Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I1 R1
|
1696 |
279.3 |
15874187 |
97.8% |
15524954 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| MC JC |
NC_000913 |
3,156,257 |
(CCA)2→1 |
coding (594‑596/930 nt) |
yqhG → |
hypothetical protein |
|
| | | | seq id |
start |
end |
size |
←reads |
reads→ |
gene |
description |
|---|
| * |
* |
÷ |
NC_000913 |
3156257 |
3156259 |
3 |
378 [0] |
[0] 380 |
yqhG |
hypothetical protein |
|
| |
seq id |
position |
reads (cov) |
reads (cov) |
score |
skew |
freq |
annotation |
gene |
product |
| * |
? |
NC_000913 |
= 3156256 | 0 (0.000) | 360 (1.210) |
143/178 |
0.1 |
100% |
coding (593/930 nt) |
yqhG |
hypothetical protein |
| ? | NC_000913 |
3156260 = |
0 (0.000) | coding (597/930 nt) |
yqhG |
hypothetical protein |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
AGAACAGCCGGAAGCCTTTGTTGCCGAACTCTTTGAACATATTGCTGATTATAGCTGGCCGTGGACGTGGGTGGTTTCCGACTCTTACCGCCACCAGGCGGTTAATGCCTTCTATAAAACCACCTTCAAGACGGCCAATAATCCCGATGAAGATATGCAAATAGAACGGCAATTTATTTACGACAAT > NC_000913/3156164‑3156350
|
AGAACAGCCGGAAGCCTTTGTTGCCGAACTCTTTGAACATATTGCTGATTATAGCTGGCCGTGGACGTGGGTGGTTTCCGACTCTTACCGCCAG < SRR4302543.6343440/94‑1 (MQ=60)
AGAACAGCCGGAAGCCTTTGTTGCCGAACTCTTTGAACATATTGCTGATTATAGCCGGCCGTGGACGTGGGTGGTTTCCGACTCTTACCGCCAG < SRR4302543.1280816/94‑1 (MQ=60)
CAGCCGGAAGCCTTTGTTGCCGAACTCTTTGAACATATTGCTGATTATAGCTGGCCGTGGACGTGGGTGGTTTCCGACTCTTACCG‑‑‑CCAGGCGG > SRR4302543.3538774/1‑94 (MQ=60)
AGCCGGAAGCCTTTGTTGCCGAACTCTTTGAACATATTGCTGATTATAGCTGGCCGTGGACGTGGGTGGTTTCCGACTCTTACCG‑‑‑CCAGGCGGT > SRR4302543.2481344/1‑94 (MQ=60)
AGCCGGAAGCCTTTGTTGCCGAACTCTTTGAACATATTGCTGATTATAGCTGGCCGTGGACGTGGGTGGTTTCCGACTCTTACCG‑‑‑CCAGGCGGT > SRR4302543.6907871/1‑94 (MQ=60)
CCGGAAGCCTTTGTTGCCGAACTCTTTGCACATATTGCTGATTATAGCTGGCCGTGGACGTGGGTGGCTTCCGACTCTTACCG‑‑‑CCAGGCGGTTA > SRR4302543.572516/1‑94 (MQ=60)
CCGGAAGCCTTTGTTGCCGAACTCTTTGAACATATTGCTGATTATAGCTGGCCGTGGACGTGGGTGGTTTCCGACTCTTACCG‑‑‑CCAGGCGGTTA > SRR4302543.6637539/1‑94 (MQ=60)
CCGGAAGCCTTTGTTGCCGAACTCTTTGAACATATTGCTGATTATAGCTGGCCGTGGACGTGGGTGGTTTCCGACTCTTACCG‑‑‑CCAGGCGGTTA > SRR4302543.6543318/1‑94 (MQ=60)
CGGAAGCCTTTGTTGCCGAACTCTTTGAACATATTGCTGATTATAGCTGGCCGTGGACGTGGGTGGTTTCCGACTCTTACCG‑‑‑CCAGGCGGTTAA > SRR4302543.210824/1‑94 (MQ=60)
GGAAGCCTTTGTTGCCGAACTCTTTGAACATATTGCTGATTATAGCTGGCCGTGGACGTGGGTGGTTTCCGACTCTTACCG‑‑‑CCAGGCGGTTAAT > SRR4302543.2046816/1‑94 (MQ=60)
GGAAGCCTTTGTTGCCGAACTCTTTGAACATATTGCTGATTATAGCTGGCCGTGGACGTGGGTGGTTTCCGACTCTTACCG‑‑‑CCAGGCGGTTAAT > SRR4302543.1790625/1‑94 (MQ=60)
GGAAGCCTTTGTTGCCGAACTCTTTGAACATATTGCTGATTATAGCTGGCCGTGGACGTGGGTGGTTTCCGACTCTTACCG‑‑‑CCAGGCGGTTAAT > SRR4302543.2608338/1‑94 (MQ=60)
GGAAGCCTTTGTTGCCGAACTCTTTGAACATATTGCTGATTATAGCTGGCCGTGGACGTGGGTGGTTTCCGACTATTACCG‑‑‑CCAGGCGGTTAAT < SRR4302543.2929648/94‑1 (MQ=60)
GAAGCCTTTGTTGCCGAACTCTTTGAACATATTGCTGATTATAGCTGGCCGTGGACGTGGGTGGTTTCCGACTCTTACCG‑‑‑CCAGGCGGTTAATG < SRR4302543.4592263/94‑1 (MQ=60)
AAGCCTTTGTTGCCGAACTCTTTGAACATATTGCTGATTATAGCTGGCCGTGGACGTGGGTGGTTTCCGACTCTTACCG‑‑‑CCAGGCGGTTAATGC < SRR4302543.5095176/94‑1 (MQ=60)
AAGCCTTTGTTGCCGAACTCTTTGAACATATTGCTGATTATAGCTGGCCGTGGACGTGGGTGGTTTCCGACTCTTACCG‑‑‑CCAGGCGGTTAATGC > SRR4302543.3055452/1‑94 (MQ=60)
AAGCCTTTGTTGCCGAACTCTTTGAACATATTGCTGATTATAGCTGGCCGTGGACGTGGGTGGTTTCCGACTCTTACCG‑‑‑CCAGGCGGTTAATGC < SRR4302543.5451745/94‑1 (MQ=60)
AGCCTTTGTTGCCGAACTCTTTGAACATATTGCTGATTATAGCTGGCCGTGGACGTGGGTGGTTTCCGACTCTTACCG‑‑‑CCAGGCGGTTAATGCC > SRR4302543.6397143/1‑94 (MQ=60)
CCTTTGTTGCCGAACTCTTTGAACATATTGCTGATTATAGCTGGCCGTGGACGTGGGTGGTTTCCGACTCTTACCG‑‑‑CCAGGCGGTTAATGCCTT < SRR4302543.1490557/94‑1 (MQ=60)
CCTTTGTTGCCGAACTCTTTGAACATATTGCTGATTATAGCTGGCCGTGGACGTGGGTGGTTTCCGACTCTTACCG‑‑‑CCAGGCGGTTAATGCCTT > SRR4302543.1480992/1‑94 (MQ=60)
CCTTTGTTGCCGAACTCTTTGAACATATTGCTGATTATAGCTGGCCGTGGACGTGGGTGGTTTCCGACTCTTACCG‑‑‑CCAGGCGGTTAATGCCTT > SRR4302543.7971532/1‑94 (MQ=60)
CCTTTGTTGCCGAACTCTTTGAACATATTGCTGATTATAGCTGGCCGTGGACGTGGGTGGTTTCCGACTCTTACCG‑‑‑CCAGGCGGTTAATGCCTT < SRR4302543.984609/94‑1 (MQ=60)
CCTTTGTTGCCGAACTCTTTGAACATATTGCTGATTATAGCTGGCCGTGGACGTGGGTGGTTTCCGACTCTTACCG‑‑‑CCAGGCGGTTAATGCCTT < SRR4302543.3847214/94‑1 (MQ=60)
CCTTTGTTGCCGAACTCTTTGAACATATTGCTGATTATAGCTGGCCGTGGACGTGGGTGGATTCCGACTCTTACCG‑‑‑CCAGGCGGTTAATGCCTT > SRR4302543.7674559/1‑94 (MQ=60)
CCTTTGTTGCCGAACTCTTTGAACATATTGCTGATTATAGCTGGCAGTGGACGTGGGTGGTTTCCGACTCTTACCG‑‑‑CCAGGCGGTTAATGCCTT < SRR4302543.1045383/94‑1 (MQ=60)
CTTTGTTGCGGAACTCTTTGAACATATTGCTGATTATAGCTGGCCGTGGACGTGGGTGGTTTCCGACTCTTACCG‑‑‑CCAGGCGGTTAATGCCTTC < SRR4302543.3102281/94‑1 (MQ=60)
CTTTGTTGCCGAACTCTTTGAACATATTGCTGATTATAGCTGGCCGTGGACGTGGGTGGTTTCCGACTCTTACCG‑‑‑CCAGGCGGTTAATGCCTTC < SRR4302543.1725859/94‑1 (MQ=60)
TTTGTTGCCGAACTCTTTGAACCTATTGCTGATTATAGCTGGCCGTGGACGTGGGTGGTTTCCGACTCTTACCG‑‑‑CCAGGCGGTTAATGCCTTCT < SRR4302543.2294756/94‑1 (MQ=60)
TTGTTGCCGAACTCTTTGAACATATTGCTGATTATAGCTGGCCGTGGACGTGGGTGGTTTCCGACTCTTACCG‑‑‑CCAGGCGGTTAATGCCTTCTA > SRR4302543.1680263/1‑94 (MQ=60)
ttttgcagaagtcaagGAACATAGTGCTGACTATAGCTGGCCGTGGACGTGGGTGGTTTCCGACTCTTACCG‑‑‑CCAGGCGGTTAATGCCCTCTAT < SRR4302543.5908876/78‑1 (MQ=60)
TGTTGCCGAACTCTTTGAACATATTGCTGATTATAGCTGGCCGTGGACGTGGGTGGTTTCCGACTCTTACCG‑‑‑CCAGGCGGTTAATGCCTTCTAT < SRR4302543.4522924/94‑1 (MQ=60)
TGTTGCAGAACTCTTTGAACATATTGCTGATTATAGCTGGCCGTGGACGTGGGTGGTTTCCGACTCTTACCG‑‑‑CCAGGCGGTTAATGCCTTCTAT < SRR4302543.6571855/94‑1 (MQ=60)
GTTTCCGAACTCTTTGAACATATTGCTGATTATAGCTGGCCGTGGACGTGGGTGGTTTCCGACTCTTACCG‑‑‑CCAGGCGGTTAATGCCTTCTATA < SRR4302543.3873804/94‑1 (MQ=60)
GCCGAACTCTTTGAACATATTGCTGATTATAGCTGGCCGTGGACGTGGGTGGTTTCCGACTCTTACCG‑‑‑CCAGGCGGTTAATGCCTTCTATAAAA < SRR4302543.6689518/94‑1 (MQ=60)
CAGAACTCTTTGAACATATTGCTGATTATAGCTGGCCGTGGACGTGGGTGGTTTCCGACTCTTACCG‑‑‑CCAGGCGGTTAATGCCTTCTATAAAAC < SRR4302543.6204401/94‑1 (MQ=60)
CGAACTCTTTGAACATATTGCTGATTATAGCTGGCCGTGGACGTGGGTGGTTTCCGACTCTTACCG‑‑‑CCAGGCGGTTAATGCCTTCTATAAAACC > SRR4302543.6929109/1‑94 (MQ=60)
GAACTCTTTGAACATATTGCTGATTATAGCTGGCCGTGGACGTGGGTGGTTTCCGACTCTTACCG‑‑‑CCAGGCGGTTAATGCCTTCTATAAAACCA < SRR4302543.537415/94‑1 (MQ=60)
AACTCTTTGAACATATTGCTGATTATAGCTGGCCGTGGACGTGGGTGGTTTCCGACTCTTACCG‑‑‑CCAGGCGGTTAATGCCTTCTATAAAACCAC > SRR4302543.5755253/1‑94 (MQ=60)
AACTCTTTGAACATATTGCTGATTATAGCTGGCCGTGGACGTGGGTGGTTTCCGACTCTTACCG‑‑‑CCAGGCGGTTAATGCCTTCTATAAAACCAC < SRR4302543.6539176/94‑1 (MQ=60)
AACTCTTTGAACATATTGCTGATTATAGCTGGCCGTGGACGTGGGTGGTTTCCGACTCTTACCG‑‑‑CCAGGCGGTTAATGCCTTCTATAAAACCAC > SRR4302543.7573878/1‑94 (MQ=60)
AACTCTTTGAACATATTGCTGATTATAGCTGGCCGTGGACGTGGGTGGTTTCCGACTCTTACCG‑‑‑CCAGGCGGTTAATGCCTTCTATAAAACCAC > SRR4302543.3201575/1‑94 (MQ=60)
ACTCTTTGAACATATTGCTGATTATAGCTGGCCGTGGACGTGGGTGGTTTCCGACTCTTACCG‑‑‑CCAGGCGGTTAATGCCTTCTATAAAACTACC > SRR4302543.6556797/1‑94 (MQ=60)
ACTCTTTGAACATATTGCTGATTATAGCTGGCCGTGGACGTGGGTGGTTTCCGACTCTTACCG‑‑‑CCAGGCGGTTAATGCCTTCTATAAAACCACC > SRR4302543.3885334/1‑94 (MQ=60)
ACTCTTTGAACATATTGCTGATTATAGCTGGCCGCGGACGTGGGTGGTTTCCGACTCTTACCG‑‑‑CCAGGCGGTTAATGCCTTCTATAAAACCACC > SRR4302543.2409144/1‑94 (MQ=60)
CTCTTTGAACATATTGCTGATTATGGCTGGCCGTGGACGTGGGTGGTTTCCGACTCTTACCG‑‑‑CCAGGCGGTTAATGCCTTCTATAAAACCACCT < SRR4302543.7093590/94‑1 (MQ=60)
CTCTTTGAACATATTGCTGATTATAGCTGGCCGTGGACGTGGGTGGTTTCCGACTCTTACCG‑‑‑CCAGGCGGTTAATGCCTTCTATAAAACCACCT > SRR4302543.3071857/1‑94 (MQ=60)
CTCTTTGAACATATTGCTGATTATAGCTGGCCGTGGACGTGGGTGGTTTCCGACTCTTACCG‑‑‑CCAGGCGGTTAATGCCTTCTATAAAACCACCT > SRR4302543.5152205/1‑94 (MQ=60)
TCTTTGAACATATTGCTGATTATAGCTGGCCGTGGACGTGGGTGGTTTCCGACTCTTACCG‑‑‑CCAGGCGGTTAATGCCTTCTATAAAACCACCTT < SRR4302543.4377300/94‑1 (MQ=60)
TCTTTGAACATATTGCTGATTATAGCTGGCCGTGGACGTGGGTGGTTTCCGACTCTTACCG‑‑‑CCAGGCGGTTAATGCCTTCTATAAAACCACCTT < SRR4302543.526842/94‑1 (MQ=60)
TCTTTGAACATATTGCTGATTATAGCTGGCCGTGGACGTGGGTGGTTTCCGACTCTTACCG‑‑‑CCAGGCGGTTAATGCCTTCTATAAAACCACCTT < SRR4302543.7572935/94‑1 (MQ=60)
TCTTTGAACATATTGCTGATTATAGCTGGCCGTGGACGTGGGTGGTTTCCGACTCTTACCG‑‑‑CCAGGCGGTTAATGCCTTCTATAAAACCACCTT > SRR4302543.6026569/1‑94 (MQ=60)
TCTTTGAACATATTGCTGATTATAGCTGGCCGTGGACGTGGGTGGTTTCCGACTCTTACCG‑‑‑CCAGGCGGCTAATGCCTTCTATAAAACCACCTT < SRR4302543.7572936/94‑1 (MQ=60)
CTTTGAACATATTGCTGATTATAGCTGGCCGTGGACGTGGGTGGTTTCCGACTCTTACCG‑‑‑CCAGGCGGTTAATGCCTTCTATAAAACCACCTTC > SRR4302543.3177590/1‑94 (MQ=60)
CTTTGAACATATTGCTGATTATAGCTGGCCGTGGACGTGGGTGGTTTCCGACTCTTACCG‑‑‑CCAGGCGGTTAATGCCTTCTATAAAACAACCTTA > SRR4302543.7487923/1‑94 (MQ=60)
TTTGAACATATTGCTGATTATAGCTGGCCGTGGACGTGGGTGGTTTCCGACTCTTACCG‑‑‑CCAGGCGGTTAATGCCTTCTATAAAACCACCTTCA > SRR4302543.383513/1‑94 (MQ=60)
TTGAACATATTGCTGATTATAGCTGGCCGTGGACGTGGGTGGTTTCCGACTCTTACCG‑‑‑CCAGGCGGTTAATGCCTTCTATAAAACCACCTTCAA < SRR4302543.1070466/94‑1 (MQ=60)
TGAACATATTGCTGATTATAGCTGGCCGTGGACGTGGGTGGTTTCCGACTCTTACCG‑‑‑CCAGGCGGTTAATGCCTTCTATAAAACCACCTTCAAG < SRR4302543.117022/94‑1 (MQ=60)
TGAACATATTGCTGATTATAGCTGGCCGTGGACGTGGGTGGTTTCCGACTCTTACCG‑‑‑CCAGGCGGTTAATGCCTTCTATAAAACCACCTTCAAG > SRR4302543.204421/1‑94 (MQ=60)
GAACATATTGCTGATTATAGCTGGCCGTGGACGTGGGTGGTTTCCGACTCTTACCG‑‑‑CCAGGCGGTTAATGCCTTCTATAAAACCACCTTCAAGA < SRR4302543.537627/94‑1 (MQ=60)
GAACATATTGCTGATTATAGCTGGCCGTGGACGTGGGTGGTTTCCGACTCTTACCG‑‑‑CCAGGCGGTTAATGCCTTCTATAAAACCACCTTCAAGA > SRR4302543.5379967/1‑94 (MQ=60)
AACATATTGCTGATTATAGCTGGCCGTGGACGTGGGTGGTTTCCGACTCTTACCG‑‑‑CCAGGCGGTTAATGCCTTCTATAAAACCACCTTCAAGAC < SRR4302543.182717/94‑1 (MQ=60)
ACATATTGCTGATTATAGCTGGCCGTGGACGTGGGTGGTTTCCGACTCTTACCG‑‑‑CCAGGCGGTTAATGCCTTCTATAAAACCACCTTCAAGACG < SRR4302543.3792357/94‑1 (MQ=60)
ACATATTGCTGATTATAGCTGGCCGTGGACGTGGGTGGTTTCCGACTCTTACCG‑‑‑CCAGGCGGTTAATGCCTTCTATAAAACCACCTTCAAGACG > SRR4302543.4609177/1‑94 (MQ=60)
ACATATTGCTGATTATAGCTGGCCGTGGACGTGGGTGGTTTCCGACTCTTACCG‑‑‑CCAGGCGGTTAATGCCTTCTATAAAACCACCTTCAAGACG < SRR4302543.6614091/94‑1 (MQ=60)
ACATATTGCTGATTATAGCTGGCCGTGGACGTGGGTGGTTTCCGACTCTTACCG‑‑‑CCAGGCGGTTAATGCCTTCTATAAAACCACCTTCAAGACG > SRR4302543.5390479/1‑94 (MQ=60)
ACATATTGCTGATTATAGCTGGCCGTGGACGTGGGTGGTTTCCGACTCTTACCG‑‑‑CCAGGCGGTTAATGCCTTCTATAAAACCACCTTCAAGACG < SRR4302543.3918789/94‑1 (MQ=60)
CATATTGCTGATTATAGCTGGCCGTGGACGTGGGTGGTTTCCGACTCTTACCG‑‑‑CCAGGCGGTTAATGCCTTCTATAAAACCACCTTCAAGACGG > SRR4302543.7963429/1‑94 (MQ=60)
CATATTGCTGATTATAGCTGGCCGTGGACGTGGGTGGTTTCCGACTCTTACCG‑‑‑CCAGGCGGTTAATGCCTTCTATAAAACCACCTTCAAGACGG > SRR4302543.4970366/1‑94 (MQ=60)
ATATTGCTGATTATAGCTGGCCGTGGACGTGGGTGGTTTCCGACTCTTACCG‑‑‑CCAGGCGGTTAATGCCTTCTATAAAACCACCTTCAAGACGGC > SRR4302543.739085/1‑94 (MQ=60)
ATATTGCGGATTATAGCTGGCCGTGGACGTGGGTGGTTTCCGACTCTTACCG‑‑‑CCAGGCGGTTAATGCCTTCTATAAAACCACCTTCAAGACGGC > SRR4302543.6151159/1‑94 (MQ=60)
TATTGCTGATTATAGCTGGCCGTGGACGTGGGTGGTTTCCGAGTCTTACCG‑‑‑CCAGGCGGTTAATGCCTTCTATAAAACCACCTTCAAGACGGCC > SRR4302543.3000514/1‑94 (MQ=60)
TATTGCTGATTATAGCTGGCCGTGGACGTGGGTGGTTTCCGACTCTTACCG‑‑‑CCAGGCGGTTAATGCCTTCTATAAAACCACCTTCAAGACGGCC > SRR4302543.3000515/1‑94 (MQ=60)
ATTGCTGATTATAGCTGGCCGTGGACGTGGGTGGTTTCCGACTCTTACCG‑‑‑CCAGGCGGTTAATGCCTTCTATAAAACCACCTTCAAGACGGCCA > SRR4302543.3941104/1‑94 (MQ=60)
TTGCTGATTATAGCTGGCCGTGGACGTGGGTGGTTTCCGACTCTTACCG‑‑‑CCAGGCGGTTAATGCCTTCTATAAAACCACCTTCAAGACGGCCAA < SRR4302543.2522254/94‑1 (MQ=60)
TTGCTGATTATAGCTGGCCGTGGACGTGGGTGGTTTCCGACTCTTACCG‑‑‑CCAGGCGGTTAATGCCTTCTATAAAACCACCTTCAAGACGGCCAA < SRR4302543.7595863/94‑1 (MQ=60)
TGCTGATTATAGCTGGCCGTGGACGTGGGTGGTTTCCGACTCTTACCG‑‑‑CCAGGCGGTTAATGCCTTCTATAAAACCACCTTCAAGACGGCCAAT < SRR4302543.6517337/94‑1 (MQ=60)
TGCTGATTATAGCTGGCCGTGGACGTGGGTGGTTTCCGACTCTTACCG‑‑‑CCAGGCGGTTAATGCCTTCTATAAAACCACCTTCAAGACGGCCAAT < SRR4302543.1887007/94‑1 (MQ=60)
GCTGATTATAGCTGGCCGTGGACGTGGGTGGTTTCCGGCTCTTACCG‑‑‑CCAGGCGGTTAATGCCTTCTATAAAACCACCTTCAAGACGGCCAATA < SRR4302543.6738005/94‑1 (MQ=60)
GCTGATTATAGCTGGCCGTGGACGTGGGTGGTTTCCGACTCTTACCG‑‑‑CCAGGCGGTTAATGCCTTCTATAAAACCACCTTCAAGACGGCCAATA > SRR4302543.2433326/1‑94 (MQ=60)
GCTGATTATAGCTGGCCGTGGACGTGGGTGGTTTCCGACTCTTACCG‑‑‑CCAGGCGGTTAATGCCTTCTATAAAACCACCTTCAAGACGGCCAATA < SRR4302543.478567/94‑1 (MQ=60)
GCTGATTATAGCTGGCCGTGGACGTGGGTGGTTTCCGACTCTTACCG‑‑‑CCAGGCGGTTAATGCCTTCTATAAAACCACCTTCAAGACGGCCAATA > SRR4302543.720405/1‑94 (MQ=60)
CTGATTATAGCTGGCCGTGGACGTGGGTGGTTTCCGACTCTTACCG‑‑‑CCAGGCGGTTAATGCCTTCTATAAAACCACCTTCAAGACGGCCAATAA < SRR4302543.1997898/94‑1 (MQ=60)
CTGATTATAGCTGGCCGTGGACGTGGGTGGTTTCCGACTCTTACCG‑‑‑CCAGGCGGTTAATGCCTTCTATAAAACCACCTTCAAGACGGCCAATAA > SRR4302543.4267229/1‑94 (MQ=60)
CTGATTATAGCTGGCCGTGGACGTGGGTGGTTTCCGACTCTTACCG‑‑‑CCAGGCGGTTAATGCCTTCTATAAAACCACCTTCAAGACGGCCAATAA > SRR4302543.4267230/1‑94 (MQ=60)
TGATTATAGCTGGCCGTGGACGTGGGTGGTTTCCGACTCTTACCG‑‑‑CCAGGCGGTTAATGCCTTCTATAAAACCACCTTCAAGACGGCCAATAAT > SRR4302543.293165/1‑94 (MQ=60)
GATTATAGCTGGCCGTGGACGTGGGTGGTTTCCGACTCTTACCG‑‑‑CCAGGCGGTTAATGCCTTCTATAAAACCACCTTCAAGACGGCCAATAATC < SRR4302543.94406/94‑1 (MQ=60)
GATTATAGCTGGCCGTGGACGTGGGTGGTTTCCGACTCTTACCG‑‑‑CCAGGCGGTTAATGCCTTCTATAAAACCACCTTCAAGACGGCCAATAATC > SRR4302543.3681817/1‑94 (MQ=60)
ATTATAGCTGGCCGTGGACGTGGGTGGTTTCCGACTCTTACCG‑‑‑CCAGGCGGTTAATGCCTTCTATAAAACCACCTTCAAGACGGCCAATAATCC < SRR4302543.5136449/94‑1 (MQ=60)
ATTATAGCTGGCCGTGGACGTGGGTGGTTTCCGACTCTTACCG‑‑‑CCAGGCGGTTAATGCCTTCTATAAAACCACCTTCAAGACGGCCAATAATCC < SRR4302543.6319140/94‑1 (MQ=60)
ATTATAGCTGGCCGTGGACGTGGGTGGTTTCCGACTCTTACCG‑‑‑CCAGGCGGTTAATGCCTTCTATAAAACCACCTTCAAGACGGCCAATAATCC < SRR4302543.1705753/94‑1 (MQ=60)
ATTATAGCTGGCCGTGGACGTGGGTGGTTTCCGACTCTTACCG‑‑‑CCAGGCGGTTAATGCCTTCTATAAAACCACCTTCAAGACGGCCAATAATCC < SRR4302543.562004/94‑1 (MQ=60)
ATTATAGCTGGCCGTGGACGTGGGTGGTTTCCGACTCTTACCG‑‑‑CCAGGCGGTTAATGCCTTCTATAAAACCACCTTCAAGACGGCCAATAATCC > SRR4302543.5356204/1‑94 (MQ=60)
ATTATAGCTGGCCGTGGACGTGGGTGGTTTCCGACTCTTACCG‑‑‑CCAGGCGGCTAATGCCTTCTATAAAACCACCTTCAAGACGGCCAATAATCC > SRR4302543.3454948/1‑94 (MQ=60)
TTATAGCTGGCCGTGGACGTGGGTGGTTTCCGACTCTTACCG‑‑‑CCAGGCGGTTAATGCCTTCTATAAAACCACCTTCAAGACGGCCAATAATCCC < SRR4302543.3611984/94‑1 (MQ=60)
TATAGCTGGCCGTGGACGTGGGTGGTTTCCGACTCTTACCG‑‑‑CCAGGCGGTTAATGCCTTCTATAAAACCACCTTCAAGACGGCCAATAATCCCG > SRR4302543.7425884/1‑94 (MQ=60)
TATAGCTGGCCGTGGACGTGGGTGGTTTCCGACTCTTACCG‑‑‑CCAGGCGGTTAATGCCTTCTATAAAACCACCTTCAAGACGGCCAATAATCCCG > SRR4302543.6666660/1‑94 (MQ=60)
TAGCTGGCCGTGGACGTGGGTGGTCTCCGACTCTTACCG‑‑‑CCAGGCGGTTAATGCCTTCTATAAAACCACCTTCAAGACGGCCAATAATCCCGAT < SRR4302543.3956352/94‑1 (MQ=60)
AGGTGGCCGTGGGCGTGGGTGTTTTCCGACTCTTACCG‑‑‑CCAGGCGGTTAATGCCGTCTATAAAACCCCCTTCAAGACGGCCAATAATCCCGATG < SRR4302543.1789391/94‑1 (MQ=60)
AGCTGGCCGTGGACGTGGGTGGTTTCCGACTCTTACCG‑‑‑CCAGGCGGTTAATGCCTTCTATAAAACCACCTTCAAGACGGCCAATAATCCCGATG < SRR4302543.127182/94‑1 (MQ=60)
AGCTGGCCGTGGACGTGGGTGGTTTCCGACTCTTACCG‑‑‑CCAGGCGGTTAATGCCTTCTATAAAACCACCTTCAAGACGGCCAATAATCCCGATG > SRR4302543.6646341/1‑94 (MQ=60)
AGCTGGCCGTGGACGTGGGTGGTTTCCGACTCTTACCG‑‑‑CCAGGCGGTTAATGCCTTCTATAAAACCACCTTCAAGACGGCCAATAATCCCGATG < SRR4302543.1789392/94‑1 (MQ=60)
GCTGGCCGTGGACGTGGGTGGTTTCCGACTCTTACCG‑‑‑CCAGGCGGTTAATGCCTTCTATAAAACCACCTTCAAGACGGCCAATAATCCCGATGA < SRR4302543.4937163/94‑1 (MQ=60)
GCTGGCCGTGGACGTGGGTGGTTTCCGACTCTTACCG‑‑‑CCAGGCGGTTAATGCCTTCTATAAAACCACCTTCAAGACGGCCAATAATCCCGATGA < SRR4302543.3859051/94‑1 (MQ=60)
GCTGGCCGTGGACGTGGGTGGTTTCCGACTCTTACCG‑‑‑CCAGGCGGTTAATGCCTTCTATAAAACCACCTTCAAGACGGCCAATAATCCCGATGA > SRR4302543.3528948/1‑94 (MQ=60)
CTGGCCGTGGACGTGGGTGGTTTCCGACTCTTACCG‑‑‑CCAGGCGGTTAATGCCTTCTATAAAACCACCTTCAAGACGGCCAATAATCCCGATGAA > SRR4302543.7152050/1‑94 (MQ=60)
CTGGCCGTGGACGTGGGTGGTTTCCGACTCTTACCG‑‑‑CCAGGCGGTTAATGCCTTCTATAAAACCACCTTCAAGACGGCCAATAATCCCGATGAA < SRR4302543.688713/94‑1 (MQ=60)
TGGCTGTGGACGTGGGTGGTTTCCGACTCTTACCG‑‑‑CCAGGCGGTTAATGCCTTCTATAAAACCACCTTCAAGACGGCCAATAATCCCGATGAAG < SRR4302543.7359178/94‑1 (MQ=60)
GGCCGTGGACGTGGGTGGTTTCCGACTCTTACCG‑‑‑CCAGGCGGTTAATGCCTTCTATAAAACCACCTTCAAGACGGCCAATAATCCCGATGAAGA < SRR4302543.7719186/94‑1 (MQ=60)
GGCCGTGGACGTGGGTGGTTTCCGACTCTTACCG‑‑‑CCAGGCGGTTAATGCCTTCTATAAAACCACCTTCAAGACGGCCAATAATCCCGATGAAGA > SRR4302543.7004873/1‑94 (MQ=60)
GCCGTGGACGTGGGTGGTTTCCGACTCTTACCG‑‑‑CCAGGCGGTTAATGCCTTCTATAAAACCACCTTCAAGACGGCCAATAATCCCGATGAAGGT > SRR4302543.6267311/1‑94 (MQ=60)
GCCGTGGACGTGGGTGGTTTCCGACTCTTACCG‑‑‑CCAGGCGGTTAATGCCTTCTATAAAACCACCTTCAAGACGGCCAATAATCCCGATGAAGAT < SRR4302543.4075334/94‑1 (MQ=60)
CGTGGACGTGGGTGGTTTCCGACTCTTACCG‑‑‑CCAGGCGGTTAATGCCTTCTATAAAACCACCTTCAAGACGGCCAATAATCCCGATGAAGATAT < SRR4302543.641948/94‑1 (MQ=60)
CGTGGACGTGGGTGGTTTCCGACTCTTACCG‑‑‑CCAGGCGGTTAATGCCTTCTATAAAACCACCTTCAAGACGGCCAATAATCCCGATGAAGATAT < SRR4302543.3813397/94‑1 (MQ=60)
CGTGGACGTGGGTGGTTTCCGACTCTTACCG‑‑‑CCAGGCGGTTAATGCCTTCTATAAAACCACCTTCAAGACGGCCAATAATCCCGATGAAGATAT > SRR4302543.4243314/1‑94 (MQ=60)
GTGGACGTGGGTGGTTTCCGACTCTTACCG‑‑‑CCAGGCGGTTAATGCCTTCTATAAAACCACCTTCAAGACGGCCAATAATCCCGATGAAGATATG < SRR4302543.5987216/94‑1 (MQ=60)
GTGGACGTGGGTGGTTTCCGACTCTTACCG‑‑‑CCAGGCGGTTAATGCCTTCTATAAAACCACCTTCAAGACGGCCAATAATCCCGATGAAGATATG < SRR4302543.1307593/94‑1 (MQ=60)
GGACGTGGGTGGTTTCCGACTCTTACCG‑‑‑CCAGGCGGTTAATGCCTTCTATAAAACCACCTTCAAGACGGCCAATAATCCCGATGAAGATATGCA < SRR4302543.3201767/94‑1 (MQ=60)
GACGTGGGTGGTTTCCAACTCTTACCG‑‑‑CCAGGCGGTTAATGCCTTCTATAAAACCACCTTCAAGACGGCCAATAATCCCGATGAAGATATGCAA < SRR4302543.2484453/94‑1 (MQ=60)
ACGTGGGTGGTTTCCGACTCTTACCG‑‑‑CCAGGCGGTTAATGCCTTCTATAAAACCACCTTCAAGACGGCCAATAATCCCGATGATGATATGCAAA > SRR4302543.4891457/1‑94 (MQ=60)
ACGTGGGTGGTTTCCGACTCTTACCG‑‑‑CCAGGCGGTTAATGCCTTCTATAAAACCACCTTCAAGACGGCCAATAATCCCGATGAAGATATGCAAA > SRR4302543.7283205/1‑94 (MQ=60)
ACGTGGGTGGTTTCCGACTCTTACCG‑‑‑CCAGGCGGTTAATGCCTTCTATAAAACCACCTTCAAGACGGCCAATAATCCCGATGAAGATATGCAAA < SRR4302543.5003589/94‑1 (MQ=60)
CGTGGGTGGTTTCCGACTCTTACCG‑‑‑CCAGGCGGTTAATGCCTTCTATAAAACCACCTTCAAGACGGCCAATAATCCCGATGAAGATATGCAAAT < SRR4302543.7726807/94‑1 (MQ=60)
CGTGGGTGGTTTCCGACTCTTACCG‑‑‑CCAGGCGGTTAATGCCTTCTATAAAACCACCTTCAAGACGGCCAATAATCCCGATGAAGATATGCAAAT < SRR4302543.6248269/94‑1 (MQ=60)
GTGGGTGGTTTCCGACTCTTACCG‑‑‑CCAGGCGGTTAATGCCTTCTATAAAACCACCTTCAAGACGGCCAATAATCCCGATGCAGATATGCAAATA > SRR4302543.178576/1‑94 (MQ=60)
GTGGGTGGTTTCCGACTCTTACCG‑‑‑CCAGGCGGTTAATGCCTTCTATAAAACCACCTTCAAGACGGCCAATAATCCCGATGAAGATATGCAAATA > SRR4302543.5379421/1‑94 (MQ=60)
GTGGGTGGTTTCCGACTCTTACCG‑‑‑CCAGGCGGTTAATGCCTTCTATAAAACCACCTTCAAGACGGCCAATAATCCCGATGAAGATATGCAAATA > SRR4302543.363891/1‑94 (MQ=60)
TGGGTGGTTTCCGACTCTTACCG‑‑‑CCAGGCGGTTAATGCCTTCTATAAAACCACCTTCAAGACGGCCAATAATCCCGATGAAGATATGCAAATAG < SRR4302543.1952055/94‑1 (MQ=60)
ggggtGTTTCCGACTCTTACCG‑‑‑CCAGGCGGTTAATGCCTTCTATAAAACCACCTTCAAGACGGCCAATAATCCCGATGAAGATATGCAAATAGA < SRR4302543.3993552/89‑1 (MQ=60)
GGGTGGTTTCCGACTCTTACCG‑‑‑CCAGGCGGTTAATGCCTTCTATAAAACCACCTTCAAGACGGCCAATAATCCCGATGAAGATATGCAAATAGA < SRR4302543.4181384/94‑1 (MQ=60)
GGGTGGTTTCCGACTCTTACCG‑‑‑CCAGGCGGTTAATGCCTTCTATAAAACCACCTTCAAGACGGCCAATAATCCCGATGAAGATATGCAAATAGA < SRR4302543.3993554/94‑1 (MQ=60)
GGGTGGTTTCCGACTCTTACCG‑‑‑CCAGGCGGTTAATGCCTTCTATAAAACCACCTTCAAGACGGCCAATAATCCCGATGAAGATATGCAAATAGA > SRR4302543.5051343/1‑94 (MQ=60)
GGGTGGTTTCCGACTCTTACCG‑‑‑CCAGGCGGTTAATGCCTTCTATAAAACCACCTTCAAGACGGCCAATAATCCCGATGAAGATATGCAAATAGA < SRR4302543.5279508/94‑1 (MQ=60)
GGTGGTTTCCGACTCTTACCG‑‑‑CCAGGCGGTTAATGCCTTCTATAAAACCACCTTCAAGACGGCCAATAATCCCGATGAAGATATGCAAATAGAA < SRR4302543.7629785/94‑1 (MQ=60)
GGTGGTTTCCGACTCTTACCG‑‑‑CCAGGCGGTTAATGCCTTCTATAAAACCACCTTCAAGACGGCCAATAATCCCGATGAAGATATGCAAATAGAA < SRR4302543.7629784/94‑1 (MQ=60)
GTGGTTTCCGACTCTTACCG‑‑‑CCAGGCGGTTAATGCCTTCTATAAAACCACCTTCAAGACGGCCAATAATCCCGATGAAGATATGCAAATAGAAC > SRR4302543.1828800/1‑94 (MQ=60)
TGGTTTCCGACTCTTACCG‑‑‑CCAGGCGGTTAATGCCTTCTATAAAACCACCTTCAAGACGGCCAATAATCCCGATGAAGATATGCAAATAGAACG < SRR4302543.2267119/94‑1 (MQ=60)
TGGTTTCCGACTCTTACCG‑‑‑CCAGGCGGTTAATGCCTTCTATAAAACCACCTTCAAGACGGCCAATAATCCCGATGAAGATATGCAAATAGAACG > SRR4302543.2035197/1‑94 (MQ=60)
GTTTCCGCCTCTTACCG‑‑‑CCAGGCGGTTAATGCCTTCTATAAAACCACCTTCAAGACGGCCAATAATCCCGATGAAGATATGCAAATAGAACGGC < SRR4302543.5873419/94‑1 (MQ=60)
GTTTCCGACTCTTACCG‑‑‑CCAGGCGGTTAATGCCTTCTATAAAACCACCTTCAAGACGGCCAATAATCCCGATGAATATATGCAAATAGAACGGC < SRR4302543.5138413/94‑1 (MQ=60)
GTTTCCGACTCTTACCG‑‑‑CCAGGCGGTTAATGCCTTCTATAAAACCACCTTCAAGACGGCCAATAATCCCGATGAAGATATGCAAATAGAACGGC > SRR4302543.4528/1‑94 (MQ=60)
TTCCGACTCTTACCG‑‑‑CCAGGCGGTTAATGCCTTCTATAAAACCACCTTCAAGACGGCCAATAATCCCGATGAAGATATGCAAATAGAACGGCAA < SRR4302543.1453795/94‑1 (MQ=60)
TTCCGACTCTTACCG‑‑‑CCAGGCGGTTAATGCCTTCTATAAAACCACCTTCAAGACGGCCAATAATCCCGATGAAGATATGCAAATAGAACGGCAA > SRR4302543.154451/1‑94 (MQ=60)
TCCGACTCTTACCG‑‑‑CCAGGCGGTTAATGCCTTCTATAAAACCACCTTCAAGACGGCCAATAATCCCGATGAAGATATGCAAATAGAACGGCAAT < SRR4302543.32409/94‑1 (MQ=60)
CCGACTCTTACCG‑‑‑CCAGGCGGTTAATGCCTTCTATAAAACCACCTTCAAGACGGCCAATAATCCCGATGAAGATATGCAAATAGAACGGCAATT > SRR4302543.3236896/1‑94 (MQ=60)
CCGACTCTTACCG‑‑‑CCAGGCGGTTAATGCCTTCTATAAAACCACCTTCAAGACGGCCAATAATCCCGATGAAGATATGCAAATAGAACGGCAATT > SRR4302543.8003478/1‑94 (MQ=60)
CCGACTCTTACCG‑‑‑CCAGGCGGTTAATGCCTTCTATAAAACCACCTTCAAGACGGCCAATAATCCCGATGAAGATATGCAAATAGAACGGCAATT < SRR4302543.5529210/94‑1 (MQ=60)
CGACTCTTACCG‑‑‑CCAGGCGGTTAATGCCTTCTATAAAACCACCTTCAAGACGGCCAATAATCCCGATGAAGATATGCAAATAGAACGGCAATTT > SRR4302543.5407140/1‑94 (MQ=60)
CGACTCTTACCG‑‑‑CCAGGCGGTTAATGCCTTCTATAAAACCACCTTCAAGACGGCCAATAATCCCGATGAAGATATGCAAATAGAACGGCAATTT < SRR4302543.164917/94‑1 (MQ=60)
GACTCTTACCG‑‑‑CCAGGCGGTTAATGCCTTCTATAAAACCACCTTCAAGACGGCCAATAATCCCGATGAAGATATGCAAATAGAACGGCAATTTA > SRR4302543.6123532/1‑94 (MQ=60)
CTCTTACCG‑‑‑CCAGGCGGTTAATGCCTTCTATAAAACCACCTTCAAGACGGCCAATAATCCCGATGAAGATATGCAAATAGAACGGCAATTTATT < SRR4302543.3343173/94‑1 (MQ=60)
CTCTTACCG‑‑‑CCAGGCGGTTAATGCCTTCTATAAAACCACCTTCAAGACGGCCAATAATCCCGATGAAGATATGCAAATAGAACGGCAATTTATT > SRR4302543.5200936/1‑94 (MQ=60)
CTCTTACCG‑‑‑CCAGGCGGTTAATGCCTTCTATAAAACCACCTTCAAGACGGCCAATAATCCCGATGAAGATATGCAAATAGAACGGCAATTTATT < SRR4302543.512206/94‑1 (MQ=60)
CTCTTACCG‑‑‑CCAGGCGGTTAATGCCTTCTATAAAACCACCTTCAAGACGGCCAATAATCCCGATGAAGATATGCAAATAGAACGGCAATTTATT > SRR4302543.618015/1‑94 (MQ=60)
TCTTACCG‑‑‑CCAGGCGGTTAATGCCTTCTATAAAACCACCTTCAAGACGGCCAATAATCCCGATGAAGATATGCAAATAGAACGGCAATTTATTT < SRR4302543.5569603/94‑1 (MQ=60)
TTACCG‑‑‑CCAGGCGGTTAATGCCTTCTATAAAACCACCTTCAAGACGGCCAATAATCCCGATGAAGATATGCAAATAGAACGGCAATTTATTTAC < SRR4302543.7262331/94‑1 (MQ=60)
TTACCG‑‑‑CCAGGCGGTTAATGCCTTCTATAAAACCACCTTCAAGACGGCCAATAATCCCGATGAAGATATGCAAATAGAACGGCAATTTATTTAC < SRR4302543.4377936/94‑1 (MQ=60)
cttaccgCCAGGCGGTTAATGCCTTCTATAAAACCACCTTCAAGACGGCCAATAATCCCGATGAAGATATGCAAATAGAACGGCAATTTATTTA > SRR4302543.4635773/8‑94 (MQ=60)
cttaccgCCAGGCGGTTAATGCCTTCTATAAAACCACCTTCAAGACGGCCAATAATCCCGATGAAGATATGCAAATAGAACGGCAATTTATTTA > SRR4302543.6608147/8‑94 (MQ=60)
accgCCAGGCGGTTAATGCCTTCTATAAAACCACCTTCAAGACGGCCAATAATCCCGATGAAGGTATGCAAATAGAACGGCAATTTATTTACGA < SRR4302543.7112033/90‑1 (MQ=60)
accgCCAGGCGGTTAATGCCTTCTATAAAACCACCTTCAAGACGGCCAATAATCCCGATGAAGATATGCAAATAGCACGGCAATATATTTACGA > SRR4302543.5241990/5‑94 (MQ=60)
accgCCAGGCGGTTAATGCCTTCTATAAAACCACCTTCAAGACGGCCAATAATCCCGATGAAGATATGCAAATAGAACGGCAATTTATTTACGA < SRR4302543.5209733/90‑1 (MQ=60)
CCGCCAGGCGGTTAATGCCTTCTATAAAACCACCTTCAAGACGGCCAATAATCCCGATGAAGATATGCAAATAGAACGGCAATTTATTTACGAC < SRR4302543.1171197/94‑1 (MQ=60)
CCGCCAGGCGGTTAATGCCTTCTATAAAACCACCTTCAAGACGGCCAATAATCCCGATGAAGATATGCAAATAGAACGGCAATTTATTTACGAC < SRR4302543.2005496/94‑1 (MQ=60)
CGCCAGGCGGTTAATGCCTTCTATAAAACCACCTTCAAGACGGCCAATAATCCCGATGAAGATATGCAAATAGAACGGCAATTTATTTACGACA < SRR4302543.5691901/94‑1 (MQ=60)
GCCAGGCGGTTAATGCCTTCTATAAAACCACCTTCAAGACGGCCAATAATCCCGATGAAGATATGCAAATAGAACGGCAATTTATTTACGACAA < SRR4302543.7191886/94‑1 (MQ=60)
CCAGGCGGTTAATGCCTTCTATAAAACCACCTTCAAGACGGCCAATAATCCCGATGAAGATATGCAAATAGAACGGCAATTTATTTACGACAAT > SRR4302543.7734771/1‑94 (MQ=60)
CCAGGCGGTTAATGCCTTCTATAAAACCACCTTCAAGACGGCCAATAATCCCGATGAAGATATGCAAATAGAACGGCAATTTATTTACGACAAT > SRR4302543.5102535/1‑94 (MQ=60)
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AGAACAGCCGGAAGCCTTTGTTGCCGAACTCTTTGAACATATTGCTGATTATAGCTGGCCGTGGACGTGGGTGGTTTCCGACTCTTACCGCCACCAGGCGGTTAATGCCTTCTATAAAACCACCTTCAAGACGGCCAATAATCCCGATGAAGATATGCAAATAGAACGGCAATTTATTTACGACAAT > NC_000913/3156164‑3156350
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| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 7 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
