Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
1873 |
183.1 |
9376148 |
98.2% |
9207377 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| MC JC |
NC_000913 |
3,156,257 |
(CCA)2→1 |
coding (594‑596/930 nt) |
yqhG → |
hypothetical protein |
|
| | | | seq id |
start |
end |
size |
←reads |
reads→ |
gene |
description |
|---|
| * |
* |
÷ |
NC_000913 |
3156257 |
3156259 |
3 |
208 [0] |
[0] 209 |
yqhG |
hypothetical protein |
|
| |
seq id |
position |
reads (cov) |
reads (cov) |
score |
skew |
freq |
annotation |
gene |
product |
| * |
? |
NC_000913 |
= 3156256 | 0 (0.000) | 201 (1.140) |
111/178 |
0.1 |
100% |
coding (593/930 nt) |
yqhG |
hypothetical protein |
| ? | NC_000913 |
3156260 = |
0 (0.000) | coding (597/930 nt) |
yqhG |
hypothetical protein |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
AGCCGGAAGCCTTTGTTGCCGAACTCTTTGAACATATTGCTGATTATAGCTGGCCGTGGACGTGGGTGGTTTCCGACTCTTACCGCCACCAGGCGGTTAATGCCTTCTATAAAACCACCTTCAAGACGGCCAATAATCCCGATGAAGATATGCAAATAGAACGGCAATTTATTTACGACAAT > NC_000913/3156169‑3156350
|
AGCCGGAAGCCTTTGTTGCCGAACTCTTTGAACATATTGCTGATTATAGCTGGCCGTGGACGTGGGTGGTTTCCGACTCTTACCG‑‑‑CCAGGCGGT > SRR4302535.1862913/1‑94 (MQ=60)
CCGGAAGCCTTTGTTGCCGAACTCTTTGAACATATTGCTGATTATAGCTGGCCGTGGACGTGGGTGGTTTCCGACTCTTACCG‑‑‑CCAGGCGGTTA > SRR4302535.2352546/1‑94 (MQ=60)
CCGGAAGCCTTTGTTGCCGAACTCTTTGAACATATTGCTGATTATAGCTGGCCGTGGACGTGGGTGGTTTCCGACTCTTACCG‑‑‑CCAGGCGGTTA < SRR4302535.1389408/94‑1 (MQ=60)
CCGGAAGCCTTTGTTGCCGAACTCTTTGAACATATTGCTGATTATAGCTGGCCGTGGACGTGGGTGGTTTCCGACTCTTACCG‑‑‑CCAGGCGGTTA > SRR4302535.4642103/1‑94 (MQ=60)
GAAGCCTTTGTTGCCGAACTCTTTGAACATATTGCTGATTATAGCTGGCCGTGGACGTGGGTGGTTTCCGACTCTTACCG‑‑‑CCAGGCGGTTAATG < SRR4302535.993239/94‑1 (MQ=60)
GAAGCCTTTGTTGCCGAACTCTTTGAACATATTGCTGATTATAGCTGGCCGTGGACGTGGGTGGTTTCCGACTCTTACCG‑‑‑CCAGGCGGTTAATG < SRR4302535.1612304/94‑1 (MQ=60)
AAGCCTTTGTTGCCGAACTCTTTGAACATATTGCTGATTATAGCTGGCCGTGGACGTGGGTGGTTTCCGACTCTTACCG‑‑‑CCAGGCGGTTAATGC > SRR4302535.371543/1‑94 (MQ=60)
GCCTTTGTTGCCGAACTCTTTGAACATATTGCTGATTATAGCTGGCCGTGGACGTGGGTGGTTTCCGACTCTTACCG‑‑‑CCAGGCGGTTAATGCCT < SRR4302535.4597832/94‑1 (MQ=60)
CCTTTGTTGCCGAACTCTTTGAACATATTGCTGATTATAGCTGGCCGTGGACGTGGGTGGTTTCCGACTCTTACCG‑‑‑CCAGGCGGTTAATGCCTT > SRR4302535.3039992/1‑94 (MQ=60)
CCTTTGTTGCCGAACTCTTTGAACATATTGCTGATTATAGCTGGCCGTGGACGTGGGTGGTTTCCGACTCTTACCG‑‑‑CCAGGCGGTTAATGCCTT > SRR4302535.532228/1‑94 (MQ=60)
CCTTTGTTGCCGAACTCTTTGAACATATTGCTGATTATAGCTGGCCGTGGACGTGGGTGGTTTCCGACTCTTACCG‑‑‑CCAGGCGGTTAATGCCTT > SRR4302535.1628891/1‑94 (MQ=60)
CTTTGTTGCCGAACTCTTTGAACATATTGCTGATTATAGCTGGCCGTGGACGTGGGTGGTTTCCGACTCTTACCG‑‑‑CCAGGCGGTTAATGCCTTC > SRR4302535.2862663/1‑94 (MQ=60)
CTTTGTTGCCGAACTCTTTGAACATATTGCTGATTATAGCTGGCCGTGGACGTGGGTGGTTTCCGACTCTTACCG‑‑‑CCAGGCGGTTAATGCCTTC < SRR4302535.854595/94‑1 (MQ=60)
TTTGTTGCCGAACTCTTTGAACATATTGCTGATTATAGCTGGCCGTGGACGTGGGTGGTTTCCGACTCTTACCG‑‑‑CCAGGCGGTTAATGCCTTCT < SRR4302535.461854/94‑1 (MQ=60)
TTGTTGCCGAACTCTTTGAACATATTGCTGATTATAGCTGGCCGTGGACGTGGGTGGTTTCCGACTCTTACCG‑‑‑CCAGGCGGTTAATGCCTTCTA > SRR4302535.754603/1‑94 (MQ=60)
TGTTGCCGAACTCTTTGAACATATTGCTGATTATAGCTGGCCGTGGACGTGGGTGGTTTCCGACTCTTACCG‑‑‑CCAGGCGGTTAATGCCTTCTAT < SRR4302535.246430/94‑1 (MQ=60)
GTTGCCGAACTCTTTGAACATATTGCTGATTATAGCTGGCCGTGGACGTGGGTGGTTTCCGACTCTTACCG‑‑‑CCAGGCGGTTAATGCCTTCTATA < SRR4302535.488159/94‑1 (MQ=60)
GTTGCCGAACTCTTTGAACATATTGCTGATTATAGCTGGCCGTGGACGTGGGTGGTTTCCGACTCTTACCG‑‑‑CCAGGCGGTTAATGCCTTCTATA < SRR4302535.2764198/94‑1 (MQ=60)
CCGAACTCTTTGAACATATTGCTGATTATAGCTGGCCGTGGACGTGGGTGGTTTCCGACTCTTACCG‑‑‑CCAGGCGGTTAATGCCTTCTATAAAAC > SRR4302535.1532675/1‑94 (MQ=60)
CGAACTCTTTGAACATATTGCTGATTATAGCTGGCCGTGGACGTGGGTGGTTTCCGACTCTTACCG‑‑‑CCAGGCGGTTAATGCCTTCTATAAAACC > SRR4302535.357241/1‑94 (MQ=60)
GATCTCTTTGAACATATTGCTGATTATAGCTGGCCGTGGACGTGGGTGGTTTCCGACTCTTACCG‑‑‑CCAGGCGGTTAATGCCTTCTATAAAACCA < SRR4302535.3877819/94‑1 (MQ=60)
AACTCTTTGAACATATTGCTGATTATAGCTGGCCGTGGACGTGGGTGGTTTCCGACTCTTACCG‑‑‑CCAGGCGGTTAATGCCTTCTATAAAACCAC > SRR4302535.1906270/1‑94 (MQ=60)
ACTCTTTGAACATATTGCTGATTATAGCTGGCCGTGGACGTGGGTGGTTTCCGACTCTTACCG‑‑‑CCAGGCGGTTAATGCCTTCTATAAAACCACC > SRR4302535.909912/1‑94 (MQ=60)
TCTTTGAACATATTGCTGATTATAGCTGGCCGTGGACGTGGGTGGTTTCCGACTCTTACCG‑‑‑CCAGGCGGTTAATGCCTTCTATAAAACCACCTT < SRR4302535.4716782/94‑1 (MQ=60)
TCTTTGAACATATTGCTGATTATAGCTGGCCGTGGACGTGGGTGGTTTCCGACTCTTACCG‑‑‑CCAGGCGGTTAATGCCTTCTATAAAACCACCTT > SRR4302535.1289675/1‑94 (MQ=60)
TCTTTGAACATATTGCTGATTATAGCTGGCCGTGGACGTGGGTGGTTTCCGACTCTTACCG‑‑‑CCAGGCGGTTAATGCCTTCTATAAAACCACCTT > SRR4302535.1283770/1‑94 (MQ=60)
TTGAACATATTGCTGATTATAGCTGGCCGTGGACGTGGGTGGTTTCCGACTCTTACCG‑‑‑CCAGGCGGTTAATGCCTTCTATAAAACCACCTTCAA > SRR4302535.1358016/1‑94 (MQ=60)
TGAACATATTGCTGATTATAGCTGGCCGTGGACGTGGGTGGTTTCCGACTCTTACCG‑‑‑CCAGGCGGTTAATGCCTTCTATAAAACCACCTTCAAG > SRR4302535.1182520/1‑94 (MQ=60)
TGAACATATTGCTGATTATAGCTGGCCGTGGACGTGGGTGGTTTCCGACTCTTACCG‑‑‑CCAGGCGGTTAATGCCTTCTATAAAACCACCTTCAAG < SRR4302535.2504992/94‑1 (MQ=60)
GAACATATTGCTGATTATAGCTGGCCGTGGACGTGGGTGGTTTCCGACTCTTACCG‑‑‑CCAGGCGGTTAATGCCTTCTATAAAACCACCTTCAAGA > SRR4302535.2521036/1‑94 (MQ=60)
AACATATTGCTGATTATAGCTGGCCGTGGACGTGGGTGGTTTCCGACTCTTACCG‑‑‑CCAGGCGGTTAATGCCTTCTATAAAACCACCTTCAAGAC < SRR4302535.4014901/94‑1 (MQ=60)
AACATATTGCTGATTATAGCTGGCCGTGGACGTGGGTGGTTTCCGACTCTTACCG‑‑‑CCAGGCGGTTAATGCCTTCTATAAAACCACCTTCAAGAC > SRR4302535.1802696/1‑94 (MQ=60)
ACATATTGCTGATTATAGCTGGCCGTGGACGTGGGTGGTTTCCGACTCTTACCG‑‑‑CCAGGCGGTTAATGCCTTCTATAAAACCACCTTCAAGACG < SRR4302535.1670711/94‑1 (MQ=60)
ACATATTGCTGATTATAGCTGGCCGTGGACGTGGGTGGTTTCCGACTCTTACCG‑‑‑CCAGGCGGTTAATGCCTTCTATAAAACCACCTTCAAGACG < SRR4302535.4296443/94‑1 (MQ=60)
ACATATTGCTGATTATAGCTGGCCGTGGACGTGGGTGGTTTCCGACTCTTACCG‑‑‑CCAGGCGGTTAATGCCTTCTATAAAACCACCTTCAAGACG < SRR4302535.2625648/94‑1 (MQ=60)
ACATATTGCTGATTATAGCTGGCCGTGGACGTGGGTGGTTTCCGACTCTTACCG‑‑‑CCAGGCGGTTAATGCCTTCTATAAAACCACCTTCAAGACG < SRR4302535.4048567/94‑1 (MQ=60)
CATATTGCTGATTATAGCTGGCCGTGGACGTGGGTGGTTTCCGACTCTTACCG‑‑‑CCAGGCGGTTAATGCCTTCTATAAAACCACCTTCAAGACGC > SRR4302535.3520171/1‑94 (MQ=60)
ATTGCTGATTATAGCTGGCCGTGGACGTGGGTGGTTTCCGACTCTTACCG‑‑‑CCAGGCGGTTAATGCCTTCTATAAAACCACCTTCAAGACGGCCA > SRR4302535.1671819/1‑94 (MQ=60)
TGCTGATTATAGCTGGCCGTGGACGTGGGTGGTTTCCGACTCTTACCG‑‑‑CCAGGCGGTTAATGCCTTCTATAAAACCACCTTCAAGACGGCCAAT < SRR4302535.3271922/94‑1 (MQ=60)
GCTGATTATAGCTGGCCGTGGACGTGGGTGGTTTCCGACTCTTACCG‑‑‑CCAGGCGGTTAATGCCTTCTATAAAACCACCTTCAAGACGGCCAATA < SRR4302535.4266058/94‑1 (MQ=60)
GCTGATTATAGCTGGCCGTGGACGTGGGTGGTTTCCGACTCTTACCG‑‑‑CCAGGCGGTTAATGCCTTCTATAAAACCACCTTCAAGACGGCCAATA > SRR4302535.4496976/1‑94 (MQ=60)
CTGATTATAGCTGGCCGTGGACGTGGGTGGTTTCCGACTCTTACCG‑‑‑CCAGGCGGTTAATGCCTTCTATAAAACCACCTTCAAGACGGCCAATAA > SRR4302535.3375005/1‑94 (MQ=60)
CTGATTATAGCTGGCCGTGGACGTGGGTGGTTTCCGACTCTTACCG‑‑‑CCAGGCGGTTAATGCCTTCTATAAAACCACCTTCAAGACGGCCAATAA > SRR4302535.4260366/1‑94 (MQ=60)
CTGATTATAGCTGGCCGTGGACGTGGGTGGTTTCCGACTCTTACCG‑‑‑CCAGGCGGTTAATGCCTTCTATAAAACCACCTTCAAGACGGCCAATAA > SRR4302535.3441506/1‑94 (MQ=60)
TGATTATAGCTGGCCGTGGACGTGGGTGGTTTCCGACTCTTACCG‑‑‑CCAGGCGGTTAATGCCTTCTATAAAACCACCTTCAAGACGGCCAATAAT > SRR4302535.945390/1‑94 (MQ=60)
ATTATAGCTGGCCGTGGACGTGGGTGGTTTCCGACTCTTACCG‑‑‑CCAGGCGGTTAATGCCTTCTATAAAACCACCTTCAAGACGGCCAATAATCC > SRR4302535.3280962/1‑94 (MQ=60)
ATTATAGCTGGCCGTGGACGTGGGTGGTTTCCGACTCTTACCG‑‑‑CCAGGCGGTTAATGCCTTCTATAAAACCACCTTCAAGACGGCCAATAATCC > SRR4302535.2131548/1‑94 (MQ=60)
TTATAGCTGGCCGTGGACGTGGGTGGTTTCCGACTCTTACCG‑‑‑CCAGGCGGTTAATGCCTTCTATAAAACCACCTTCAAGACGGCCAATAATCCC < SRR4302535.872721/94‑1 (MQ=60)
TATAGCTGGCCGTGGACGTGGGTGGTTTCCGACTCTTACCG‑‑‑CCAGGCGGTTAATGCCTTCTATAAAACCACCTTCAAGACGGCCAATAATCCCG > SRR4302535.4246932/1‑94 (MQ=60)
TATAGCTGGCCGTGGACGTGGGTGGTTTCCGACTCTTACCG‑‑‑CCAGGCGGTTAATGCCTTCTATAAAACCACCTTCAAGACGGCCAATAATCCCG < SRR4302535.2465468/94‑1 (MQ=60)
ATAGCTGGCCGTGGACGTGGGTGGTTTCCGACTCTTACCG‑‑‑CCAGGCGGTTAATGCCTTCTATAAAACCACCTTCAAGACGGCCAATAATCCCGA > SRR4302535.2693070/1‑94 (MQ=60)
ATAGCTGGCCGTGGACGTGGGTGGTTTCCGACTCTTACCG‑‑‑CCAGGCGGTTAATGCCTTCTATAAAACCACCTTCAAGACGGCCAATAATCCCGA > SRR4302535.2056933/1‑94 (MQ=60)
TAGCTGGCCGTGGACGTGGGTGGTTTCCGACTCTTACCG‑‑‑CCAGGCGGTTAATGCCTTCTATAAAACCACCTTCAAGACGGCCAATAATCCCGAT > SRR4302535.3106914/1‑94 (MQ=60)
TAGCTGGCCGTGGACGTGGGTGGTTTCCGACTCTTACCG‑‑‑CCAGGCGGTTAATGCCTTCTATAAAACCACCTTCAAGACGGCCAATAATCCCGAT > SRR4302535.3106915/1‑94 (MQ=60)
TAGCTGGCCGTGGACGTGGGTGGTTTCCGACTCTTACCG‑‑‑CCAGGCGGTTAATGCCTTCTATAAAACCACCTTCAAGACGGCCAATAATCCCGAT > SRR4302535.2197703/1‑94 (MQ=60)
TAGCTGGCCGTGGACGTGGGTGGTTTCCGACTCTTACCG‑‑‑CCAGGCGGTTAATGCCTTCTATAAAACCACCTTCAAGACGGCCAATAATCCCGAT > SRR4302535.3603006/1‑94 (MQ=60)
AGCTGGCCGTGGACGTGGGTGGTTTCCGACTCTTACCG‑‑‑CCAGGCGGTTAATGCCTTCTATAAAACCACCTTCAAGACGGCCAATAATCCCGATG > SRR4302535.641311/1‑94 (MQ=60)
GCTGGCCGTGGACGTGGGTGGTTTCCGACTCTTACCG‑‑‑CCAGGCGGTTAATGCCTTCTATAAAACCACCTTCAAGACGGCCAATAATCCCGATGA < SRR4302535.53258/94‑1 (MQ=60)
CTGGCCGTGGACGTGGGTGGTTTCCGACTCTTACCG‑‑‑CCAGGCGGTTAATGCCTTCTATAAAACCACCTTCAAGACGGCCAATAATCCCGATGAA < SRR4302535.3291630/94‑1 (MQ=60)
TGGCCGTGGACGTGGGTGGTTTCCGACTCTTACCG‑‑‑CCAGGTGGTTAATGCCTTCTATAAAACCACCTTCAAGACGGCCAATAATCCCGATGAAG > SRR4302535.3412453/1‑94 (MQ=60)
TGGCCGTGGACGTGGGTGGTTTCCGACTCTTACCG‑‑‑CCAGGCGGTTAATGCCTTCTATAAAACCACCTTCAAGACGGCCAATAATCCCGATGAAG < SRR4302535.377997/94‑1 (MQ=60)
GGCCGTGGACGTGGGTGGTTTCCGACTCTTACCG‑‑‑CCAGGCGGTTAATGCCTTCTATAAAACCACCTTCAAGACGGCCAATAATCCCGATGAAGA > SRR4302535.2810426/1‑94 (MQ=60)
GCCGTGGACGTGGGTGGTTTCCGACTCTTACCG‑‑‑CCAGGCGGTTAATGCCTTCTATAAAACCACCTTCAAGACGGCCAATAATCCCGATGAAGAT < SRR4302535.1579461/94‑1 (MQ=60)
GCCGTGGACGTGGGTGGTTTCCGACTCTTACCG‑‑‑CCAGGCGGTTAATGCCTTCTATAAAACCACCTTCAAGACGGCCAATAATCCCGATGAAGAT < SRR4302535.2677850/94‑1 (MQ=60)
CGTGGACGTGGGTGGTTTCCGACTCTTACCG‑‑‑CCAGGCGGTTAATGCCTTCTATAAAACCACCTTTAAGACGGCCAATAATCCCGATGAAGATAT < SRR4302535.4435607/94‑1 (MQ=60)
CGTGGACGTGGGTGGTTTCCGACTCTTACCG‑‑‑CCAGGCGGTTAATGCCTTCTATAAAACCACCTTCAAGACGGCCAATAATCCCGATGAAGATAT < SRR4302535.445542/94‑1 (MQ=60)
GTGGACGTGGGTGGTTTCCGACTCTTACCG‑‑‑CCAGGCGGTTAATGCCTTCTATAAAACCACCTTCAAGACGGCCAATAATCCCGATGAAGATATG < SRR4302535.61230/94‑1 (MQ=60)
GTGGACGTGGGTGGTTTCCGACTCTTACCG‑‑‑CCAGGCGGTTAATGCCTTCTATAAAACCACCTTCAAGACGGCCAATAATCCCGATGAAGATATG < SRR4302535.4454848/94‑1 (MQ=60)
GGACGTGGGTGGTTTCCGACTCTTACCG‑‑‑CCAGGCGGTTAATGCCTTCTATAAAACCACCTTCAAGACGGCCAATAATCCCGATGAAGATATGCA > SRR4302535.3122581/1‑94 (MQ=60)
GGACGTGGGTGGTTTCCGACTCTTACCG‑‑‑CCAGGCGGTTAATGCCTTCTATAAAACCACCTTCAAGACGGCCAATAATCCCGATGAAGATATGCA < SRR4302535.682126/94‑1 (MQ=60)
GACGTGGGTGGTTTCCGACTCTTACCG‑‑‑CCAGGCGGTTAATGCCTTCTATAAAACCACCTTCAAGACGGCCAATAATCCCGATGAAGATATGCAA < SRR4302535.2482270/94‑1 (MQ=60)
CGTGGGTGGTTTCCGACTCTTACCG‑‑‑CCAGGCGGTTAATGCCTTCTATAAAACCACCTTCAAGACGGCCAATAATCCCGATGAAGATATGCAAAT > SRR4302535.1445902/1‑94 (MQ=60)
CGTGGGTGGTTTCCGACTCTTACCG‑‑‑CCAGGCGGTTAATGCCTTCTATAAAACCACCTTCAAGACGGCCAATAATCCCGATGAAGATATGCAAAT > SRR4302535.1440918/1‑94 (MQ=60)
CGTGGGTGGTTTCCGACTCTTACCG‑‑‑CCAGCCGGTTAATGCCTTCTATAAAACCCCCTTCAAGACGGCCAATAATCCCGATGAAGATATGCAAAT < SRR4302535.12898/94‑1 (MQ=60)
GTGGGTGGTTTCCGACTCTTACCG‑‑‑CCAGGCGGTTAATGCCTTCTATAAAACCACCTTCAAGACGGCCAATAATCCCGATGAAGATATGCAAATA > SRR4302535.256117/1‑94 (MQ=60)
GTGGGTGGTTTCCGACTCTTACCG‑‑‑CCAGGCGGTTAATGCCTTCTATAAAACCACCTTCAAGACGGCCAATAATCCCGATGAAGATATGCAAATA > SRR4302535.3891036/1‑94 (MQ=60)
GTGGGTGGTTTCCGACTCTTACCG‑‑‑CCAGGCGGTTAATGCCTTCGATAAAACCGCCTTCAAGACGGCCAATAATCCCGATGAAGATATGCAAATA < SRR4302535.672191/94‑1 (MQ=60)
TGGGTGGTTTCCGACTCTTACCG‑‑‑CCAGGCGGTTAATGCCTTCTATAAAACCACCTTCAAGACGGCCAATAATCCCGATGAAGATATGCAAATAA > SRR4302535.1227624/1‑94 (MQ=60)
GTGGTTTCCGACTCTTACCG‑‑‑CCAGGCGGTTAATGCCTTCTATAAAACCACCTTCAAGACGGCCAATAATCCCGATGAAGATATGCAAATAGAAC < SRR4302535.4255613/94‑1 (MQ=60)
TGGTTTCCGACTCTTACCG‑‑‑CCAGGCGGTTAATGCCTTCTATAAAACCACCTTCAAGACGGCCAATAATCCCGATGAAGATATGCAAATAGAACG < SRR4302535.3883885/94‑1 (MQ=60)
AGGTTTCCGACTCTTACCG‑‑‑CCAGGCGGTTAATGCCTTCTATAAAACCACCTTCAAGACGGCCAATAATCCCGATGAAGATATGCAAATAGAACG < SRR4302535.3777138/94‑1 (MQ=60)
GGTTTCCGACTCTTACCG‑‑‑CCAGGCGGTTAATGCCTTCTATAAAACCACCTTCAAGACGGCCAATAATCCCGATGAAGATATGCAAATAGAACGG > SRR4302535.1080554/1‑94 (MQ=60)
GTTTCCGACTCTTACCG‑‑‑CCAGGCGGTTAATGCCTTCTATAAAACCACCTTCAAGACGGCCAATAATCCCGATGAAGATATGCAAATAGAACGGC > SRR4302535.51152/1‑94 (MQ=60)
TTCCGACTCTTACCG‑‑‑CCAGGCGGTTAATGCCTTCTATAAAACCACCTTCAAGACGGCCAATAATCCCGATGAAGATATGCAAATAGAACGGCAA < SRR4302535.309497/94‑1 (MQ=60)
TTCCGACTCTTACCG‑‑‑CCAGGCGGTTAATGCCTTCTATAAAACCACCTTCAAGACGGCCAATAATCCCGATGAAGATATGCAAATAGAACGGCAA < SRR4302535.2957020/94‑1 (MQ=60)
TCCGACTCTTACCG‑‑‑CCAGGCGGTTAATGCCTTCTATAAAACCACCTTCAAGACGGCCAATAATCCCGATGAAGATATGCAAATAGAACGGCAAT < SRR4302535.1304578/94‑1 (MQ=60)
TCCGACTCTTACCG‑‑‑CCAGGCGGTTAATGCCTTCTATAAAACCACCTTCAAGACGGCCAATAATCCCGATGAAGATATGCAAATAGAACGGCAAT > SRR4302535.708806/1‑94 (MQ=60)
CGACTCTTACCG‑‑‑CCAGGCGGTTAATGCCTTCTATAAAACCACCTTCAAGACGGCCAATAATCCCGATGAAGATATGCAAATAGAACGGCAATTT > SRR4302535.3477958/1‑94 (MQ=60)
ACTCTTACCG‑‑‑CCAGGCGGTTAATGCCTTCTATAAAACCACCTTCAAGACGGCCAATAATCCCGATGAAGATATGCAAATAGAACGGCAATTTAT > SRR4302535.2442999/1‑94 (MQ=60)
ACTCTTACCG‑‑‑CCAGGCGGTTAATGCCTTCTATAAAACCACCTTCAAGACGGCCAATAATCCCGATGAAGATATGCAAATAGAACGGCAATTTAT > SRR4302535.2072161/1‑94 (MQ=60)
ACTCTTACCG‑‑‑CCAGGCGGTTAATGCCTTCTATAAAACCACCTTCAAGACGGCCAATAATCCCGATGAAGATATGCAAATAGAACGGCAATTTAT > SRR4302535.730568/1‑94 (MQ=60)
CTCTTACCG‑‑‑CCAGGCGTTTAATGCCTTCTATAAAACCGCCTTCAAGACGGCCAATAATCCCGATGAAGATATGCAAATAGAACGGCAATTTATT < SRR4302535.2631159/94‑1 (MQ=60)
CTCTTACCG‑‑‑CCAGGCGGTTAATGCCTTCTATAAAACCACCTTCAAGACGGCCAATAATCCCGATGAAGATATGCAAATAGAACGGCAATTTATT > SRR4302535.2451627/1‑94 (MQ=60)
CTCTTACCG‑‑‑CCAGGCGGTTAATGCCTTCTATAAAACCACCTTCAAGACGGCCAATAATCCCGATGAAGATATGCAAATAGAACGGCAATTTATT < SRR4302535.1516237/94‑1 (MQ=60)
TCTTACCG‑‑‑CCAGGCGGTTAATGCCTTCTATAAAACCACCTTCAAGACGGCCAATAATCCCGATGAAGATATGCAAATAGAACGGCAATTTATTT < SRR4302535.2545995/94‑1 (MQ=60)
TTACCG‑‑‑CCAGGCGGTTAATGCCTTCTATAAAACCACCTTCAAGACGGCCAATAATCCCGATGAAGATATGCAAATAGAACGGCAATTTATTTAC < SRR4302535.799796/94‑1 (MQ=60)
cttaccgCCAGGCGGTTAATGCCTTCTATAAAACCACCTTCAAGACGGCCAATAATCCCGATGAAGATATGCAAATAGAACGGCAATTTATTTA > SRR4302535.283377/8‑94 (MQ=60)
cttaccgCCAGGCGGTTAATGCCTTCTATAAAACCACCTTCAAGACGGCCAATAATCCCGATGAAGATATGCAAATAGAACGGCAATTTATTTA > SRR4302535.948499/8‑94 (MQ=60)
accgCCAGGCGGTTAATGCCTTCTATAAAACCACCTTCAAGACGGCCAATAATCCCGATGAAGATATGCAAATAGAACGGCAATTTATTTACGA < SRR4302535.759709/90‑1 (MQ=60)
GCCAGGCGGTTAATGCCTTCTATAAAACCACCTTCAAGACGGCCAATAATCCCGATGAAGATATGCAAATAGAACGGCAATTTATTTACGACAA < SRR4302535.243181/94‑1 (MQ=60)
CCAGGCGGTTAATGCCTTCTATAAAACCACCTTCAAGACGGCCAATAATCCCGATGAAGATATGCAAATAGAACGGCAATTTATTTACGACAAT > SRR4302535.776977/1‑94 (MQ=60)
CCAGGCGGTTAATGCCTTCTATAAAACCACCTTCAAGACGGCCAATAATCCCGATGAAGATATGCAAATAGAACGGCAATTTATTTACGACAAT > SRR4302535.387355/1‑94 (MQ=60)
CCAGGCGGTTAATGCCTTCTATAAAACCACCTTCAAGACGGCCAATAATCCCGATGAAGATATGCAAATAGAACGGCAATTTATTTACGACAAT < SRR4302535.1492738/94‑1 (MQ=60)
|
AGCCGGAAGCCTTTGTTGCCGAACTCTTTGAACATATTGCTGATTATAGCTGGCCGTGGACGTGGGTGGTTTCCGACTCTTACCGCCACCAGGCGGTTAATGCCTTCTATAAAACCACCTTCAAGACGGCCAATAATCCCGATGAAGATATGCAAATAGAACGGCAATTTATTTACGACAAT > NC_000913/3156169‑3156350
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 18 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
