Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I1 R1
|
1696 |
279.3 |
15874187 |
97.8% |
15524954 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
3,125,293 |
T→C |
G248G (GGA→GGG) |
glcD ← |
glycolate oxidase subunit D |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 3,125,293 | 0 | T | C | 100.0%
| 915.5
/ NA
| 291 | G248G (GGA→GGG) | glcD | glycolate oxidase subunit D |
| Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (156/135); total (156/135) |
Only 100 of 303 total aligned reads displayed.
AAAATCTTCCGCCGCGCGGATCGACAGGTTATCCATCATCTCCAGCCCGCCGGGGATAATGCCATTGGCGATGATGTCACCAACCGCAAGTCCGGCTTTTTCTACCGAGTCAAAGCTGGCTAACAGAACCCGCGCCACGGGCGGCTTCGGCAGCAGTTTTACCGTCACTTCGGTGGTCAC > NC_000913/3125203‑3125382
|
aaaaTCTTCCGCCGCGCGGATCGACAGGTTATCCATCATCTCCAGCCCGCCGGGGATAATGCCATTGGCGATGATGTCACCAACCGCAAGccc < 2:6684462/93‑1 (MQ=255)
aaaaTCTTCCGCCGCGCGGATCGACAGCTTATCCATCATCTCCAGCCCGCCGGGGATAATGCCATTGGCGATGATGTCACCAACCGCAAGccc < 2:4849271/93‑1 (MQ=255)
aaTCTTCCGCCGCGCGGATCGACAGGTTATCCATCATCTCCAGCCCGCCGGGGATAATGCCATTGGCGATGATGTCACCAACCGCAAGCCCgg > 1:5299022/1‑93 (MQ=255)
aTCTTCCGCCGCGCGGATCGACAGGTTATCCATCATCTCCAGCCCGCCGGGGATAATGCCATTGGCGATGATGTCACCAACCGCAAGCCCGGc < 1:406284/93‑1 (MQ=255)
aTCTTCCGCCGCGCGGATCGACAGGTTATCCATCATCTCCAGCCCGCCGGGGATAATGCCATTGGCGATGATGTCACCAACCGCAAGCCCGGc > 1:3133328/1‑93 (MQ=255)
aTCTTCCGCCGCGCGGATCGACAGGTTATCCATCATCTCCAGCCCGCCGGGGATAATGCCATTGGCGATGATGTCACCAACCGCAAGCCCGGc < 2:5349862/93‑1 (MQ=255)
aTCTTCCGCCGCGCGGATCGACAGGTTATCCATCATCTCCAGCCCGCCGGGGATAATGCCATTGGCGATGATGTCACCAACCGCAAGCCCGGc < 1:5137865/93‑1 (MQ=255)
ttCCGCCGCGCGGATCGACAGGTTATCCATCATCTCCAGCCCGCCGGGGATAATGCCATTGGCGATGATGTCACCAACCGCAAGCCCGGCttt > 1:3313418/1‑93 (MQ=255)
ttCCGCCGCGCGGATCGACAGGTTATCCATCATCTCCAGCCCGCCGGGGATAATGCCATTGGCGATGATGTCACCAACCGCAAGCCCGGCttt > 1:1000230/1‑93 (MQ=255)
cgccgcGCGGATCGACAGGTTATCCATCATCTCCAGCCCGCCGGGGATAATGCCATTGGCGATGATGTCACCAACCGCAAGCCCGGCTTTTTc < 1:1571559/93‑1 (MQ=255)
gccgcGCGGATCGACAAGTTATCCATCATCTCCAGCCCGCCGGGGATAATGCCATTGGCGATGATGTCACCAACCGCAAGCCCGGCTTTTTCt < 1:5548471/93‑1 (MQ=255)
ccgcGCGGATCGACAGGTTATCCATCATCTCCAGCCCGCCGGGGATAATGCCATTGGCGATGATGTCACCAACCGCAAGCCCGGCTTTTTCTa < 2:2445423/93‑1 (MQ=255)
cgcgcgGATCGACAGGTTATCCATCATCTCCAGCCCGCCGGGGATAATGCCATTGGCGATGATGTCACCAACCGCAAGCCCGGCTTTTTCTAc < 2:3622428/93‑1 (MQ=255)
cgcgcgGATCGACAGGTTATCCATCATCTCCAGCCCGCCGGGGATAATGCCATTGGCGATGATGTCACCAACCGCAAGCCCGGCTTTTTCTAc < 2:1867177/93‑1 (MQ=255)
cgcgGATCGACAGGTTATCCATCATCTCCAGCCCGCCGGGGATAATGCCATTGGCGATGATGTCACCAACCGCAAGCCCGGCTTTTTCTACCg < 1:7546902/93‑1 (MQ=255)
gcgGATCGACAGGTTATCCATCATCTCCAGCCCGCCGGGGATAATGCCATTGGCGATGATGTCACCAACCGCAAGCCCGGCTTTTTCTACCGa < 2:589867/93‑1 (MQ=255)
gcgGATCGACAGGTTATCCATCATCTCCAGCCCGCCGGGGATAATGCCATTGGCGATGATGTCACCAACCGCAAGCCCGGCTTTTTCTACCGa > 1:7103184/1‑93 (MQ=255)
cgGATCGACAGGTTATCCATCATCTCCATCCCGGCGGGGATAATGCCATTGGCGATGATGTCACCATCCGCAAGCCCGTCTTTTTCTACCGAg < 2:4071675/93‑1 (MQ=255)
cgGATCGACAGGTTATCCATCATCTCCAGCCCGCCGGGGATAATGCCATTGGCGATGATGTCACCAACCGCAAGCCCGGCTTTTTCTACCGAg < 2:6076279/93‑1 (MQ=255)
ggATCGACAGGTTATCCATCATCTCCATCCCGCCGGGGATAATGCCATTGGCGATGATGTCACCAACCGCAAGCCCGGCTTTTTCTACCGAGt > 1:6546834/1‑93 (MQ=255)
ggATCGACAGGTTATCCATCATCTCCAGCCCGCCGGGGATAATGCCATTGGCGATGATGTCACCAACCGCAAGCCCGGCTTTTTCTACCGAGt < 2:7546255/93‑1 (MQ=255)
tCGACAGGTTATCCATCATCTCCAGCCCGCCGGGGATAATGCCATTGGCGATGATGTCACCAACCGCAAGCCCGGCTTTTTCTACCGAGTCaa < 2:2525894/93‑1 (MQ=255)
cGACAGGTTATCCATCATCTCCAGCCCGCCGGGGATAATGCCATTGGCGATGATGTCACCAACCGCAAGCCCGGCTTTTTCTACCGAGTCaaa < 1:7230041/93‑1 (MQ=255)
aCAGGTTATCCATCATCTCCAGCCCGCCGGGGATAATGCCATTGGCGATGATGTCACCAACCGCAAGCCCGGCTTTTTCTACCGAGTCAAAGc > 1:765380/1‑93 (MQ=255)
aCAGGTTATCCATCATCTCCAGCCCGCCGGGGATAATGCCATTGGCGATGATGTCACCAACCGCAAGCCCGGCTTTTTCTACCGAGTCAAAGc > 1:1261075/1‑93 (MQ=255)
cAGGTTATCCATCATCTCCAGCCCGCCGGGGATAATGCCATTGGCGATGATGTCACCAACCGCAAGCCCGGCTTTTTCTACCGAGTCAAAGCt > 1:4700301/1‑93 (MQ=255)
cAGGTTATCCATCATCTCCAGCCCGCCGGGGATAATGCCATTGGCGATGATGTCACCAACCGCAAGCCCGGCTTTTTCTACCGAGTCAAAGCt > 2:529825/1‑93 (MQ=255)
aGGTTATCCATCATCTCCAGCCCGCCGGGGATAATGCCATTGGCGATGATGTCACCAACCGCAAGCCCGGCTTTTTCTACCGAGTCAAAGCTg > 1:7864620/1‑93 (MQ=255)
ggTTATCCATCATCTCCAGCCCGCCGGGGATAATGCCATTGGCGATGATGTCACCAACCGCAAGCCCGGCTTTTTCTACCGAGTCAAAGCTgg > 2:3962341/1‑93 (MQ=255)
ggTTATCCATCATCTCCAGCCCGCCGGGGATAATGCCATTGGCGATGATGTCACCAACCGCAAGCCCGGCTTTTTCTACCGAGTCAAAGCTgg > 2:325060/1‑93 (MQ=255)
gTTATCCATCATCTCCAGCCCGCCGGGGATAATGCCATTTGCGATGATGTCACCAACCGCAAGCCCGGCTTTTTCTACCGAGTCAAAGCTGGc > 2:6265497/1‑93 (MQ=255)
ttATCCATCATCTCCAGCCCGCCGGGGATAATGCCATTGGCGATGATGTCACCAACCGCAAGCCCGGCTTTTTCTACCGAGTCAAAGCTGGCt > 1:2716413/1‑93 (MQ=255)
tCCATCATCTCCAGCCCGCCGGGGATAATGCCATTGGCGATGATGTCACCAACCGCAAGCCCGGCTTTTTCTACCGAGTCAAAGCTGGCTAAc < 1:3770219/93‑1 (MQ=255)
tCCATCATCTCCAGCCCGCCGGGGATAATGCCATTGGCGATGATGTCACCAACCGCAAGCCCGGCTTTTTCTACCGAGTCAAAGCTGGCTAAc > 1:7422193/1‑93 (MQ=255)
ccATCATCTCCAGCCCGCCGGGGATAATGCCATTGGCGATGATGTCACCAACCGCAAGCCCGGCTTTTTCTACCGAGTCAAAGCTGGCTAACa < 1:1020768/93‑1 (MQ=255)
catcatCTCCAGCCCGCCGGGGATAATGCCATTGGCGATGATGTCACCAACCGCAAGCCCGGCTTTTTCTACCGAGTCAAAGCTGGCTAACAg > 2:3323460/1‑93 (MQ=255)
catcatCTCCAGCCCGCCGGGGATAATGCCATTGGCGATGATGTCACCAACCGCAAGCCCGGCTTTTTCTACCGAGTCAAAGCTGGCTAACAg > 2:5974519/1‑93 (MQ=255)
atcatcTCCAGCCCGCCGGGGATAATGCCATTGGCGATGATGTCACCAACCGCAAGCCCGGCTTTTTCTACCGAGTCAAAGCTGGCTAACAGa > 1:295952/1‑93 (MQ=255)
tcatcTCCAGCCCGCCGGGGATAATGCCATTGGCGATGATGTCACCAACCGCAAGCCCGGCTTTTTCTACCGAGTCAAAGCTGGCTAACAGaa < 1:2442860/93‑1 (MQ=255)
tcatcTCCAGCCCGCCGGGGATAATGCCATTGGCGATGATGTCACCAACCGCAAGCCCGGCTTTTTCTACCGAGTCAAAGCTGGCTAACAGaa < 1:6994876/93‑1 (MQ=255)
tcatcTCCAGCCCGCCGGGGATAATGCCATTGGCGATGATGTCACCAACCGCAAGCCCGGCTTTTTCTACCGAGTCAAAGCTGGCTAACAGaa > 2:619810/1‑93 (MQ=255)
catcTCCAGCCCGCCGGGGATAATGCCATTGGCGATGATGTCACCAACCGCAAGCCCGGCTTTTTCTACCGAGTCAAAGCTGGCTTACAGAAc < 2:7008442/93‑1 (MQ=255)
catcTCCAGCCCGCCGGGGATAATGCCATTGGCGATGATGTCACCAACCGCAAGCCCGGCTTTTTCTACCAAGTCAAAGATGGCTAACAGAAc > 2:7124292/1‑93 (MQ=255)
atcTCCAGCCCGCCGGGGATAATGCCATTGGCGATGATGTCACCAACCGCAAGCCCGGCTTTTTCTACCGAGTCAAAGCTGGCTAACAGAAcc < 1:1152291/93‑1 (MQ=255)
tctcCAGCCCGCCGGGGATAATGCCATTGGCGATGATGTCACCAACCGCAAGCCCGGCTTTTTCTACCGAGTCAAAGCTGGCTAACAGAAccc > 2:4178897/1‑93 (MQ=255)
tctcCAGCCCGCCGGGGATAATGCCATTGGCGATGATGTCACCAACCGCAAGCCCGGCTTTTTCTACCGAGTCAAAGCTGGCTAACAGAAccc > 1:5499547/1‑93 (MQ=255)
tctcCAGCCCGCCGGGGATAATGCCATTGGCGATGATGTCACCAACCGCAAGCCCGGCTTTTTCTACCGAGTCAAAGCTGGCTAACAGAAccc > 2:1849166/1‑93 (MQ=255)
tctcCAGCCCGCCGGGGATAATGCCATTGGCGATGATGTCACCAACCGCAAGCCCGGCTTTTTCTACCGAGTCAAAGCTGGCTAACAGAAccc > 1:5814537/1‑93 (MQ=255)
ctcCAGCCCGCCGGGGATAATGCCATTGGCGATGATGTCACCAACCGCAAGCCCGGCTTTTTCTACCGAGTCAAAGCTGGCTAACAGAACCcg < 2:5765194/93‑1 (MQ=255)
tcCAGCCCGCCGGGGATAATGCCATTGGCGATGCTGTCACCAACCGCAAGCCCGGCTTTTTCTACAGAGTCAACGCTGGCTACCAGAACCcgc > 1:7452231/1‑93 (MQ=255)
tcCAGCCCGCCGGGGATAATGCCATTGGCGATGATGTCACCAACCGCAAGCCCGGCTTTTTCTACCGAGTCAAAGCTGGCTAACAGAACCcgc < 1:3610728/93‑1 (MQ=255)
cAGCCCGCCGGGGATAATGCCATTGGCGATGATGTCACCAACCGCAAGCCCGGCTTTTTCTACCGAGTCAAAGCTGGCTAACAGAACCCgcgc > 1:6253965/1‑93 (MQ=255)
gCCCGCCGGGGATAATGCCATTGGCGATGATGTCACCAACCGCAAGCCCGGCTTTTTCTACCGAGTCAAAGCTGGCTAACAGAACCCGCGCCa > 2:2637279/1‑93 (MQ=255)
cgccgGGGATAATGCCATTGGCGATGATGTCACCAACCGCAAGCCCGGCTTTTTCTACCGAGTCAAAGCTGGCTAACAGAACCCGCGCCACgg < 1:2633805/93‑1 (MQ=255)
cgccgGGGATAATGCCATTGGCGATGATGTCACCAACCGCAAGCCCGGCTTTTTCTACCGAGTCAAAGCTGGCTAACAGAACCCGCGCCACgg < 2:1485866/93‑1 (MQ=255)
ccgGGGATAATGCCATTGGCGATGATGTCACCAACCGCAAGCCCGGCTTTTTCTACCGAGTCAAAGCTGGCTAACAGAACCCGCGCCACGggc > 1:6836160/1‑93 (MQ=255)
ccgGGGATAATGCCATTGGCGATGATGTCACCAACCGCAAGCCCGGCTTTTTCTACCGAGTCAAAGCTGGCTAACAGAACCCGCGCCACGggc < 1:6739516/93‑1 (MQ=255)
ggggATAATGCCATTGGCGATGATGTCACCAACCGCAAGCCCGGCTTTTTCTACCGAGTCAAAGCTGGCTAACAGAACCCGCGCCACGggcgg > 2:5011468/1‑93 (MQ=255)
ggggATAATGCCATTGGCGATGATGTCACCAACCGCAAGCCCGGCTTTTTCTACCGAGTCAAAGCTGGCTAACAGAACCCGCGCCACGggcgg > 1:960366/1‑93 (MQ=255)
ggATAATGCCATTGGCGATGATGTCACCAACCGCAAGCCCGGCTTTTTCTACCGAGTCAAAGCTGGCTAACAGAACCCGCGCCACGGGCGGCt < 2:519956/93‑1 (MQ=255)
gATAATGCCATTGGCGATGATGTCACCAACCGCAAGCCCGGCTTTTTCTACCGAGTCAAAGCTGGCTAACAGAACCCGCGCCACGGGCGGCtt < 2:7818972/93‑1 (MQ=255)
aTAATGCCATTGGCGATGATGTCACCAACCGCAAGCCCGGCTTTTTCTACCGAGTCAAAGCTGGCTAACAGAACCCGCGCCACGGGCGGCTTc > 2:7345781/1‑93 (MQ=255)
tAATGCCATTGGCGATGATGTCACCAACCGCAAGCCCGGCTTTTTCTACCGAGTCAAAGCTGGCTAACAGAACCCGCGCCACGGGCGGCTTCg > 2:1004673/1‑93 (MQ=255)
tAATGCCATTGGCGATGATGTCACCAACCGCAAGCCCGGCTTTTTCTACCGAGTCAAAGCTGGCTAACAGAACCCGCGCCACGGGCGGCTTCg > 1:4426224/1‑93 (MQ=255)
aTGCCATTGGCGATGATGTCACCAACCGCAAGCCCGGCTTTTTCTACCGAGTCAAAGCTGGCTAACAGAACCCGCGCCACGGGCGGCTTCGgc < 2:772412/93‑1 (MQ=255)
aTGCCATTGGCGATGATGTCACCAACCGCAAGCCCGGCTTTTTCTACCGAGTCAAAGCTGGCTAACAGAACCCGCGCCACGGGCGGCTTCGgc < 2:1216663/93‑1 (MQ=255)
tGCCATTGGCGATGATGTCACCAACCGCAAGCCCGGCTTTTTCTACCGAGTCAAAGCTGGCTAACAGAACCCGCGCCACGGGCGGCTTCGgca > 2:3036550/1‑93 (MQ=255)
tGCCATTGGCGATGATGTCACCAACCGCAAGCCCGGCTTTTTCTACCGAGTCAAAGCTGGCTAACAGAACCCGCGCCACGGGCGGCTTCGgca > 2:5054582/1‑93 (MQ=255)
tGCCATTGGCGATGATGTCACCAACCGCAAGCCCGGCTTTTTCTACCGAGTCAAAGCTGGCTAACAGAACCCGCGCCACGGGCGGCTTCGgca > 1:6447510/1‑93 (MQ=255)
tccATTGGCTATGATGTCACCAACCGCAAGCCCTGCTTGTTCTACCGAGTCAAAGCTGGCTAACAGAACCCGCGCCACGGGCGGCTTCGgcag < 2:5525468/92‑1 (MQ=255)
aTTGGCGATGATGTCACCAACCGCAAGCCCGGCTTTTTCTACCGAGTCAAAGCTGGCTAACAGAACCCGCGCCACGGGCGGCTTCGGcagcag > 1:259042/1‑93 (MQ=255)
ttGGCGATGATGTCACCAACCGCAAGCCCGGCTTTTTCTACCGAGTCAAAGCTGGCTAACAGAACCCGCGCCACGGGCGGCTTCGGcagcagc > 1:479374/1‑92 (MQ=255)
ttGGCGATGATGTCACCAACCGCAAGCCCGGCTTTTTCTACCGAGTCAAAGCTGGCTAACAGAACCCGCGCCACGGGCGGCTTCGGcagcagc > 1:4985414/1‑92 (MQ=255)
ttGGCGATGATGTCACCAACCGCAAGCCCGGCTTTTTCTACCGAGTCAAAGCTGGCTAACAGAACCCGCGCCACGGGCGGCTTCGGcagcagc < 1:4895953/93‑2 (MQ=255)
tGGCGATGATGTCACCAACCGCAAGCCCGGCTTTTTCTACCGAGTCAAAGCTGGCTAACAGAACCCGCGCCACGGGCGGCTTCGGcagcagct > 2:455498/1‑91 (MQ=255)
gCGATGATGTCACCAACCGCAAGCCCGGCTTTTTCTACCGAGTCAAAGCTGGCTAACAGAACCCGCGCCACGGGCGGCTTCGGCAGCAGcttt > 2:5661728/1‑93 (MQ=255)
cGATGATGTCACCAACCGCAAGCCCGGCTTTTTCTACCGAGTCAAAGCTGGCTAACAGAACCCGCGCCACGGGCGGCTTCGGCAGCAGCTTTa < 1:2516404/93‑1 (MQ=255)
cGATGATGTCACCAACCGCAAGCCCGGCTTTTTCTACCGAGTCAAAGCTGGCTAACAGAACCCGCGCCACGGGCGGCTTCGGCAGCAGCTTTa < 2:3806679/93‑1 (MQ=255)
cGATGATGTCACCAACCGCAAGCCCGGCTTTTTCTACCGAGTCAAAGCTGGCTAACAGAACCCGCGCCACGGGCGGCTTCGGCAGCAGCTTTa > 2:235863/1‑93 (MQ=255)
gatgatGTCACCAACCGCAAGCCCGGCTTTTTCTACCGAGTCAAAGCTGGCTAACAGAACCCGCGCCACGGGCGGCTTCGGCAGCAGCTTTAc > 2:4348264/1‑93 (MQ=255)
gatgatGTCACCAACCGCAAGCCCGGCTTTTTCTACCGAGTCAAAGCTGGCTAACAGAACCCGCGCCACGGGCGGCTTCGGCAGCAGCTTTAc > 2:6528894/1‑93 (MQ=255)
atgatgTCACCAACCGCAAGCCCGGCTTTTTCTACCGAGTCAAAGCTGGCTAACAGAACCCGCGCCACGGGCGGCTTCGGCAGCAGCTTTAcc > 1:6811585/1‑93 (MQ=255)
atgatgTCACCAACCGCAAGCCCGGCTTTTTCTACCGAGTCAAAGCTGGCTAACAGAACCCGCGCCACGGGCGGCTTCGGCAGCAGCTTTAcc > 1:89841/1‑93 (MQ=255)
tgatgTCACCCACCGCAAGCCCGGCTTTTTCTACCGAGTCAAAGCTGGCTAACAGAACCCGCGCCACGGGCGGCTTCGGCAGCAGCTTTACCg < 2:1962542/93‑1 (MQ=255)
gatgTCACCAACCGCAAGCCCGGCTTTTTCTACCGAGTCAAAGCTGGCTAACAGAACCCGCGCCACGGGCGGCTTCGGCAGCAGCTTTACCGt > 1:1893644/1‑93 (MQ=255)
atgTCACCAACCGCAAGCCCGGCTTTTTCTACCGAGTCAAAGCTGGCTAACAGAACCCGCGCCACGGGCGGCTTCGGCAGCAGCTTTACCGTc < 2:167896/93‑1 (MQ=255)
tgTCACCAACCGCAAGCCCGGCTTTTTCTACCGAGTCAAAGCTGGCTAACAGAACCCGCGCCACGGGCGGCTTCGGCAGCAGCTTTACCGTCa > 1:1513089/1‑93 (MQ=255)
tCACCAACCGCAAGCCCGGCTTTTTCTACCGAGTCAAAGCTGGCTAACAGAACCCGCGCCACGGGCGGCTTCGGCAGCAGCTTTACCGTCACt > 1:5777454/1‑93 (MQ=255)
tCACCAACCGCAAGCCCGGCTTTTTCTACCGAGTCAAAGCTGGCTAACAGAACCCGCGCCACGGGCGGCTTCGGCAGCAGCTTTACCGTCACt < 1:4288628/93‑1 (MQ=255)
aCCAACCGCAAGCCCGGCTTTTTCTACCGAGTCAAAGCTGGCTAACAGAACCCGCGCCACGGGCGGCTTCGGCAGCAGCTTTACCGTCACTTc > 1:7366652/1‑93 (MQ=255)
aCCAACCGCAAGCCCGGCTTTTTCTACCGAGTCAAAGCTGGCTAACAGAACCCGCGCCACGGGCGGCTTCGGCAGCAGCTTTACCGTCACTTc < 2:2919889/93‑1 (MQ=255)
aCCAACCGCAAGCCCGGCTTTTTCTACCGAGTCAAAGCTGGCTAACAGAACCCGCGCCACGGGCGGCTTAGGCAGCAGCTTTACCGTCACTTc > 2:4290638/1‑93 (MQ=255)
ccAACCGCAAGCCCGGCTTTTTCTACCGAGTCAAAGCTGGCTAACAGAACCCGCGCCACGGGCGGCTTCGGCAGCAGCTTTACCGTCACTTCg > 2:2731967/1‑93 (MQ=255)
aaCCGCAAGCCCGGCTTTTTCTACCGAGTCAAAGCTGGCTAACAGAACCCGCGCCACGGGCGGCTTCGGCAGCAGCTTTACCGTCACTTCggt > 1:2065629/1‑93 (MQ=255)
ccGCAAGCCCGGCTTTTTCTACCGAGTCAAAGCTGGCTAACAGAACCCGCGCCACGGGCGGCTTCGGCAGCAGCTTTACCGTCACTTCggtgg > 1:177380/1‑93 (MQ=255)
gCAAGCCCGGCTTTTTCTACCGAGTCAAAGCTGGCTAACAGAACCCGCGCCACGGGCGGCTTCGGCAGCAGCTTTACCGTCACTTCGGTGGTc > 1:6027554/1‑93 (MQ=255)
gCAAGCCCGGCTTTTTCTACCGAGTCAAAGCTGGCTAACAGAACCCGCGCCACGGGCGGCTTCGGCAGCAGCTTTACCGTCACTTCGGTGGTc > 2:3904224/1‑93 (MQ=255)
cAAGCCCGGCTTTTTCTACCGAGTCAAAGCTGGCTAACAGAACCCGCGCCACGGGCGGCTTCGGCAGCAGCTTTACCGTCACTTCGGTGGTCa < 1:3588683/93‑1 (MQ=255)
aaGCCCGGCTTTTTCTACCGAGTCAAAGCTGGCTAACAGAACCCGCGCCACGGGCGGCTTCGGCAGCAGCTTTACCGTCACTTCGGTGGTCAc < 2:3450452/93‑1 (MQ=255)
aaGCCCGGCTTTTTCTACCGAGTCAAAGCTGGCTAACAGAACCCGCGCCACGGGCGGCTTCGGCAGCAGCTTTACCGTCACTTCGGTGGTCAc < 2:895118/93‑1 (MQ=255)
|
AAAATCTTCCGCCGCGCGGATCGACAGGTTATCCATCATCTCCAGCCCGCCGGGGATAATGCCATTGGCGATGATGTCACCAACCGCAAGTCCGGCTTTTTCTACCGAGTCAAAGCTGGCTAACAGAACCCGCGCCACGGGCGGCTTCGGCAGCAGTTTTACCGTCACTTCGGTGGTCAC > NC_000913/3125203‑3125382
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
AATAAAATCTTCCGCCGCGCGGATCGACAGGTTATCCATCATCTCCAGCCCGCCGGGGATAATGCCATTGGCGATGATGTCACCAACCGCAAGTCCGGCTTTTTCTACCGAGTCAAAGCTGGCTAACAGAACCCGCGCCACGGGCGGCTTCGGCAGCAGTTTTACCGTCACTTCGGTGGTCACGCCG > NC_000913/3125200‑3125386
|
AATAAAATCTTCCGCCGCGCGGATCGACAGGTTATCCATCATCTCCAGCCCGCCGGGGATAATGCCATTGGCGATGATGTCACCAACCGCAAGC < SRR4302543.5764611/94‑1 (MQ=60)
ATAAAATCTTCCGCCGCGCGGATCGACAGGTTATCCATCATCTCCAGCCCGCCGGGGATACTGCCATTGGCGATGATGTCACGAACCGCAAGCC > SRR4302543.4066379/1‑94 (MQ=60)
ATAAAATCTTCCGCCGCGCGGATCGACAGGTTATCCATCATCTCCAGCCCGCCGGGGATAATGCCATTGGCGATGATGTCACCAACCGCAAGCC < SRR4302543.3166236/94‑1 (MQ=60)
ATAAAATCTTCCGCCGCGCGGATCGACAGGTTATCCATCATCTCCAGCCCGCCGGGGATAATGCCATTGGCGATGATGTCACCAACCGCAAGCC > SRR4302543.2842369/1‑94 (MQ=60)
AAATCTTCCGCCGCGCGGATCGACAGGTTATCCATCATCTCCAGCCCGCCGGGGATAATGCCATTGGCGATGATGTCACCAACCGCAAGCCCGG > SRR4302543.5346854/1‑94 (MQ=60)
AAATCTTCCGCCGCGCGGATCGACAGGTTATCCATCATCTCCAGCCCGCCGGGGATAATGCCATTGGCGATGATGTCACCAACCGCAAGCCCGG > SRR4302543.6129890/1‑94 (MQ=60)
AATCTTCCGCCGCGCGGATCGACAGGTTATCCATCATCTCCAGCCCGCCGGGGATAATGCCATTGGCGATGATGTCACCAACCGCAAGCCCGGC > SRR4302543.3161509/1‑94 (MQ=60)
ATCTTCCGCCGCGCGGATCGACAGGTTATCCATCATCTCCAGCCCGCCGGGGATAATGCCATTGGCGATGATGTCACCAACCGCAAGCCCGGCT < SRR4302543.410031/94‑1 (MQ=60)
ATCTTCCGCCGCGCGGATCGACAGGTTATCCATCATCTCCAGCCCGCCGGGGATAATGCCATTGGCGATGATGTCACCAACCGCAAGCCCGGCT < SRR4302543.5184309/94‑1 (MQ=60)
ATCTTCCGCCGCGCGGATCGACAGGTTATCCATCATCTCCAGCCCGCCGGGGATAATGCCATTGGCGATGATGTCACCAACCGCAAGCCCGGCT < SRR4302543.5563170/94‑1 (MQ=60)
CTTCCGCCGCGCGGATCGACAGGTTATCCATCATCTCCAGCCCGCCGGGGATAATGCCATTGGCGATGATGTCACCAACCGCAAGCCCGGCTTT > SRR4302543.1009065/1‑94 (MQ=60)
CTTCCGCCGCGCGGATCGACAGGTTATCCATCATCTCCAGCCCGCCGGGGATAATGCCATTGGCGATGATGTCACCAACCGCAAGCCCGGCTTT > SRR4302543.3343328/1‑94 (MQ=60)
CTTCCGCCGCGCGGATCGACAGGTTATCCATCATCTCCAGCCCGCCGGGGATAATGCCATTGGCGATGATGTCACCAACCGCAAGCCCGGCTTT < SRR4302543.5916052/94‑1 (MQ=60)
TTCCGCCGCGCGGATCGACAGGTTATCCATCATCTCCAGCCCGCCGGGGATAATGCCATTGGCGATGATGTCACCAACCGCAAGCCCGGCTTTT < SRR4302543.7711437/94‑1 (MQ=60)
TCCGCCGCGCGGATCGACAGGTTATCCATCATCTCCAGCCCGCCGGGGATAATGCCATTGGCGATGATGTCACCAACCGCAAGCCCGGCTTTTT < SRR4302543.7779408/94‑1 (MQ=60)
TCCGCCGCGCGGATCGACAGGTTATCCATCATCTCCAGCCCGCCGGGGATAATGCCATTGGCGATGATGTCACCAACCGCAAGCCCGGCTTTTT < SRR4302543.478164/94‑1 (MQ=60)
TCCGCCGCGCGGATCGACAGGTTATCCATCATCTCCAGCCCGCCGGGGATAATGCCATTGGCGATGATGTCACCAACCGCAAGCCCGGCTTTTT > SRR4302543.1937784/1‑94 (MQ=60)
CGCCGCGCGGATCGACAGGTTATCCATCATCTCCAGCCCGCCGGGGATAATGCCATTGGCGATGATGTCACCAACCGCAAGCCCGGCTTTTTCT < SRR4302543.1585585/94‑1 (MQ=60)
CGCCGCGCGGATCGACAGGTTATCCATCATCTCCAGCCCGCCGGGGATAATGCCATTGGCGATGATGTCACCAACCGCAAGCCCGGCTTTTTCT < SRR4302543.7717022/94‑1 (MQ=60)
CGCCGCGCGGATCGACAGGTTATCCATCATCTCCAGCCCGCCGGGGATAATGCCATTGGCGATGATGTCACCAACCGCAAGCCCGGCTTTTTCT < SRR4302543.2522723/94‑1 (MQ=60)
GCCGCGCGGATCGACAAGTTATCCATCATCTCCAGCCCGCCGGGGATAATGCCATTGGCGATGATGTCACCAACCGCAAGCCCGGCTTTTTCTA < SRR4302543.5598931/94‑1 (MQ=60)
CCGCGCGGATCGACAGGTTATCCATCATCTCCAGCCCGCCGGGGATAATGCCATTGGCGATGATGTCACCAACCGCAAGCCCGGCTTTTTCTAC > SRR4302543.5235765/1‑94 (MQ=60)
CGCGCGGATCGACAGGTTATCCATCATCTCCAGCCCGCCGGGGATAATGCCATTGGCGATGATGTCACCAACCGCAAGCCCGGCTTTTTCTACC > SRR4302543.3688595/1‑94 (MQ=60)
CGCGGATCGACAGGTTATCCATCATCTCCAGCCCGCCGGGGATAATGCCATTGGCGATGATGTCACCAACCGCAAGCCCGGCTTTTTCTACCGA > SRR4302543.7172177/1‑94 (MQ=60)
CGCGGATCGACAGGTTATCCATCATCTCCAGCCCGCCGGGGATAATGCCATTGGCGATGATGTCACCAACCGCAAGCCCGGCTTTTTCTACCGA < SRR4302543.3838824/94‑1 (MQ=60)
CGCGGATCGACAGGTTATCCATCATCTCCAGCCCGCCGGGGATAATGCCATTGGCGATGATGTCACCAACCGCAAGCCCGGCTTTTTCTACCGA < SRR4302543.7618799/94‑1 (MQ=60)
GCGGATCGACAGGTTATCCATCATCTCCAGCCCGCCGGGGATAATGCCATTGGCGATGATGTCACCAACCGCAAGCCCGGCTTTTTCTACCGAG < SRR4302543.3032174/94‑1 (MQ=60)
GCGGATCGACAGGTTATCCATCACCCCCAGCCCGCCGGGGATAATGCCATTGGCGATGATGTCCCCAACCGCAAGCCCGGCTTTTTCTACCGAG < SRR4302543.614047/94‑1 (MQ=60)
CGGATCGACAGGTTATCCATCATCTCCATCCCGCCGGGGATAATGCCATTGGCGATGATGTCACCAACCGCAAGCCCGGCTTTTTCTACCGAGT > SRR4302543.6608456/1‑94 (MQ=60)
CGGATCGACAGGTTATCCATCATCTCCAGCCCGCCGGGGATAATGCCATTGGCGATGATGTCACCAACCGCAAGCCCGGCTTTTTCTACCGAGT > SRR4302543.2364802/1‑94 (MQ=60)
CGGATCGACAGGTTATCCATCATCTCCAGCCCGCCGGGGATAATGCCATTGGCGATGATGTCACCAACCGCAAGCCCGGCTTTTTCTACCGAGT > SRR4302543.5518326/1‑94 (MQ=60)
GATCGACAGGTTATCCATCATCTCCAGCCCGCCGGGGATAATGCCATTGGCGATGATGTCACCAACCGCAAGCCCGGCTTTTTCTACCGAGTCA < SRR4302543.7282278/94‑1 (MQ=60)
ATCGACAGGTTATCCATCATCTCCAGCCCGCCGGGGATAATGCCATTGGCGATGATGTCACCAACCGCAAGCCCGGCTTTTTCTACCGAGTCAA < SRR4302543.3625922/94‑1 (MQ=60)
CGACAGGTTATCCATCATCTCCAGCCCGCCGGGGATAATGCCATTGGCGATGATGTCACCAACCGCAAGCCCGGCTTTTTCTACCGAGTCAAAG < SRR4302543.7300067/94‑1 (MQ=60)
CGACAGGTTATCCATCATCTCCAGCCCGCCGGGGATAATGCCATTGGCGATGATGTCACCAACCGCAAGCCCGGCTTTTTCTACCGAGTCAAAG > SRR4302543.6837847/1‑94 (MQ=60)
GACAGGTTATCCATCATCTCCAGCCCGCCGGGGATAATGCCATTGGCGATGATGTCACCAACCGCAAGCCCGGCTTTTTCTACCGAGTCAAAGC > SRR4302543.4961277/1‑94 (MQ=60)
GACAGGTTATCCATCATCTCCAGCCCGCCGGGGATAATGCCATTGGCGATGATGTCACCAACCGCAAGCCCGGCTTTTTCTACCGAGTCAAAGC > SRR4302543.772113/1‑94 (MQ=60)
GACAGGTTATCCATCATCTCCAGCCCGCCGGGGATAATGCCATTGGCGATGATGTCACCAACCGCAAGCCCGGCTTTTTCTACCGAGTCAAAGC > SRR4302543.985524/1‑94 (MQ=60)
GACAGGTTATCCATCATCTCCAGCCCGCCGGGGATAATGCCATTGGCGATGATGTCACCAACCGCAAGCCCGGCTTTTTCTACCGAGTCAAAGC > SRR4302543.1272356/1‑94 (MQ=60)
ACAGGTTATCCATCATCTCCAGCCCGCCGGGGATAATGCCATTGGCGATGATGTCACCAACCGCAAGCCCGGCTTTTTCTACCGAGTCAAAGCT > SRR4302543.4743230/1‑94 (MQ=60)
CAGGTTATCCATCATCTCCAGCCCGCCGGGGATAATGCCATTGGCGATGATGTCACCAACCGCAAGCCCGGCTTTTTCTACCGAGTCAAAGCTG > SRR4302543.7938681/1‑94 (MQ=60)
CAGGTGATCCATCATCTCCAGCCCGCCGGGGATAATGCCATTGGCGATGATGTCACCAACCGCAAGCCCGGCTTTTTCTACCGAGTCAAAGCTG < SRR4302543.6647665/94‑1 (MQ=60)
AGGTTATCCATCATCTCCAGCCCGCCGGGGATAATGCCATTGGCGATGATGTCACCAACCGCAAGCCCGGCTTTTTCTACCGAGTCAAAGCTGG < SRR4302543.5641422/94‑1 (MQ=60)
GGTTATCCATCATCTCCAGCCCGCCGGGGATAATGCCATTGGCGATGATGTCACCAACCGCAAGCCCGGCTTTTTCTACCGCGTCAAAGCTGCC > SRR4302543.4935733/1‑94 (MQ=60)
GTTATCCATCATCTCCAGCCCGCCGGGGATAATGCCATTGGCGATGATGTCACCAACCGCAAGCCCGGCTTTTTCTACCGAGTCAAAGCTGGCT > SRR4302543.2741093/1‑94 (MQ=60)
TATCCATCATCTCCAGCCCGCCGGGGATAATGCCATTGGCGATGATGTCACCAACCGCAAGCCCGGCTTTTTCTACCGAGTCAAAGCTGGCTAA > SRR4302543.992250/1‑94 (MQ=60)
ATCCATCATCTCCAGCCCGCCGGGGATAATGCCATTGGCGATGATGTCACCAACCGCAAGCCCGGCTTTTTCTACCGAGTCAAAGCTGGCTAAC < SRR4302543.4167275/94‑1 (MQ=60)
ATCCATCATCTCCAGCCCGCCGGGGATAATGCCATTGGCGATGATGTCACCAACCGCAAGCCCGGCTTTTTCTACCGAGTCAAAGCTGGCTAAC < SRR4302543.6351031/94‑1 (MQ=60)
ATCCATCATCTCCAGCCCGCCGGGGATAATGCCATTGGCGATGATGTCACCAACCGCAAGCCCGGCTTTTTCTACCGAGTCAAAGCTGGCTAAC > SRR4302543.7493382/1‑94 (MQ=60)
ATCCATCATCTCCAGCCCGCCGGGGATAATGCCATTGGCGATGATGTCACCAACCGCAAGCCCGGCTTTTTCTACCGAGTCAAAGCTGGCTAAC > SRR4302543.101455/1‑94 (MQ=60)
TCCATCATCTCCAGCCCGCCGGGGATAATGCCATTGGCGATGATGTCACCAACCGCAAGCCCGGCTTTTTCTACCGAGTCAAAGCTGGCTAACA < SRR4302543.7419164/94‑1 (MQ=60)
TCCATCATCTCCAGCCCGCCGGGGATAATGCCATTGGCGATGATGTCACCAACCGCAAGCCCGGCTTTTTCTACCGAGTCAAAGCTGGCTAACA < SRR4302543.3803414/94‑1 (MQ=60)
CCATCATCTCCAGCCCGCCGGGGATAATGCCATTGGCGATGATGTCACCAACCGCAAGCCCGGCTTTTTCTACCGAGTCAAAGCTGGCTAACAG > SRR4302543.7246965/1‑94 (MQ=60)
CCATCATCTCCAGCCCGCCGGGGATAATGCCATTGGCGATGATGTCACCAACCGCAAGCCCGGCTTTTTCTACCGAGTCAAAGCTGGCTAACAG < SRR4302543.1029800/94‑1 (MQ=60)
CCATCATCTCCAGCCCGCCGGGGATAATGCCATTGGCGATGATGTCACCAACCGCAAGCCCGGCTTTTTCTACCGAGTCAAAGCTGGCTAACAG < SRR4302543.1080995/94‑1 (MQ=60)
CATCATCTCCAGCCCGCCGGGGATAATGCCATTGGCGATGATGTCACCAACCGCAAGCCCGGCTTTTTCTACCGAGTCAAAGCTGGCTAACAGA < SRR4302543.486444/94‑1 (MQ=60)
CATCATCTCCAGCCCGCCGGGGATAATGCCATTGGCGATGATGTCACCAACCGCAAGCCCGGCTTTTTCTACCGAGTCAAAGCTGGCTAACAGA > SRR4302543.298602/1‑94 (MQ=60)
TCATCTCCAGCCCGCCGGGGATAATGCCATTGGCGATGATGTCACCAACCGCAAGCCCGGCTTTTTCTACCGAGTCAAAGCTGGCTAACAGAAC < SRR4302543.2034590/94‑1 (MQ=60)
TCATCTCCAGCCCGCCGGGGATAATGCCATTGGCGATGATGTCACCAACCGCAAGCCCGGCTTTTTCTACCGAGTCAAAGCTGGCTAACAGAAC < SRR4302543.7060825/94‑1 (MQ=60)
TCATCTCCAGCCCGCCGGGGATAATGCCATTGGCGATGATGTCACCAACCGCAAGCCCGGCTTTTTCTACCGAGTCAAAGCTGGCTAACAGAAC < SRR4302543.2464883/94‑1 (MQ=60)
TCATCTCCAGCCCGCCGGGGATAATGCCATTGGCGATGATGTCACCAACCGCAAGCCCGGCTTTTTCTACCGAGTCAAAGCTGGCTAACAGAAC < SRR4302543.2894012/94‑1 (MQ=60)
ATCTCCAGCCCGCCGGGGATAATGCCATTGGCGATGATGTCACCAACCGCAAGCCCGGCTTTTTCTACCGAGTCAAAGCTGGCTAACAGAACCC < SRR4302543.1162786/94‑1 (MQ=60)
ATCTCCAGCCCGCCGGGGATAATGCCATTGGCGATGATGTCACCAACCGCAAGCCCGGCTTTTTCTACCGAGTCAAAGCTGGCTAACAGAACCC < SRR4302543.5135829/94‑1 (MQ=60)
ATCTCCAGCCCGCCGGGGATAATGCCATTGGCGATGATGTCACCAACCGCAAGCCCGGCTTTTTCTACCGAGTCAAAGCTGGCTAACAGAACCC > SRR4302543.5549444/1‑94 (MQ=60)
ATCTCCAGCCCGCCGGGGATAATGCCATTGGCGATGATGTCACCAACCGCAAGCCCGGCTTTTTCTACCGAGTCAAAGCTGGCTAACAGAACCC > SRR4302543.5867412/1‑94 (MQ=60)
TCTCCAGCCCGCCGGGGATAATGCCATTGGCGATGATGTCACCAACCGCAAGCCCGGCTTTTTCTACCGAGTCAAAGCTGGCTAACAGAACCCG < SRR4302543.966158/94‑1 (MQ=60)
TCTCCAGCCCGCCGGGGATAATGCCATTGGCGATGATGTCACCAACCGCAAGCCCGGCTTTTTCTACCGAGTCAAAGCTGGCTAACAGAACCCG < SRR4302543.2735092/94‑1 (MQ=60)
CTCCAGCCCGCCGGGGATAATGCCATTGGCGATGCTGTCACCAACCGCAAGCCCGGCTTTTTCTACAGAGTCAACGCTGGCTACCAGAACCCGC > SRR4302543.7523639/1‑94 (MQ=60)
TCCAGCCCGCCGGGGATAATGCCATTGGCGATGATGTCACCAACCGCAAGCCCGGCTTTTTCTACCGAGTCAAAGCTGGCTAACAGAACCCGCG < SRR4302543.3642574/94‑1 (MQ=60)
CCAGCCCGCCGGGGATAATGCCATTGGCGATGATGTCACCAACCGCAAGCCCGGCTTTTTCTACCGAGTCAAAGCTGGCTAACAGAACCCGCGC > SRR4302543.6312960/1‑94 (MQ=60)
CAGCCCGCCGGGGATAATGCCATTGGCGATGATGTCACCAACCGCAAGCCCGGCTTTTTCTACCGAGTCAAAGCTGGCTAACAGAACCCGCGCC > SRR4302543.7146514/1‑94 (MQ=60)
AGCCCGCCGGGGATAATGCCATTGGCGATGATGTCACCAACCGCAAGCCCGGCTTTTTCTACCGAGTCAAAGCTGGCTAACAGAACCCGCGCCA > SRR4302543.3688196/1‑94 (MQ=60)
AGCCCGCCGGGGATAATGCCATTGGCGATGATGTCACCAACCGCAAGCCCGGCTTTTTCTACCGAGTCAAAGCTGGCTAACAGAACCCGCGCCA > SRR4302543.5218153/1‑94 (MQ=60)
AGCCCGCCGGGGATAATGCCATTGGCGATGATGTCACCAACCGCAAGCCCGGCTTTTTCTACCGAGTCAAAGCTGGCTAACAGAACCCGCGCCA > SRR4302543.1363892/1‑94 (MQ=60)
GCCCGCCGGGGATAATGCCATTGGCGATGATGTCACCAACCGCAAGCCCGGCTTTTTCTACCGAGTCAAAGCTGGCTAACAGAACCCGCGCCAC < SRR4302543.6549712/94‑1 (MQ=60)
CCCGCCGGGGATAATGCCATTGGCGATGATGTCACCAACCGCAAGCCCGGCTTTTTCTACCGAGTCAAAGCTGGCTAACAGAACCCGCGCCACG < SRR4302543.1179706/94‑1 (MQ=60)
CCCGCCGGGGATAATGCCATTGGCGATGATGTCACCAACCGCAAGCCCGGCTTTTTCTACCGAGTCAAAGCTGGCTAACAGAACCCGCGCCACG < SRR4302543.743450/94‑1 (MQ=60)
CGCCGGGGATAATGCCATTGGCGATTATGTCACCAACCGCAAGCCCGGCTTTTTCTACCGAGTCAAAGCTGGCTAACAGTACCCGCGCCACGGG > SRR4302543.7095107/1‑94 (MQ=60)
CGCCGGGGATAATGCCATTGGCGATGATGTCACCAACCGCAAGCCCGGCTTTTTCTACCGAGTCAAAGCTGGCTAACAGAACCCGCGCCACGGG < SRR4302543.2657650/94‑1 (MQ=60)
GCCGGGGATAATGCCATTGGCGATGATGTCACCAACCGCAAGCCCGGCTTTTTCTACCGAGTCAAAGCTGGCTAACAGAACCCGCGCCACGGGC > SRR4302543.7558516/1‑94 (MQ=60)
GCCGGGGATAATGCCATTGGCGATGATGTCACCAACCGCAAGCCCGGCTTTTTCTACCGAGTCAAAGCTGGCTAACAGAACCCGCGCCACGGGC > SRR4302543.6900691/1‑94 (MQ=60)
CCGGGGATAATGCCATTGGCGATGATGTCACCAACCGCAAGCCCGGCTTTTTCTACCGAGTCAAAGCTGGCTAACAGAACCCGCGCCACGGGCG > SRR4302543.1729933/1‑94 (MQ=60)
CCGGGGATAATGCCATTGGCGATGATGTCACCAACCGCAAGCCCGGCTTTTTCTACCGAGTCAAAGCTGGCTAACAGAACCCGCGCCACGGGCG > SRR4302543.4438314/1‑94 (MQ=60)
CCGGGGATAATGCCATTGGCGATGATGTCACCAACCGCAAGCCCGGCTTTTTCTACCGAGTCAAAGCTGGCTAACAGAACCCGCGCCACGGGCG < SRR4302543.6803167/94‑1 (MQ=60)
CGGGGATAATGCCATTGGCGATGATGTCACCAACCGCAAGCCCGGCTTTTTCTACCGAGTCAAAGCTGGCTAACAGAACCCGCGCCACGGGCGG > SRR4302543.968782/1‑94 (MQ=60)
GGGGATAATGCCATTGGCGATGATGTCACCAACCGCAAGCCCGGCTTTTTCTACCGAGTCAAAGCTGGCTAACAGAACCCGCGCCACGGGCGGC > SRR4302543.3211453/1‑94 (MQ=60)
GGGATAATGCCATTGGCGATGATGTCACCAACCGCAAGCCCGGCTTTTTCTACCGAGTCAAAGCTGGCTAACAGAACCCGCGCCACGGGCGGCT < SRR4302543.1029030/94‑1 (MQ=60)
GGGATAATGCCATTGGCGATGATGTCACCAACCGCAAGCCCGGCTTTTTCTACCGAGTCAAAGCTGGCTAACAGAACCCGCGCCACGGGCGGCT > SRR4302543.2630866/1‑94 (MQ=60)
GGGATAATGCCATTGGCGATGATGTCACCAACCGCAAGCCCGGCTTTTTCTACCGAGTCAAAGCTGGCTAACAGAACCCGCGCCACGGGCGGCT < SRR4302543.3857602/94‑1 (MQ=60)
GGGATAATGCCATTGGCGATGATGTCACCAACCGCAAGCCCGGCTTTTTCTACCGAGTCAAAGCTGGCTAACAGAACCCGCGCCACGGGCGGCT > SRR4302543.1110324/1‑94 (MQ=60)
GGATAATGCCATTGGCGATGATGTCACCAACCGCAAGCCCGGCTTTTTCTACCGAGTCAAAGCTGGCTAACAGAACCCGCGCCACGGGCGGCTT > SRR4302543.1851594/1‑94 (MQ=60)
ATAATGCCATTGGCGATGATGTCCCCAACCGCAAGCCCGGCTTTTTCTACCGAGTCAAAGCTGGCTAACAGATCCCGCGCCACGGGCGGCTTCG < SRR4302543.6910229/94‑1 (MQ=60)
ATAATGCCATTGGCGATGATGTCACCAACCGCAAGCCCGGCTTTTTCTACCGAGTCAAAGCTGGCTAACAGAACCCGCGCCACGGGCGGCTTCG > SRR4302543.4466328/1‑94 (MQ=60)
ATAATGCCATTGGCGATGATGTCACCAACCGCAAGCCCGGCTTTTTCTACCGAGTCAAAGCTGGCTAACAGAACCCGCGCCACGGGCGGCTTCG < SRR4302543.878544/94‑1 (MQ=60)
ATAATGCCATTGGCGATGATGTCACCAACCGCAAGCCCGGCTTTTTCTACCGAGTCAAAGCTGGCTAACAGAACCCGCGCCACGGGCGGCTTCG > SRR4302543.5837294/1‑94 (MQ=60)
AATGCCATTGGCGATGATGTCACCAACCGCAAGCCCGGCTTTTTCTACCGAGTCAAAGCTGGCTAACAGAACCCGCGCCACGGGCGGCTTCGGC > SRR4302543.2533563/1‑94 (MQ=60)
ATGCCATTGGCGATGATGTCACCAACCGCAAGCCCGGCTTTTTCTACCGAGTCAAAGCTGGCTAACAGAACCCGCGCCACGGGCGGCTTCGGCA > SRR4302543.6508256/1‑94 (MQ=60)
TGCCATTGGCGATGATGTCACCAACCGCAAGCCCGGCTTTTTCTACCGAGTCAAAGCTGGCTAACAGAACCCGCGCCACGGGCGGCTTCGGCAG > SRR4302543.5847476/1‑94 (MQ=60)
GCCATTGGCGATGATGTCACCAACCGCAAGCCCGGCTTTTTCTACCGAGTCAAAGCTGGCTAACAGAACCCGCGCCACGGGCGGCTTCGGCAGC > SRR4302543.1325604/1‑94 (MQ=60)
GCCATTGGCGATGATGTCACCAACCGCAAGCCCGGCTTTTTCTACCGAGTCAAAGCTGGCTAACAGAACCCGCGCCACGGGCGGCTTCGGCAGC > SRR4302543.3622461/1‑94 (MQ=60)
CATTGGCGATGATGTCACCAACCGCAAGCCCGGCTTTTTCTACCGAGTCAAAGCTGGCTAACAGAACCCGCGCCACGGGCGGCTTCGGCAGCAG > SRR4302543.1214370/1‑94 (MQ=60)
CATTGGCGATGATGTCACCAACCGCAAGCCCGGCTTTTTCTACCGAGTCAAAGCTGGCTAACAGAACCCGCGCCACGGGCGGCTTCGGCAGCAG < SRR4302543.460394/94‑1 (MQ=60)
CATTGGCGATGATGTCACCAACCGCAAGCCCGGCTTTTTCTACCGAGTCAAAGCTGGCTAACAGAACCCGCGCCACGGGCGGCTTCGGCAGCAG > SRR4302543.4418125/1‑94 (MQ=60)
CATTGGCGATGATGTCACCAACCGCAAGCCCGGCTTTTTCTACCGAGTCAAAGCTGGCTAACAGAACCCGCGCCACGGGCGGCTTCGGCAGCAG > SRR4302543.261306/1‑94 (MQ=60)
ATTGGCGATGATGTCACCAACCGCAAGCCCGGCTTTTTCTACCGAGTCAAAGCTGGCTAACAGAACCCGCGCCACGGGCGGCTTCGGCAGCAGC > SRR4302543.337729/1‑94 (MQ=60)
ATTGGCGATGATGTCACCAACCGCAAGCCCGGCTTTTTCTACCGAGTCAAAGCTGGCTAACAGAACCCGCGCCACGGGCGGCTTCGGCAGCAGC > SRR4302543.483804/1‑94 (MQ=60)
ATTGGCGATGATGTCACCAACCGCAAGCCCGGCTTTTTCTACCGAGTCAAAGCTGGCTAACAGAACCCGCGCCACGGGCGGCTTCGGCAGCAGC > SRR4302543.3012221/1‑94 (MQ=60)
ATTGGCGATGATGTCACCAACCGCAAGCCCGGCTTTTTCTACCGAGTCAAAGCTGGCTAACAGAACCCGCGCCACGGGCGGCTTCGGCAGCAGC > SRR4302543.5030792/1‑94 (MQ=60)
TTGGCGATGATGTCACCAACCGCAAGCCCGGCTTTTTCTACCGAGTCAAAGCTGGCTAACAGAACCCGCGCCACGGGCGGCTTCGGCAGCAGCT < SRR4302543.4940582/94‑1 (MQ=60)
GGCGATGATGTCACCAACCGCAAGCCCGGCTTTTTCTACCGAGTCAAAGCTGGCTAACAGACCCCGCGCCACGGGCGGCTTCGGCAGCAGCTTT < SRR4302543.1831036/94‑1 (MQ=60)
GGCGATGATGTCACCAACCGCAAGCCCGGCTTTTTCTACCGAGTCAAAGCTGGCTAACAGAACCCGCGCCACGGGCGGCTTCGGCAGCAGCTTT < SRR4302543.739608/94‑1 (MQ=60)
CGATGATGTCACCAACCGCAAGCCCGGCTTTTTCTACCGAGTCAAAGCTGGCTAACAGAACCCGCGCCACGGGCGGCTTCGGCAGCAGCTTTAC > SRR4302543.6069244/1‑94 (MQ=60)
CGATGATGTCACCAACCGCAAGCCCGGCTTTTTCTACCGAGTCAAAGCTGGCTAACAGAACCCGCGCCACGGGCGGCTTCGGCAGCAGCTTTAC < SRR4302543.2539261/94‑1 (MQ=60)
CGATGATGTCACCAACCGCAAGCCCGGCTTTTTCTACCGAGTCAAAGCTGGCTAACAGAACCCGCGCCACGGGCGGCTTCGGCAGCAGCTTTAC > SRR4302543.2900385/1‑94 (MQ=60)
CGATGATGTCACCAACCGCAAGCCCGGCTTTTTCTACCGAGTCAAAGCTGGCTAACAGAACCCGCGCCACGGGCGGCTTCGGCAGCAGCTTTAC < SRR4302543.6774652/94‑1 (MQ=60)
gatgattgctCCAACCGCAAGCCCGGCTTTTTCTACCGAGTCAAAGCTGGCTAACAGACCCCGCGCCACGGGCGGCTTCGGCAGCAGCTTTACC < SRR4302543.7439198/84‑1 (MQ=60)
GATGATGTCACCAACCGCAAGCCCGGCTTTTTCTACCGAGTCAAAGCTGGCTAACAGAACCCGCGCCACGGGCGGCTTCGGCAGCAGCTTTACC > SRR4302543.6535861/1‑94 (MQ=60)
GATGATGTCACCAACCGCAAGCCCGGCTTTTTCTACCGAGTCAAAGCTGGCTAACAGAACCCGCGCCACGGGCGGCTTCGGCAGCAGCTTTACC < SRR4302543.2629758/94‑1 (MQ=60)
GATGATGTCACCAACCGCAAGCCCGGCTTTTTCTACCGAGTCAAAGCTGGCTAACAGAACCCGCGCCACGGGCGGCTTCGGCAGCAGCTTTACC > SRR4302543.2423869/1‑94 (MQ=60)
GATGATGTCACCAACCGCAAGCCCGGCTTTTTCTACCGAGTCAAAGCTGGCTAACAGAACCCGCGCCACGGGCGGCTTCGGCAGCAGCTTTACC > SRR4302543.2731968/1‑94 (MQ=60)
GATGATGTCACCAACCGCAAGCCCGGCTTTTTCTACCGAGTCAAAGCTGGCTAACAGAACCCGCGCCACGGGCGGCTTCGGCAGCAGCTTTACC > SRR4302543.6875895/1‑94 (MQ=60)
GATGATGTCACCAACCGCAAGCCCGGCTTTTTCTACCGAGTCAAAGCTGGCTAACAGAACCCGCGCCACGGGCGGCTTCGGCAGCAGCTTTACC > SRR4302543.6875896/1‑94 (MQ=60)
GATGATGTCACCAACCGCAAGCCCGGCTTTTTCTACCGAGTCAAAGCTGGCTAACAGAACCCGCGCCACGGGCGGCTTCGGCAGCAGCTTTACC > SRR4302543.90681/1‑94 (MQ=60)
GATGATGTCACCAACCGCAAGCCCGGCTTTTTCTACCGAGTCAAAGCTGGCTAACAGAACCCGCGCCACGGGCAGCTTCGGCAGCAGCTTTACC > SRR4302543.6899159/1‑94 (MQ=60)
GATGATATCACCAACCGCAAGCCCGGCTTTTTCTACCGAGTCAAAGCTGGCTAACAGAACCCGCGCCATGGGCAGCTTCGGCAGCAGCTTTACC > SRR4302543.6899158/1‑94 (MQ=60)
ATGATGTCACCAACCGCAAGCCCGGCTTTTTCTACCGAGTCAAAGCTGGCTAACAGAACCCGCGCCACGGGCGGCTTCGGCAGCAGCTTTACCG > SRR4302543.1729939/1‑94 (MQ=60)
TGATGTCACCAACCGCAAGCCCGGCTTTTTCTACCGAGTCAAAGCTGGCTAACAGAACCCGCGCCACGGGCGGCTTCGGCAGCAGCTTTACCGT > SRR4302543.1547422/1‑94 (MQ=60)
TGATGTCACCAACCGCAAGCCCGGCTTTTTCTACCGAGTCAAAGCTGGCTAACAGAACCCGCGCCACGGGCGGCTTCGGCAGCAGCTTTACCGT > SRR4302543.4613527/1‑94 (MQ=60)
TGATGTCACCAACCGCAAGCCCGGCTTTTTCTACCGAGTCAAAGCTGGCTAACAGAACCCGCGCCACGGGCGGCTTCGGCAGCAGCTTTACCGT > SRR4302543.1910674/1‑94 (MQ=60)
GATGTCACCAACCGCAAGCCCGGCTTTTTCTACCGAGTCAAAGCTGGCTAACAGAACCCGCGCCACGGGCGGCTTCGGCAGCAGCTTTACCGTC < SRR4302543.2610317/94‑1 (MQ=60)
GATGTCACCAACCGCAAGCCCGGCTTTTTCTACCGAGTCAAAGCTGGCTAACAGAACCCGCGCCACGGGCGGCTTCGGCAGCAGCTTTACCGTC < SRR4302543.4218360/94‑1 (MQ=60)
ATGTCACCAACCGCAAGCCCGGCTTTTTCTACCGAGTCAAAGCTGGCTAACAGAACCCGCGCCACGGGCGGCTTCGGCAGCAGCTTTACCGTCA < SRR4302543.2607280/94‑1 (MQ=60)
ATGTCACCAACCGCAAGCCCGGCTTTTTCTACCGAGTCAAAGCTGGCTAACAGAACCCGCGCCACGGGCGGCTTCGGCAGCAGCTTTACCGTCA > SRR4302543.1526678/1‑94 (MQ=60)
GTCACCAACCGCAAGCCCGGCTTTTTCTACCGAGTCAAAGCTGGCTAACAGAACCCGCGCCACGGGCGGCTTCGGCAGCAGCTTTACCGTCACT > SRR4302543.4946119/1‑94 (MQ=60)
GTCACCAACCGCAAGCCCGGCTTTTTCTACCGAGTCAAAGCTGGCTAACAGAACCCGCGCCACGGGCGGCTTCGGCAGCAGCTTTACCGTCACT > SRR4302543.5830041/1‑94 (MQ=60)
TCACCAACCGCAAGCCCGGCTTTTTCTACCGAGTCAAAGCTGGCTAACAGAACCCGCGCCACGGGCGGCTTCGGCAGCAGCTTTACCGTCACTT < SRR4302543.4327606/94‑1 (MQ=60)
CACCAACCGCAAGCCCGGCTTTTTCTACCGAGTCAAAGCTGGCTAACAGAACCCGCGCCACGGGCGGCTTCGGCAGCAGCTTTACCGTCACTTC < SRR4302543.6907796/94‑1 (MQ=60)
CACCAACCGCAAGCCCGGCTTTTTCTACCGAGTCAAAGCTGGCTAACAGAACCCGCGCCACGGGCGGCTTCGGCAGCAGCTTTACCGTCACTTC > SRR4302543.3230986/1‑94 (MQ=60)
CACCAACCGCAAGCCCGGCTTTTTCTACCGAGTCAAAGCTGGCTAACAGAACCCGCGCCACGGGCGGCTTCGGCAGCAGCTTTACCGTCACTTC > SRR4302543.7437486/1‑94 (MQ=60)
CCAACCGCAAGCCCGGCTTTTTCTACCGAGTCAAAGCTGGCTAACAGAACCCGCGCCACGGGCGGCTTCGGCAGCAGCTTTACCGTCACTTCGG > SRR4302543.5385391/1‑94 (MQ=60)
CCAACCGCAAGCCCGGCTTTTTCTACCGAGTCAAAGCTGGCTAACAGAACCCGCGCCACGGGCGGCTTCGGCAGCAGCTTTACCGTCACTTCGG > SRR4302543.7504031/1‑94 (MQ=60)
CAACCGCAAGCCCGGCTTTTTCTACCGAGTCAAAGCTGGCTAACAGAACCCGCGCCACGGGCGGCTTCGGCAGCAGCTTTACCGTCACTTCGGT < SRR4302543.3544809/94‑1 (MQ=60)
CAACCGCAAGCCCGGCTTTTTCTACCGAGTCAAAGCTGGCTAACAGAACCCGCGCCACGGGCGGCTTCGGCAGCAGCTTTACCGTCACTTCGGT > SRR4302543.2084100/1‑94 (MQ=60)
CAACCGCAAGCCCGGCTTTTTCTACCGAGTCAAAGCTGGCTAACAGAACCCGCGCCACGGGCGGCTTCGGCAGCAGCTTTACCGTCACTTCGGT > SRR4302543.5643986/1‑94 (MQ=60)
CAACCGCAAGCCCGGCTTTTTCTACCGAGTCAAAGCTGGCTAACAGAACCCGCGCCACGGGCGGCTTCGGCAGCAGCTTTACCGTCACTTCGGT > SRR4302543.6256375/1‑94 (MQ=60)
CAACCGCAAGCCCGGCTTTTTCTACCGAGTCAAAGCTGGCTAACAGAACCCGCGCCACGGGCGGCTTCGGCAGCAGCTTTACCGTCACTTCGGT > SRR4302543.1529573/1‑94 (MQ=60)
AACCGCAAGCCCGGCTTTTTCTACCGAGTCAAAGCTGGCTAACAGAACCCGCGCCACGGGCGGCTTCGGCAGCAGCTTTACCGTCACTTCGGTG < SRR4302543.7493488/94‑1 (MQ=60)
ACCGCAAGCCCGGCTTTTTCTACCGAGTCAAAGCTGGCTAACAGAACCCGTGCCACGGGCGGCTTCGGCACCAGCTTTACCGTCACTTCGGTGG < SRR4302543.5561905/94‑1 (MQ=60)
ACCGCAAGCCCGGCTTTTTCTACCGAGTCAAAGCTGGCTAACAGAACCCGCGCCACGGGCGGCTTCGGCAGCAGCTTTACCGTCACTTCGGTGG > SRR4302543.178895/1‑94 (MQ=60)
CGCAAGCCCGGCTTTTTCTACCGAGTCAAAGCTGGCTAACAGAACCCGCGCCACGGGCGGCTTCGGCAGCAGCTTTACCGTCACTTCGGTGGTC < SRR4302543.7912773/94‑1 (MQ=60)
CGCAAGCCCGGCTTTTTCTACCGAGTCAAAGCTGGCTAACAGAACCCGCGCCACGGGCGGCTTCGGCAGCAGCTTTACCGTCACTTCGGTGGTC > SRR4302543.7944080/1‑94 (MQ=60)
CGCAAGCCCGGCTTTTTCTACCGAGTCAAAGCTGGCTAACAGAACCCGCGCCACGGGCGGCTTCGGCAGCAGCTTTACCGTCACTTCGGTGGTC > SRR4302543.6083774/1‑94 (MQ=60)
CGCAAGCCCGGCTTTTTCTACCGAGTCAAAGCTGGCTAACAGAACCCGCGCCACGGGCGGCTTCGGCAGCAGCTTTACCGTCACTTCGGTGGTC > SRR4302543.6387488/1‑94 (MQ=60)
GCAAGCCCGGCTTTTTCTACCGAGTCAAAGCTGGCTAACAGAACCCGCGCCACGGGCGGCTTCGGCAGCAGCTTTACCGTCACTTCGGTGGTCA > SRR4302543.967997/1‑94 (MQ=60)
CAAGCCCGGCTTTTTCTACCGAGTCAAAGCTGGCTAACAGAACCCGCGCCACGGGCGGCTTCGGCAGCAGCTTTACCGTCACTTCGGTGGTCAC < SRR4302543.4807856/94‑1 (MQ=60)
CAAGCCCGGCTTTTTCTACCGAGTCAAAGCTGGCTAACAGAACCCGCGCCACGGGCGGCTTCGGCAGCAGCTTTACCGTCACTTCGGTGGTCAC < SRR4302543.757649/94‑1 (MQ=60)
CAAGCCCGGCTTTTTCTACCGAGTCAAAGCTGGCTAACAGAACCCGCGCCACGGGCGGCTTCGGCAGCAGCTTTACCGTCACTTCGGTGGTCAC < SRR4302543.5132601/94‑1 (MQ=60)
CAAGCCCGGCTTTTTCTACCGAGTCAAAGCTGGCTAACAGAACCCGCGCCACGGGCGGCTTCGGCAGCAGCTTTACCGTCACTTCGGTGGTCAC < SRR4302543.3620372/94‑1 (MQ=60)
GCCCGGCTTTTTCTACCGAGTCAAAGCTGGCTAACAGAACCCGCGCCACGGGCGGCTTCGGCAGCAGCTTTACCGTCACTTCGGTGGTCACGCC < SRR4302543.6045172/94‑1 (MQ=60)
CCCGGCTTTTTCTACCGAGTCAACGCTGGCTAACAGAACCCGCGCCACGGGCGGCTTCGGCAGCAGCTTTCCCGTCACTTCGCTGGTTGCGCCG > SRR4302543.4101132/1‑94 (MQ=60)
CCCGGCTTTTTCTACCGAGTCAAAGCTGGCTAACAGAACCCGCGCCACGGGCGGCTTCGGCAGCAGCTTTACCGTCACTTCGGTGGTCACGCCG < SRR4302543.7473014/94‑1 (MQ=60)
CCCGGCTTTTTCTACCGAGTCAAAGCTGGCTAACAGAACCCGCGCCACGGGCGGCTTCGGCAGCAGCTTTACCGTCACTTCGGTGGTCACGCCG > SRR4302543.5124097/1‑94 (MQ=60)
CCCGGCTTTTTCTACCGAGTCAAAGCTGGCTAACAGAACCCGCGCCACGGGCGGCTTCGGCAGCAGCTTTACCGTCACTTCGGTGGTCACGCCG > SRR4302543.6891980/1‑94 (MQ=60)
CCCGGCTTTTTCTACCGAGTCAAAGCTGGCTAACAGAACCCGCGCCACGGGCGGCTTCGGCAGCAGCTTTACCGTCACTTCGGTGGTCACGCCG > SRR4302543.6670071/1‑94 (MQ=60)
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AATAAAATCTTCCGCCGCGCGGATCGACAGGTTATCCATCATCTCCAGCCCGCCGGGGATAATGCCATTGGCGATGATGTCACCAACCGCAAGTCCGGCTTTTTCTACCGAGTCAAAGCTGGCTAACAGAACCCGCGCCACGGGCGGCTTCGGCAGCAGTTTTACCGTCACTTCGGTGGTCACGCCG > NC_000913/3125200‑3125386
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 2 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
