Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I1 R1
|
1696 |
279.3 |
15874187 |
97.8% |
15524954 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
3,157,790 |
G→A |
C457C (TGC→TGT) |
ygiRQ ← |
Fe‑S oxidoreductase |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 3,157,790 | 0 | G | A | 99.4%
| 1101.2
/ ‑6.5
| 313 | C457C (TGC→TGT) | ygiRQ | Fe‑S oxidoreductase |
| Reads supporting (aligned to +/- strand): ref base G (0/2); new base A (140/171); total (140/173) |
| Fisher's exact test for biased strand distribution p-value = 5.04e-01 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
Only 100 of 333 total aligned reads displayed.
TTTAATGCCTTTCAGATCACGCGCACGGCGATAGAGGTTGATCGTTGGTTCGTGGTTCGTGTCCATGTGCGGACAAATATCCGGATAAACGCACGACAAACGGCGACAAGTTTGTTCAGCGCGTGGCGATTTGCAGCGCAACATATACATGTTGGCAGTTGGCCCACCAAGATCGGAAAT > NC_000913/3157700‑3157879
|
tttAATGCCTTTCAGATCACGCGCACGGCGATAGAGGTTGATCGTTGGTTCGTGGTTCGTGTCCATGTGCGGACAAATATCCGGATAAAcaca < 2:4897663/93‑1 (MQ=255)
tttAATGCCTTTCAGATCACGCGCACGGCGATAGAGGTTGATCGTTGGTTCGTGGTTCGTGTCCATGTGCGGACAAATATCCGGATAAAcaca < 1:4077010/93‑1 (MQ=255)
ttAATGCCTTTCAGATCACGCGCACGGCGATAGAGGTTGATCGTTGGTTCGTGGTTCGTGTCCATGTGCGGACAAATATCCGGATAAacacac > 2:1055812/1‑93 (MQ=255)
tAATGCCTTTCAGATCACGCGCACGGCGATAGAGGTTGATCGTTGGTTCGTGGTTCGTGTCCATGTGCGGACAAATATCCGGATAAACACACg > 2:4999976/1‑93 (MQ=255)
tAATGCCTTTCAGATCACGCGCACGGCGATAGAGGTTGATCGTTGGTTCGTGGTTCGTGTCCATGTGCGGACAAATATCCGGATAAACACACg > 2:2991668/1‑93 (MQ=255)
aaTGCCTTTCAGATCACGCGCACGGCGATAGAGGTTGATCGTTGGTTCGTGGTTCGTGTCCATGTGCGGACAAATATCCGGATAAACACACGa < 1:2160361/93‑1 (MQ=255)
tGCCTTTCAGATCACGCGCACGGCGATAGAGGTTGATCGTTGGTTCGTGGTTCGTGTCCATGTGCGGACAGATATCCGGATAAACACACGACa > 1:6659607/1‑93 (MQ=255)
tGCCTTTCAGATCACGCGCACGGCGATAGAGGTTGATCGTTGGTTCGTGGTTCGTGTCCATGTGCGGACAAATATCCGGATAAACACACGACa > 1:7927253/1‑93 (MQ=255)
ccTTTCAGATCACGCGCACGGCGATAGAGGTTGATCGTTGGTTCGTGGTTCGTGTCCATGTGCGGACAAATATCCGGATAAACACACGACaaa < 2:7483758/93‑1 (MQ=255)
ccTTTCAGATCACGCGCACGGCGATAGAGGTTGATCGTTGGTTCGTGGTTCGTGTCCATGTGCGGACAAATATCCGGATAAACACACGACaaa < 2:5112048/93‑1 (MQ=255)
cTTTCAGATCACGCGCACGGCGATAGAGGTTGATCGTTGGTTCGTGGTTCGTGTCCATGTGCGGACAAATATCCGGATAAACACACGACAAAc < 1:6211605/93‑1 (MQ=255)
tttCAGATCACGCGCACGGCGATAGAGGTTGATCGTTGGTTCGTGGTTCGTGTCCATGTGCGGACAAATATCCGGATAAACACACGACAAACg > 2:4173847/1‑93 (MQ=255)
tttCAGATCACGCGCACGGCGATAGAGGTTGATCGTTGGTTCGTGGTTCGTGTCCATGTGCGGACAAATATCCGGATAAACACACGACAAACg < 1:3234106/93‑1 (MQ=255)
tttCAGATCACGCGCACGGCGATAGAGGTTGATCGTTGGTTCGTGGTTCGTGTCCATGTGCGGACAAATATCCGGATAAACACACGACAAACg < 1:5169321/93‑1 (MQ=255)
tCAGATCACGCGCACGGCGATAGAGGTTGATCGTTGGTTCGTGGTTCGTGTCCATGTGCGGACAAATATCCGGATAAACACACGACAAACGGc > 1:5568435/1‑93 (MQ=255)
tCAGATCACGCGCACGGCGATAGAGGTTGATCGTTGGTTCGTGGTTCGTGTCCATGTGCGGACAAATATCCGGATAAACACACGACAAACGGc < 1:6609352/93‑1 (MQ=255)
aGATCACGCGCACGGCGATAGAGGTTGATCGTTGGTTCGTGGTTCGTGTCCATGTGCGGACAAATATCCGGATAAACACACGACAAACGGCGa > 1:4875004/1‑93 (MQ=255)
aGATCACGCGCACGGCGATAGAGGTTGATCGTTGGTTCGTGGTTCGTGTCCATGTGCGGACAAATATACGGATAAACACACGACAAACGGCGa > 2:568620/1‑93 (MQ=255)
tCACGCGCACTGCGATAGAGGTTGATCGTTGGTTCGTGGTTCGTGTCCATGTGCGGACAAATATCCGGATAAACACACGACAAACGGCGACaa < 2:2220561/93‑1 (MQ=255)
cACGCGCACGGCGATAGAGGTTGATCGTTGGTTCGTGGTTCGTGTCCATGTGCGGACAAATATCCGGATAAACACACGACAAACGGCGACAAg < 1:5879896/93‑1 (MQ=255)
cACGGCGATAGAGGTTGATCGTTGGTTCGTGGTTCGTGTCCATGTGCGGACAAATATCCGGATAAACACACGACAAACGGCGACAAGTTTGtt < 2:1734562/93‑1 (MQ=255)
aCGGCGATAGAGGTTGATCGTTGGTTCGTGGTTCGTGTCCATGTGCGGACAAATATCCGGATAAACACACGACAAACGGCGACAAGTTTGTTc > 2:5606481/1‑93 (MQ=255)
cGGCGATAGAGGTTGATCGTTGGTTCGTGGTTCGTGTCCATGTGCGGACAAATATCCGGATAAACACACGACAAACGGCGACAAGTTTGTTCa < 2:873302/93‑1 (MQ=255)
ggCGATAGAGGTTGATCGTTGGTTCGTGGTTCGTGTCCATGTGCGGACAAATATCCGGATAAACACACGACAAACGGCGACAAGTTTGTTCAg < 1:7178095/93‑1 (MQ=255)
ggCGATAGAGGTTGATCGTTGGTTCGTGGTTCGTGTCCATGTGCGGACAAATATCCGGATAAACACACGACAAACGGCGACAAGTTTGTTCAg > 1:169032/1‑93 (MQ=255)
gCGATAGAGGTTGATCGTTGGTTCGTGGTTCGTGTCCATGTGCGGACAAATATCCGGATAAACACACGACAAACGGCGACAAGTTTGTTCAgc < 1:3935152/93‑1 (MQ=255)
gCGATAGAGGTTGATCGTTGGTTCGTGGTTCGTGTCCATGTGCGGACAAATATCCGGATAAACACACGACAAACGGCGACAAGTTTGTTCAgc < 1:2327930/93‑1 (MQ=255)
aTAGAGGTTGATCGTTGGTTCGTGGTTCGTGTCCATGTGCGGACAAATATCCGGATAAACACACGACAAACGGCGACAAGTTTGTTCAGcgcg > 1:4952392/1‑93 (MQ=255)
aTAGAGGTTGATCGTTGGTTCGTGGTTCGTGTCCATGTGCGGACAAATATCCGGATAAACACACGACAAACGGCGACAAGTTTGTTCAGcgcg > 2:4444325/1‑93 (MQ=255)
tAGAGGTTGATCGTTGGTTCGTGGTTCGTGTCCATGTGCGGACAAATATCCGGATAAACACACGACAAACGGCGACAAGTTTGTTCAGCGCGt > 1:4243069/1‑93 (MQ=255)
tAGAGGTTGATCGTTGGTTCGTGGTTCGTGTCCATGTGCGGACAAATATCCGGATAAACACACGACAAACGGCGACAAGTTTGTTCAGCGCGt < 2:2067714/93‑1 (MQ=255)
tAGAGGTTGATCGTTGGTTCGTGGTTCGTGTCCATGTGCGGACAAATATCCGGATAAACACACGACAAACGGCGACAAGTTTGTTCAGCGCGt < 1:2835460/93‑1 (MQ=255)
tAGAGGTTGATCGTTGGTTCGTGGTTCGTGTCCATGTGCGGACAAATATCCGGATAAACACACGACAAACGGCGACAAGTTTGTTCAGCGCGt < 2:7237758/93‑1 (MQ=255)
gagGTTGATCGTTGGTTCGTGGTTCGTGTCCATGTGCGGACAAATATCCGGATAAACACACGACAAACGGCGACAAGTTTGTTCAGCGCGTgg > 1:6271445/1‑93 (MQ=255)
gagGTTGATCGTTGGTTCGTGGTTCGTGTCCATGTGCGGACAAATATCCGGATAAACACACGACAAACGGCGACAAGTTTGTTCAGCGCGTgg > 2:6016745/1‑93 (MQ=255)
agtttGATCGTTGGTTCGTGGTTCGTGTCCATGTGCGGACAAATATCCGGATAAACACACGACAAACGGCGACAAGTTTGTTCAGCGCGTGGc < 2:3373468/90‑1 (MQ=255)
agGTTGATCGTTGGTTCGTGGTTCGTGTCCATGTGCGGACAAATATCCGGATAAACACACGACAAACTGCGACAAGTTTGTTCAGCGCGGGGc > 1:2536427/1‑93 (MQ=255)
agGTTGATCGTTGGTTCGTGGTTCGTGTCCATGTGCGGACAAATATCCGGATAAACACACGACAAACGGCGACAAGTTTGTTCAGCGCGTGGc < 2:7408935/93‑1 (MQ=255)
agGTTGATCGTTGGTTCGTGGTTCGTGTCCATGTGCGGACAAATATCCGGATAAACACACGACAAACGGCGACAAGTTTGTTCAGCGCGTGGc < 2:1465921/93‑1 (MQ=255)
ttGATCGTTGGTTCGTGGTTCGTGTCCATGTGCGGACAAATATCCGGATAAACACACGACAAACGGCGACAAGTTTGTTCAGCGCGTGGCGAt < 1:7441600/93‑1 (MQ=255)
gATCGTTGGTTCGTGGTTCGTGTCCATGTGCGGACAAATATCCGGATAAACACACGACAAACGGCGACAAGTTTGTTCAGCGCGTGGCGAttt > 1:1769620/1‑93 (MQ=255)
gATCGTTGGTTCGTGGTTCGTGTCCATGTGCGGACAAATATCCGGATAAACACACGACAAACGGCGACAAGTTTGTTCAGCGCGTGGCGAttt > 2:1189125/1‑93 (MQ=255)
gATCGTTGGTTCGTGGTTCGTGTCCATGTGCGGACAAATATCCGGATAAACACACGACAAACGGCGACAAGTTTGTTCAGCGCGTGGCGAttt > 2:6617697/1‑93 (MQ=255)
cGTTGGTTCGTGGTTCGTGTCCACGTGCGGACAAATATCCGGATAAACACACGACAAACGGCGACAAGTTTGTTCAGCGCGTGGCGATTTGCa < 2:4277833/93‑1 (MQ=255)
gTTGGTTCGTGGTTCGTGTCCATGTGCGGACAAATATCCGGATAAACACACGACAAACGGCGACAAGTTTGTTCAGCGCGTGGCGATTTGCAg < 2:2741063/93‑1 (MQ=255)
ttGGTTCGTGGTTCGTGTCCATGTGCGGACAAATATCCGGATAAACACACGACAAACGGCGACAAGTTTGTTCAGCGCGTGGCGATTTGCAgc < 2:3778741/93‑1 (MQ=255)
ggttcgtggttcgtGTCCATGTGCGGACAAATATCCGGATAAACACACGACAAACGGCGACAAGTTTGTTCAGCGCGTGGCGATTTGCAgcgc > 1:199032/1‑93 (MQ=255)
ggttcgtggttcgtGTCCATGTGCGGACAAATATCCGGATAAACACACGACAAACGGCGACAAGTTTGTTCAGCGCGTGGCGATTTGCAgcgc > 2:5033955/1‑93 (MQ=255)
ggttcgtggttcgtGTCCATGTGCGGACAAATATCCGGATAAACACACGACAAACGGCGACAAGTTTGTTCAGCGCGTGGCGATTTGCAgcgc < 2:1493096/93‑1 (MQ=255)
ttcgtggttcgtgTCCATGTGCGGACAAATATCCGGATAAACACACGACAAACGGCGACAAGTTTGTTCAGCGCGTGGCGATTTGCAGCGCaa > 2:6527649/1‑93 (MQ=255)
ttcgtggttcgtgTCCATGTGCGGACAAATATCCGGATAAACACACGACAAACGGCGACAAGTTTGTTCAGCGCGTGGCGATTTGCAGCGCaa > 1:7596578/1‑93 (MQ=255)
cgtggttcgtgTCCATGTGCGGACAAATATCCGGATAAACACACGACAAACGGCGACAAGTTTGTTCAGCGCGTGGCGATTTGCAGCGCAACa < 2:1966610/93‑1 (MQ=255)
gtggttcgtgTCCATGTGCGGACAAATATCCGGATAAACACACGACAAACGGCGACAAGTTTGTTCAGCGCGTGGCGATTTGCAGCGCAACat < 2:4642686/93‑1 (MQ=255)
tggttcgtgTCCATGTGCGGACAAATATCCGGATAAACACACGACAAACGGCGACAAGTTTGTTCAGCGCGTGGCGATTTGCAGCGCAACata < 2:2271784/93‑1 (MQ=255)
ttcgtgTCCATGTGCGGACAAATATCCGGATAAACACACGACAAACGGCGACAAGTTTGTTCAGCGCGTGGCGATTTGCAGCGCAACATATAc > 2:6227316/1‑93 (MQ=255)
ttcgtgTCCATGTGCGGACAAATATCCGGATAAACACACGACAAACGGCGACAAGTTTGTTCAGCGCGTGGCGATTTGCAGCGCAACATATAc > 1:4634110/1‑93 (MQ=255)
ttcgtgTCCATGTGCGGACAAATATCCGGATAAACACACGACAAACGGCGACAAGTTTGTTCAGCGCGTGGCGATTTGCAGCGCAACATATAc < 1:4356985/93‑1 (MQ=255)
ttcgtgTCCATGTGCGGACAAATATCCGGATAAACACACGACAAACGGCGACAAGTTTGTTCAGCGCGTGGCGATTTGCAGCGCAACATATAc < 1:5673034/93‑1 (MQ=255)
ttcgtgTCCATGTGCGGACAAATATCCGGATAAACACACGACAAACGGCGACAAGTTTGTTCAGCGCGTGGCGATTTGCAGCGCAACATATAc < 1:772539/93‑1 (MQ=255)
tcgtgTCCATGTGCGGACAAATATCCGGATAAACGCACGACAAACGGCGACAAGTTTGTTCAGCGCGTGGCGATTTGCAGCGCAACATATACa < 1:5031931/93‑1 (MQ=255)
cgtgTCCATGTGCGGACAAATATCCGGATAAACACACGACAAACGGCGACAAGTTTGTTCAGCGCGTGGCGATTTGCAGCGCAACATATACAt > 2:1641085/1‑93 (MQ=255)
tgtCCATGTGCGGACAAATATCCGGATAAACACACGACAAACGGCGACAAGTTTGTTCAGCGCGTGGCGATTTGCAGCGCAACATATACATGt < 1:1103141/93‑1 (MQ=255)
tgtCCATGTGCGGACAAATATCCGGATAAACACACGACAAACGGCGACAAGTTTGTTCAGCGCGTGGCGATTTGCAGCGCAACATATACATGt < 1:7396453/93‑1 (MQ=255)
gtCCATGTGCGGCCACATATCCGGATAAACACACGACAAACGGCGACAAGTTTGTTCAGCGCGTGGCGATTTGCAGCGCAACATATACATGtt < 2:7025661/93‑1 (MQ=255)
gtCCATGTGCGGACAAATATCCGGATAAACACACGACAAACGGCGACAAGTTTGTTCAGCGCGTGGCGATTTGCAGCGCAACATATACATGtt < 1:7282104/93‑1 (MQ=255)
gtCCATGTGCGGACAAATATCCGGATAAACACACGACAAACGGCGACAAGTTTGTTCAGCGCGTGGCGATTTGCAGCGCAACATATACATGtt > 2:2342114/1‑93 (MQ=255)
gtCCATGTGCGGACAAATATCCGGATAAACACACGACAAACGGCGACAAGTTTGTTCAGCGCGTGGCGATTTGCAGCGCAACATATACATGtt < 2:4728830/93‑1 (MQ=255)
tCCATGTGCGGACAAATATCCGGATAAACACACGACAAACGGCGACAAGTTTGTTCAGCGCGTGGCGATTTGCAGCGCAACATATACATGTTg > 2:2460260/1‑93 (MQ=255)
ccATGTGCGGACAAATATCCGGATAAACACACGACAAACGGCGACAAGTTTGTTCAGCGCGTGGCGATTTGCAGCGCAACATATACATGTTgg < 1:875848/93‑1 (MQ=255)
ccATGTGCGGACAAATATCCGGATAAACACACGACAAACGGCGACAAGTTTGTTCAGCGCGTGGCGATTTGCAGCGCAACATATACATGTTgg < 1:4212976/93‑1 (MQ=255)
cATGTGCGGACAAATATCCGGATAAACACACGACAAACGGCGACAAGTTTGTTCAGCGCGTGGCGATTTGCAGCGCAACATATACATGTTGGc > 2:3945402/1‑93 (MQ=255)
cATGTGCGGACAAATATCCGGATAAACACACGACAAACGGCGACAAGTTTGTTCAGCGCGCGGCGATTTGCAGCGAAACATATACATGTTGGc > 1:7850003/1‑93 (MQ=255)
aTGTGCGGACAAATATCCGGATAAACACACGACAAACGGCGACAAGTTTGTTCAGCGCGTGGCGATTTGCAGCGCAACATATACATGTTGGCa > 2:360303/1‑93 (MQ=255)
tgtgCGGACAAATATCCGGATAAACACACGACAAACGGCGACAAGTTTGTTCAGCGCGTGGCGATTTGCAGCGCAACATATACATGTTGGCAg > 1:2340274/1‑93 (MQ=255)
gtgCGGACAAATATCCGGATAAACACACGACAAACGGCGACAAGTTTGTTCAGCGCGTGGCGATTTGCAGCGCAACATATACATGTTGGCAGt < 1:3435945/93‑1 (MQ=255)
gtgCGGACAAATATCCGGATAAACACACGACAAACGGCGACAAGTTTGTTCAGCGCGTGGCGATTTGCAGCGCAACATATACATGTTGGCAGt < 2:4337235/93‑1 (MQ=255)
gCGGACAAATATCCGGATAAACACACGACAAACGGCGACAAGTTTGTTCAGCGCGTGGCGATTTGCAGCGCAACATATACATGTTGGCAGTTg < 1:1546307/93‑1 (MQ=255)
gCGGACAAATATCCGGATAAACACACGACAAACGGCGACAAGTTTGTTCAGCGCGTGGCGATTTGCAGCGCAACATATACATGTTGGCAGTTg < 2:6302581/93‑1 (MQ=255)
gACAAATATCCGGATAAACACACGACAAACGGCGACAAGTTTGTTCAGCGCGTGGCGATTTGCAGCGCAACATATACATGTTGGCAGTTGGcc < 2:4089917/93‑1 (MQ=255)
aCAAATATCCGGATAAACACACGACAAACGGCGACAAGTTTGTTCAGCGCGTGGCGATTTGCAGCGCAACATATACATGTTGGCAGTTGGccc < 2:3059503/93‑1 (MQ=255)
aCAAATATCCGGATAAACACACGACAAACGGCGACAAGTTTGTTCAGCGCGTGGCGATTTGCAGCGCAACATATACATGTTGGCAGTTGGccc < 2:5817400/93‑1 (MQ=255)
aaaTATCCGGATAAACACACGACAAACGGCGACAAGTTTGTTCAGCGCGTGGCGATTTGCAGCGCAACATATACATGTTGGCAGTTGGccccc > 2:6800020/1‑91 (MQ=255)
aaaTATCCGGATAAACACACGACAAACGGCGACAAGTTTGTTCAGCGCGTGGCGATTTGCAGCGCAACATATACATGTTGGCAGTTGGCccac > 1:6549793/1‑93 (MQ=255)
aaaTATCCGGATAAACACACGACAAACGGCGACAAGTTTGTTCAGCGCGTGGCGATTTGCAGCGCAACATATACATGTTGGCAGTTGGCccac < 2:6966734/93‑1 (MQ=255)
tctCCGGATAAACACACGACAAACGGCGGCAAGTTTGTTCAGCGCGTGGCGATTTGCAGCGCAACATATACATGTTGGCAGTTGGCCCACCaa < 2:2404809/91‑1 (MQ=255)
tatCCGGATAAACACACGACAAACGGCGACAAGTTTGTTCAGCGCGTGGCGATTTGCAGCGCAACATATACATGTTGGCAGTTGGCCCACCaa > 1:7032515/1‑93 (MQ=255)
tCCGGATAAACACACGACAAACGGCGACAAGTTTGTTCAGCGCGTGGCGATTTGCAGCGCAACATATACATGTTGGCAGTTGGCCCACCAAGa < 1:2706430/93‑1 (MQ=255)
tCCGGATAAACACACGACAAACGGCGACAAGTTTGTTCAGCGCGTGGCGATTTGCAGCGCAACATATACATGTTGGCAGTTGGCCCACCAAGa > 1:367706/1‑93 (MQ=255)
ccGGATAAACACACGACAAACGGCGACAAGTTTGTTCAGCGCGTGGCGATTTGCAGCGCAACATATACATGTTGGCAGTTGGCCCACCAAGAt < 1:840567/93‑1 (MQ=255)
ccGGATAAACACACGACAAACGGCGACAAGTTTGTTCAGCGCGTGGCGATTTGCAGCGCAACATATACATGTTGGCAGTTGGCCCACCAAGAt < 1:5405234/93‑1 (MQ=255)
ccGGATAAACACACGACAAACGGCGACAAGTTTGTTCAGCGCGTGGCGATTTGCAGCGCAACATATACATGTTGGCAGTTGGCCCACCAAGAt < 2:5498943/93‑1 (MQ=255)
gATAAACACACGACAAACGGCGACAAGTTTGTTCAGCGCGTGGCGATTTGCAGCGCAACATATACATGTTGGCAGTTGGCCCACCAAGATCgg > 1:1368081/1‑93 (MQ=255)
aTAAACACACGACAAACGGCGACAAGTTTGTTCAGCGCGTGGCGATTTGCAGCGCAACATATACATGTTGGCAGTTGGCCCACCAAGATCGGa > 2:7885480/1‑93 (MQ=255)
tAAACACACGACAAACGGCGACAAGTTTGTTCAGCGCGTGGCGATTTGCAGCGCAACATATACATGTTGGCAGTTGGCCCACCAAGATCGGaa > 2:5749001/1‑93 (MQ=255)
tAAACACACGACAAACGGCGACAAGTTTGTTCAGCGCGTGGCGATTTGCAGCGCAACATATACATGTTGGCAGTTGGCCCACCAAGATCGGaa > 2:735658/1‑93 (MQ=255)
tAAACACACGACAAACGGCGACAAGTTTGTTCAGCGCGTGGCGATTTGCAGCGCAACATATACATGTTGGCAGTTGGCCCACCAAGATCGGaa > 1:3018423/1‑93 (MQ=255)
aaaCACACGACAAACGGCGACAAGTTTGTTCAGCGCGTGGCGATTTGCAGCGCAACATATACATGTTGGCAGTTGGCCCACCAAGATCGGaaa < 1:1019369/93‑1 (MQ=255)
aaaCACACGACAAACGGCGACAAGTTTGTTCAGCGCGTGGCGATTTGCAGCGCAACATATACATGTTGGCAGTTGGCCCACCAAGATCGGaaa > 1:5523311/1‑93 (MQ=255)
aaaCACACGACAAACGGCGACAAGTTTGTTCAGCGCGTGGCGATTTGCAGCGCAACATATACATGTTGGCAGTTGGCCCACCAAGATCGGaaa < 2:7818433/93‑1 (MQ=255)
aaCACACGACAAACGGCGACAAGTTTGTTCAGCGCGTGGCGATTTGCAGCGCAACATATACATGTTGGCAGTTGGCCCACCAAGATCGGAAAt > 2:6667108/1‑93 (MQ=255)
|
TTTAATGCCTTTCAGATCACGCGCACGGCGATAGAGGTTGATCGTTGGTTCGTGGTTCGTGTCCATGTGCGGACAAATATCCGGATAAACGCACGACAAACGGCGACAAGTTTGTTCAGCGCGTGGCGATTTGCAGCGCAACATATACATGTTGGCAGTTGGCCCACCAAGATCGGAAAT > NC_000913/3157700‑3157879
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 28 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
CTTTTTAATGCCTTTCAGATCACGCGCACGGCGATAGAGGTTGATCGTTGGTTCGTGGTTCGTGTCCATGTGCGGACAAATATCCGGATAAACGCACGACAAACGGCGACAAGTTTGTTCAGCGCGTGGCGATTTGCAGCGCAACATATACATGTTGGCAGTTGGCCCACCAAGATCGGAAATCACG > NC_000913/3157697‑3157883
|
CTTTTTAATGCCTTTCAGATCACGCGCACGGCGATAGAGGTTGATCGTTGGTTCGTGGTTCGTGTCCATGTGCGGACAAATATCCGGATAAACA < SRR4302543.7448532/94‑1 (MQ=60)
CTTTTTAATGCCTTTCAGATCACGCGCACGGCGATAGAGGTTGATCGTTGGTTCGTGGTTCGTGTCCATGTGCGGACAAATATCCGGATAAACA > SRR4302543.1741832/1‑94 (MQ=60)
TTTTTAATGCCTTTCAGATCACGCGCACGGCGATAGAGGTTGATCGTTGGTTCGTGGTTCGTGTCCATGTGCGGACAAATATCCGGATAAACAC < SRR4302543.941092/94‑1 (MQ=60)
TTTTTAATGCCTTTCAGATCACGCGCACGGCGATAGAGGTTGATCGTTGGTTCGTGGTTCGTGTCCATGTGCGGACAAATATCCGGATAAACAC < SRR4302543.1876036/94‑1 (MQ=60)
TTTTAATGCCTTTCCGATCACGCGCACGGCGATAGAGGTTGATCGTTGGTTCGTGGTTCGTGTCCATGTGCGGACAAATATCCGGATAAACACA < SRR4302543.332494/94‑1 (MQ=60)
TTTTAATGCCTTTCAGATCACGCGCACGGCGATAGAGGTTGATCGTTGGTTCGTGGTTCGTGTCCATGTGCGGACAAATATCCGGATAAACACA < SRR4302543.332495/94‑1 (MQ=60)
TTTAGTGCCTTTCAGATCACGCGCACGGCGATAGAGGTTGATCGTTGGTTCGTGGTTCGTGTCCATGTGCGGACAAATATCCGGATAAACACAC < SRR4302543.7163281/94‑1 (MQ=60)
TTTAATGCCTTTCAGATCACGCGCACGGCGATAGAGGTTGATCGTTGGTTCGTGGTTCGTGTCCATGTGCGGACAAATATCCGGATAAACACAC < SRR4302543.4113559/94‑1 (MQ=60)
TTAATGCCTTTCAGATCACGCGCACGGCGATAGAGGTTGATCGTTGGTTCGTGGTTCGTGTCCATGTGCGGACAAATATCCGGATAAACACACG < SRR4302543.7656822/94‑1 (MQ=60)
TAATGCCTTTCAGATCACGCGCACGGCGATAGAGGTTGATCGTTGGTTCGTGGTTCGTGTCCATGTGCGGACAAATATCCGGATAAACACACGA < SRR4302543.6728488/94‑1 (MQ=60)
AATGCCTTTCAGATCACGCGCACGGCGATAGAGGTTGATCGTTGGTTCGTGGTTCGTGTCCATGTGCGGACAAATATCCGGATAAACACACGAC < SRR4302543.2179713/94‑1 (MQ=60)
ATGCCTTTCAGATCACGCGCACGGCGATAGAGGTTGATCGTTGGTTCGTGGTTCGTGTCCATGTGCGGGCAAATATCCGGATAAACACACGACA > SRR4302543.5593555/1‑94 (MQ=60)
ATGCCTTTCAGATCACGCGCACGGCGATAGAGGTTGATCGTTGGTTCGTGGTTCGTGTCCATGTGCGGACAGATATCCGGATAAACACACGACA > SRR4302543.6722483/1‑94 (MQ=60)
ATGCCTTTCAGATCACGCGCACGGCGATAGAGGTTGATCGTTGGTTCGTGGTTCGTGTCCATGTGCGGACAAATATCCGGATAAACACACGACA > SRR4302543.7715091/1‑94 (MQ=60)
ATGCCTTTCAGATCACGCGCACGGCGATAGAGGTTGATCGTTGGTTCGTGGTTCGTGTCCATGTGCGGACAAATATCCGGATAAACACACGACA > SRR4302543.8001690/1‑94 (MQ=60)
ATGCCTTTCAGATCACGCGCACGGCGATAGAGGTTGATCGTTGGTTCGTGGTTCGTGTCCATGTGCGGACAAATATCCGGATAAACACACGACA < SRR4302543.39205/94‑1 (MQ=60)
ATGCCTTTCAGATCACGCGCACGGCGATAGAGGTTGATCGTTGGTTCGTGGTTCGTGTCCATGTGCGGACAAATATCCGGATAAACACACGACA < SRR4302543.2860867/94‑1 (MQ=60)
TGCCTTTCAGATCACGCGCACGGCGATAGAGGTTGATCGTTGGTTCGTGGTTCGTGTCCATGTGCGGACAAATATCCGGATAAACACACGACAA > SRR4302543.10668/1‑94 (MQ=60)
CCTTTCAGATCACGCGCACGGCGATAGAGGTTGATCGTTGGTTCGTGGTTCGTGTCCATGTGCGGACAAATATCCGGATAAACACACGACAAAC < SRR4302543.613361/94‑1 (MQ=60)
CCTTTCAGATCACGCGCACGGCGATAGAGGTTGATCGTTGGTTCGTGGTTCGTGTCCATGTGCGGACAAATATCCGGATAAACACACGACAAAC < SRR4302543.1664147/94‑1 (MQ=60)
CCTTTCAGATCACGCGCACGGCGATAGAGGCTGATCGTTGGTTCGTGGTTCGTGTCCATGTGCGGACAAATATCCGGATAAACACACGACAAAC > SRR4302543.4473267/1‑94 (MQ=60)
CTTTCAGATCACGCGCACGGCGATAGAGGTTGATCGTTGGTTCGTGGTTCGTGTCCATGTGCGGACAAATATCCGGATAAACACACGACAAACG > SRR4302543.6404242/1‑94 (MQ=60)
CTTTCAGATCACGCGCACGGCGATAGAGGTTGATCGTTGGTTCGTGGTTCGTGTCCATGTGCGGACAAATATCCGGATAAACACACGACAAACG < SRR4302543.2037882/94‑1 (MQ=60)
CTTTCAGATCACGCGCACGGCGATAGAGGTTGATCGTTGGTTCGTGGTTCGTGTCCATGTGCGGACAAATATCCGGATAAACACACGACAAACG < SRR4302543.6270257/94‑1 (MQ=60)
CTTTCAGATCACGCGCACGGCGATAGAGGTTGATCGTTGGTTCGTGGTTCGTGTCAATGTGCGGACAAATATCCGGATAAACACAAGACAAACG > SRR4302543.1959031/1‑94 (MQ=60)
CTTTCAGATCACGCGCACGGCGATAGAGGTTGATCGTTGGTTCGTGGTTCGTGTACATGTGCGGACAAATATCCGGATACACACACGCCAAACG > SRR4302543.2297508/1‑94 (MQ=60)
TTTCAGATCACGCGCACGGCGATAGAGGTTGATCGTTGGTTCGTGGTTCGTGTCCATGTGCGGACAAATATCCGGATAAACACACGACAAACGG < SRR4302543.3263361/94‑1 (MQ=60)
TTTCAGATCACGCGCACGGCGATAGAGGTTGATCGTTGGTTCGTGGTTCGTGTCCATGTGCGGACAAATATCCGGATAAACACACGACAAACGG < SRR4302543.5216015/94‑1 (MQ=60)
TTTCAGATCACGCGCACGGCGATAGAGGTTGATCGTTGGTTCGTGGTTCGTGTCCATGTGCGGACAAATATCCGGATAAACACACGACAAACGG < SRR4302543.7859252/94‑1 (MQ=60)
TTTCAGATCACGCGCACGGCGATAGAGGTTGATCGTTGGTTCGTGGTTCGTGTCCATGTGCGGACAAATATCCGGATAAACACACGACAAACGG < SRR4302543.4872417/94‑1 (MQ=60)
TTCAGATCACGCGCACGGCGATAGAGGTTGATCGTTGGTTCGTGGTTCGTGTCCATGTGCGGACAAATATCCGGATAAACACACGACAAACGGC > SRR4302543.5619100/1‑94 (MQ=60)
TTCAGATCACGCGCACGGCGATAGAGGTTGATCGTTGGTTCGTGGTTCGTGTCCATGTGCGGACAAATATCCGGATAAACACACGACAAACGGC > SRR4302543.7322131/1‑94 (MQ=60)
TCAGATCACGCGCACGGCGATAGAGGTTGATCGTTGGTTCGTGGTTCGTGTCCATGTGCGGACAAATATCCGGATAAACACACGACAAACGGCG < SRR4302543.6671644/94‑1 (MQ=60)
TCAGATCACGCGCACGGCGATAGAGGTTGATCGTTGGTTCGTGGTTCGTGTCCATGTGCGGACAAATATCCGGATAAACACACGACAAACGGCG < SRR4302543.8006183/94‑1 (MQ=60)
CAGATCACGCGCACGGCGATAGAGGTTGATCGTTGGTTCGTGGTTCGTGTCCATGTGCGGACAAATATCCGGATAAACACACGACAAACGGCGA > SRR4302543.4919437/1‑94 (MQ=60)
AGATCACGCGCACGGCGATAGAGGTTGATCGTTGGTTCGTGGTTCGTGTCCATGTGCGGACAAATATCCGGATAAACACACGACAAACGcggaa > SRR4302543.909460/1‑89 (MQ=60)
AGATCACGCGCACGGCGATAGAGGTTGATCGTTGGTTCGTGGTTCGTGTCCATGTGCGGACAAATATCCGGATAAACACACGACAAACGGCGAC > SRR4302543.7453593/1‑94 (MQ=60)
GATCACGCGCACGGCGATAGAGGTTGATCGTTGGTTCGTGGTTCGTGTCCATGTGCGGACAAATATCCGGATAAACACACGACAAACGGCGACA < SRR4302543.240872/94‑1 (MQ=60)
ATCACGCGCACGGCGATAGAGGTTGATCGTTGGTTCGTGGTTCGTGTCCATGTGCGGACAAATATCCGGATAAACACACGACAAACGGCGACAA > SRR4302543.7817108/1‑94 (MQ=60)
TCACGCGCACGGCGATAGAGGTTGATCGTTGGTTCGTGGTTCGTGTCCATGTGCGGACAAATATCCGGATAAACACACGACAAACGGCGACAAG < SRR4302543.7621031/94‑1 (MQ=60)
TCACGCGCACGGCGATAGAGGTTGATCGTTGGTTCGTGGTTCGTGTCCATGTGCGGACAAATATCCGGATAAACACACGACAAACGGCGACAAG > SRR4302543.2060629/1‑94 (MQ=60)
TCACGCGCACGGCGATAGAGGTTGATCGTTGGTTCGTGGTTCGTGTCCATGTGCGGACAAATATCCGGATAAACACACGACAAACGGCGACAAG < SRR4302543.4641688/94‑1 (MQ=60)
TCACGCGCACGGCGATAGAGGTTGATCGTTGGTTCGTGGTTCGTGTCCATGTGCGGACAAATATCCGGATAAACACACGACAAACGGCGACAAG < SRR4302543.4335429/94‑1 (MQ=60)
CACGCGCACGGCGATAGAGGTTGATCGTTGGTTCGTGGTTCGTGTCCATGTGCGGACAAATATCCGGATAAACACACGACAAACGGCGACAAGT < SRR4302543.5933476/94‑1 (MQ=60)
CGCGCACGGCGATAGAGGTTGATCGTTGGTTCGTGGTTCGTGTCCATGTGCGGACAAATATCCGGATAAACACACGACAAACGGCGACAAGTTT > SRR4302543.833823/1‑94 (MQ=60)
GCGCACGGCGATAGAGGTTGATCGTTGGTTCGTGGTTCGTGTCCATGTGCGGACAAATATCCGGATAAACACACGACAAACGGCGACAAGTTTG < SRR4302543.6309197/94‑1 (MQ=60)
GCACGGCGATAGAGGTTGATCGTTGGTTCGTGGTTCGTGTCCATGTGCGGACAAATATCCGGATAAACACACGACAAACGGCGACAAGTTTGTT < SRR4302543.1891114/94‑1 (MQ=60)
GCACGGCGATAGAGGTTGATCGTTGGTTCGTGGTTCGTGTCCATGTGCGGACAAATATCCGGATAAACACACGACAAACGGCGACAAGTTTGTT > SRR4302543.1275234/1‑94 (MQ=60)
CACGGCGATAGAGGTTGATCGTTGGTTCGTGGTTCGTGTCCATGTGCGGACAAATATCCGGATAAACACACGACAAACGGCGACAAGTTTGTTC > SRR4302543.6151112/1‑94 (MQ=60)
ACGGCGATAGAGGTTGATCGTTGGTTCGTGGTTCGTGTCCATGTGCGGACAAATATCCGGATAAACACACGACAAACGGCGACAAGTTTGTTCA > SRR4302543.4156159/1‑94 (MQ=60)
CGGCGATAGAGGTTGATCGTTGGTTCGTTGTTCGTGTCCATGTGCGGACAAATATCCGGATAAACACACGACAAACGGCGACAAGTTTGTTCAG < SRR4302543.2898190/94‑1 (MQ=60)
CGGCGATAGAGGTTGATCGTTGGTTCGTGGTTCGTGTCCATGTGCGGACAAATATCCGGATAAACACACGACAAACGGCGACAAGTTTGTTCAG < SRR4302543.2898189/94‑1 (MQ=60)
CGGCGATAGAGGTTGATCGTTGGTTCGTGGTTCGTGTCCATGTGCGGACAAATATCCGGATAAACACACGACAAACGGCGACAAGTTTGTTCAG > SRR4302543.170483/1‑94 (MQ=60)
CGGCGATAGAGGTTGATCGTTGGTTCGTGGTTCGTGTCCATGTGCGGACAAATATCCGGATAAACACACGACAAACGGCGACAAGTTTGTTCAG < SRR4302543.7308257/94‑1 (MQ=60)
CGGCGATAGAGGTTGATCGTTGGTTCGTGGTTCGTGTCCATGTGCGGACAAATATCCGGATAAACACACGACAAACGGCGACAAGTTTGTTCAG < SRR4302543.1865587/94‑1 (MQ=60)
CGGCGATAGAGGTTGATCGTTGGTTCGTGGTTCGTGTCCATGTGCGGACAAATATCCGGATAAACACACGACAAACGGCGACAAGTTTGTTCAG < SRR4302543.7736361/94‑1 (MQ=60)
GGCGATAGAGGTTGATCGTTGGTTCGTGGTTCGTGTCCATGTGCGGACAAATATCCGGATAAACACACGACAAACGGCGACAAGTTTGTTCAGC < SRR4302543.7247771/94‑1 (MQ=60)
GCGATAGAGGTTGATCGTTGGTTCGTGGTTCGTGTCCATGTGCGGACAAATATCCGGATAAACACACGACAAACGGCGACAAGTTTGTTCAGCG < SRR4302543.2349071/94‑1 (MQ=60)
GCGATAGAGGTTGATCGTTGGTTCGTGGTTCGTGTCCATGTGCGGACAAATATCCGGATAAACACACGACAAACGGCGACAAGTTTGTTCAGCG < SRR4302543.3969921/94‑1 (MQ=60)
CGATAGAGGTTGATCGTTGGTTCGTGGTTCGTGTCCATGTGCGGACAAATATCCGGATAAACACACGACAAACGGCGACAAGTTTGTTCAGCGC > SRR4302543.6328935/1‑94 (MQ=60)
GATAGAGGTTGATCGTTGGTTCGTGGTTCGTGTCCATGTGCGGACAAATATCCGGATAAACACACGACAAACGGCGACAAGTTTGTTCAGCGCG > SRR4302543.4997494/1‑94 (MQ=60)
GATAGAGGTTGATCGTTGGTTCGTGGTTCGTGTCCATGTGCGGACAAATATCCGGATAAACACACGACAAACGGCGACAAGTTTGTTCAGCGCG > SRR4302543.4997493/1‑94 (MQ=60)
ATAGAGGTTGATCGTTGGTTCGTGGTTCGTGTCCATGTGCGGACAAATATCCGGATAAACACACGACAAACGGCGACAAGTTTGTTCAGCGCGT > SRR4302543.862521/1‑94 (MQ=60)
ATAGAGGTTGATCGTTGGTTCGTGGTTCGTGTCCATGTGCGGACAAATATCCGGATAAACACACGACAAACGGCGACAAGTTTGTTCAGCGCGT > SRR4302543.4281572/1‑94 (MQ=60)
ATAGAGGTTGATCGTTGGTTCGTGGTTCGTGTCCATGTGCGGACAAATATCCGGATAAACACACGACAAACGGCGACAAGTTTGTTCAGCGCGG > SRR4302543.85009/1‑94 (MQ=60)
TAGAGGTTGATCGTTGGTTCGTGGTTCGTGTCCATGTGCGGACAAATATCCGGATAAACACACGACAAACGGCGACAAGTTTGTTCAGCGCGTG < SRR4302543.2861389/94‑1 (MQ=60)
TAGAGGTTGATCGTTGGTTCGTGGTTCGTGTCCATGTGCGGACAAATATCCGGATAAACACACGACAAACGGCGACAAGTTTGTTCAGCGCGTG < SRR4302543.3236812/94‑1 (MQ=60)
AGAGGTTGATCGTTGGTTCGTGGTTCGTGTCCATGTGCGGACAAATATCCGGATAAACACACGACAAACGGCGACAAGTTTGTTCAGCGCGTGG > SRR4302543.6330576/1‑94 (MQ=60)
AGAGGTTGATCGTTGGTTCGTGGTTCGTGTCCATGTGCGGACAAATATCCGGATAAACACACGACAAACGGCGACAAGTTTGTTCAGCGCGTGG > SRR4302543.1683253/1‑94 (MQ=60)
AGAGGTTGATCGTTGGTTCGTGGTTCGTGTCCATGTGCGGACAAATATCCGGATAAACACACGACAAACGGCGACAAGTTTGTTCAGCGCGTGG < SRR4302543.1730657/94‑1 (MQ=60)
GAGGTTGATCGTTGGTTCGTGGTTCGTGTCCATGTGCGGACAAATATCCGGATAAACACACGACAAACTGCGACAAGTTTGTTCAGCGCGGGGC > SRR4302543.2559535/1‑94 (MQ=60)
GAGGTTGATCGTTGGTTCGTGGTTCGTGTCCATGTGCGGACAAATATCCGGATAAACACACGACAAACGGCGACAAGTTTGTTCAGCGCGTGGC < SRR4302543.7010189/94‑1 (MQ=60)
AGGTTGATCGTTGGTTCGTGGTTCGTGTCCATGTGCGGACAAATATCCGGATAAACACACGACAAACGGCGACAAGTTTGTTCAGCGCGTGGCG < SRR4302543.1427454/94‑1 (MQ=60)
AGGTTGATCGTTGGTTCGTGGTTCGTGTCCATGTGCGGACAAATATCCGGATAAACACACGACAAACGGCGACAAGTTTGTTCAGCGCGTGGCG > SRR4302543.5056957/1‑94 (MQ=60)
AGGTTGATCGTTGGTTCGTGGTTCGTGTCCATGTGCGGACAAATATCCGGATAAACACACGACAAACGGCGACAAGTTTGTTCAGCGCGTGGCG > SRR4302543.6821236/1‑94 (MQ=60)
GTTGATCGTTGGTTCGTGGTTCGTGTCCATGTGCGGACAAATATCCGGATAAACACACGACAAACGGCGACAAGTTTGTTCAGCGCGTGGCGAT > SRR4302543.1155181/1‑94 (MQ=60)
TTGATCGTTGGTTCGTGGTTCGTGTCCATGTGCGGACAAATATCCGGATAAACACACGACAAACGGCGACAAGTTTGTTCAGCGCGTGGCGATT < SRR4302543.7512923/94‑1 (MQ=60)
TTGATCGTTGGTTCGTGGTTCGTGTCCATGTGCGGACAAATATCCGGATAAACACACGACAAACGGCGACAAGTTTGTTCAGCGCGTGGCGATT > SRR4302543.404203/1‑94 (MQ=60)
TGATCGTTGGTTCGTGGTTCGTGTCCATGTGCGGACAAATATCCGGATAAACACACGACAAACGGCGACAAGTTTGTTCAGCGCGTGGCGATTT > SRR4302543.1785444/1‑94 (MQ=60)
GATCGTTGGTTCGTGGTTCGTGTCCATGTGCGGACAAATATCCGGATAAACACACGACAAACGGCGACAAGTTTGTTCAGCGCGTGGCGATTTG < SRR4302543.5200947/94‑1 (MQ=60)
ATCGTTGGTTCGTGGTTCGTGTCCATGTGCGGACAAATATCCGGATAAACACACGACAAACGGCGACAAGTTTGTTCAGCGCGTGGCGATTTGC > SRR4302543.4950369/1‑94 (MQ=60)
TCGTTGGTTCGTGGTTCGTGTCCATGTGCGGACAAATATCCGGATAAACACACGACAAACGGCGACAAGTTTGTTCAGCGCGTGGCGATTTGCA < SRR4302543.3984027/94‑1 (MQ=60)
CGTTGGTTCGTGGTTCGTGTCCATGTGCGGACAAATATCCGGATAAACACACGACAAACGGCGACAAGTTTGTTCAGCGCGTGGCGATTTGCAG > SRR4302543.1672163/1‑94 (MQ=60)
CGTTGGTTCGTGGTTCGTGTCCATGTGCGGACAAATATCCGGATAAACACACGACAAACGGCGACAAGTTTGTTCAGCGCGTGGCGATTTGCAG < SRR4302543.2154328/94‑1 (MQ=60)
CGTTGGTTCGTGGTTCGTGTCCATGTGCGGACAAATATCCGGATAAACACACGACAAACGGCGACAAGTTTGTTCAGCGCGTGGCGATTTGCAG < SRR4302543.5528965/94‑1 (MQ=60)
GTTGGTTCGTGGTTCGTGTCCATGTGCGGACAAATATCCGGATAAACACACGACAAACGGCGACAAGTTTGTTCAGCGCGTGGCGATTTGCAGC < SRR4302543.102972/94‑1 (MQ=60)
GTTGGTTCGTGGTTCGTGTCCATGTGCGGACAAATATCCGGATAAACACACGACAAACGGCGACAAGTTTGTTCAGCGCGTGGCGATTTGCAGC > SRR4302543.4764110/1‑94 (MQ=60)
GTTGGTTCGTGGTTCGTGTCCATGTGCGGACAAATATCCGGATAAACACACGACAAACGGCGACAAGTTTGTTCAGCGCGTGGCGATTTGCAGC > SRR4302543.2410290/1‑94 (MQ=60)
TGGTTCGTGGTTCGTGTCCATGTGCGGACAAATATCCGGATAAACACACGACAAACGGCGACAAGTTTGTTCAGCGCGTGGCGATTTGCAGCGC > SRR4302543.200713/1‑94 (MQ=60)
GTTCGTGGTTCGTGTCCATGTGCGGACAAATATCCGGATAAACACACGACAAACGGCGACAAGTTTGTTCAGCGCGTGGCGATTTGCAGCGCAA > SRR4302543.7668738/1‑94 (MQ=60)
TTCGTGGTTCGTGTCCATGTGCGGACAAATATCCGGATAAACACACGACAAACGGCGACAAGTTTGTTCAGCGCGTGGCGATTTGCAGCGCAAC > SRR4302543.426491/1‑94 (MQ=60)
TCGTGGTTCGTGTCCATGTGCGGACAAATATCCGGATAAACACACGACAAACGGCGACAAGTTTGTTCAGCGCGTGGCGATTTGCAGCGCAACA > SRR4302543.3641803/1‑94 (MQ=60)
CGTGGTTCGTGTCCATGTGCGGACAAATATCCGGATAAACACACGACAAACGGCGACAAGTTTGTTCAGCGCGTGGCGATTTGCAGCGCAACAT < SRR4302543.4209211/94‑1 (MQ=60)
GTGGTTCGTGTCCATGTGCGGACAAATATCCGGATAAACACACGACAAACGGCGACAAGTTTGTTCAGCGCGTGGCGATTTGCAGCGCAACATA > SRR4302543.5035062/1‑94 (MQ=60)
GTGGTTCGTGTCCATGTGCGGACAAATATCCGGATAAACACACGACAAACGGCGACAAGTTTGTTCAGCGCGTGGCGATTTGCAGCGCAACATA < SRR4302543.5618178/94‑1 (MQ=60)
TGGTTCGTGTCCATGTGCGGACAAATATCCGGATAAACACACGACAAACGGCGACAAGTTTGTTCAGCGCGTGGCGATTTGCAGCGCAACATAT < SRR4302543.4284797/94‑1 (MQ=60)
TGGTTCGTGTCCATGTGCGGACAAATATCCGGATAAACACACGACAAACGGCGACAAGTTTGTTCAGCGCGTGGCGATTTGCAGCGCAACATAT < SRR4302543.2360181/94‑1 (MQ=60)
GGTTCGTGTCCATGTGCGGACAAATATCCGGATAAACACACGACAAACGGCGACAAGTTTGTTCAGCGCGTGGCGATTTGCAGCGCAACATATA > SRR4302543.71004/1‑94 (MQ=60)
GGTTCGTGTCCATGTGCGGACAAATATCCGGATAAACACACGACAAACGGCGACAAGTTTGTTCAGCGCGTGGCGATTTGCAGCGCAACATATA > SRR4302543.7390960/1‑94 (MQ=60)
GGTTCGTGTCCATGTGCGGACAAATATCCGGATAAACACACGACAAACGGCGACAAGTTTGTTCAGCGCGTGGCGATTTGCAGCGCAACATATA < SRR4302543.6714986/94‑1 (MQ=60)
GTTCGTGTCCATGTGCGGACAAATATCCGGATAAACACACGACAAACGGCGACAAGTTTGTTCAGCGCGTGGCGATTTGCAGCGCAACATATAC > SRR4302543.4676241/1‑94 (MQ=60)
GTTCGTGTCCATGTGCGGACAAATATCCGGATAAACACACGACAAACGGCGACAAGTTTGTTCAGCGCGTGGCGATTTGCAGCGCAACATATAC < SRR4302543.5082127/94‑1 (MQ=60)
TTCGTGTCCATGTGCGGACAAATATCCGGATAAACACACGACAAACGGCGACAAGTTTGTTCAGCGCGTGGCGATTTGCAGCGCAACATATACA < SRR4302543.2527156/94‑1 (MQ=60)
TTCGTGTCCATGTGCGGACAAATATCCGGATAAACACACGACAAACGGCGACAAGTTTGTTCAGCGCGTGGCGATTTGCAGCGCAACATATACA < SRR4302543.779315/94‑1 (MQ=60)
TTCGTGTCCATGTGCGGACAAATATCCGGATAAACACACGACAAACGGCGACAAGTTTGTTCAGCGCGTGGCGATTTGCAGCGCAACATATACA < SRR4302543.4396462/94‑1 (MQ=60)
TTCGTGTCCATGTGCGGACAAATATCCGGATAAACACACGACAAACGGCGACAAGTTTGTTCAGCGCGTGGCGATTTGCAGCGCAACATATACA < SRR4302543.5724812/94‑1 (MQ=60)
TCGTGTCCATGTGCGGACAAATATCCGGATAAACGCACGACAAACGGCGACAAGTTTGTTCAGCGCGTGGCGATTTGCAGCGCAACATATACAT < SRR4302543.5077705/94‑1 (MQ=60)
GTGTCCATGTGCGGACAAATATCCGGATAAACACACGACAAACGGCGACAAGTTTGTTCAGCGCGTGGCGATTTGCAGCGCAACATATACATGT > SRR4302543.2325282/1‑94 (MQ=60)
TGTCCATGTGCGGACAAATATCCGGATAAACACACGACAAACGGCGACAAGTTTGTTCAGCGCGTGGCGATTTGCAGCGCAACATATACATGTT < SRR4302543.7467480/94‑1 (MQ=60)
TGTCCATGTGCGGACAAATATCCGGATAAACACACGACAAACGGCGACAAGTTTGTTCAGCGCGTGGCGATTTGCAGCGCAACATATACATGTT > SRR4302543.5710402/1‑94 (MQ=60)
TGTCCATGTGCGGACAAATATCCGGATAAACACACGACAAACGGCGACAAGTTTGTTCAGCGCGTGGCGATTTGCAGCGCAACATATACATGTT < SRR4302543.1113085/94‑1 (MQ=60)
GTCCATGTGCGGACAAATATCCGGATAAACACACGACAAACGGCGACAAGTTTGTTCAGCGCGTGGCGATTTGCAGCGCAACATATACATGTTG < SRR4302543.6666749/94‑1 (MQ=60)
GTCCATGTGCGGACAAATATCCGGATAAACACACGACAAACGGCGACAAGTTTGTTCAGCGCGTGGCGATTTGCAGCGCAACATATACATGTTG < SRR4302543.7352426/94‑1 (MQ=60)
GTCCATGTGCGGACAAATATCCGGATAAACACACGACAAACGGCGACAAGTTTGTTCAGCGCGTGGCGATTTGCAGCGCAACATATACATGTTG > SRR4302543.5916312/1‑94 (MQ=60)
GTCCATGTGCGGACAAATATCCGGATAAACACACGACAAACGGCGACAAGTTTGTTCAGCGCGTGGCGATTTGCAGCGCAACATATACATGTTG > SRR4302543.5916311/1‑94 (MQ=60)
GTCCATGTGCGGACAAATATCCGGATAAACACACGACAAACGGCGACAAGTTTGTTCAGCGCGTGGCGATTTGCAGCGCAACATATACATGTTG < SRR4302543.7407641/94‑1 (MQ=60)
GTCCATGTGCGGACAAATATCCGGATAAACACACGACAAACGGCGACAAGTTTGTTCAGCGCGTGGCGATTTGCAGCGCAACATATACATGTTG < SRR4302543.7511910/94‑1 (MQ=60)
GTCCATGTGCGGACAAATATCCGGATAAACACACGACAAACGGCGACAAGTTTGTTCAGCGCGTGGCGATTTGCAGCGCAACATATACATGTTG < SRR4302543.7511911/94‑1 (MQ=60)
TCCATGTGCGGACAAATATCCGGATAAACACACGACAAACGGCGACAAGTTTGTTCAGCGCGTGGCGATTTGCAGCGCAACATATACATGTTGG > SRR4302543.582529/1‑94 (MQ=60)
TCCATGTGCGGACAAATATCCGGATAAACACACGACAAACGGCGACAAGTTTGTTCAGCGCGTGGCGATTTGCAGCGCAACATATACATGTTGG < SRR4302543.3685234/94‑1 (MQ=60)
CCATGTGCGGACAAATATCCGGATAAACGCACGACAAACGGCGACAAGTTTGTTCAGCGCGTGGCGATTTGCAGCGCAACATATACATGTTGGC < SRR4302543.5041056/94‑1 (MQ=60)
CCATGTGCGGACAAATATCCGGATAAACACACGACAAACGGCGACAAGTTTGTTCAGCGCGTGGCGATTTGCAGCGCAACATATACATGTTGGC > SRR4302543.6603722/1‑94 (MQ=60)
CCATGTGCGGACAAATATCCGGATAAACACACGACAAACGGCGACAAGTTTGTTCAGCGCGTGGCGATTTGCAGCGCAACATATACATGTTGGC < SRR4302543.5509004/94‑1 (MQ=60)
CCATGTGCGGACAAATATCCGGATAAACACACGACAAACGGCGACAAGTTTGTTCAGCGCGTGGCGATTTGCAGCGCAACATATACATGTTGGC > SRR4302543.7923978/1‑94 (MQ=60)
CCATGTGCGGACAAATATCCGGATAAACACACGACAAACGGCGACAAGTTTGTTCAGCGCGTGGCGATTTGCAGCGCAACATATACATGTTGGC < SRR4302543.883641/94‑1 (MQ=60)
CCATGTGCGGACAAATATCCGGATAAACACACGACAAACGGCGACAAGTTTGTTCAGCGCGTGGCGATTTGCAGCGCAACATATACATGTTGGC < SRR4302543.4251178/94‑1 (MQ=60)
CCATGTGCGGACAAATATCCGGATAAACACACGACAAACGGCGACAAGTTTGTTCAGCGCGCGGCGATTTGCAGCGAAACATATACATGTTGGC > SRR4302543.7923977/1‑94 (MQ=60)
CATGTGCGGACAAATATCCGGATAAACACACGACAAACGGCGACAAGTTTGTTCAGCGCGTGGCGATTTGCAGCGCAACATATACATGTTGGCA > SRR4302543.3884844/1‑94 (MQ=60)
ATGTGCGGACAAATATCCGGATAAACACACGACAAACGGCGACAAGTTTGTTCAGCGCGTGGCGATTTGCAGCGCAACATATACATGTTGGCAG > SRR4302543.2361503/1‑94 (MQ=60)
TGTTCGGACAAATATCCGGATAAACACACGACAAACGGCGACAAGTTTGTTCAGCGCGTGGCGATTTGCAGCGCAACATATACATGTTGGCAGT < SRR4302543.2356014/94‑1 (MQ=60)
GTGCGGACAAATATCCGGATAAACACACGACAAACGGCGACAAGTTTGTTCAGCGCGTGGCGATTTGCAGCGCAACATATACATGTTGGCAGTT < SRR4302543.4273154/94‑1 (MQ=60)
GTGCGGACAAATATCCGGATAAACACACGACAAACGGCGACAAGTTTGTTCAGCGCGTGGCGATTTGCAGCGCAACATATACATGTTGGCAGTT < SRR4302543.3466701/94‑1 (MQ=60)
TGCGGACAAATATCCGGATAAACACACGACAAACGGCGACAAGTTTGTTCAGCGCGTGGCGATTTGCAGCGCACCATATAAATGTTGGCAGTTG > SRR4302543.778390/1‑94 (MQ=60)
TGCGGACAAATATCCGGATAAACACACGACAAACGGCGACAAGTTTGTTCAGCGCGTGGCGATTTGCAGCGCAACATATACATGTTGGCAGTTG < SRR4302543.2613253/94‑1 (MQ=60)
TGCGGACAAATATCCGGATAAACACACGACAAACGGCGACAAGTTTGTTCAGCGCGTGGCGATTTGCAGCGCAACATATACATGTTGGCAGTTG < SRR4302543.2610202/94‑1 (MQ=60)
TGCGGACAAATATCCGGATAAACACACGACAAACGGCGACAAGTTTGTTCAGCGCGTGGCGATTTGCAGCGCAACATATACATGTTGGCAGTTG < SRR4302543.2792425/94‑1 (MQ=60)
TGCGGACAAATATCCGGATAAACACACGACAAACGGCGACAAGTTTGTTCAGCGCGTGGCGATTTGCAGCGCAACATATACATGTTGGCAGTTG < SRR4302543.804745/94‑1 (MQ=60)
GCGGACAAATATCCGGATAAACACACGACAAACGGCGACAAGTTTGTTCAGCGCGTGGCGATTTGCAGCGCAACATATACATGTTGGCAGTTGG < SRR4302543.1560151/94‑1 (MQ=60)
GCGGACAAATATCCGGATAAACACACGACAAACGGCGACAAGTTTGTTCAGCGCGTGGCGATTTGCAGCGCAACATATACATGTTGGCAGTTGG < SRR4302543.2903644/94‑1 (MQ=60)
GCGGACAAATATCCGGATAAACACACGACAAACGGCGACAAGTTTGTTCAGCGCGTGGCGATTTGCAGCGCAACATATACATGTTGGCAGTTGG < SRR4302543.3361553/94‑1 (MQ=60)
ACAAATATCCGGATAAACACACGACAAACGGCGACAAGTTTGTTCAGCGCGTGGCGATTTGCAGCGCAACATATACATGTTGGCAGTTGGCCCA > SRR4302543.670071/1‑94 (MQ=60)
CAAATATCCGGATAAACACACGACAAACGGCGACAAGTTTGTTCAGCGCGTGGCGATTTGCAGCGCAACATATACATGTTGGCAGTTGGCCCAC > SRR4302543.530013/1‑94 (MQ=60)
CAAATATCCGGATAAACACACGACAAACGGCGACAAGTTTGTTCAGCGCGTGGCGATTTGCAGCGCAACATATACATGTTGGCAGTTGGCCCAC > SRR4302543.6611441/1‑94 (MQ=60)
ATATCCGGATAAACACACGACAAACGGCGACAAGTTTGTTCAGCGCGTGGCGATTTGCAGCGCAACATATACATGTTGGCAGTTGGCCCACCAA > SRR4302543.1772971/1‑94 (MQ=60)
ATATCCGGATAAACACACGACAAACGGCGACAAGTTTGTTCAGCGCGTGGCGATTTGCAGCGCAACATATACATGTTGGCAGTTGGCCCACCAA > SRR4302543.7100145/1‑94 (MQ=60)
TATCCGGATAAACACACGACAAACGGCGACAAGTTTGTTCAGCGCGTGGCGATTTGCAGCGCAACATATACATGTTGGCAGTTGGCCCACCAAG < SRR4302543.7999910/94‑1 (MQ=60)
ATCCGGATAAACACACGACAAACGGCGACAAGTTTGTTCCGCGCGTGGCGATTTGCAGCGCAACATATACATGTTGGCCGTTGGCCCCCCACGA > SRR4302543.641021/1‑94 (MQ=60)
ATCCGGATAAACACACGACAAACGGCGACAAGTTTGTTCAGCGCGTGGCGATTTGCAGCGCAACATATACATGTTGGCAGTTGGCCCACCAAGA > SRR4302543.3523735/1‑94 (MQ=60)
ATCCGGATAAACACACGACAAACGGCGACAAGTTTGTTCAGCGCGTGGCGATTTGCAGCGCAACATATACATGTTGGCAGTTGGCCCACCAAGA > SRR4302543.371103/1‑94 (MQ=60)
TCCGGATAAACACACGACAAACGGCGACAAGTTTGTTCAGCGCGTGGCGATTTGCAGCGCAACATATACATGTTGGCAGTTGGCCCACCAAGAT < SRR4302543.6596417/94‑1 (MQ=60)
TCCGGATAAACACACGACAAACGGCGACAAGTTTGTTCAGCGCGTGGCGATTTGCAGCGCAACATATACATGTTGGCAGTTGGCCCACCAAGAT < SRR4302543.2730989/94‑1 (MQ=60)
TCCGGATAAACACACGACAAACGGCGACAAGTTTGTTCAGCGCGTGGCGATTTGCAGCGCAACATATACATGTTGGCAGTTGGCCCACCAAGAT < SRR4302543.5462158/94‑1 (MQ=60)
CCGGATAAACACACGACAAACGGCGACAAGTTTGTTCAGCGCGTGGCGATTTGCAGCGCAACATATACATGTTGGCAGTTGGCCCACCAAGATC < SRR4302543.847989/94‑1 (MQ=60)
CCGGATAAACACACGACAAACGGCGACAAGTTTGTTCAGCGCGTGGCGATTTGCAGCGCAACATATACATGTTGGCAGTTGGCCCACCAAGATA < SRR4302543.5454370/94‑1 (MQ=60)
CGGATAAACACACGACAAACGGCGACAAGTTTGTTCAGCGCGTGGCGATTTGCAGCGCAACATATACATGTTGGCAGTTGGCCCACCAAGATCG > SRR4302543.1458076/1‑94 (MQ=60)
CGGATAAACACACGACAAACGGCGACAAGTTTGTTCAGCGCGTGGCGATTTGCAGCGCAACATATACATGTTGGCAGTTGGCCCACCAAGATCG < SRR4302543.4596456/94‑1 (MQ=60)
CGGATAAACACACGACAAACGGCGACAAGTTTGTTCAGCGCGTGGCGATTTGCAGCGCAACATATACATGTTGGCAGTTGGCCCACCAAGATCG > SRR4302543.3432615/1‑94 (MQ=60)
GGATAAACACACGACAAACGGCGACAAGTTTGTTCAGCGCGTGGCGATTTGCAGCGCAACATATACATGTTGGCAGTTGGCCCACCAAGATCGG > SRR4302543.1380352/1‑94 (MQ=60)
ATAAACACACGACAAACGGCGACAAGTTTGTTCAGCGCGTGGCGATTTGCAGCGCAACATATACATGTTGGCAGTTGGCCCCCCCAGATCGGAA > SRR4302543.3045719/1‑94 (MQ=60)
ATAAACACACGACAAACGGCGACAAGTTTGTTCAGCGCGTGGCGATTTGCAGCGCAACATATACATGTTGGCAGTTGGCCCACCAAGATCGGAA > SRR4302543.3045718/1‑94 (MQ=60)
TAAACACACGACAAACGGCGACAAGTTTGTTCAGCGCGTGGCGATTTGCAGCGCAACATATACATGTTGGCAGTTGGCCCACCAAGATCGGAAA > SRR4302543.5573483/1‑94 (MQ=60)
AAACACACGACAAACGGCGACAAGTTTGTTCAGCGCGTGGCGATTTGCAGCGCAACATATACATGTTGGCAGTTGGCCCACCAAGATCGGAAAT < SRR4302543.1028384/94‑1 (MQ=60)
AAACACACGACAAACGGCGACAAGTTTGTTCAGCGCGTGGCGATTTGCAGCGCAACATATACATGTTGGCAGTTGGCCCACCAAGATCGGAAAT > SRR4302543.5627316/1‑94 (MQ=60)
AAACACACGACAAACGGCGACAAGTTTGTTCAGCGCGTGGCGATTTGCAGCGCAACATATACATGTTGGCAGTTGGCCCACCAAGATCGGAAAT < SRR4302543.663777/94‑1 (MQ=60)
AACACACGACAAACGGCGACAAGTTTGTTCAGCGCGTGGCGATTTGCAGCGCAACATATACATGTTGGCAGTTGGCCCACCAAGATCGGAAATC < SRR4302543.5319611/94‑1 (MQ=60)
ACACACGACAAACGGCGACAAGTTTGTTCAGCGCGTGGCGATTTGCAGCGCAACATATACATGTTGGCAGTTGGCCCACCAAGATCGGAAATCA > SRR4302543.5456272/1‑94 (MQ=60)
ACACACGACAAACGGCGACAAGTTTGTTCAGCGCGTGGCGATTTGCAGCGCAACATATACATGTTGGCAGTTGGCCCACCAAGATCGGAAATCA < SRR4302543.5592892/94‑1 (MQ=60)
ACACACGACAAACGGCGACAAGTTTGTTCAGCGCGTGGCGATTTGCAGCGCAACATATACATGTTGGCAGTTGGCCCACCAAGATCGGAAATCA < SRR4302543.5592893/94‑1 (MQ=60)
ACACACGACAAACGGCGACAAGTTTGTTCAGCGCGTGGCGATTTGCAGCGCAACATATACATGTCGGCAGTTGGCCCACCAAGATCGGAAATCA > SRR4302543.5041416/1‑94 (MQ=60)
ACACGACAAACGGCGACAAGTTTGTTCAGCGCGTGGCGATTTGCAGCGCAACATATACATGTTGGCAGTTGGCCCACCAAGATCGGAAATCACG > SRR4302543.5321001/1‑94 (MQ=60)
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CTTTTTAATGCCTTTCAGATCACGCGCACGGCGATAGAGGTTGATCGTTGGTTCGTGGTTCGTGTCCATGTGCGGACAAATATCCGGATAAACGCACGACAAACGGCGACAAGTTTGTTCAGCGCGTGGCGATTTGCAGCGCAACATATACATGTTGGCAGTTGGCCCACCAAGATCGGAAATCACG > NC_000913/3157697‑3157883
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| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 2 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
