Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A1 F1 I1 R1 1696 279.3 15874187 97.8% 15524954 93.0

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 3,164,677 T→C K353R (AAG→AGG)  b3020 ← putative transport periplasmic protein

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009133,164,6770TC100.0% 937.1 / NA 292K353R (AAG→AGG) b3020putative transport periplasmic protein
Reads supporting (aligned to +/- strand):  ref base T (0/0);  new base C (134/158);  total (134/158)

Only 100 of 313 total aligned reads displayed.

TAGAACAGCTCAAAGCGTAGCGGATGAGAGGCGTCGTATCCCGCCTGTTTCAGCAAGGCTTTTGCCATCGCGACGCGCTCACTCATTGGCTTTTGCAGTTCATCGAACGTCGTCGCGCTAAAGCCTTTTACCTCTGGCGGCGTCAGCGTGGTTGCGGGCGTTCTCAACCCCAGTACCTTT  >  NC_000913/3164587‑3164766
                                                                                          |                                                                                         
tAGAACAGCTCAAAGCGTAGCGGATGAGAGGCGTCGTATCCCGCCTGTTTCAGCAAGGCTTTTGCCATCGCGACGCGCTCACTCATTGGCctt                                                                                         >  1:5349927/1‑93 (MQ=255)
tAGAACAGCTCAAAGCGTAGCGGATGAGAGGCGTCGTATCCCGCCTGTTTCAGCAAGGCTTTTGCCATCGCGACGCGCTCACTCATTGGCctt                                                                                         >  1:897850/1‑93 (MQ=255)
tAGAACAGCTCAAAGCGTAGCGGATGAGAGGCGTCGTATCCCGCCTGTTTCAGCAAGGCTTTTGCCATCGCGACGCGCTCACTCATTGGCctt                                                                                         <  1:6451138/93‑1 (MQ=255)
 aGAACAGCTCAAAGCGTAGCGGATGAGAGGCGTCGTACCCCGCCTGTTTCAGCAAGGCTTTTGCCATCGCGACGCGCTCACTCATTGGCcttt                                                                                        <  2:3401126/93‑1 (MQ=255)
   aaCAGCTCAAAGCGTAGCGGATGAGAGGCGTCGTATCCCGCCTGTTTCAGCAAGGCTTTTGCCATCGCGACGCGCTCACTCATTGGCCTTTGc                                                                                      <  1:7117283/93‑1 (MQ=255)
   aaCAGCTCAAAGCGTAGCGGATGAGAGGCGTCGTATCCCGCCTGTTTCAGCAAGGCTTTTGCCATCGCGACGCGCTCACTCATTGGCCTTTGc                                                                                      >  2:6741784/1‑93 (MQ=255)
    aCAGCTCAAAGCGTAGCGGATGAGAGGCGTCGTATCCCGCCTGTTTCAGCAAGGCTTTTGCCATCGCGACGCGCTCACTCATTGGCCTTTGCa                                                                                     <  1:7869583/93‑1 (MQ=255)
      aGCTCAAAGCGTAGCGGATGAGAGGCGTCGTATCCCGCCTGTTTCAGCAAGGCTTTTGCCATCGCGACGCGCTCACTCATTGGCCTTTGCAGt                                                                                   >  1:4088755/1‑93 (MQ=255)
       gCTCAAAGCGTAGCGGATGAGAGGCGTCGTATCCCGCCTGTTTCAGCAAGGCTTTTGCCATCGCGACGCGCTCACTCATTGGCCTTTGCAGtt                                                                                  <  2:6429563/93‑1 (MQ=255)
       gCTCAAAGCGTAGCGGATGAGAGGCGTCGTATCCCGCCTGTTTCAGCAAGGCTTTTGCCATCGCGACGCGCTCACTCATTGGCCTTTGCAGtt                                                                                  <  2:1765107/93‑1 (MQ=255)
         tCAAAGCGTAGCGGATGAGAGGCGTCGTATCCCGCCTGTTTCAGCAAGGCTTTTGCCATCGCGACGCGCTCACTCATTGGCCTTTGCAGTTCa                                                                                >  1:5750960/1‑93 (MQ=255)
         tCAAAGCGTAGCGGATGAGAGGCGTCGTATCCCGCCTGTTTCAGCAAGGCTTTTGCCATCGCGACGCGCTCACTCATTGGCCTTTGCAGTTCa                                                                                >  2:7471291/1‑93 (MQ=255)
         tCAAAGCGTAGCGGATGAGAGGCGTCGTATCCCGCCTGTTTCAGCAAGGCTTTTGCCATCGCGACGCGCTCACTCATTGGCCTTTGCAGTTCa                                                                                >  1:3941192/1‑93 (MQ=255)
         tCAAAGCGTAGCGGATGAGAGGCGTCGTATCCCGCCTGTTTCAGCAAGGCTTTTGCCATCGCGACGCGCTCACTCATTGGCCTTTGCAGTTCa                                                                                <  2:1677891/93‑1 (MQ=255)
          taaaGCCTAGCGCATGAGAGGGGTCGTATCCCGCCTGTTTCAGCAAGGCTTTTGCCATCGCGACGCGCTCACTCATTGGCCTTTGCAGTTCAt                                                                               <  1:4474173/92‑1 (MQ=255)
          cAAAGCGTAGCGGATGAGAGGCGTCGTATCCCGCCTGTTTCAGCAAGGCTTTTGCCATCGCGACGCGCTCACTCATTGGCCTTTGCAGTTCAt                                                                               <  2:1893515/93‑1 (MQ=255)
          cAAAGCGTAGCGGATGAGAGGCGTCGTATCCCGCCTGTTTCAGCAAGGCTTTTGCCATCGCGACGCGCTCACTCATTGGCCTTTGCAGTTCAt                                                                               <  2:4621393/93‑1 (MQ=255)
          cAAAGCGTAGCGGATGAGAGGCGTCGTATCCCGCCTGTTTCAGCAAGGCTTTTGCCATCGCGACGCGCTCACTCATTGGCCTTTGCAGTTCAt                                                                               <  1:1807646/93‑1 (MQ=255)
          cAAAGCGTAGCGGATGAGAGGCGTCGTATCCCGCCTGTTTCAGCAAGGCTTTTGCCATCGCGACGCGCTCACTCATTGGCCTTTGCAGTTCAt                                                                               <  1:1040902/93‑1 (MQ=255)
            aaGCGTAGCGGATGAGAGGCGTCGTATCCCGCCTGTTTCAGCAAGGCTTTTGCCATCGCGACGCGCTCACTCATTGGCCTTTGCAGTTCATCg                                                                             >  2:5444202/1‑93 (MQ=255)
            aaGCGTAGCGGATGAGAGGCGTCGTATCCCGCCTGTTTCAGCAAGGCTTTTGCCATCGCGACGCGCTCACTCATTGGCCTTTGCAGTTCATCg                                                                             <  1:4862176/93‑1 (MQ=255)
            aaGCGTAGCGGATGAGAGGCGTCGTATCCCGCCTGTTTCAGCAAGGCTTTTGCCATCGCGACGCGCTCACTCATTGGCCTTTGCAGTTCATCg                                                                             <  1:4304927/93‑1 (MQ=255)
              gCGTAGCGGATGAGAGGCGTCGTATCCCGCCTGTTTCAGCAAGGCTTTTGCCATCGCGACGCGCTCACTCATTGGCCTTTGCAGTTCATCGaa                                                                           <  2:3935890/93‑1 (MQ=255)
              gCGTAGCGGATGAGAGGCGTCGTATCCCGCCTGTTTCAGCAAGGCTTTTGCCATCGCGACGCGCTCACTCATTGGCCTTTGCAGTTCATCGaa                                                                           <  1:6345822/93‑1 (MQ=255)
               cGTAGCGGATGAGAGGCGTCGTATCCCGCCTGTTTCAGCAAGGCTTTTGCCATCGCGACGCGCTCACTCATTGGCCTTTGCAGTTCATCGAAc                                                                          <  1:1349805/93‑1 (MQ=255)
                 tAGCGGATGAGAGGCGTCGTATCCCGCCTGTTTCAGCAAGGCTTTTGCCATCGCGACGCGCTCACTCATTGGCCTTAGCAGTTCATCCAAcgt                                                                        >  1:6102868/1‑93 (MQ=255)
                  aGCGGATGAGAGGCGTCGTATCCCGCCTGTTTCAGCAAGGCTTTTGCCATCGCGACGCGCTCACTCATTGGCCTTTGCAGTTCATCGAAcgtc                                                                       <  2:2957144/93‑1 (MQ=255)
                  aGCGGATGAGAGGCGTCGTATCCCGCCTGTTTCAGCAAGGCTTTTGCCATCGCGACGCGCTCACTCATTGGCCTTTGCAGTTCATCGAAcgtc                                                                       <  2:3308473/93‑1 (MQ=255)
                    cGGATGAGAGGCGTCGTATCCCGCCTGTTTCAGCAAGGCTTTTGCCATCGCGACGCGCTCACTCATTGGCCTTTGCAGTTCATCGAAcgtcgt                                                                     <  2:5847693/93‑1 (MQ=255)
                     ggATGAGAGGCGTCGTATCCCGCCTGTTTCAGCAAGGCTTTTGCCATCGCGACGCGCTCACTCATTGGCCTTTGCAGTTCATCGAACgtcgtc                                                                    <  2:3006817/93‑1 (MQ=255)
                      gATGAGAGGCGTCGTATCCCGCCTGTTTCAGCAAGGCTTTTGCCATCGCGACGCGCTCACTCATTGGCCTTTGCAGTTCATCGAACGtcgtcg                                                                   >  1:1489128/1‑93 (MQ=255)
                       aTGAGAGGCGTCGTATCCCGCCTGTTTCAGCAAGGCTTTTGCCATCGCGACGCGCTCACTCATTGGCCTTTGCAGTTCATCGAACGTCGTcgc                                                                  >  2:4221097/1‑93 (MQ=255)
                         gagaGGCGTCGTATCCCGCCTGTTTCAGCAAGGCTTTTGCCATCGCGACGCGCTCACTCATTGGCCTTTGCAGTTCATCGAACGTCGTCgcgc                                                                <  1:6869461/93‑1 (MQ=255)
                            agGCGTCGTATCCCGCCTGTTTCAGCAAGGCTTTTGCCATCGCGACGCGCTCACTCATTGGCCTTTGCAGTTCATCGAACGTCGTCGCGCTaa                                                             >  2:3799944/1‑93 (MQ=255)
                            agGCGTCGTATCCCGCCTGTTTCAGCAAGGCTTTTGCCATCGCGACGCGCTCACTCATTGGCCTTTGCAGTTCATCGAACGTCGTCGCGCTaa                                                             <  2:5045079/93‑1 (MQ=255)
                             ggCGTCGTATCCCGCCTGTTTCAGCAAGGCTTTTGCCATCGCGACGCGCTCACTCATTGGCCTTTGCAGTTCATCGAACGTCGTCGCGCTaaa                                                            >  1:2509770/1‑93 (MQ=255)
                                gtcttACCCCGCCTGTTTCAGCAAGGCTTGTGCCATCGCGACGCGCTCACACATTGGCCTTTGCAGTTCATCGAACGTCGTCGCGCTAAAGcc                                                         <  2:4864925/93‑1 (MQ=255)
                                gtcgtATCCCGCCTGTTTCAGCAAGGCTTTTGCCATCGCGACGCGCTCACTCATTGGCCTTTGCAGTTCATCGAACGTCGTCGCGCTAAAGcc                                                         <  1:7762335/93‑1 (MQ=255)
                                 tcgtATCCCGCCTGTTTCAGCAAGGCTTTTGCCATCGCGACGCGCTCACTCATTGGCCTTTGCAGTTCATCGAACGTCGTCGCGCTAAAGCCt                                                        <  1:5020098/93‑1 (MQ=255)
                                   gtATCCCGCCTGTTTCAGCAAGGCTTTTGCCATCGCGACGCGCTCACTCATTGGCCTTTGCAGTTCATCGAACGTCGTCGCGCTAAAGCCttt                                                      <  2:2544982/93‑1 (MQ=255)
                                   gtATCCCGCCTGTTTCAGCAAGGCTTTTGCCATCGCGACGCGCTCACTCATTGGCCTTTGCAGTTCATCGAACGTCGTCGCGCTAAAGCCttt                                                      >  2:4471627/1‑93 (MQ=255)
                                    tATCCCGCCTGTTTCAGCAAGGCTTTTGCCATCGCGACGCGCTCACTCATTGGCCTTTGCAGTTCATCGAACGTCGTCGCGCTAAAGCCtttt                                                     <  1:983280/93‑1 (MQ=255)
                                     aTCCCGCCTGTTTCAGCAAGGCTTTTGCCATCGCGACGCGCTCACTCATTGGCCTTTGCAGTTCATCGAACGTCGTCGCGCTAAAGCCTTTTa                                                    >  1:7236912/1‑93 (MQ=255)
                                     aTCCCGCCTGTTTCAGCAAGGCTTTTGCCATCGCGACGCGCTCACTCATTGGCCTTTGCAGTTCATCGAACGTCGTCGCGCTAAAGCCTTTTa                                                    >  1:3715078/1‑93 (MQ=255)
                                      tCCCGCCTGTTTCAGCAAGGCTTTTGCCATCGCGACGCGCTCACTCATTGGCCTTTGCAGTTCATCGAACGTCGTCGCGCTAAAGCCTTTTAc                                                   >  2:3180481/1‑93 (MQ=255)
                                      tCCCGCCTGTTTCAGCAAGGCTTTTGCCATCGCGACGCGCTCACTCATTGGCCTTTGCAGTTCATCGAACGTCGTCGCGCTAAAGCCTTTTAc                                                   >  1:1735039/1‑93 (MQ=255)
                                       cccGCCTGTTTCAGCAAGGCTTTTGCCATCGCGACGCGCTCACTCATTGGCCTTTGCAGTTCATCGAACGTCGTCGCGCTAAAGCCTTTTAcc                                                  <  1:211777/93‑1 (MQ=255)
                                        ccGCCTGTTTCAGCAAGGCTTTTGCCATCGCGACGCGCTCACTCATTGGCCTTTGCAGTTCATCGAACGTCGTCGCGCTAAAGCCTTTTACct                                                 >  2:5255766/1‑93 (MQ=255)
                                         catcTGTTTCAGCAATGCTTTTGGCATCGCGACGCGCTCACTCATTGGCCTTTGCAGTTCATCGAACTTCGTCGCGCTAAAGCCTTTTACctc                                                <  2:102786/90‑1 (MQ=255)
                                         cGCCTGTTTCAGCAAGGCTTTTGCCATCGCGACGCGCTCACTCATTGGCCTTTGCATTTCATCGAACGTCGTCGCGCTAAAGCCTTTTACctc                                                <  2:6072670/93‑1 (MQ=255)
                                         cGCCTGTTTCAGCAAGGCTTTTGCCATCGCGACGCGCTCACTCATTGGCCTTTGCAGTTCATCGAACGTCGTCGCGCTAAAGCCTTTTACctc                                                <  1:4353529/93‑1 (MQ=255)
                                          gCCTGTTTCAGCAAGGCTTTTGCCATCGCGACGCGCTCACTCATTGGCCTTTGCAGTTCATCGAACGTCGTCGCGCTAAAGCCTTTTACctct                                               >  1:7349995/1‑93 (MQ=255)
                                          gCCTGTTTCAGCAAGGCTTTTGCCATCGCGACGCGCTCACTCATTGGCCTTTGCAGTTCATCGAACGTCGTCGCGCTAAAGCCTTTTACctct                                               <  1:2658589/93‑1 (MQ=255)
                                           tgtttttCAGCAAGGCTTTTGCTATCGCGACGCGCTCACTCATTGGCCTTTGCAGTTCATCGAACGTCGTCGCGCTAAAGCCTTTTACCTCTg                                              <  2:3878181/89‑1 (MQ=255)
                                           ccTGTTTCAGCAAGGCTTTTGCCATCGCGACGCGCTCACTCATTGGCCTTTGCAGTTCATCGAACGTCGTCGCGCTAAAGCCTTTTACCTCTg                                              <  2:6783736/93‑1 (MQ=255)
                                           ccTGTTTCAGCAAGGCTTTTGCCATCGCGACGCGCTCACTCATTGGCCTTTGCAGTTCATCGAACGTCGTCGCGCTAAAGCCTTTTACCTCTg                                              <  1:6647110/93‑1 (MQ=255)
                                            cTGTTTCAGCAAGGCTTTTGCCATCGCGACGCGCTCACTCATTGGCCTTTGCAGTTCATCGAACGTCGTCGCGCTAAAGCCTTTTACCTCTgg                                             <  1:6189667/93‑1 (MQ=255)
                                             tGTTTCAGCAAGGCTTTTGCCATCGCGACGCGCTCACTCATTGGCCTTTGCAGTTCATCGAACGTCGTCGCGCTAAAGCCTTTTACCTCTggc                                            >  1:7022874/1‑93 (MQ=255)
                                             tGTTTCAGCAAGGCTTTTGCCATCGCGACGCGCTCACTCATTGGCCTTTGCAGTTCATCGAACGTCGTCGCGCTAAAGCCTTTTACCTCTggc                                            >  1:6286010/1‑93 (MQ=255)
                                             tGTTGCAGCAAGGCTTTTGCCATCGCGACGCGCTCACACATAGGCCTGTGCAGTTCATCGAACGTCGTCGCGCTAAAGCCTTTTACCTCTggc                                            <  2:7136441/93‑1 (MQ=255)
                                              gTTTCAGCAAGGCTTTTGCCATCGCGACGCGCTCACTCATTGGCCCTTGCAGTTCACCGAACGTCGTCGCGCTAAAGCCTTTTACCTCCggcg                                           >  2:7001636/1‑93 (MQ=255)
                                               tttCAGCAAGGCTTTTGCCATCGCGACGCGCTCACTCATTGGCCTTTGCAGTTCATCGAACGTCGTCGCGCTAAAGCCTTTTACCTCTggcgg                                          >  1:2949298/1‑93 (MQ=255)
                                               tttCAGCAAGGCTTTTGCCATCGCGACGCGCTCACTCATTGGCCTTTGCAGTTCATCGAACGTCGTCGCGCTAAAGCCTTTTACCTCTggcgg                                          >  2:7670837/1‑93 (MQ=255)
                                                ttCAGCAAGGCTTTTGCCATCGCGACGCGCTCACTCATTGGCCTTTGCAGTTCATCGAACGTCGTCGCGCTAAAGCCTTTTACCTCTggcggc                                         <  2:3440230/93‑1 (MQ=255)
                                                   aGCAAGGCTTTTGCCATCGCGACGCGCTCACTCATTGGCCTTTGCAGTTCATCGAACGTCGTCGCGCTAAAGCCTTTTACCTCTGGCGGCGTc                                      >  1:4223167/1‑93 (MQ=255)
                                                    gCAAGGCTTTTGCCATCGCGACGCGCTCACTCATTGGCCTTTGCAGTTCATCGAACGTCGTCGCGCTAAAGCCTTTTACCTCTGGCGGCGTCa                                     <  1:6012194/93‑1 (MQ=255)
                                                    gCAAGGCTTTTGCCATCGCGACGCGCTCACTCATTGGCCTTTGCAGTTCATCGAACGTCGTCGCGCTAAAGCCTTTTACCTCTGGCGGCGTCa                                     >  1:350048/1‑93 (MQ=255)
                                                    gCAAGGCTTTTGCCATCGCGACGCGCTCACTCATTGGCCTTTGCAGTTCATCGAACGTCGTCGCGCTAAAGCCTTTTACCTCTGGCGGCGTCa                                     >  2:5646317/1‑93 (MQ=255)
                                                    gCAAGGCTTTTGCCATCGCGACGCGCTCACTCATTGGCCTTTGCAGTTCATCGAACGTCGTCGCGCTAAAGCCTTTTACCTCTGGCGGCGTCa                                     <  1:2410857/93‑1 (MQ=255)
                                                      aaGGCTTTTGCCATCGCGACGCGCTCACTCATTGGCCTTTGCAGTTCATCGAACGTCGTCGCGCTAAAGCCTTTTACCTCTGGCGGCGTCAGc                                   >  1:2158484/1‑93 (MQ=255)
                                                      aaGGCTTTTGCCATCGCGACGCGCTCACTCATTGGCCTTTGCAGTTCATCGAACGTCGTCGCGCTAAAGCCTTTTACCTCTGGCGGCGTCAGc                                   >  1:2327627/1‑93 (MQ=255)
                                                      aaGGCTTTTGCCATCGCGACGCGCTCACTCATTGGCCTTTGCAGTTCATCGAACGTCGTCGCGCTAAAGCCTTTTACCTCTGGCGGAGTCAga                                   >  2:2784566/1‑92 (MQ=255)
                                                      aaGGCTTTCGCCATCGCGCCCCGCTCACCCCTTGGCCTTTGCAGTTCATCGAACGTCGTCGCGCTAAAGCCTTTTACCTCTGGCGGCGTCAGc                                   <  2:7607294/93‑1 (MQ=255)
                                                       aGGCTTTTGCCATCGCGACGCGCTCACTCATTGGCCTTTGCAGTTCATCGAACGTCGTCGCGCTAAAGCCTTTTACCTCTGGCGGCGTCAGCg                                  >  1:599464/1‑93 (MQ=255)
                                                       aGGCTTTTGCCATCGCGACGCGCTCACTCATTGGCCTTTGCAGTTCATCGAACGTCGTCGCGCTAAAGCCTTTTACCTCTGGCGGCGTCAGCg                                  >  2:3522235/1‑93 (MQ=255)
                                                       aGGCTTTTGCCATCGCGACGCGCTCACTCATTGGCCTATGCAGTTCATCGAACGTCGTCGCGCTAAAGCCTTTTACCTCTGGCGGCGTCAGCg                                  <  2:1540682/93‑1 (MQ=255)
                                                        ggCTTTTGCCATCGCGACGCGCTCACTCATTGGCCTTTGCAGTTCATCGAACGTCGTCGCGCTAAAGCCTTTTACCTCTGGCGGCGTCAGCGt                                 <  2:1146667/93‑1 (MQ=255)
                                                        ggCTTTTGCCATCGCGACGCGCTCACTCATTGGCCTTTGCAGTTCATCGAACGTCGTCGCGCTAAAGCCTTTTACCTCTGGCGGCGTCAGCGt                                 >  1:3004555/1‑93 (MQ=255)
                                                          cTTTTGCCATCGCGACGCGCTCACTCATTGGCCTTTGCAGTTCATCGAACGTCGTCGCGCTAAAGCCTTTTACCTCTGGCGGCGTCAGCGTgg                               >  1:538502/1‑93 (MQ=255)
                                                           ttttGCCATCGCGACGCGCTCACTCATTGGCCTTTGCAGTTCATCGAACGTCGTCGCGCTAAAGCCTTTTACCTCTGGCGGCGTCAGCGTGGt                              <  1:4665721/93‑1 (MQ=255)
                                                           ttttGCCATCGCGACGCGCTCACTCATTGGCCTTTGCAGTTCATCGAACGTCGTCGCGCTAAAGCCTTTTACCTCTGGCGGCGTCAGCGTGGt                              <  1:283306/93‑1 (MQ=255)
                                                              tGCCATCGCGACGCGCTCACTCATTGGCCTTTGCAGTTCATCGAACGTCGTCGCGCTAAAGCCTTTTACCTCTGGCGGCGTCAGCGTGGTTGc                           <  2:5210642/93‑1 (MQ=255)
                                                                 cATCGCGACGCGCTCACTCATTGCCCTTTGCAGTTCATCGAACGTCGTCGCGCTAAAGCCTTTTACCTCTGGCGGCGTCAGCGTGGTTGCggg                        <  2:4354806/93‑1 (MQ=255)
                                                                   tCGCGACGCGCTCACTCATTGGCCTTTGCAGTTCATCGAACGTCGTCGCGCTAAAGCCTTTTACCTCTGGCGGCGTCAGCGTGGTTGCGGGCg                      >  2:2212384/1‑93 (MQ=255)
                                                                     gcgACGCGCTCACTCATTGGCCTTTGCAGTTCATCGAACGTCGTCGCGCTAAAGCCTTTTACCTCTGGCGGCGTCAGCGTGGTTGCGGGCGtt                    >  2:1974671/1‑93 (MQ=255)
                                                                     gcgACGCGCTCACTCATTGGCCTTTGCAGTTCATCGAACGTCGTCGCGCTAAAGCCTTTTACCTCTGGCGGCGTCAGCGTGGTTGCGGGCGtt                    >  2:1303566/1‑93 (MQ=255)
                                                                      cgACGCGCTCACTCATTGGCCTTTGCAGTTCATCGAACGTCGTCGCGCTAAAGCCTTTTACCTCTGGCGGCGTCAGCGTGGTTGCGGGCGTtc                   <  2:3355992/93‑1 (MQ=255)
                                                                       gACGCGCTCACTCATTGGCCTTTGCAGTTCATCGAACGTCGTCGCGCTAAAGCCTTTTACCTCTGGCGGCGTCAGCGTGGTTGCGGGCGTtct                  >  1:3888865/1‑93 (MQ=255)
                                                                        aCGCGCTCACTCATTGGCCTTTGCAGTTCATCGAACGTCGTCGCGCTAAAGCCTTTTACCTCTGGCGGCGTCAGCGTGGTTGCGGGCGTtctc                 <  1:198215/93‑1 (MQ=255)
                                                                         cgcgCTCACTCATTGGCCTTTGCAGTTCATCGAACGTCGTCGCGCTAAAGCCTTTTACCTCTGGCGGCGTCAGCGTGGTTGCGGGCGTTCTCa                <  1:7472617/93‑1 (MQ=255)
                                                                            gcTCACTCATTGGCCTTTGCAGTTCATCGAACGTCGTCGCGCTAAAGCCTTTTACCTCTGGCGGCGTCAGCGTGGTTGCGGGCGTTCTCAAcc             >  2:856241/1‑93 (MQ=255)
                                                                            gcTCACTCATTGGCCTTTGCAGTTCATCGAACGTCGTCGCGCTAAAGCCTTTTACCTCTGGCGGCGTCAGCGTGGTTGCGGGCGTTCTCAAcc             <  1:3273358/93‑1 (MQ=255)
                                                                             ctcagtcaTTGGCCTTTGCAGTTCATCGAACGTCGTTGCGCTTAAGCCTTTTACCTCTGGCGGCGTCAGCGTGGTTGCGGGCGTTCTCAAccc            <  1:5262160/93‑1 (MQ=255)
                                                                                   caTTGGCCTTTGCAGTTCATCGAACGTCGTCGCGCTAAAGCCTTTTACCTCTGGCGGCGTCAGCGTGGTTGCGGGCGTTCTCAACCCCAGTAc      >  2:1500093/1‑93 (MQ=255)
                                                                                   caTTGGCCTTTGCAGTTCATCGAACGTCGTCGCGCTAAAGCCTTTTACCTCTGGCGGCGTCAGCGTGGTTGCGGGCGTTCTCAACCCCAGTAc      >  2:2021341/1‑93 (MQ=255)
                                                                                   caTTGGCCTTTGCAGTTCATCGAACGTCGTCGCGCTAAAGCCTTTTACCTCTGGCGGCGTCAGCGTGGTTGCGGGCGTTCTCAACCCCAGTAc      >  2:5991705/1‑93 (MQ=255)
                                                                                    aTTGGCCTTTGCAGTTCATCGAACGTCGTCGCGCTAAAGCCTTTTACCTCTGGCGGCGTCAGCGTGGTTGCGGGCGTTCTCAACCCCAGTAcc     >  2:3771255/1‑93 (MQ=255)
                                                                                     ttGGCCTTTGCAGTTCATCGAACGTCGTCGCGCTAAAGCCTTTTACCTCTGGCGGCGTCAGCGTGGTTGCGGGCGTTCTCAACCCCAGTACCt    >  1:5887894/1‑93 (MQ=255)
                                                                                       ggCCTTTGCAGTTCATCGAACGTCGTCGCGCTAAAGCCTTTTACCTCTGGCGGCGTCAGCGTGGTTGCGGGCGTTCTCAACCCCAGTACCttt  <  2:2377911/93‑1 (MQ=255)
                                                                                       ggCCTTTGCAGTTCATCGAACGTCGTCGCGCTAAAGCCTTTTACCTCTGGCGGCGTCAGCGTGGTTGCGGGCGTTCTCAACCCCAGTACCttt  <  2:7817066/93‑1 (MQ=255)
                                                                                          |                                                                                         
TAGAACAGCTCAAAGCGTAGCGGATGAGAGGCGTCGTATCCCGCCTGTTTCAGCAAGGCTTTTGCCATCGCGACGCGCTCACTCATTGGCTTTTGCAGTTCATCGAACGTCGTCGCGCTAAAGCCTTTTACCTCTGGCGGCGTCAGCGTGGTTGCGGGCGTTCTCAACCCCAGTACCTTT  >  NC_000913/3164587‑3164766

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

BRESEQ :: bam2aln output
TGTAGAACAGCTCAAAGCGTAGCGGATGAGAGGCGTCGTATCCCGCCTGTTTCAGCAAGGCTTTTGCCATCGCGACGCGCTCACTCATTGGCTTTTGCAGTTCATCGAACGTCGTCGCGCTAAAGCCTTTTACCTCTGGCGGCGTCAGCGTGGTTGCGGGCGTTCTCAACCCCAGTACCTTTTGCG  >  NC_000913/3164585‑3164770
                                                                                            |                                                                                             
TGTAGAACAGCTCAAAGCGTAGCGGATGAGAGGCGTCGTATCCCGCCTGTTTCAGCAAGGCTTTTGCCATCGCGACGCGCTCACTCATTGGCCT                                                                                              >  SRR4302543.4602659/1‑94 (MQ=60)
TGTAGAACAGCTCAAAGCGTAGCGGATGAGAGGCGTCGTATCCCGCCTGTTTCAGCAAGGCTTTTGCCATCGCGACGCGCTCACTCATTGGCCT                                                                                              >  SRR4302543.7582144/1‑94 (MQ=60)
 GTAGAACAGCTCAAAGCGTAGCGGATGAGAGGCGTCGTATCCCGCCTGTTTCAGCAAGGCTTTTGCCATCGCGACGCGCTCACTCATTGGCCTT                                                                                             >  SRR4302543.2800499/1‑94 (MQ=60)
 GTAGAACAGCTCAAAGCGTAGCGGATGAGAGGCGTCGTATCCCGCCTGTTTCAGCAAGGCTTTTGCCATCGCGACGCGCTCACTCATTGGCCTT                                                                                             >  SRR4302543.905776/1‑94 (MQ=60)
 GTAGAACAGCTCAAAGCGTAGCGGATGAGAGGCGTCGTATCCCGCCTGTTTCAGCAAGGCTTTTGCCATCGCGACGCGCTCACTCATTGGCCTT                                                                                             <  SRR4302543.3592747/94‑1 (MQ=60)
 GTAGAACAGCTCAAAGCGTAGCGGATGAGAGGCGTCGTATCCCGCCTGTTTCAGCAAGGCTTTTGCCATCGCGACGCGCTCACTCATTGGCCTT                                                                                             >  SRR4302543.5398342/1‑94 (MQ=60)
 GTAGAACAGCTCAAAGCGTAGCGGATGAGAGGCGTCGTATCCCGCCTGTTTCAGCAAGGCTTTTGCCATCGCGACGCGCTCACTCATTGGCCTT                                                                                             <  SRR4302543.3592748/94‑1 (MQ=60)
  TAGAACAGCTCAAAGCGTAGCGGATGAGAGGCGTCGTATCCCGCCTGTTTCAGCAAGGCTTTTGCCATCGCGACGCGCTCACTCATTGGCCTTT                                                                                            <  SRR4302543.6511930/94‑1 (MQ=60)
  TAGAACAGCTCAAAGCGTAGCGGATGAGAGGCGTCGTATCCCGCCTGTTTCAGCAAGGCTTTTGCCATCGCGACGCGCTCACTCATTGGCCTTT                                                                                            <  SRR4302543.4157675/94‑1 (MQ=60)
   AGAACAGCTCAAAGCGTAGCGGATGAGAGGCGTCGTATCCCGCCTGTTTCAGCAAGGCTTTTGCCATCGCGACGCGCTCACTCATTGGCCTTTG                                                                                           <  SRR4302543.843211/94‑1 (MQ=60)
   AGAACAGCTCAAAGCGTAGCGGATGAGAGGCGTCGTATCCCGCCTGTTTCAGCAAGGCTTTTGCCATCGCGACGCGCTCACTCATTGGCCTTTG                                                                                           >  SRR4302543.1910845/1‑94 (MQ=60)
    GAACAGCTCAAAGCGTAGCGGATGAGAGGCGTCGTATCCCGCCTGTTTCAGCAAGGCTTTTGCCATCGCGACGCGCTCACTCATTGGCCTTTGC                                                                                          <  SRR4302543.5906482/94‑1 (MQ=60)
    GAACAGCTCAAAGCGTAGCGGATGAGAGGCGTCGTATCCCGCCTGTTTCAGCAAGGCTTTTGCCATCGCGACGCGCTCACTCATTGGCCTTTGC                                                                                          <  SRR4302543.7459463/94‑1 (MQ=60)
     AACAGCTCAAAGCGTAGCGGATGAGAGGCGTCGTATCCCGCCTGTTTCAGCAAGGCTTTTGCCATCTCGACGCGCTCACTCATTGGCCTTTGCA                                                                                         <  SRR4302543.3348675/94‑1 (MQ=60)
     AACAGCTCAAAGCGTAGCGGATGAGAGGCGTCGTATCCCGCCTGTTTCAGCAAGGCTTTTGCCATCGCGACGCGCTCACTCATTGGCCTTTGCA                                                                                         <  SRR4302543.7186425/94‑1 (MQ=60)
     AACAGCTCAAAGCGTAGCGGATGAGAGGCGTCGTATCCCGCCTGTTTCAGCAAGGCTTTTGCCATCGCGACGCGCTCACTCATTGGCCTTTGCA                                                                                         >  SRR4302543.2449412/1‑94 (MQ=60)
      ACAGCTCAAAGCGTAGCGGATGAGAGGCGTCGTATCCCGCCTGTTTCAGCAAGGCTTTTGCCATCGCGACGCGCTCACTCATTGGCCTTTGCAG                                                                                        <  SRR4302543.7943682/94‑1 (MQ=60)
       CAGCTCAAAGCGTAGCGGATGAGAGGCGTCGTATCCCGCCTGTTTCAGCAAGGCTTTTGCCATCGCGACGCGCTCACTCATTGGCCTTTGCAGT                                                                                       <  SRR4302543.1854172/94‑1 (MQ=60)
       CAGCTCAAAGCGTAGCGGATGAGAGGCGTCGTATCCCGCCTGTTTCAGCAAGGCTTTTGCCATCGCGACGCGCTCACTCATTGGCCTTTGCAGT                                                                                       >  SRR4302543.4125428/1‑94 (MQ=60)
       CAGCTCAAAGCGTAGCGGATGAGAGGCGTCGTATCCCGCCTGTTTCAGCAAGGCTTTTGCCATCGCGACGCGCTCACTCATTGGCCTTTGCAGT                                                                                       <  SRR4302543.4634891/94‑1 (MQ=60)
         GCTCAAAGCGTAGCGGATGAGAGGCGTCGTATCCCGCCTGTTTCAGCAAGGCTTTTGCCATCGCGACGCGCTCACTCGTTGGCCTTTGCAGTTC                                                                                     >  SRR4302543.4881906/1‑94 (MQ=60)
         GCTCAAAGCGTAGCGGATGAGAGGCGTCGTATCCCGCCTGTTTCAGCAAGGCTTTTGCCATCGCGACGCGCTCACTCATTGGCCTTTGCAGTTC                                                                                     >  SRR4302543.1528642/1‑94 (MQ=60)
         GCTCAAAGCGTAGCGGATGAGAGGCGTCGTATCCCGCCTGTTTCAGCAAGGCTTTTGCCATCGCGACGCGCTCACTCATTGGCCTTTGCAGTTC                                                                                     >  SRR4302543.5628551/1‑94 (MQ=60)
          CTCAAAGCGTAGCGGATGAGAGGCGTCGTATCCCGCCTGTTTCAGCAAGGCTTTTGCCATCGCGACGCGCTCACTCATTGGCCTTTGCAGTTCA                                                                                    >  SRR4302543.70437/1‑94 (MQ=60)
          CTCAAAGCGTAGCGGATGAGAGGCGTCGTATCCCGCCTGTTTCAGCAAGGCTTTTGCCATCGCGACGCGCTCACTCATTGGCCTTTGCAGTTCA                                                                                    <  SRR4302543.6498505/94‑1 (MQ=60)
          CTCAAAGCGTAGCGGATGAGAGGCGTCGTATCCCGCCTGTTTCAGCAAGGCTTTTGCCATCGCGACGCGCTCACTCATTGGCCTTTGCAGTTCA                                                                                    >  SRR4302543.5803379/1‑94 (MQ=60)
          CTCAAAGCGTAGCGGATGAGAGGCGTCGTATCCCGCCTGTTTCAGCAAGGCTTTTGCCATCGCGACGCGCTCACTCATTGGCCTTTGCAGTTCA                                                                                    >  SRR4302543.3976038/1‑94 (MQ=60)
           TCAAAGCGTAGCGGATGAGAGGCGTCGTATCCCGCCTGTTTCAGCAAGGCTTTTGCCATCGCGACGCGCTCACTCATTGGCCTTTGCAGTTCAT                                                                                   <  SRR4302543.7663758/94‑1 (MQ=60)
            tgagcggtaggGGATGAGAGGCGTCGTATCCCGCCTGTTTCAGCAAGGCTTTTGCCATCGCGACGCGCTCACTCATTGGCCTTTGCAGTTCATC                                                                                  <  SRR4302543.1050167/83‑1 (MQ=60)
            TAAAGCCTAGCGCATGAGAGGGGTCGTATCCCGCCTGTTTCAGCAAGGCTTTTGCCATCGCGACGCGCTCACTCATTGGCCTTTGCAGTTCATC                                                                                  <  SRR4302543.4514776/94‑1 (MQ=60)
            CAAAGCGTAGCGGATGAGAGGCGTCGTATCCCGCCTGTTTCAGCAAGGCTTTTGCCATCGCGACGCGCTCACTCATTGGCCTTTGCAGTTCATC                                                                                  <  SRR4302543.1050174/94‑1 (MQ=60)
            CAAAGCGTAGCGGATGAGAGGCGTCGTATCCCGCCTGTTTCAGCAAGGCTTTTGCCATCGCGACGCGCTCACTCATTGGCCTTTGCAGTTCATC                                                                                  <  SRR4302543.1823828/94‑1 (MQ=60)
             AAAGCGTAGCGGATGAGAGGCGTCGTATCCCGCCTGTTTCAGCAAGGCTTTTGCCATCGCGACGCGCTCACTCATTGGCCTTTGCAGTTCATCG                                                                                 <  SRR4302543.439662/94‑1 (MQ=60)
              AAGCGTAGCGGATGAGAGGCGTCGTATCCCGCCTGTTTCAGCAAGGCTTTTGCCATCGCGACGCGCTCACTCATTGGCCTTTGCAGTTCATCGA                                                                                <  SRR4302543.4344033/94‑1 (MQ=60)
              AAGCGTAGCGGATGAGAGGCGTCGTATCCCGCCTGTTTCAGCAAGGCTTTTGCCATCGCGACGCGCTCACTCATTGGCCTTTGCAGTTCATCGA                                                                                >  SRR4302543.6574256/1‑94 (MQ=60)
              AAGCGTAGCGGATGAGAGGCGTCGTATCCCGCCTGTTTCAGCAAGGCTTTTGCCATCGCGACGCGCTCACTCATTGGCCTTTGCAGTTCATCGA                                                                                <  SRR4302543.4906505/94‑1 (MQ=60)
               AGCGTAGCGGATGAGAGGCGTCGTATCCCGCCTGTTTCAGCAAGGCTTTTGCCATCGCGACGCGCTCACTCATTGGCCTTTGCAGTTCATCGAA                                                                               >  SRR4302543.3018575/1‑94 (MQ=60)
                GCGTAGCGGATGAGAGGCGTCGTATCCCGCCTGTTTCAGCAAGGCTTTTGCCATCGCGACGCGCTCACTCATTGGCCTTTGCAGTTCATCGAAC                                                                              <  SRR4302543.6405490/94‑1 (MQ=60)
                 GGTAGCGGATGAGAGGCGTCGTCTCCCGCCTGTTTCAGCAAGTCTTTTGCCATCGCGACGCGCTCACTCATTGGCCTTTGCAGTTCATCGAACG                                                                             <  SRR4302543.5399547/94‑1 (MQ=60)
                 CGTAGCGGATGAGAGGCGTCGTATCCCGCCTGTTTCAGCAAGGCTTTTGCCATCGCGACGCGCTCACTCATTGGCCTTTGCAGTTCATCGAACG                                                                             <  SRR4302543.7380502/94‑1 (MQ=60)
                 CGTAGCGGATGAGAGGCGTCGTATCCCGCCTGTTTCAGCAAGGCTTTTGCCATCGCGACGCGCTCACTCATTGGCCTTTGCAGTTCATCGAACG                                                                             <  SRR4302543.1361882/94‑1 (MQ=60)
                 CGTAGCGGATGAGAGGCGTCGTATCCCGCCTGTTTCAGCAAGGCTTTTGCCATCGCGACGCGCTCACTCATTGGCCTTTGCAGTTCATCGAACG                                                                             <  SRR4302543.1361880/94‑1 (MQ=60)
                  GTAGCGGATGAGAGGCGTCGTATCCCGCCTGTTTCAGCAAGGCTTTTGCCATCGCGACGCGCTCACTCATTGGCCTTTGCAGTTCATCGAACGT                                                                            >  SRR4302543.6731076/1‑94 (MQ=60)
                  GTAGCGGATGAGAGGCGTCGTATCCCGCCTGTTTCAGCAAGGCTTTTGCCATCGCGACGCGCTCACTCATTGGCCTTTGCAGTTCATCGAACGT                                                                            >  SRR4302543.6160691/1‑94 (MQ=60)
                  GTAGCGGATGAGAGGCGTCGTATCCCGCCTGTTTCAGCAAGGCTTTTGCCATCGCGACGCGCTCACTCATTGGCCTTTGCAGTTCATCGAACGT                                                                            >  SRR4302543.6160690/1‑94 (MQ=60)
                  GTAGCGGATGAGAGGCGTCGTATCCCGCCTGTTTCAGCAAGGCTTTTGCCATCGCGACGCGCTCACTCATTGGCCTTAGCAGTTCATCCAACGT                                                                            >  SRR4302543.6160692/1‑94 (MQ=60)
                   TAGCGGATGAGAGGCGTCGTATCCCGCCTGTTTCAGCAAGGCTTTTGCCATCGCGACGCGCTCACTCATTGGCCTTTGCAGTTCATCGAACGTC                                                                           <  SRR4302543.5304059/94‑1 (MQ=60)
                   TAGCGGATGAGAGGCGTCGTATCCCGCCTGTTTCAGCAAGGCTTTTGCCATCGCGACGCGCTCACTCATTGGCCTTTGCAGTTCATCGAACGTC                                                                           <  SRR4302543.705813/94‑1 (MQ=60)
                     GCGGATGAGAGGCGTCGTATCCCGCCTGTTTCAGCAAGGCTTTTGCCATCGCGACGCGCTCACTCATTGGCCTTTGCAGTTCATCGAACGTCGC                                                                         >  SRR4302543.6043994/1‑94 (MQ=60)
                      CGGATGAGAGGCGTCGTATCCCGCCTGTTTCAGCAAGGCTTTTGCCATCGCGACGCGCTCACTCATTGGCCTTTGCAGTTCATCGAACGTCGTC                                                                        <  SRR4302543.2388536/94‑1 (MQ=60)
                       GGATGAGAGGCGTCGTATCCCGCCTGTTTCAGCAAGGCTTTTGCCATCGCGACGCGCTCACTCATTGGCCTTTGCAGTTCATCGAACGTCGTCG                                                                       >  SRR4302543.2181854/1‑94 (MQ=60)
                       GGATGAGAGGCGTCGTATCCCGCCTGTTTCAGCAAGGCTTTTGCCATCGCGACGCGCTCACTCATTGGCCTTTGCAGTTCATCGAACGTCGTCG                                                                       >  SRR4302543.1502527/1‑94 (MQ=60)
                       GGATGAGAGGCGTCGTATCCCGCCTGTTTCAGCAAGGCTTTTGCCATCGCGACGCGCTCACTCATTGGCCTTTGCAGTTCATCGAACGTCGTCG                                                                       <  SRR4302543.3931587/94‑1 (MQ=60)
                        GATGGGAGGCGTCATATCCCGCCTGTTTCAGCAAGGCTTTTGCCATCGCGACGCGCTCACTCATTGGCCTTTGCAGTTCATCGAACGTCGTCGC                                                                      <  SRR4302543.7013463/94‑1 (MQ=60)
                        GATGAGAGGCGTCGTATCCCGCCTGTTTCAGCAAGGCTTTTGCCATCGCGACGCGCTCACTCATTGGCCTTTGCAGTTCATCGAACGTCGTCGC                                                                      >  SRR4302543.3855128/1‑94 (MQ=60)
                        GATGAGAGGCGTCGTATCCCGCCTGTTTCAGCAAGGCTTTTGCCATCGCGACGCGCTCACTCATTGGCCTTTGCAGTTCATCGAACGTCGTCGC                                                                      <  SRR4302543.5417125/94‑1 (MQ=60)
                         ATGAGAGGCGTCGTATCCCGCCTGTTTCAGCAAGGCTTTTGCCATCGCGACGCGCTCACTCATTGGCCTTTGCAGTTCATCGAACGTCGTCGCG                                                                     >  SRR4302543.7209114/1‑94 (MQ=60)
                         ATGAGAGGCGTCGTATCCCGCCTGTTTCAGCAAGGCTTTTGCCATCGCGACGCGCTCACTCATTGGCCTTTGCAGTTCATCGAACGTCGTCGCG                                                                     <  SRR4302543.4035760/94‑1 (MQ=60)
                          TGAGAGGCGTCGTATCCCGCCTGTTTCAGCAAGGCTTTTGCCATCGCGACGCGCTCACTCATTGGCCTTTGCAGTTCATCGAACGTCGTCGCGC                                                                    >  SRR4302543.1810479/1‑94 (MQ=60)
                           GAGAGGCGTCGTATCCCGCCTGTTTCAGCAAGGCTTTTGCCATCGCGACGCGCTCACTCATTGGCCTTTGCAGTTCATCGAACGTCGTCGCGCT                                                                   <  SRR4302543.6934156/94‑1 (MQ=60)
                            AGAGGCGTCGTATCCCGCCTGTTTCAGCAAGGCTTTTGCCATCGCGACGCGCTCACTCATTGGCCTTTGCAGTTCATCGAACGTCGTCGCGCTA                                                                  <  SRR4302543.5966343/94‑1 (MQ=60)
                              AGGCGTCGTATCCCGCCTGTTTCAGCAAGGCTTTTGCCATCGCGACGCGCTCACTCATTGGCCTTTGCAGTTCATCGAACGTCGTCGCGCTAAC                                                                >  SRR4302543.1418771/1‑94 (MQ=60)
                              AGGCGTCGTATCCCGCCTGTTTCAGCAAGGCTTTTGCCATCGCGACGCGCTCACTCATTGGCCTTTGCAGTTCATCGAACGTCGTCGCGCTAAA                                                                >  SRR4302543.2532553/1‑94 (MQ=60)
                              AGGCGTCGTATCCCGCCTGTTTCAGCAAGGCTTTTGCCATCGCGACGCGCTCACTCATTGGCCTTTGCAGTTCATCGAACGTCGTCGCGCTAAA                                                                >  SRR4302543.2112263/1‑94 (MQ=60)
                               GGCGTCGTATCCCGCCTGTTTCAGCAAGGCTTTTGCCATCGCGACGCGCTCACTCATTGGCCTTTGCAGTTCATCGAACGTCGTCGCGCTAAAG                                                               >  SRR4302543.7343783/1‑94 (MQ=60)
                                 CGTCGTATCCCGCCTGTTTCAGCAAGGCTTTTGCCATCGCGACGCGCTCACTCATTGGCCTTTGCAGTTCATCGACCGTCGTCGCGCTAAATCC                                                             >  SRR4302543.541727/1‑94 (MQ=60)
                                  GTCGTATCCCGCCTGTTTCAGCAAGGCTTTTGCCATCGCGACGCGCTCACTCATTGGCCTTTGCAGTTCATCGAACGTCGTCGCGCTAAAGCCT                                                            <  SRR4302543.7835590/94‑1 (MQ=60)
                                  GTCGTATCCCGCCTGTTTCAGCAAGGCTTTTGCCATCGCGACGCGCTCACTCATTGGCCTTTGCAGTTCATCGAACGTCGTCGCGCTAAAGCCT                                                            <  SRR4302543.7835591/94‑1 (MQ=60)
                                   TCGTATCCCGCCTGTTTCAGCAAGGCTTTTGCCATCGCGACGCGCTCACTCATTGGCCTTTGCAGTTCATCGAACGTCGTCGCGCTAAAGCCTT                                                           <  SRR4302543.5065785/94‑1 (MQ=60)
                                   TCGTATCCCGCCTGTTTCAGCAAGGCTTTTGCCATCGCGACGCGCTCACTCATTGGCCTTTGCAGTTCATCGAACGTCGTCGCGCTAAAGCCTT                                                           <  SRR4302543.1467025/94‑1 (MQ=60)
                                    CGTATCCCGCCTGTTTCAGCAAGGCTTTTGCCATCGCGACGCGCTCACTCATTGGCCTTTGCAGTTCATCGAACGTCGTCGCGCTAAAGCCTTT                                                          <  SRR4302543.3614975/94‑1 (MQ=60)
                                    CGTATCCCGCCTGTTTCAGCAAGGCTTTTGCCATCGCGACGCGCTCACTCATTGGCCTTTGCAGTTCATCGAACGTCGTCGCGCTAAAGCCTTT                                                          >  SRR4302543.2682469/1‑94 (MQ=60)
                                    CGTACCCCGCCTGTTTCAGCAAGGCTTTTGCCATCGCGACGCGCTCACTCATTGGCCTTTGCAGTTCATCGAACGTCGTCGCGCTAAAGCCTTT                                                          <  SRR4302543.5018941/94‑1 (MQ=60)
                                     GTATCCCGCCTGTTTCAGCAAGGCTTTTGCCATCGCGACGCGCTCACTCATTGGCCTTTGCAGTTCATCGAACGTCGTCGCGCTAAAGCCTTTT                                                         >  SRR4302543.5361873/1‑94 (MQ=60)
                                      TATCCCGCCTGTTTCAGCAAGGCTTTTGCCATCGCGACGCGCTCACTCATTGGCCTTTGCAGTTCATCGAACGTCGTCGCGCTAAAGCCTTTTA                                                        <  SRR4302543.991961/94‑1 (MQ=60)
                                      TATCCCGCCTGTTTCAGCAAGGCTTTTGCCATCGCGACGCGCTCACTCATTGGCCTTTGCAGTTCATCGAACGTCGTCGCGCTAAAGCCTTTTA                                                        >  SRR4302543.7306981/1‑94 (MQ=60)
                                      TATCCCGCCTGTTTCAGCAAGGCTTTTGCCATCGCGACGCGCTCACTCATTGGCCTTTGCAGTTCATCGAACGTCGTCGCGCTAAAGCCTTTTA                                                        >  SRR4302543.6297985/1‑94 (MQ=60)
                                      TATCCCGCCTGTTTCAGCAAGGCTTTTGCCATCGCGACGCGCTCACTCATTGGCCTTTGCAGTTCATCGAACGTCGTCGCGCTAAAGCCTTTTA                                                        >  SRR4302543.3747751/1‑94 (MQ=60)
                                      TATCCCGCCTGTTTCAGCAAGGCTTTTGCCATCGCGACGCGCTCACTCATTGGCCTTTGCAGTTCATCGAACGTCGTCGCGCTAAAGCCTTTTA                                                        >  SRR4302543.2331618/1‑94 (MQ=60)
                                       ATCCCGCCTGTTTCAGCAAGGCTTTTGCCATCGCGACGCGCTCACTCATTGGCCTTTTCAGTTCATCGAACGTCGTCGCGCTAAAGCCTTTTAC                                                       >  SRR4302543.1750744/1‑94 (MQ=60)
                                       ATCCCGCCTGTTTCAGCAAGGCTTTTGCCATCGCGACGCGCTCACTCATTGGCCTTTGCAGTTCATCGAACGTCGTCGCGCTAAAGCCTTTTAC                                                       <  SRR4302543.3859876/94‑1 (MQ=60)
                                       ATCCCGCCTGTTTCAGCAAGGCTTTTGCCATCGCGACGCGCTCACTCATTGGCCTTTGCAGTTCATCGAACGTCGTCGCGCTAAAGCCTTTTAC                                                       >  SRR4302543.2166763/1‑94 (MQ=60)
                                       ATCCCGCCTGTTTCAGCAAGGCTTTTGCCATCGCGACGCGCTCACTCATTGGCCTTTGCAGTTCATCGAACGTCGTCGCGCTAAAGCCTTTTAC                                                       >  SRR4302543.4584912/1‑94 (MQ=60)
                                       ATCCCGCCTGTTTCAGCAAGGCTTTTGCCATCGCGACGCGCTCACTCATTGGCCTTTGCAGTTCATCGAACGTCGTCGCGCTAAAGCCTTTTAC                                                       >  SRR4302543.1750505/1‑94 (MQ=60)
                                        TCCCGCCTGTTTCAGCAAGGCTTTTGCCATCGCGACGCGCTCACTCATTGGCCTTTGCAGTTCATCGAACGTCGTCGCGCTAAAGCCTTTTACT                                                      >  SRR4302543.6550313/1‑94 (MQ=60)
                                        TCCCGCCTGTTTCAGCAAGGCTTTTGCCATCGCGACGCGCTCACTCATTGGCCTTTGCAGTTCATCGAACGTCGTCGCGCTAAAGCCTTTTACC                                                      >  SRR4302543.632134/1‑94 (MQ=60)
                                         CCCGCCTGTTTCAGCAAGGCTTTTGCCATCGCGACGCGCTCACTCATTGGCCTTTGCAGTTCATCGAACGTCGTCGCGCTAAAGCCTTTTACCT                                                     >  SRR4302543.4187128/1‑94 (MQ=60)
                                         CCCGCCTGTTTCAGCAAGGCTTTTGCCATCGCGACGCGCTCACTCATTGGCCTTTGCAGTTCATCGAACGTCGTCGCGCTAAAGCCTTTTACCT                                                     <  SRR4302543.213583/94‑1 (MQ=60)
                                         CCCGCCTGTTTCAGCAAGGCTTTTGCCATCGCGACGCGCTCACTCATTGGCCTTTGCAGTACATCGAACGTCGTCGCGCTAAAGCCTTTTACCT                                                     >  SRR4302543.7696749/1‑94 (MQ=60)
                                          CCGCCTGTTTCAGCAAGGCTTTTGCCATCGCGACGCGCTCACTCATTGGCCTTTACAGTTCATCGAACGTAGTCGCGCTCAAGCCTTTTACCTT                                                    >  SRR4302543.963817/1‑94 (MQ=60)
                                           CGCCTGTTTCAGCAAGGCTTTTGCCATCGCGACGCGCTCACTCATTGGCCTTTGCAGTTCATCGAACGTCGTCGCGCTAAAGCCTTTTACCTCT                                                   >  SRR4302543.2954402/1‑94 (MQ=60)
                                           CGCCTGTTTCAGCAAGGCTTTTGCCATCGCGACGCGCTCACTCATTGGCCTTTGCAGTTCATCGAACGTCGTCGCGCTAAAGCCTTTTACCTCT                                                   <  SRR4302543.6233219/94‑1 (MQ=60)
                                           CGCCTGTTTCAGCAAGGCTTTTGCCATCGCGACGCGCTCACTCATTGGCCTTTGCAGTTCATCGAACGTCGTCGCGCTAAAGCCTTTTACCTCT                                                   >  SRR4302543.7420700/1‑94 (MQ=60)
                                           CGCCTGTTTCAGCAAGGCTTTTGCCATCGCGACGCGCTCACTCATTGGCCTTTGCAGTTCATCGAACGTCGTCGCGCTAAAGCCTTTTACCTCT                                                   <  SRR4302543.4392984/94‑1 (MQ=60)
                                           CGCCTGTTTCAGCAAGGCTTTTGCCATCGCGACGCGCTCACTCATTGGCCTTTGCAGTTCATCGAACGTCGTCGCGCTAAAGCCTTTTACCTCT                                                   <  SRR4302543.4392985/94‑1 (MQ=60)
                                            GCCTGTTTCAGCAAGGCTTTTGCCATCGCGACGCGCTCACTCATTGTCCTTTGCAGTTCATCGAACGTCGTCGCGCTAAAGCCTTTTACCTCTG                                                  <  SRR4302543.5449680/94‑1 (MQ=60)
                                            GCCTGTTTCAGCAAGGCTTTTGCCATCGCGACGCGCTCACTCATTGGCCTTTGCAGTTCATCGAACGTCGTCGCGCTAAAGCCTTTTACCTCTG                                                  <  SRR4302543.97852/94‑1 (MQ=60)
                                            GCCTGTTTCAGCAAGGCTTTTGCCATCGCGACGCGCTCACTCATTGGCCTTTGCAGTTCATCGAACGTCGTCGCGCTAAAGCCTTTTACCTCTG                                                  <  SRR4302543.4113942/94‑1 (MQ=60)
                                            GCCTGTTTCAGCAAGGCTTTTGCCATCGCGACGCGCTCACTCATTGGCCTTTGCAGTTCATCGAACGTCGTCGCGCTAAAGCCTTTTACCTCTG                                                  <  SRR4302543.2682692/94‑1 (MQ=60)
                                            GCCTGTTTCAGCAAGGCTTTTGCCATCGCGACGCGCTCACTCATTGGCCTTTGCAGTTCATCGAACGTCGTCGCGCTAAAGCCTTTTACCTCTG                                                  <  SRR4302543.7441760/94‑1 (MQ=60)
                                            GCCTGTTTCAGCAAGGCTTTTGCCATCGCGACGCGCTCACTCATTGGCCTTTGCAGTTCATCGAACGTCGTCGCGCTAAAGCCTTTTACCTCTG                                                  <  SRR4302543.6395630/94‑1 (MQ=60)
                                            GCCTGTTTCAGCAAGGCTTTTGCCATCGCGACGCGCTCACTCATTGGCCTTTGCAGTTCATCGAACGTCGTCGCGCTAAAGCCTTTTACCTCTG                                                  <  SRR4302543.5449681/94‑1 (MQ=60)
                                             CCTGTTTCAGCAAGGCTTTTGCCATCGCGACGCGCTCACTCATTGGCCTTTGCAGTTCATCGAACGTCGTCGCGCTAAAGCCTTTTACCTCTGG                                                 >  SRR4302543.4374292/1‑94 (MQ=60)
                                             CCTGTTTCAGCAAGGCTTTTGCCATCGCGACGCGCTCACTCATTGGCCTTTGCAGTTCATCGAACGTCGTCGCGCTAAAGCCTTTTACCTCTGG                                                 <  SRR4302543.6709851/94‑1 (MQ=60)
                                             CCTGTTTCAGCAAGGCTTTTGCCATCGCGACGCGCTCACTCATTGGCCTTTGCAGTTCATCGAACGTCGTCGCGCTAAAGCCTTTTACCTCTGG                                                 <  SRR4302543.5902067/94‑1 (MQ=60)
                                             CCTGTTTCAGCAAGGCTTTTGCCATCGCGACGCGCTCACTCATTGGCCTTTGCAGTTCATCGAACGTCGTCGCGCTAAAGCCTTTTACCTCTGG                                                 <  SRR4302543.3690603/94‑1 (MQ=60)
                                              CTGTTTCAGCAAGGCTTTTGCCATCGCGACGCGCTCACTCATTGGCCTTTGCAGTTCATCGAACGTCGTCGCGCTAAAGCCTTTTACCTCTGGC                                                >  SRR4302543.7090167/1‑94 (MQ=60)
                                              CTGTTTCAGCAAGGCTTTTGCCATCGCGACGCGCTCACTCATTGGCCTTTGCAGTTCATCGAACGTCGTCGCGCTAAAGCCTTTTACCTCTGGC                                                <  SRR4302543.6248148/94‑1 (MQ=60)
                                              CTGTTTCAGCAAGGCTTTTGCCATCGCGACGCGCTCACTCATTGGCCTTTGCAGTTCATCGAACGTCGTCGCGCTAAAGCCTTTTACCTCTGGC                                                >  SRR4302543.6352200/1‑94 (MQ=60)
                                              CTGTTTCAGCAAGGCTTTTGCCATCGCGACGCGCTCACTCATTGGCCTTTGCAGTTCATCGAACGTCGTCGCGCTAAAGCCTTTTACCTCTGGC                                                >  SRR4302543.6345224/1‑94 (MQ=60)
                                              CTGTTTCAGCAAGGCTTTTGCCATCGCGACGCGCTCACTCATTGGCCTTTGCAGTTCATCGAACGTCGTCGCGCTAAAGCCTTTTACCTCTGGC                                                >  SRR4302543.6215134/1‑94 (MQ=60)
                                                GTTTCAGCAAGGCTTTTGCCATCGCGACGCGCTCACTCATTGGCCTTTGCAGTTCATCGAACGTCGTCGCGCTAAAGCCTTTTACCTCTGGCGG                                              >  SRR4302543.2434329/1‑94 (MQ=60)
                                                GTTTCAGCAAGGCTTTTGCCATCGCGACGCGCTCACTCATTGGCCTTTGCAGTTCATCGAACGTCGTCGCGCTAAAGCCTTTTACCTCTGGCGG                                              >  SRR4302543.2976072/1‑94 (MQ=60)
                                                    CAGCAAGGCTTTTGCCATCGCGACGCGCTCACTCATTGGCCTTTGCAGTTCATCGAACGTCGTCGCGCTAAAGCCTTTTACCTCTGGCGGCGTC                                          >  SRR4302543.4261464/1‑94 (MQ=60)
                                                    CAGCAAGGCTTTTGCCATCGCGACGCGCTCACTCATTGGCCTTTGCAGTTCATCGAACGTCGTCGCGCTAAAGCCTTTTACCTCTGGCGGCGTC                                          >  SRR4302543.6460180/1‑94 (MQ=60)
                                                     AGCAAGGCTTTTGCCATCGCGACGCGCTCACTCATTGGCCTTTGCAGTTCATCGAACGTCGTCGCGCTAAAGCCTTTTACCTCTGGCGGCGTCA                                         >  SRR4302543.3950685/1‑94 (MQ=60)
                                                     AGCAAGGCTTTTGCCATCGCGACGCGCTCACTCATTGGCCTTTGCAGTTCATCGAACGTCGTCGCGCTAAAGCCTTTTACCTCTGGCGGCGTCA                                         >  SRR4302543.353287/1‑94 (MQ=60)
                                                      GCAAGGCTTTTGCCATCGCGACGCGCTCACTCATTGGCCTTTGCAGTTCATCGAACGTCGTCGCGCTAAAGCCTTTTACCTCTGGCGGCGTCAG                                        <  SRR4302543.2432646/94‑1 (MQ=60)
                                                      GCAAGGCTTTTGCCATCGCGACGCGCTCACTCATTGGCCTTTGCAGTTCATCGAACGTCGTCGCGCTAAAGCCTTTTACCTCTGGCGGCGTCAG                                        <  SRR4302543.6067694/94‑1 (MQ=60)
                                                      GCAAGGCTTTTGCCATCGCGACGCGCTCACTCATTGGCCTTTGCAGTTCATCGAACGTCGTCGCGCTAAAGCCTTTTACCTCTGGCGGCGTCAG                                        >  SRR4302543.4815652/1‑94 (MQ=60)
                                                       CAAGGCTTTTGCCATCGCGACGCGCTCACTCATTGGCCTTTGCAGTTCATCGAACGTCGTCGCGCTAAAGCCTTTTACCTCTGGCGGCGTCAGC                                       >  SRR4302543.2567069/1‑94 (MQ=60)
                                                       CAAGGCTTTTGCCATCGCGACGCGCTCACTCATTGGCCTTTGCAGTTCATCGAACGTCGTCGCGCTAAAGCCTTTTACCTCTGGCGGCGTCAGC                                       <  SRR4302543.6056315/94‑1 (MQ=60)
                                                       CAAGGCTTTTGCCATCGCGACGCGCTCACTCATTGGCCTTTGCAGTTCATCGAACGTCGTCGCGCTAAAGCCTTTTACCTCTGGCGGCGTCAGC                                       >  SRR4302543.2348767/1‑94 (MQ=60)
                                                       CAAGGCTTTTGCCATCGCGACGCGCTCACTCATTGGCCTTTGCAGTTCATCGAACGTCGTCGCGCTAAAGCCTTTTACCTCTGGCGGCGTCAGC                                       >  SRR4302543.2177814/1‑94 (MQ=60)
                                                       CAAGGCTTTTGCCATCGCGACGCGCTCACTCATTGGCCTTTGCAGTTCATCGAACGGCGTCGCGCTAAAGCCTTTTACCTCTGGCGGCGTCAGC                                       >  SRR4302543.7868352/1‑94 (MQ=60)
                                                        AAGGCTTTTGCCATCGCGACGCGCTCACTCATTGGCCTTTGCAGTTCATCGAACGTCGTCGCGCTAAAGCCTTTTACCTCTGGCGGCGTCAGCG                                      <  SRR4302543.1052878/94‑1 (MQ=60)
                                                        AAGGCTTTTGCCATCGCGACGCGCTCACTCATTGGCCTTTGCAGTTCATCGAACGTCGTCGCGCTAAAGCCTTTTACCTCTGGCGGCGTCAGCG                                      >  SRR4302543.604958/1‑94 (MQ=60)
                                                         AGGCTTTTGCCATCGCGACGCGCTCACTCATTGGCCTTTGCAGTTCATCGAACGTCGTCGCGCTAAAGCCTTTTACCTCTGGCGGCGTCAGCGT                                     >  SRR4302543.3031783/1‑94 (MQ=60)
                                                          GGCTTTTGCCATCGCGACGCGCTCACTCATTGGCCTTTGCAGTTCATCGAACGTCGTCGCGCTAAAGCCTTTTACCTCTGGCGGCGTCAGCGTG                                    >  SRR4302543.293062/1‑94 (MQ=60)
                                                          GGCTTTTGCCATCGCGACGCGCTCACTCATTGGCCTTTGCAGTTCATCGAACGTCGTCGCGCTAAAGCCTTTTACCTCTGGCGGCGTCAGCGTG                                    <  SRR4302543.6434978/94‑1 (MQ=60)
                                                           GCTTTTGCCATCGCGACGCGCTCACTCATTGGCCTTTGCAGTTCATCGAACGTCGTCGCGCTAAAGCCTTTTACCTCTGGCGGCGTCAGCGTGG                                   >  SRR4302543.543491/1‑94 (MQ=60)
                                                             TTTTGCCATCGCGACGCGCTCACTCATTGGCCTTTGCAGTTCATCGAACGTCGTCGCGCTAAAGCCTTTTACCTCTGGCGGCGTCAGCGTGGTT                                 <  SRR4302543.285823/94‑1 (MQ=60)
                                                             TTTTGCCATCGCGACGCGCTCACTCATTGGCCTTTGCAGTTCATCGAACGTCGTCGCGCTAAAGCCTTTTACCTCTGGCGGCGTCAGCGTGGTT                                 <  SRR4302543.4708244/94‑1 (MQ=60)
                                                             TTATGCGATCGCGACTCGCGCTCTCATTTGCCTTTGCAGGTCATCGAACTTCGTGGCCCTAAAGCGTTTTACCTCTGGCGGCGTCAGCGTGGTT                                 <  SRR4302543.4708245/94‑1 (MQ=28)
                                                              TTTGCCATCGCGACGCGCTCACTCATTGGCCTTTGCAGTTCATCGAACGTCGTCGCGCTAAAGCCTTTTACCTCTGGCGGCGTCAGCGTGGTTG                                <  SRR4302543.7297715/94‑1 (MQ=60)
                                                               TTGCCATCGCGACGCGCTCACTCATTGGCCTTTGCAGTTCATCGAACGTCGTCGCGCTAAAGCCTTTTACCTCTGGCGGCGTCAGCGTGGTTGC                               <  SRR4302543.7796055/94‑1 (MQ=60)
                                                               TTGCCATCGCGACGCGCTCACTCATTGGCCTTTGCAGTTCATCGAACGTCGTCGCGCTAAAGCCTTTTACCTCTGGCGGCGTCAGCGTGGTTGC                               <  SRR4302543.2409946/94‑1 (MQ=60)
                                                                TGCCATCGCGACGCGCTCACTCATTGGCCTTTGCAGTTCATCGAACGTCGTCGCGCTAAAGCCTTTTACCTCTGGCGGCGTCAGCGTGGTTGCG                              <  SRR4302543.5313734/94‑1 (MQ=60)
                                                                 GCCATCGCGACGCGCTCACTCATTGGCCTTTGCAGTTCATCGAACGTCGTCGAGCTAAAGCCTTTTACCTCTGGCGGCGTCAGCGTGGTTGCGG                             >  SRR4302543.3261220/1‑94 (MQ=60)
                                                                  CCATCGCGACGCGCTCACTCATTGGCCTTTGCAGTTCATCGAACGTCGTCGCGCTAAAGCCTTTTACCTCTGGCGGCGTCAGCGTGGTTGCGGG                            >  SRR4302543.2144662/1‑94 (MQ=60)
                                                                    ATCGCGACGCGCTCACTCATTGGCCTTTGCAGTTCATCGAACGTCGTCGCGCTAAAGCCTTTTACCTCTGGCGGCGTCAGCGTGGTTGCGGGCG                          >  SRR4302543.2071089/1‑94 (MQ=60)
                                                                    ATCGCGACGCGCTCACTCATTGGCCTTTGCAGTTCATCGAACGTCGTCGCGCTAAAGCCTTTTACCTCTGGCGGCGTCAGCGTGGTTGCGGGCG                          <  SRR4302543.4321157/94‑1 (MQ=60)
                                                                    ATCGCGACGCGCTCACTCATTGGCCTTTGCAGTTCATCGAACGTCGTCGCGCTAAAGCCTTTTACCTCTGGCGGCGTCAGCGTGGTTGCGGGCG                          >  SRR4302543.7172089/1‑94 (MQ=60)
                                                                      CGCGACGCGCTCACTCATTGGCCTTTGCAGTTCATCGAACGTCGTCGCGCTAAAGCCTTTTACCTCTGGCGGCGTCAGCGTGGTTGCGGGCGTT                        <  SRR4302543.4320257/94‑1 (MQ=60)
                                                                        CGACGCGCTCACTCATTGGCCTTTGCAGTTCATCGAACGTCGTCGCGCTAAAGCCTTTTACCTCTGGCGGCGTCAGCGTGGTTGCGGGCGTTCT                      >  SRR4302543.3923199/1‑94 (MQ=60)
                                                                        CGACGCGCTCACTCATTGGCCTTTGCAGTTCATCGAACGTCGTCGCGCTAAAGCCTTTTACCTCTGGCGGCGTCAGCGTGGTTGCGGGCGTTCT                      >  SRR4302543.6849315/1‑94 (MQ=60)
                                                                        CGACGCGCTCACTCATTGGCCTTTGCAGTTCATCGAACGTCGTCGCGCTAAAGCCTTTTACCTCTGGCGGCGTCAGCGTGGTTGCGGGCGTTCT                      >  SRR4302543.4362072/1‑94 (MQ=60)
                                                                         GACGCGCTCACTCATTGGCCTTTGCAGTTCATCGAACGTCGTCGCGCTAAAGCCTTTTACCTCTGGCGGCGTCAGCGTGGTTGCGGGCGTTCTC                     <  SRR4302543.2196871/94‑1 (MQ=60)
                                                                         GACGCGCTCACTCATTGGCCTTTGCAGTTCATCGAACGTCGTCGCGCTAAAGCCTTTTACCTCTGGCGGCGTCAGCGTGGTTGCGGGCGTTCTC                     >  SRR4302543.2796674/1‑94 (MQ=60)
                                                                         GACGCGCTCACTCATTGGCCTTTGCAGTTCATCGAACGTCGTCGCGCTAAAGCCTTTTACCTCTGGCGGCGTCAGCGTGGTTGCGGGCGTTCTC                     >  SRR4302543.5291659/1‑94 (MQ=60)
                                                                          ACGCGCTCACTCATTGGCCTTTGCAGTTCATCGAACGTCGTCGCGCTAAAGCCTTTTACCTCTGGCGGCGTCAGCGTGGTTGCGGGCGTTCTCA                    <  SRR4302543.199892/94‑1 (MQ=60)
                                                                          ACGCGCTCACTCATTGGCCTTTGCAGTTCATCGAACGTCGTCGCGCTAAAGCCTTTTACCTCTGGCGGCGTCAGCGTGGTTGCGGGCGTTCTCA                    <  SRR4302543.869997/94‑1 (MQ=60)
                                                                           CGCGCTCACTCATTGGCCTTTGCAGTTCATCGAACGTCGTCGCGCTAAAGCCTTTTACCTCTGGCGGCGTCAGCGTGGTTGCGGGCGTTCTCAA                   <  SRR4302543.7544174/94‑1 (MQ=60)
                                                                            GCGCTCACTCATTGGCCTTTGCAGTTCATCGAACGTCGTCGCGCTAAAGCCTTTTACCTCTGGCGGCGTCAGCGTGGTTGCGGGCGTTCTCAAC                  <  SRR4302543.1530911/94‑1 (MQ=60)
                                                                             CGCTCACTCATTGGCCTTTGCAGTTCATCGAACGTCGTCGCGCTAAAGCCTTTTACCTCTGGCGGCGTCAGCGTGGTTGCGGGCGTTCTCAACC                 <  SRR4302543.4457792/94‑1 (MQ=60)
                                                                              GCTCACTCATTGGCCTTTGCAGTTCATCGAACGTCGTCGCGCTAAAGCCTTTTACCTCTGGCGGCGTCAGCGTGGTTGCGGGCGTTCTCAACCC                <  SRR4302543.3302929/94‑1 (MQ=60)
                                                                              GCTCACTCATTGGCCTTTGCAGTTCAGCGAACGTCGTCGCGCTAAAGCCTTTTCCCTCTGGCGGCGTCAGCGTGGTTGCGGGCGTTCTCAACCC                <  SRR4302543.3302928/94‑1 (MQ=60)
                                                                               CTCAGTCATTGGCCTTTGCAGTTCATCGAACGTCGTTGCGCTTAAGCCTTTTACCTCTGGCGGCGTCAGCGTGGTTGCGGGCGTTCTCAACCCC               <  SRR4302543.5309632/94‑1 (MQ=60)
                                                                               CTCACTCATTGGCCTTTGCAGTTCATCGAACGTCGTCGCGCTAAAGCCTTTTACCTCTGGCGGCGTCAGCGTGGTTGCGGGCGTTCTCAACCCC               >  SRR4302543.2992779/1‑94 (MQ=60)
                                                                                TCACTCATTGGCCTTTGCAGTTCATCGAACGTCGTCGCGCTAAAGCCTTTTACCTCTGGCGGCGTCAGCGTGGTTGCGGGCGTTCTCAACCCCA              >  SRR4302543.6063168/1‑94 (MQ=60)
                                                                                    TCATTGGCCTTTGCAGTTCATCGAACGTCGTCGCGCTAAAGCCTTTTACCTCTGGCGGCGTCAGCGTGGTTGCGGGCGTTCTCAACCCCAGTAC          <  SRR4302543.7092367/94‑1 (MQ=60)
                                                                                     CATTGGCCTTTGCAGTTCATCGAACGTCGTCGCGCTAAAGCCTTTTACCTCTGGCGGCGTCAGCGTGGTTGCGGGCGTTCTCAACCCCAGTACC         >  SRR4302543.3315801/1‑94 (MQ=60)
                                                                                      ATTGGCCTTTGCAGTTCATCGAACGTCGTCGCGCTAAAGCCTTTTACCTCTGGCGGCGTCAGCGTGGTTGCGGGCGTTCTCAACCCCAGTACCT        <  SRR4302543.3386427/94‑1 (MQ=60)
                                                                                      ATTGGCCTTTGCAGTTCATCGAACGTCGTCGCGCTAAAGCCTTTTACCTCTGGCGGCGTCAGCGTGGTTGCGGGCGTTCTCAACCCCAGTACCT        >  SRR4302543.4979765/1‑94 (MQ=60)
                                                                                      ATTGGCCTTTGCAGTTCATCGAACGTCGTCGCGCTAAAGCCTTTTACCTCTGGCGGCGTCAGCGTGGTTGCGGGCGTTCTCAACCCCAGTACCT        >  SRR4302543.5941567/1‑94 (MQ=60)
                                                                                         GGCCTTTGCGGTTCATCGAACGTCGTCGCGCTAAAGCCTTTTACCTCTGGCGGCGTCAGCGTGGTTGCGGGCGTTCTCAACCCCAGTACCTTTT     >  SRR4302543.1633453/1‑94 (MQ=60)
                                                                                         GGCCTTTGCAGTTCATCGAACGTCGTCGCGCTAACGCCTTTTACCTCTGGCGGCGTCAGCGTGGTTGCGGGCGTTCTCAACCCCAGTACCTTTT     >  SRR4302543.670118/1‑94 (MQ=60)
                                                                                          GCCTTTGCAGTTCATCGAACGTCGTCGCGCTAAAGCCTTTTACCTCTGGCGGCGTCAGCGTGGTTGCGGGCGTTCTCAACCCCAGTACCTTTTG    <  SRR4302543.6462166/94‑1 (MQ=60)
                                                                                           CCTTTGCAGTTCATCGAACGTCGTCGCGCTAAAGCCTTTTACCTCTGGCGGCGTCAGCGTGGTTGCGGGCGTTCTCAACCCCAGTACCTTTTGC   >  SRR4302543.3338395/1‑94 (MQ=60)
                                                                                           CCTTTGCAGTTCATCGAACATCGTCGCGCTAAAGCCTTTTACCTCTGGCGGCGTCAGCGTGGTTGCGGGCGTTCTCAACCCCAGTACCTTTTGC   >  SRR4302543.5755323/1‑94 (MQ=60)
                                                                                            CTTTGCAGTTCATCGAACGTCGTCGCGCTAAAGCCTTTTACCTCTGGCGGCGTCAGCGTGGTTGCGGGCGTTCTCAACCCCAGTACCTTTTGCG  <  SRR4302543.2524937/94‑1 (MQ=60)
                                                                                            CTTTGCAGTTCATCGAACGTCGTCGCGCTAAAGCCTTTTACCTCTGGCGGCGTCAGCGTGGTTGCGGGCGTTCTCAACCCCAGTACCTTTTGCG  <  SRR4302543.278254/94‑1 (MQ=60)
                                                                                            |                                                                                             
TGTAGAACAGCTCAAAGCGTAGCGGATGAGAGGCGTCGTATCCCGCCTGTTTCAGCAAGGCTTTTGCCATCGCGACGCGCTCACTCATTGGCTTTTGCAGTTCATCGAACGTCGTCGCGCTAAAGCCTTTTACCTCTGGCGGCGTCAGCGTGGTTGCGGGCGTTCTCAACCCCAGTACCTTTTGCG  >  NC_000913/3164585‑3164770

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 2 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑