  2:4582528/1‑93 (MQ=255)
                                                                       ttAAGGATCAGCAGCGGCA‑T‑TTCCTGCGGATCGAGATCGCCATAGCTACTTAAATGCTCAACAGAGATGCCCGCAAAATCCGGATGGAAGTCg                   >  2:2502991/1‑93 (MQ=255)
                                                                         aaGGATCAGCAGCGGCA‑T‑TTCCTGCGGATCGAGATCGCCATAGCTACTTAAATGCTCAACAGAGATGCCCGCAAAATCCGGATGGAAGTCGaa                 <  2:4390441/93‑1 (MQ=255)
                                                                         aaGGATCAGCAGCGGCA‑T‑TTCCTGCGGATCGAGATCGCCATAGCTACTTAAATGCTCAACAGAGATGCCCGCAAAATCCGGATGGAAGTCGaa                 <  2:5959792/93‑1 (MQ=255)
                                                                          aGGATCAGCAGCGGCA‑T‑TTCCTGCGGATCGAGATCGCCATAGCTACTTAAATGCTCAACAGAGATGCCCGCAAAATCCGGATGGAAGTCGAAc                >  2:2203955/1‑93 (MQ=255)
                                                                             aTCAGCAGCGGCA‑T‑TTCCTGCGGATCGAGATCGCCATAGCTACTTAAATGCTCAACAGAGATGCCCGCAAAATCCGGATGGAAGTCGAACGCa             <  2:7296612/93‑1 (MQ=255)
                                                                             aTCAGCAGCGGCA‑T‑TTCCTGCGGATCGAGATCGCCATAGCTACTTAAATGCTCAACAGAGATGCCCGCAAAATCCGGATGGAAGTCGAACGCa             <  1:6656181/93‑1 (MQ=255)
                                                                              tCAGCAGCGGCA‑T‑TTCCTGCGGATCGAGATCGCCATAGCTACTTAAATGCTCAACAGAGATGCCCGCAAAATCCGGATGGAAGTCGAACGCAg            >  1:6929628/1‑93 (MQ=255)
                                                                               cagcagCGGCA‑TGTC‑CTGCGGATCGAGATCGCCATAGCTACTTAAATGCTCAACAGAGATGCCCGCAAAATCCGGATGGAAGTCGAACGCAgc           <  2:48209/93‑1 (MQ=255)
                                                                                 gcagcGGCA‑T‑TTCCTGCGGATCGAGATCGCCATAGCTACTTAAATGCTCAACAGAGATGCCCGCAAAATCCGGATGGAAGTCGAACGCAgcgc         <  2:4636619/93‑1 (MQ=255)
                                                                                 gcagcGGCA‑T‑TTCCTGCGGATCGAGATCGCCATAGCTACTTAAATGCTCAACAGAGATGCCCGCAAAATCCGGATGGAAGTCGAACGCAgcgc         >  1:581365/1‑93 (MQ=255)
                                                                                   agcGGCA‑T‑TTCCTGCGGATCGAGATCGCCATAGCTACTTAAATGCTCAACAGAGATGCCCGCAAAATCCGGATGGAAGTCGAACGCAGCGCTg       >  2:1596147/1‑93 (MQ=255)
                                                                                     cGGCA‑T‑TTCCTGCGGATCGAGATCGCCATAGCTACTTAAATGCTCAACAGAGATGCCCGCAAAATCCGGATGGAAGTCGAACGCAGCGCTGtt     <  1:4584054/93‑1 (MQ=255)
                                                                                       gCA‑T‑TTCCTGCGGATCGAGATCGCCATAGCTACTTAAATGCTCAACAGAGATGCCCGCAAAATCCGGATGGAAGTCGAACGCAGCGCTGTTTc   >  2:2338069/1‑93 (MQ=255)
                                                                                               |                                                                                       
GTTTGCTGGTATCTGCACGCAGCGGGATTGCATAAGGATCGTTACCCACCTGAGTCACATATTCAAAGCCGTTAAGGATCAGCAGCGGCA‑T‑TT‑CTGCGGATCGAGATCGCCATAGCTACTTAAATGCTCAACAGAGATGCCCGCAAAATCCGGATGGAAGTCGAACGCAGCGCTGTTTCC  >  NC_000913/3115023‑3115202

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

BRESEQ :: bam2aln output
GTTTGCTGGTATCTGCACGCAGCGGGATTGCATAAGGATCGTTACCCACCTGAGTCACATATTCAAAGCCGTTAAGGATCAGCAGCGGCATTT‑CTGCGGATCGAGATCGCCATAGCTACTTAAATGCTCAACAGAGATGCCCGCAAAATCCGGATGGAAGTCGAACGCAGCGCTGTTTCCTGTAACC  >  NC_000913/3115023‑3115209
                                                                                              |                                                                                             
GTTTGCTGGTATCTGCACGCAGCGGGATTGCATAAGGATCGTTACCCACCTGAGTCACATATTCAAAGCCGTTAAGGATCAGCAGCGGCATTT‑C                                                                                               >  SRR4302543.5601795/1‑94 (MQ=60)
GTTTGCTGGTATCTGCACGCAGCGGGATTGCATAAGGATCGTTACCCACCTGAGTCACATATTCAAAGCCGTTAAGGATCAGCAGCGGCATTT‑C                                                                                               >  SRR4302543.254648/1‑94 (MQ=60)
   TGCTGGTATCTGCACGCAGCGGGATTGCATAAGGATCGTTACCCACCTGAGTCTCATATTCAAAGCCGTTAAGGATCAGCAGCGGCATTT‑Cctg                                                                                            <  SRR4302543.4816883/94‑4 (MQ=60)
   TGCTGGTATCTGCACGCAGCGGGATTGCATAAGGATCGTTACCCACCTGAGTCACATATTCAAAGCCGTTAAGGATCAGCAGCGGCATTT‑Cctg                                                                                            <  SRR4302543.6439448/94‑4 (MQ=60)
   TGCTGGTATCTGCACGCAGCGGGATTGCATAAGGATCGTTACCCACCTGAGTCACATATTCAAAGCCGTTAAGGATCAGCAGCGGCATTT‑Cctg                                                                                            <  SRR4302543.596478/94‑4 (MQ=60)
   TGCTGGTATCTGCACGCAGCGGGATTGCATAAGGATCGTTACCCACCTGAGTCACATATTCAAAGCCGTTAAGGATCAGCAGCGGCATTT‑Cctg                                                                                            <  SRR4302543.2783643/94‑4 (MQ=60)
    GCTGGTATCTGCACGCAGCGGGATTGCATAAGGATCGTTACCCACCTGAGTCACATATTCAAAGCCGTTAAGGATCAGCAGCGGCATTTCCTGC                                                                                            >  SRR4302543.1326913/1‑94 (MQ=60)
     GTGGTATCTGCACGCAGCGGGATTGCATAAGGATCGTTACCCACCTGAGTCACATATTCAAAGCCGTTAAGGATCAGCAGCGGCATTTCCTGCG                                                                                           <  SRR4302543.446460/94‑1 (MQ=60)
     CTGGTATCTGCACGCAGCGGGATTGCATAAGGATCGTTACCCACCTGAGTCACATATTCAAAGCCGTTAAGGATCAGCAGCGGCATTTCCTGCG                                                                                           >  SRR4302543.3647747/1‑94 (MQ=60)
     CTGGTATCTGCACGCAGCGGGATTGCATAAGGATCGTTACCCACCTGAGTCACATATTCAAAGCCGTTAAGGATCAGCAGCGGCATTTCCTGCG                                                                                           <  SRR4302543.446459/94‑1 (MQ=60)
     CTGGTATCTGCACGCAGCGGGATTGCATAAGGATCGTTACCCACCTGAGTCACATATTCAAAGCCGTTAAGGATCAGCAGCGGCATTT‑Cctggg                                                                                          <  SRR4302543.4556526/94‑6 (MQ=60)
      TGGTATCTGCACGCAGCGGGATTGCATAAGGATCGTTACCCACCTGAGTCACATATTCAAAGCCGTTAAGGATCAGCAGCGGCATTTCCTGCGG                                                                                          <  SRR4302543.1367006/94‑1 (MQ=60)
      TGGTATCTGCACGCAGCGGGATTGCATAAGGATCGTTACCCACCTGAGTCACATATTCAAAGCCGTTAAGGATCAGCAGCGGCATTTCCTGCGG                                                                                          >  SRR4302543.5197264/1‑94 (MQ=60)
      TGGTATCTGCACGCAGCGGGATTGCATAAGGATCGTTACCCACCTGAGTCACATATTCAAAGCCGTTAAGGATCAGCAGCGGCATTTCCTGCGG                                                                                          >  SRR4302543.5377384/1‑94 (MQ=60)
        GTATCTGCACGCAGCGGGATTGCATAAGGATCGTTACCCACCTGAGTCACATATTCAAAGCCGTTAAGGATCAGCAGCGGCATTTCCTGCGGAT                                                                                        <  SRR4302543.1192098/94‑1 (MQ=60)
         TATCTGCACGCAGCGGGATTGCATAAGGATCGTTACCCACCTGAGTCACATATTCAAAGCCGTTAAGGATCAGCAGCGGCATTTCCTGCGGATC                                                                                       >  SRR4302543.4456894/1‑94 (MQ=60)
         TATCTGCACGCAGCGGGATTGCATAAGGATCGTTACCCACCTGAGTCACATATTCAAAGCCGTTAAGGATCAGCAGCGGCATTTCCTGCGGATC                                                                                       <  SRR4302543.5747622/94‑1 (MQ=60)
         TATCTGCACGCAGCGGGATTGCATAAGGATCGTTACCCACCTGAGTCACATATTCAAAGCCGTTAAGGATCAGCAGCGGCATTTCCTGCGGATC                                                                                       >  SRR4302543.393183/1‑94 (MQ=60)
         TATCTGCACGCAGCGGGATTGCATAAGGATCGTTACCCACCTGAGTCACATATTCAAAGCCGTTAAGGATCAGCAGCGGCATTTCCTGCGGATC                                                                                       <  SRR4302543.7244474/94‑1 (MQ=60)
          ATCTGCACGCAGCGGGATTGCATAAGGATCGTTACCCACCTGAGTCACATATTCAAAGCCGTTAAGGATCAGCAGCGGCATTTCCTGCGGATCG                                                                                      >  SRR4302543.7611000/1‑94 (MQ=60)
          ATCTGCACGCAGCGGGATTGCATAAGGATCGTTACCCACCTGAGTCACATATTCAAAGCCGTTAAGGATCAGCAGCGGCATTTCCTGCGGATCG                                                                                      >  SRR4302543.634098/1‑94 (MQ=60)
          ATCTGCACGCAGCGGGATTGCATAAGGATCGTTACCCACCTGAGTCACATATTCAAAGCCGTTAAGGATCAGCAGCGGCATTTCCTGCGGATCG                                                                                      >  SRR4302543.5273094/1‑94 (MQ=60)
          ATCTGCACGCAGCGGGATTGCATAAGGATCGTTACCCACCTGAGTCACATATTCAAAGCCGTTAAGGATCAGCAGCGGCATTTCCTGCGGATCG                                                                                      <  SRR4302543.6544828/94‑1 (MQ=60)
           TCTGCACGCAGCGGGATTGCATAAGGATCGTTACCCACCTGAGTCACATATTCAAAGCCGTTAAGGATCAGCAGCGGCATTTCCTGCGGATCGA                                                                                     >  SRR4302543.3949750/1‑94 (MQ=60)
           TCTGCACGCAGCGGGATTGCATAAGGATCGTTACCCACCTGAGTCACATATTCAAAGCCGTTAAGGATCAGCAGCGGCATTTCCTGCGGATCGA                                                                                     >  SRR4302543.3677266/1‑94 (MQ=60)
            CTGCACGCAGCGGGATTGCATAAGGATCGTTACCCACCTGAGTCACATATTCAAAGCCGCTAAGGATCAGCAGCGGCATTTCCTGCGGATCGAG                                                                                    >  SRR4302543.3398684/1‑94 (MQ=60)
             TGCACGCAGCGGGATTGCATAAGGATCGTTACCCACCTGAGTCACATATTCAAAGCCGTTAAGGATCAGCAGCGGCATTTCCTGCGGATCGAGA                                                                                   <  SRR4302543.4374012/94‑1 (MQ=60)
              GCACGCAGCGGGATTGCATAAGGATCGTTACCCACCTGAGTCACATATTCAAAGCCGTTAAGGATCAGCAGCGGCATTTCCTGCGGATCGAGAT                                                                                  <  SRR4302543.3822343/94‑1 (MQ=60)
               acCGCAGCGGGGTTGCATAAGGATCACTACCCACCTGAGTCCCATATTCAAAGCCGTTAAGGATCAGCAGGGGCATTTCCTGGGGATCGAGATC                                                                                 <  SRR4302543.4666940/92‑1 (MQ=60)
               CACGCAGCGGGATTGCATAAGGATCGTTACCCACCTGAGTCACATATTCAAAGCCGTTAAGGATCAGCAGCGGCATTTCCTGCGGATCGAGATC                                                                                 <  SRR4302543.2323656/94‑1 (MQ=60)
                ACGCAGCGGGATTGCATAAGGATCGTTACCCACCTGAGTCACATATTCAAAGCCGTTAAGGATCAGCAGCGGCATTTCCTGCGGATCGAGATCG                                                                                <  SRR4302543.45064/94‑1 (MQ=60)
                ACGCAGCGGGATTGCATAAGGATCGTTACCCACCTGAGTCACATATTCAAAGCCGTTAAGGATCAGCAGCGGCATTTCCTGCGGATCGAGATCG                                                                                <  SRR4302543.6992770/94‑1 (MQ=60)
                ACGCAGCGGGATTGCATAAGGATCGTTACCCACCTGAGTCACATATTCAAAGCCGTTAAGGATCAGCAGCGGCATTTCCTGCGGATCGAGATCG                                                                                <  SRR4302543.3032761/94‑1 (MQ=60)
                 CGCAGCGGGATTGCATAAGGATCGTTACCCACCTGAGTCACATATTCAAAGCCGTTAAGGATCAGCAGCGGCATTTCCTGCGGATCGAGATCGC                                                                               >  SRR4302543.5518744/1‑94 (MQ=60)
                 CGCAGCGGGATTGCATAAGGATCGTTACCCACCTGAGTCACATATTCAAAGCCGTTAAGGATCAGCAGCGGCATTTCCTGCGGATCGAGATCGC                                                                               >  SRR4302543.1496557/1‑94 (MQ=60)
                  GCAGCGGGATTGCATAAGGATCGTTACCCACCTGAGTCACATATTCAAAGCCGTTAAGGATCAGCAGCGGCATTTCCTGCGGATCGAGATCGCC                                                                              <  SRR4302543.3863524/94‑1 (MQ=60)
                   CAGCGGGATTGCATAAGGATCGTTACCCACCTGAGTCACATATTCAAAGCCGTTAAGGATCAGCAGCGGCATTTCCTGCGGATCGAGATCGCCA                                                                             >  SRR4302543.7973871/1‑94 (MQ=60)
                    AGCGGGATTGGATAAGGATCGTGACCCACCTGAGTCACATATTCAAAGCCGTTAAGGATCAGCAGCGGCATTTCCTGCGGATCGAGATCGCCAT                                                                            <  SRR4302543.2668449/94‑1 (MQ=60)
                    AGCGGGATTGCATAAGGATCGTTACCCACCTGAGTCACATATTCAAAGCCGTTAAGGATCAGCAGCGGCATTTCCTGCGGATCGAGATCGCCAT                                                                            <  SRR4302543.376909/94‑1 (MQ=60)
                    AGCGGGATTGCATAAGGATCGTTACCCACCTGAGTCACATATTCAAAGCCGTTAAGGATCAGCAGCGGCATTTCCTGCGGATCGAGATCGCCAT                                                                            <  SRR4302543.368600/94‑1 (MQ=60)
                    AGCGGGATTGCATAAGGATCGTTACCCACCTGAGTCACATATTCAAAGCCGTTAAGGATCAGCAGCGGCATTTCCTGCGGATCGAGATCGCCAT                                                                            <  SRR4302543.6537101/94‑1 (MQ=60)
                    AGCGGGATTGCATAAGGATCGTTACCCACCTGAGTCACATATTCAAAGCCGTTAAGGATCAGCAGCGGCATTTCCTGCGGATCGAGATCGCCAT                                                                            <  SRR4302543.7242178/94‑1 (MQ=60)
                    AGCGGGATTGCATAAGGATCGTTACCCACCTGAGTCACATATTCAAAGCCGTTAAGGATCAGCAGCGGCATTTCCTGCGGATCGAGATCGCCAT                                                                            >  SRR4302543.332263/1‑94 (MQ=60)
                     GCGGGATTGCATAAGGATCGTTACCCACCTGAGTCACATATTCAAAGCCGTTAAGGATCAGCAGCGGCATTTCCTGCGGATCGAGATCGCCATA                                                                           <  SRR4302543.2276680/94‑1 (MQ=60)
                     GCGGGATTGCATAAGGATCGTTACCCACCTGAGTCACATATTCAAAGCCGTTAAGGATCAGCAGCGGCATTTCCTGCGGATCGAGATCGCCATA                                                                           <  SRR4302543.7790401/94‑1 (MQ=60)
                      CGGGATTGCATAAGGATCGTTACCCACCTGAGTCACATATTCAAAGCCGTTAAGGATCAGCAGCGGCATTTCCTGCGGATCGAGATCGCCATAG                                                                          <  SRR4302543.519725/94‑1 (MQ=60)
                      CGGGATTGCATAAGGATCGTTACCCACCTGAGTCACATATTCAAAGCCGTTAAGGATCAGCAGCGGCATTTCCTGCGGATCGAGATCGCCATAG                                                                          >  SRR4302543.937639/1‑94 (MQ=60)
                       GGGATTGCATAAGGATCGTTACCCACCTGAGTCACATATTCAAAGCCGTTAAGGATCAGCAGCGGCATTTCCTGCGGATCGAGATCGCCATAGC                                                                         >  SRR4302543.2437212/1‑94 (MQ=60)
                       GGGATTGCATAAGGATCGTTACCCACCTGAGTCACATATTCAAAGCCGTTAAGGATCAGCAGCGGCATTTCCTGCGGATCGAGATCGCCATAGC                                                                         <  SRR4302543.3981967/94‑1 (MQ=60)
                       GGGATTGCATAAGGATCGTTACCCACCTGAGTCACATATTCAAAGCCGTTAAGGATCAGCAGCGGCATTTCCTGCGGATCGAGATCGCCATAGC                                                                         >  SRR4302543.2648416/1‑94 (MQ=60)
                       GGGATTGCATAAGGACCGTTACCCCCCTGAGTCACATATTCAAAGCCGTTAAGGATCAGCAGCGGCATTTCCTGCGGATCGAGATCGCCATAGT                                                                         >  SRR4302543.2081357/1‑94 (MQ=60)
                         GATTGCATAAGGATCGTTACCCACCTGAGTCACATATTCAAAGCCGTTAAGGATCAGCAGCGGCATTTCCTGCGGATCGAGATCGCCATAGCTA                                                                       >  SRR4302543.2512079/1‑94 (MQ=60)
                          ATTGCATAAGGATCGTTACCCACCTGAGTCACATATTCAAAGCCGTTAAGGATCAGCAGCGGCATTTCCTGCGGATCGAGATCGCCATAGCTAC                                                                      <  SRR4302543.121253/94‑1 (MQ=60)
                          ATTGCATAAGGATCGTTACCCACCTGAGTCACATATTCAAAGCCGTTAAGGATCAGCAGCGGCATTTCCTGCGGATCGAGATCGCCATAGCTAC                                                                      >  SRR4302543.4589510/1‑94 (MQ=60)
                           TTGCATAAGGATCGTTACCCACCTGAGTCACATATTCAAAGCCGTTAAGGATCAGCAGCGGCATTTCCTGCGGATCGAGATCGCCATAGCTACT                                                                     >  SRR4302543.2589358/1‑94 (MQ=60)
                            TGCATAAGGATCGTTACCCACCTGAGTCACATATTCAAAGCCGTTAAGGATCAGCAGCGGCATTTCCTGCGGATCGAGATCGCCATAGCTACTT                                                                    <  SRR4302543.675872/94‑1 (MQ=60)
                             GCATAAGGATCGTTACCCACCTGAGTCACATATTCAAAGCCGTTAAGGATCAGCAGCGGCATTTCCTGCGGATCGAGATCGCCATAGCTACTTA                                                                   >  SRR4302543.6730982/1‑94 (MQ=60)
                              CATAAGGATCGTTACCCACCTGAGTCACATATTCAAAGCCGTTTAGGATCAGCAGCGGCATTTCCTGCGGATCGAGATCGCCATAGCTACTTAA                                                                  >  SRR4302543.3299532/1‑94 (MQ=60)
                              CATAAGGATCGTTACCCACCTGAGTCACATATTCAAAGCCGTTAAGGATCAGCAGCGGCATTTCCTGCGGATCGAGATCGCCATAGCTACTTAA                                                                  >  SRR4302543.3764937/1‑94 (MQ=60)
                              CATAAGGATCGTTACCCACCTGAGTCACATATTCAAAGCCGTTAAGGATCAGCAGCGGCATTTCCTGCGGATCGAGATCGCCATAGCTACTTAA                                                                  >  SRR4302543.3235201/1‑94 (MQ=60)
                              CATAAGGATCGTTACCCACCTGAGTCACATATTCAAAGCCGTTAAGGATCAGCAGCGGCATTTCCTGCGGATCGAGATCGCCATAGCTACTTAA                                                                  <  SRR4302543.1865305/94‑1 (MQ=60)
                              CATAAGGATCGTTACCCACCTGAGTCACATATTCAAAGCCGTTAAGGATCAGCAGCGGCATTTCCTGCGGATCGAGATCGCCATAGCTACTTAA                                                                  >  SRR4302543.6336734/1‑94 (MQ=60)
                              CATAAGGATCGTTACCCACCTGAGTCACATATTCAAAGCCGTTAAGGATCAGCAGCGGCATTTCCTGCGGATCGAGATCGCCATAGCTACTTAA                                                                  >  SRR4302543.3393101/1‑94 (MQ=60)
                               cactctATCGTTACCCACCTGAGTCACATATTCAAAGCCGTTAAGGATCAGCAGCGGCATTTCCTGCGGATCGAGATCGCCATAGCTACTTAAA                                                                 <  SRR4302543.3647178/88‑1 (MQ=60)
                               ATAAGGATTGTTACCCACCTGAGTCACATATTCAAAGCCGTTAAGGATCAGCAGCGGCATTTCCTGCGGATCGAGATCGCCATAGCTACTTAAA                                                                 >  SRR4302543.114295/1‑94 (MQ=60)
                               ATAAGGATCGTTACCCACCTGAGTCACATATTCAAAGCCGTTAAGGATCAGCAGCGGCATTTCCTGCGGATCGAGATCGCCATAGCTACTTAAA                                                                 >  SRR4302543.26694/1‑94 (MQ=60)
                               ATAAGGATCGTTACCCACCTGAGTCACATATTCAAAGCCGTTAAGGATCAGCAGCGGCATTTCCTGCGGATCGAGATCGCCATAGCTACTTAAA                                                                 >  SRR4302543.7662862/1‑94 (MQ=60)
                               ATAAGGATCGTTACCCACCTGAGTCACATATTCAAAGCCGTTAAGGATCAGCAGCGGCATTTCCTGCGGATCGAGATCGCCATAGCTACTTAAA                                                                 >  SRR4302543.3861406/1‑94 (MQ=60)
                               ATAAGGATCGTTACCCACCTGAGTCACATATTCAAAGCCGTTAAGGATCAGCAGCGGCATTTCCTGCGGATCGAGATCGCCATAGCTACTTAAA                                                                 >  SRR4302543.3350481/1‑94 (MQ=60)
                               ATAAGGATCGTTACCCACCTGAGTCACATATTCAAAGCCGTTAAGGATCAGCAGCGGCATTTCCTGCGGATCGAGATCGCCATAGCTACTTAAA                                                                 >  SRR4302543.5389008/1‑94 (MQ=60)
                               ATAAGGATCGTTACCCACCTGAGTCACATATTCAAAGCCGTTAAGGATCAGCAGCGGCATTTCCTGCGGATCGAGATCGCCATAGCTACTTAAA                                                                 >  SRR4302543.708721/1‑94 (MQ=60)
                                TAAGGATCGTTACCCACCTGAGTCACATATTCAAAGCCGTTAAGGATCAGCAGCGGCATTTCCTGCGGATCGAGATCGCCATAGCTACTTAAAT                                                                <  SRR4302543.1215587/94‑1 (MQ=60)
                                TAAGGATCGTTACCCACCTGAGTCACATATTCAAAGCCGTTAAGGATCAGCAGCGGCATTTCCTGCGGATCGAGATCGCCATAGCTACTTAAAT                                                                <  SRR4302543.1500323/94‑1 (MQ=60)
                                 AAGGATCGTTACCCACCTGAGTCACATATTCAAAGCCGTTAAGGATCAGCAGCGGCATTTCCTGCGGATCGAGATCGCCATAGCTACTTAAATG                                                               >  SRR4302543.895611/1‑94 (MQ=60)
                                  AGGATCGTTACCCACCTGAGTCACATATTCAAAGCCGTTAAGGATCAGCAGCGGCATTTCCTGCGGATCGAGATCGCCATAGCTACTTAAATGC                                                              >  SRR4302543.7441506/1‑94 (MQ=60)
                                  AGGATCGTTACCCACCTGAGTCACACATTCAAAGCCGTTAAGGATCAGCAGCGGCATTTCCTGCGGATCGAGATCGCCATAGCTACTTAAATGC                                                              >  SRR4302543.1058888/1‑94 (MQ=60)
                                   GGATCGTTACCCACCTGAGTCACATATTCAAAGCCGTTAAGGATCAGCAGCGGCATTTCCTGCGGATCGAGATCGCCATAGCTACTTAAATGCT                                                             >  SRR4302543.3553311/1‑94 (MQ=60)
                                    GATCGTTACCCACCTGAGTCACATATTCAAAGCCGTTAAGGATCAGCAGCGGCATTTCCTGCGGATCGAGATCGCCATAGCTACTTAAATGCTC                                                            >  SRR4302543.6568545/1‑94 (MQ=60)
                                     ATCGTTACCCACCTGAGTCACATATTCAAAGCCGTTAAGGATCAGCTGCGACATTTCCTGCGGATCTAGATCCCCATAGCTACTTAAATGCTCA                                                           <  SRR4302543.3324049/94‑1 (MQ=60)
                                     ATCGTTACCCACCTGAGTCACATATTCAAAGCCGTTAAGGATCAGCAGCGGCATTTCCTGCGGGTCGAGATCGCCATAGCTACTTAAATGATCA                                                           >  SRR4302543.2152400/1‑94 (MQ=60)
                                     ATCGTTACCCACCTGAGTCACATATTCAAAGCCGTTAAGGATCAGCAGCGGCATTTCCTGCGGATCGAGATCGCCATAGCTACTTAAATGCTCA                                                           >  SRR4302543.587215/1‑94 (MQ=60)
                                     ATCGTTACCCACCTGAGTCACATATTCAAAGCCGTTAAGGATCAGCAGCGGCATTTCCTGCGGATCGAGATCGCCATAGCTACTTAAATGCTCA                                                           <  SRR4302543.3549674/94‑1 (MQ=60)
                                     ATCGTTACCCACCTGAGTCACATATTCAAAGCCGTTAAGGATCAGCAGCGGCATTTCCTGCGGATCGAGATCGCCATAGCTACTTAAATGCTCA                                                           >  SRR4302543.2152401/1‑94 (MQ=60)
                                     ATCGTTACCCACCTGAGTCACATATTCAAAGCCGTTAAGGATCAGCAGCGGCATTTCCTGCGGATCGAGATCGCCATAGCTACTTAAATGCTCA                                                           >  SRR4302543.2190150/1‑94 (MQ=60)
                                      TCGTTACCCACCTGAGTCACATATTCAAAGCCGTTAAGGATCAGCAGCGGCATTTCCTGCGGATCGAGATCGCCATAGCTACTTAAATGCTCAA                                                          <  SRR4302543.2576625/94‑1 (MQ=60)
                                       CGTTACCCACCTGAGTCACATATTCAAAGCCGTTAAGGATCAGCAGCGGCATTTCCTGCGGATCGAGATCGCCATAGCTACTTAAATGCTCAAC                                                         >  SRR4302543.5076730/1‑94 (MQ=60)
                                       CGTTACCCACCTGAGTCACATATTCAAAGCCGTTAAGGATCAGCAGCGGCATTTCCTGCGGATCGAGATCGCCATAGCTACTTAAATGCTCAAC                                                         >  SRR4302543.2145817/1‑94 (MQ=60)
                                        GTTACCCACCTGAGTCACATATTCAAAGCCGTTAAGGATCAGCAGCGGCATTTCCTGCGGATCGAGATCGCCATAGCTACTTAAATGCTCAACA                                                        >  SRR4302543.6657984/1‑94 (MQ=60)
                                        GTTACCCACCTGAGTCACATATTCAAAGCCGTTAAGGATCAGCAGCGGCATTTCCTGCGGATCGAGATCGCCATAGCTACTTAAATGCTCAACA                                                        <  SRR4302543.3960005/94‑1 (MQ=60)
                                        GTTACCCACCTGAGTCACATATTCAAAGCCGTTAAGGATCAGCAGCGGCATTTCCTGCGGATCGAGATCGCCATAGCTACTTAAATGCTCAACA                                                        <  SRR4302543.3738776/94‑1 (MQ=60)
                                         TTACCCACCTGAGTCACATATTCAAAGCCGTTAAGGATCAGCAGCGGCATTTCCTGCGGATCGAGATCGCCATAGCTACTTAAATGCTCAACAG                                                       >  SRR4302543.3834405/1‑94 (MQ=60)
                                         TTACCCACCTGAGTCACATATTCAAAGCCGTTAAGGATCAGCAGCGGCATTTCCTGCGGATCGAGATCGCCATAGCTACTTAAATGCTCAACAG                                                       <  SRR4302543.1590244/94‑1 (MQ=60)
                                         TTACCCACCTGAGTCACATATTCAAAGCCGTTAAGGATCAGCAGCGGCATTTCCTGCGGATCGAGATCGCCATAGCTACTTAAATGCTCAACAG                                                       <  SRR4302543.6606578/94‑1 (MQ=60)
                                          TACCCACCTGAGTCACATATTTAAAGCCGGTAAGGGTCAGAAGTGGCATTTCCTGCGGGTCGAGATCGCCGTCGCTAGTTAAATGCTCAACATA                                                      >  SRR4302543.3219076/1‑94 (MQ=32)
                                          TACCCACCTGAGTCACATATTCAAAGCCGTTAAGGATCAGCAGCGGCATTTCCTGCGGATCGAGATCGCCATAGCTACTTAAATGCTCAACAGA                                                      <  SRR4302543.3224780/94‑1 (MQ=60)
                                          TACCCACCTGAGTCACATATTCAAAGCCGTTAAGGATCAGCAGCGGCATTTCCTGCGGATCGAGATCGCCATAGCTACTTAAATGCTCAACAGA                                                      <  SRR4302543.6482555/94‑1 (MQ=60)
                                          TACCCACCTGAGTCACATATTCAAAGCCGTTAAGGATCAGCAGCGGCATTTCCTGCGGATCGAGATCGCCATAGCTACTTAAATGCTCAACAGA                                                      >  SRR4302543.3219077/1‑94 (MQ=60)
                                           ACCCACCTGAGTCACATATTCAAAGCCGTTAAGGATCAGCAGCGGCATTTCCTGCGGATCGAGATCGCCATAGCTACTTAAATGCTCAACAGAG                                                     <  SRR4302543.1730667/94‑1 (MQ=60)
                                           ACCCACCTGAGTCACATATTCAAAGCCGTTAAGGATCAGCAGCGGCATTTCCTGCGGATCGAGATCGCCATAGCTACTTAAATGCTCAACAGAG                                                     <  SRR4302543.7708463/94‑1 (MQ=60)
                                           ACCCACCTGAGTCACATATTCAAAGCCGTTAAGGATCAGCAGCGGCATTTCCTGCGGATCGAGATCGCCATAGCTACTTAAATGCTCAACAGAG                                                     >  SRR4302543.1837811/1‑94 (MQ=60)
                                             CCCCCTGAGTCACATATTCAAAGCCGTTAAGGATCAGCAGCGGCATTTCCTGCGGATCGAGATCGCCATAGCTACTTAAATGCTCAACAGAGAT                                                   <  SRR4302543.5987382/94‑1 (MQ=60)
                                             CCACCTGAGTCACATATTCAAAGCCGTTAAGGATCAGCAGCGGCATTTCCTGCGGATCGAGATCGCCATAGCTACTTAAATGCTCAACAGAGAT                                                   <  SRR4302543.7542643/94‑1 (MQ=60)
                                             CCACCTGAGTCACATATTCAAAGCCGTTAAGGATCAGCAGCGGCATTTCCTGCGGATCGAGATCGCCATAGCTACTTAAATGCTCAACAGAGAT                                                   >  SRR4302543.4461569/1‑94 (MQ=60)
                                             CCACCTGAGTCACATATTCAAAGCCGTTAAGGATCAGCAGCGGCATTTCCTGCGGATCGAGATCGCCATAGCTACTTAAATGCTCAACAGAGAT                                                   <  SRR4302543.54623/94‑1 (MQ=60)
                                              CACCTGAGTCACATATTCAAAGCCGTTAAGGATCAGCAGCGGCATTTCCTGCGGATCGAGATCGCCATAGCTACTTAAATGCTCAACAGAGATG                                                  >  SRR4302543.1228879/1‑94 (MQ=60)
                                               ACCTGAGTCACATATTCAAAGCCGTTAAGGATCAGCAGCGGCATTTCCTGCGGATCGAGATCGCCATAGCTACTTAAATGCTCAACAGAGATGC                                                 >  SRR4302543.4703333/1‑94 (MQ=60)
                                                CCTGAGTCACATATTCAAAGCCGTTAAGGATCAGCAGCGGCATTTCCTGCGGATCGAGATCGCCATAGCTACTTAAATGCTCAACATAGATGCC                                                >  SRR4302543.3330417/1‑94 (MQ=60)
                                                CCTGAGTCACATATTCAAAGCCGTTAAGGATCAGCAGCGGCATTTCCTGCGGATCGAGATCGCCATAGCTACTTAAATGCTCAACAGAGATGCC                                                >  SRR4302543.552390/1‑94 (MQ=60)
                                                CCTGAGTCACATATTCAAAGCCGTTAAGGATCAGCAGCGGCATTTCCTGCGGATCGAGATCGCCATAGCTACTTAAATGCTCAACAGAGATGCC                                                <  SRR4302543.6623757/94‑1 (MQ=60)
                                                 CTGAGTCACATATTCAAAGCCGTTAAGGATCAGCAGCGGCATTTCCTGCGGATCGAGATCGCCATAGCTACTTAAATGCTCAACAGAGATGCCC                                               >  SRR4302543.4785288/1‑94 (MQ=60)
                                                 CTGAGTCACATATTCAAAGCCGTTAAGGATCAGCAGCGGCATTTCCTGCGGATCGAGATCGCCATAGCTACTTAAATGCTCAACAGAGATGCCC                                               >  SRR4302543.3916950/1‑94 (MQ=60)
                                                 CTGAGTCACATATTCAAAGCCGTTAAGGATCAGCAGCGGCATTTCCTGCGGATCGAGATCGCCATAGCTACTTAAATGCTCAACAGAGATGCCC                                               <  SRR4302543.6052525/94‑1 (MQ=60)
                                                 CTGAGTCACATATTCAAAGCCGTTAAGGATCAGCAGCGGCATTTCCTGCGGATCGAGATCGCCATAGCTACTTAAATGCTCAACAGAGATGCCC                                               <  SRR4302543.5505312/94‑1 (MQ=60)
                                                 CTGAGTCACATATTCAAAGCCGTTAAGGATCAGCAGCGGCATTTCCTGCGGATCGAGATCGCCATAGCTACTTAAATGCTCAACAGAGATGCCC                                               >  SRR4302543.154421/1‑94 (MQ=60)
                                                  TGAGTCACATATTCAAAGCCGTTAAGGATCAGCAGCGGCATTTCCTGCGGATCGAGATCGCCATAGCTACTTAAATGCTCAACAGAGATGCCCG                                              <  SRR4302543.1282071/94‑1 (MQ=60)
                                                  TGAGTCACATATTCAAAGCCGTTAAGGATCAGCAGCGGCATTTCCTGCGGATCGAGATCGCCATAGCTACTTAAATGCTCAACAGAGATGCCCG                                              <  SRR4302543.1685714/94‑1 (MQ=60)
                                                  TGAGTCACATATTCAAAGCCGTTAAGGATCAGCAGCGGCATTTCCTGCGGATCGAGATCGCCATAGCTACTTAAATGCTCAACAGAGATGCCCG                                              <  SRR4302543.7622660/94‑1 (MQ=60)
                                                   GAGTCACATATTCAAAGCCGTTAAGGATCAGCAGCGGCATTTCCTGCGGATCGAGATCGCCATCGCTACTTAAAGGCTCAACAGAGATGCGCGC                                             >  SRR4302543.6746099/1‑94 (MQ=60)
                                                   GAGTCACATATTCAAAGCCGTTAAGGATCAGCAGCGGCATTTCCTGCGGATCGAGATCGCCATAGCTACTTAAATGCTCAACAGAGATGCCCGC                                             >  SRR4302543.1999875/1‑94 (MQ=60)
                                                   GAGTCACATATTCAAAGCCGTTAAGGATCAGCAGCGGCATTTCCTGCGGATCGAGATCGCCATAGCTACTTAAATGCTCAACAGAGATGCCCGC                                             >  SRR4302543.4092602/1‑94 (MQ=60)
                                                     GTCACATATTCAAAGCCGTTAAGGATCAGCAGCGGCATTTCCTGCGGATCGAGATCGCCATAGCTACTTAAATGCTCAACAGAGATGCCCGCAA                                           >  SRR4302543.7128422/1‑94 (MQ=60)
                                                     GTCACATATTCAAAGCCGTTAAGGATCAGCAGCGGCATTTCCTGCGGATCGAGATCGCCATAGCTACTTAAATGCTCAACAGAGATGCCCGCAA                                           >  SRR4302543.3586611/1‑94 (MQ=60)
                                                     GTCACATATTCAAAGCCGTTAAGGATCAGCAGCGGCATTTCCTGCGGATCGAGATCGCCATAGCTACTTAAATGCTCAACAGAGATGCCCGCAA                                           >  SRR4302543.7128421/1‑94 (MQ=60)
                                                      TCACATATTCAAAGCCGTTAAGGATCAGCAGCGGCATTTCCTGCGGATCGAGATCGCCATAGCTACTTAAATGCTCAACAGAGATACCCGCAAA                                          <  SRR4302543.7123757/94‑1 (MQ=60)
                                                       CACATATTCAAAGCCGTTAAGGATCAGCAGCGGCATTTCCTGCGGATCGAGATCGCCATAGCTACTTAAATGCTCAACAGAGATGCCCGCAAct                                         >  SRR4302543.5583017/1‑92 (MQ=60)
                                                        ACATATTCAAAGCCGTTAAGGATCAGCAGCGGCATTTCCTGCGGATCGAGATCGCCATAGCTACTTAAATGCTCAACAGAGATGCCCGCAAAAT                                        <  SRR4302543.4628078/94‑1 (MQ=60)
                                                          ATATTCAAAGCCGTTAAGGATCAGCAGCGGCATTTCCTGCGGATCGAGATCGCCATAGCTACTTAAATGCTCAACAGAGATGCCCGCAAAATCC                                      >  SRR4302543.4774178/1‑94 (MQ=60)
                                                          ATATTCAAAGCCGTTAAGGATCAGCAGCGGCATTTCCTGCGGATCGAGATCGCCATAGCTACTTAAATGCTCAACAGAGATGCCCGCAAAATCC                                      <  SRR4302543.3051712/94‑1 (MQ=60)
                                                          ATATTCAAAGCCGTTAAGGATCAGCAGCGGCATTTCCTGCGGATCGAGATCGCCATAGCTACTTAAATGCTCAACAGAGATGCCCGCAAAATCC                                      <  SRR4302543.7261669/94‑1 (MQ=60)
                                                           TATTCAAAGCCGTTAAGGATCAGCAGCGGCATTTCCTGCGGATCGAGATCGCCATAGCTACTTAAATGCTCAACAGAGATGCCCGCAAAATCCG                                     >  SRR4302543.40022/1‑94 (MQ=60)
                                                              TCAAAGCCGTTAAGGATCAGCAGCGGCATTTCCTGCGGATCGAGATCGCCATAGCTACTTAAATGCTCAACAGAGATGCCCGCAAAATCCGGAT                                  <  SRR4302543.7325847/94‑1 (MQ=60)
                                                              TCAAAGCCGTTAAGGATCAGCAGCGGCATTTCCTGCGGATCGAGATCGCCATAGCTACTTAAATGCTCAACAGAGATGCCCGCAAAATCCGGAT                                  <  SRR4302543.3507310/94‑1 (MQ=60)
                                                              TCAAAGCCGTTAAGGATCAGCAGCGGCATTTCCTGCGGATCGAGATCGCCATAGCTACTTAAATGCTCAACAGAGATGCCCGCAAAATCCGGAT                                  <  SRR4302543.6769475/94‑1 (MQ=60)
                                                               CAAAGCCGTTAAGGATCAGCAGCGGCATTTCCTGCGGATCGAGATCGCCATAGCTACTTAAATGCTCAACAGAGATGCCCGCAAAATCCGGATG                                 <  SRR4302543.2610643/94‑1 (MQ=60)
                                                               CAAAGCCGTTAAGGATCAGCAGCGGCATTTCCTGCGGATCGAGATCGCCATAGCTACTTAAATGCTCAACAGAGATGCCCGCAAAATCCGGATG                                 <  SRR4302543.6877727/94‑1 (MQ=60)
                                                                AAAGCCGTTAAGGATCAGCAGCGGCATTTCCTGCGGATCGAGATCGCCATAGCTACTTAAATGCTCAACAGAGATGCCCGCAAAATCCGGATGG                                >  SRR4302543.3375783/1‑94 (MQ=60)
                                                                AAAGCCGTTAAGGATCAGCAGCGGCATTTCCTGCGGATCGAGATCGCCATAGCTACTTAAATGCTCAACAGAGATGCCCGCAAAATCCGGATGG                                >  SRR4302543.3953195/1‑94 (MQ=60)
                                                                  AGCCGTTAAGGATCAGCAGCGGCATTTCCTGCGGATCGAGATCGCCATAGCTACTTAAATGCTCAACAGAGATGCCCGCAAAATCCGGATGGAA                              >  SRR4302543.1105678/1‑94 (MQ=60)
                                                                  AGCCGTTAAGGATCAGCAGCGGCATTTCCTGCGGATCGAGATCGCCATAGCTACTTAAATGCTCAACAGAGATGCCCGCAAAATCCGGATGGAA                              <  SRR4302543.4726324/94‑1 (MQ=60)
                                                                  AGCCGTTAAGGATCAGCAGCGGCATTTCCTGCGGATCGAGATCGCCATAGCTACTTAAATGCTCAACAGAGATGCCCGCAAAATCCGGATGGAA                              >  SRR4302543.2705961/1‑94 (MQ=60)
                                                                   GCCGTTAAGGATCAGCAGCGGCATTTCCTGCGGATCGAGATCGCCATAGCTACTTAAATGCTCAACAGAGATGCCCGCAAAATCCGGATGGAAG                             <  SRR4302543.4684542/94‑1 (MQ=60)
                                                                   GCCGTTAAGGATCAGCAGCGGCATTTCCTGCGGATCGAGATCGCCATAGCTACTTAAATGCTCAACAGAGATGCCCGCAAAATCCGGATGGAAG                             <  SRR4302543.2520774/94‑1 (MQ=60)
                                                                    CCGTTAAGGATCAGCAGCGGCATTTCCTGCGGATCGAGATCGCCATAGCTACTTAAATGCTCAACAGAGATGCCCGCAAAATCCGGATGGAAGT                            <  SRR4302543.5239516/94‑1 (MQ=60)
                                                                    CCGTTAAGGATCAGCAGCGGCATTTCCTGCGGATCGAGATCGCCATAGCTACTTAAATGCTCAACAGAGATGCCCGCAAAATCCGGATGGAAGT                            >  SRR4302543.7591660/1‑94 (MQ=60)
                                                                    CCGTTAAGGATCAGCAGCGGCATTTCCTGCGGATCGAGATCGCCATAGCTACTTAAATGCTCAACAGAGATGCCCGCAAAATCCGGATGGAAGT                            >  SRR4302543.7591832/1‑94 (MQ=60)
                                                                     CGTTAAGGATCAGCAGCGGCATTTCCTGCGGATCGAGATCGCCATAGCTACTTAAATGCTCAACAGAGATGCCCGCAAAATCCGGATGGAAGTC                           >  SRR4302543.564802/1‑94 (MQ=60)
                                                                      GTTAAGGATCAGCAGCGTCATTTCCTGCGGATCGAGATCGCCATAGCTACTTAAATGCTCAACAGAGATGCCCGCAAAATCCGGATGGAAGTCG                          <  SRR4302543.4718729/94‑1 (MQ=60)
                                                                      GTTAAGGATCAGCAGCGGCATTTCCTGCGGATCGAGATCGCCATAGCTACTTAAATGCTCAACAGAGATGCCCGCAAAATCCGGATGGAAGTCG                          >  SRR4302543.3245867/1‑94 (MQ=60)
                                                                      GTTAAGGATCAGCAGCGGCATTTCCTGCGGATCGAGATCGCCATAGCTACTTAAATGCTCAACAGAGATGCCCGCAAAATCCGGATGGAAGTCG                          <  SRR4302543.3051799/94‑1 (MQ=60)
                                                                      GTTAAGGATCAGCAGCGGCATTTCCTGCGGATCGAGATCGCCATAGCTACTTAAATGCTCAACAGAGATGCCCGCAAAATCCGGATAGAAATCG                          >  SRR4302543.5320979/1‑94 (MQ=60)
                                                                          AGGATCAGCAGCGGCATTTCCTGCGGATCGAGATCGCCATAGCTACTTAAATGCTCAACAGAGATGCCCGCAAAATCCGGATGGAAGTCGAACG                      >  SRR4302543.6203824/1‑94 (MQ=60)
                                                                          AGGATCAGCAGCGGCATTTCCTGCGGATCGAGATCGCCATAGCTACTTAAATGCTCAACAGAGATGCCCGCAAAATCCGGATGGAAGTCGAACG                      <  SRR4302543.770049/94‑1 (MQ=60)
                                                                            GATCAGCAGCGGCATTTCCTGCGGATCGAGATCGCCATAGCTACTTAAATGCTCAACAGAGATGCCCGCAAAATCCGGATGGAAGTCGAACGCA                    <  SRR4302543.4653629/94‑1 (MQ=60)
                                                                            GATCAGCAGCGGCATTTCCTGCGGATCGAGATCGCCATAGCTACTTAAATGCTCAACAGAGATGCCCGCAAAATCCGGATGGAAGTCGAACGCA                    <  SRR4302543.4653630/94‑1 (MQ=60)
                                                                            GATCAGCAGCGGCATTTCCTGCGGATCGAGATCGCCATAGCTACTTAAATGCTCAACAGAGATGCCCGCAAAATCCGGATGGAAGTCGAACGCA                    <  SRR4302543.6995692/94‑1 (MQ=60)
                                                                             ATCAGCAGCGGCATTTCCTGCGGATCGAGATCGCCATAGCTACTTAAATGCTCAACAGAGATGCCCGCAAAATCCGGATGGAAGTCGAACGCAG                   <  SRR4302543.5031891/94‑1 (MQ=60)
                                                                             ATCAGCAGCGGCATTTCCTGCGGATCGAGATCGCCATAGCTACTTAAATGCTCAACAGAGATGCCCGCAAAATCCGGATGGAAGTCGAACGCAG                   <  SRR4302543.3122586/94‑1 (MQ=60)
                                                                             ATCAGCAGCGGCATTTCCTGCGGATCGAGATCGCCATAGCTACTTAAATGCTCAACAGAGATGCCCGCAAAATCCGGATGGAAGTCGAACGCAG                   <  SRR4302543.3026693/94‑1 (MQ=60)
                                                                             ATCAGCAGCGGCATTTCCTGCGGATCGAGATCGCCATAGCTACTTAAATGCTCAACAGAGATGCCCGCAAAATCCGGATGGAAGTCGAACGCAG                   <  SRR4302543.4938486/94‑1 (MQ=60)
                                                                             ATCAGCAGCGGCATTTCCTGCGGATCGAGATCGCCATAGCTACTTAAATGCTCAACAGAGATGCCCGCAAAATCCGGATGGAAGTCGAACGCAG                   <  SRR4302543.1333309/94‑1 (MQ=60)
                                                                             ATCAGCAGCGGCATTTCCTGCGGATCGAGATCGCCATAGCTACTTAAATGCTCAACAGAGATGCCCGCAAAATCCGGATGGAAGTCGAACGCAG                   >  SRR4302543.6994804/1‑94 (MQ=60)
                                                                             ATCAGCAGCGGCATTTCCTGCGGATCGAGATCGCCATAGCTACTTAAATGCTCAACAGAGATGCCCGCAAAATCCGGATGGAAGTCGAACGCAG                   <  SRR4302543.6719025/94‑1 (MQ=60)
                                                                               CAGCAGCGGCATTTCCTGCGGATCGAGATCGCCATAGCTACTTAAATGCTCAACAGAGATGCCCGCAAAATCCGGATGGAAGTCGAACGCAGCG                 >  SRR4302543.2752317/1‑94 (MQ=60)
                                                                                AGCAGCGGCATTTCCTGCGGATCGAGATCGCCATAGCTACTTAAATGCTCAACAGAGATGCCCGCAAAATCCGGATGGAAGTCGAACGCAGCGC                >  SRR4302543.2588496/1‑94 (MQ=60)
                                                                                AGCAGCGGCATTTCCTGCGGATCGAGATCGCCATAGCTACTTAAATGCTCAACAGAGATGCCCGCAAAATCCGGATGGAAGTCGAACGCAGCGC                >  SRR4302543.586680/1‑94 (MQ=60)
                                                                                 GCAGCGGCATTTCCTGCGGATCGAGATCGCCATAGCTACTTAAATGCTCAACAGAGATGCCCGCAAAATCCGGATGGAAGTCGAACGCAGCGCT               <  SRR4302543.201355/94‑1 (MQ=60)
                                                                                  CAGCGGCATTTCCTGCGGATCGAGATCGCCATAGCTACTTAAATGCTCAACAGAGATGCCCGCAAAATCCGGATGGAAGTCGAACGCAGCGCTG              <  SRR4302543.558907/94‑1 (MQ=60)
                                                                                  CAGCGGCATTTCCTGCGGATCGAGATCGCCATAGCTACTTAAATGCTCAACAGAGATGCCCGCAAAATCCGGATGGAAGTCGAACGCAGCGCTG              >  SRR4302543.6005316/1‑94 (MQ=60)
                                                                                   AGCGGCATTTCCTGCGGATCGAGATCGCCATAGCTACTTAAATGCTCAACAGAGATGCCCGCAAAATCCGGATGGAAGTCGAACGCAGCGCTGT             >  SRR4302543.7558568/1‑94 (MQ=60)
                                                                                   AGCGGCATTTCCTGCGGATCGAGATCGCCATAGCTACTTAAATGCTCAACAGAGATGCCCGCAAAATCCGGATGGAAGTCGAACGCAGCGCTGT             >  SRR4302543.649159/1‑94 (MQ=60)
                                                                                   AGCGGCATTTCCTGCGGATCGAGATCGCCATAGCTACTTAAATGCTCAACAGAGATGCCCGCAAAATCCGGATGGAAGTCGAACGCAGCGCTGT             >  SRR4302543.7786715/1‑94 (MQ=60)
                                                                                    GCGGCATTTCCTGCGGATCGAGATCGCCATAGCTACTTAAATGCTCAACAGAGATGCCCGCAAAATCCGGATGGAAGTCGAACGCAGCGCTGTT            <  SRR4302543.5692407/94‑1 (MQ=60)
                                                                                     CGGCATTTCCTGCGGATCGAGATCGCCATAGCTACTTAAATGCTCAACAGAGATGCCCGCAAAATCCGGATGGAAGTCGAACGCAGCGCTGTTT           <  SRR4302543.4625705/94‑1 (MQ=60)
                                                                                      GGCATTTCCTGCGGATCGAGATCGCCATAGCTACTTAAATGCTCAACAGAGATGCCCGCAAAATCCGGATGGAAGTCGAACGCAGCGCTGTTTC          >  SRR4302543.2024120/1‑94 (MQ=60)
                                                                                        CATTTCCTGCGGATCGAGATCGCCATAGCTACTTAAATGCTCAACAGAGATGCCCGCAAAATCCGGATGGAAGTCGAACGCAGCGCTGTTTGCT        >  SRR4302543.6820904/1‑94 (MQ=60)
                                                                                        CATTTCCTGCGGATCGAGATCGCCATAGCTACTTAAATGCTCAACAGAGATGCCCGCAAAATCCGGATGGAAGTCGAACGCAGCGCTGTTTCCT        <  SRR4302543.3301445/94‑1 (MQ=60)
                                                                                        CATTTCCTGCGGATCGAGATCGCCATAGCTACTTAAATGCTCAACAGAGATGCCCGCAAAATCCGGATGGAAGTCGAACGCAGCGCTGTTTCCT        >  SRR4302543.4602210/1‑94 (MQ=60)
                                                                                        CATTTCCTGCGGATCGAGATCGCCATAGCTACTTAAATGCTCAACAGAGATGCCCGCAAAATCCGGATGGAAGTCGAACGCAGCGCTGTTTCCT        >  SRR4302543.3788962/1‑94 (MQ=60)
                                                                                         ATTTCCTGCGGATCGAGATCGCCATAGCTACTTAAATGCTCAACAGAGATGCCCGCAAAATCCGGATGGAAGTCGAACGCAGCGCTGTTTCCTG       >  SRR4302543.5649544/1‑94 (MQ=60)
                                                                                         ATTTCCTGCGGATCGAGATCGCCATAGCTACTTAAATGCTCAACAGAGATGCCCGCAAAATCCGGATGGAAGTCGAACGCAGCGCTGTTTCCTG       >  SRR4302543.4975026/1‑94 (MQ=60)
                                                                                         ATTTCCTGCGGATCGAGATCGCCATAGCTACTTAAATGCTCAACAGAGATGCCCGCAAAATCCGGATGGAAGTCGAACGCAGCGCTGTTTCCTG       <  SRR4302543.7805908/94‑1 (MQ=60)
                                                                                         ATTTCCTGCGGATCGAGATCGCCATAGCTACTTAAATGCTCAACAGAGATGCCCGCAAAATCCGGATGGAAGTCGAACGCAGCGCTGTTTCCTG       <  SRR4302543.7727811/94‑1 (MQ=60)
                                                                                         ATTTCCTGCGGATCGAGATCGCCATAGCTACTTAAATGCTCAACAGAGATGCCCGCAAAATCCGGATGGAAGTCGAACGCAGCGCTGTTTCCTG       >  SRR4302543.4486871/1‑94 (MQ=60)
                                                                                         ATTTCCTGCGGATCGAGATCGCCATAGCTACTTAAATGCTCAACAGAGATGCCCGCAAAATCCGGATGGAAGTCGAACGCAGCGCTGTTTCCTG       >  SRR4302543.5908008/1‑94 (MQ=60)
                                                                                          TTTCCTGCGGATCGAGATCGCCATAGCTACTTAAATGCTCAACAGAGATGCCCGCAAAATCCGGATGGAAGTCGAACGCAGCGCTGTTTCCTGT      <  SRR4302543.6622912/94‑1 (MQ=60)
                                                                                          TTTCCTGCGGATCGAGATCGCCATAGCTACTTAAATGCTCAACAGAGATGCCCGCAAAATCCGGATGGAAGTCGAACGCAGCGCTGTTTCCTGT      >  SRR4302543.5386596/1‑94 (MQ=60)
                                                                                          TTC‑CTGCGGATCGAGATCGCCATAGCTACTTAAATGCTCAACAGAGATGCCCGCAAAATCCGGATGGAAGTCGAACGCAGCGCTGTTTCCTGTA     >  SRR4302543.330760/1‑94 (MQ=60)
                                                                                           TC‑CTGCGGATCGAGATCGCCATAGCTACTTAAATGCTCAACAGAGATGCCCGCAAAATCCGGATGGAAGTCGAACGCAGCGCTGTTTCCTGTAA    <  SRR4302543.6102901/94‑1 (MQ=60)
                                                                                            C‑CTGCGGATCGAGATCGCCATAGCTACTTAAATGCTCAACAGAGATGCCCGCAAAATCCGGATGGAAGTCGAACGCAGCGCTGTTTCCTGTAAC   >  SRR4302543.1863876/1‑94 (MQ=60)
                                                                                              CTGCGGATCGAGATCGCCATAGCTACTTAAATGCTCAACGGAGATGCCCGCAAAATCCGGATGGAAGTCGAACGCAGCGCTGTTTCCTGTAACC  <  SRR4302543.5685949/94‑1 (MQ=60)
                                                                                              |                                                                                             
GTTTGCTGGTATCTGCACGCAGCGGGATTGCATAAGGATCGTTACCCACCTGAGTCACATATTCAAAGCCGTTAAGGATCAGCAGCGGCATTT‑CTGCGGATCGAGATCGCCATAGCTACTTAAATGCTCAACAGAGATGCCCGCAAAATCCGGATGGAAGTCGAACGCAGCGCTGTTTCCTGTAACC  >  NC_000913/3115023‑3115209

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 9 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑