Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.

ALE, Flask, Isolate	Predicted Mutations	Mean Coverage	Total Reads	Percent Mapped	Mapped Reads	Average Read Length
A1 F1 I1 R1	1696	279.3	15874187	97.8%	15524954	93.0

Breseq alignment

BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	3,186,266	T→C	V284A (GTC→GCC)	yqiG →	putative membrane protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	3,186,266	0	T	C	100.0%	1090.7 / NA	341	V284A (GTC→GCC)	yqiG	putative membrane protein
Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (170/171); total (170/171)

Only 100 of 354 total aligned reads displayed.

TGAAAAGCGATGAGAATATGTTACCGCCAGACCTACGTGGTTACGCACCGCAAATCACGGGTGTCGCACAAACGAATGCAAAGGTCACTGTCTCACAGAACAACCGTATTATTTATCAAGAAAATGTTCCTCCAGGCCCATTTGCTATTACCAATTTATTCAATACATTACAGGGGCAAC  >  NC_000913/3186176‑3186355

tGAAAAGCGATGAGAATATGTTACCGCCAGACCTACGTGGTTACGCACCGCAAATCACGGGTGTCGCACAAACGAATGCAAAGGTCACTGcct                                                                                         <  2:929060/93‑1 (MQ=255)

 gAAAAGCGATGAGAATATGTTACCGCCAGACCTACGTGGTTACGCACCGCAAATCACGGGTGTCGCACAAACGAATGCAAAGGTCACTGcctc                                                                                        >  1:128164/1‑93 (MQ=255)

 gAAAAGCGATGAGAATATGTTACCGCCAGACCTACGTGGTTACGCACCGCAAATCACGGGTGTCGCACAAACGAATGCAAAGGTCACTGcctc                                                                                        >  2:5171450/1‑93 (MQ=255)

  aaaaGCGATGAGAATATGTTACCGCCAGACCTACGTGGTTACGCACCGCAAATCACGGGTGTCGCACAAACGAATGCAAAGGTCACTGCCTca                                                                                       <  1:2186332/93‑1 (MQ=255)

    aaGCGATGAGAATATGTTACCGCCAGACCTACGTGGTTACGCACCGCAAATCACGGGTGTCGCACAAACGAATGCAAAGGTCACTGCCTcaca                                                                                     <  2:5503047/93‑1 (MQ=255)

     aGCGATGAGAATATGTTACCGCCAGACCTACGTGGTTACGCACCGCAAATCACGGGTGTCGCACAAACGAATGCAAAGGTCACTGCCTCACAg                                                                                    <  2:1859326/93‑1 (MQ=255)

     aGCGATGAGAATATGTTACCGCCAGACCTACGTGGTTACGCACCGCAAATCACGGGTGTCGCACAAACGAATGCAAAGGTCACTGCCTCACAg                                                                                    >  2:2482838/1‑93 (MQ=255)

      gCGATGAGAATATGTTACCGCCAGACCTACGTGGTTACGCACCGCAAATCACGGGTGTCGCACAAACGAATGCAAAGGTCACTGCCTCACAGa                                                                                   >  2:334535/1‑93 (MQ=255)

       cGATGAGAATATGTTACCGCCAGACCTACGTGGTTACGCACCGCAAATCACGGGTGTCGCACAAACGAATGCAAAGGTCACTGCCTCACAGaa                                                                                  <  1:5984859/93‑1 (MQ=255)

         aTGAGAATATGTTACCGCCAGACCTACGTGGTTACGCACCGCAAATCACGGGTGTCGCACAAACGAATGCAAAGGTCACTGCCTCACAGaaca                                                                                >  1:1385248/1‑93 (MQ=255)

          tGAGAATATGTTACCGCCAGACCTACGTGGTTACGCACCGCAAATCACGGGTGTCGCACAAACGAATGCAAAGGTCACTGCCTCACAGaacaa                                                                               <  1:1616912/93‑1 (MQ=255)

           gagaATATGTTACCGCCAGACCTACGTGGTTACGCACCGCAAATCACGGGTGTCGCACAAACGAATGCAAAGGTCACTGCCTCACAGaacaac                                                                              >  1:1819896/1‑93 (MQ=255)

           gagaATATGTTACCGCCAGACCTACGTGGTTACGCACCGCAAATCACGGGTGTCGCACAAACGAATGCAAAGGTCACTGCCTCACAGaacaac                                                                              <  2:3546818/93‑1 (MQ=255)

            agaATATGTTACCGCCAGACCTACGTGGTTACGCACCGCAAATCACGGGTGTCGCACAAACGAATGCAAAGGTCACTGCCTCACAGAACAAcc                                                                             <  2:1505939/93‑1 (MQ=255)

            agaATATGTTACCGCCAGACCTACGTGGTTACGCACCGCAAATCACGGGTGTCGCACAAACGAATGCAAAGGTCACTGCCTCACAGAACAAcc                                                                             >  1:5247448/1‑93 (MQ=255)

              aaTATGTTACCGCCAGACCTACGTGGTTACGCACCGCAAATCACGGGTGTCGCACAAACGAATGCAAAGGTCACTGCCTCACAGAACAACCGt                                                                           >  1:5946712/1‑93 (MQ=255)

               atatGTTACCGCCAGACCTACGTGGTTACGCACCGCAAATCACGGGTGTCGCACAAACGAATGCAAAGGTCACTGCCTCACAGAACAACCGta                                                                          >  2:6333736/1‑93 (MQ=255)

               atatGTTACCGCCAGACCTACGTGGTTACGCACCGCAAATCACGGGTGTCGCACAAACGAATGCAAAGGTCACTGCCTCACAGAACAACCGta                                                                          <  2:418125/93‑1 (MQ=255)

               atatGTTACCGCCAGACCTACGTGGTTACGCACCGCAAATCACGGGTGTCGCACAAACGAATGCAAAGGTCACTGCCTCACAGAACAACCGta                                                                          <  2:6154417/93‑1 (MQ=255)

               atatGTTACCGCCAGACCTACGTGGTTACGCACCGCAAATCACGGGTGTCGCACAAACGAATGCAAAGGTCACTGCCTCACAGAACAACCGta                                                                          <  1:5074424/93‑1 (MQ=255)

                tatGTTACCGCCAGACCTACGTGGTTACGCACCGCAAATCACGGGTGTCGCACAAACGAATGCAAAGGTCACTGCCTCACAGAACAACCGtat                                                                         >  2:2736068/1‑93 (MQ=255)

                 atGTTACCGCCAGACCTACGTGGTTACGCACCGCAAATCACGGGTGTCGCACAAACGAATGCAAAGGTCACTGCCTCACAGAACAACCGtatt                                                                        >  1:4681306/1‑93 (MQ=255)

                  tGTTACCGCCAGACCTACGTGGTTACGCACCGCAAATCACGGGTGTCGCACAAACGAATGCAAAGGTCACTGCCTCACAGAACAACCGtatta                                                                       >  1:2697633/1‑93 (MQ=255)

                   gTTACCGCCAGACCTACGTGGTTACGCACCGCAAATCACGGGTGTCGCACAAACGAATGCAAAGGTCACTGCCTCACAGAACAACCGtattat                                                                      >  1:3477473/1‑93 (MQ=255)

                   gTTACCGCCAGACCTACGTGGTTACGCACCGCAAATCACGGGTGTCGCACAAACGAATGCAAAGGTCACTGCCTCACAGAACAACCGtattat                                                                      >  1:7296155/1‑93 (MQ=255)

                   gTTACCGCCAGACCTACGTGGTTACGCACCGCAAATCACGGGTGTCGCACAAACGAATGCAAAGGTCACTGCCTCACAGAACAACCGtattat                                                                      <  2:5964631/93‑1 (MQ=255)

                    ttACCGCCAGACCTACGTGGTTACGCACCGCAAATCACGGGTGTCGCACAAACGAATGCAAAGGTCACTGCCTCACAGAACAACCGTattatt                                                                     >  1:3165352/1‑93 (MQ=255)

                     tACCGCCAGACCTACGTGGTTACGCACCGCAAATCACGGGTGTCGCACAAACGAATGCAAAGGTCACTGCCTCACAGAACAACCGTAttattt                                                                    <  1:3934877/93‑1 (MQ=255)

                         gCCAGACCTACGTGGTTACGCACCGCAAATCACGGGTGTCGCACAAACGAATGCAAAGGTCACTGCCTCACAGAACAACCGTATTATTTATCa                                                                >  1:4012127/1‑93 (MQ=255)

                         gCCAGACCTACGTGGTTACGCACCGCAAATCACGGGTGTCGCACAAACGAATGCAAAGGTCACTGCCTCACAGAACAACCGTATTATTTATCa                                                                >  2:5589344/1‑93 (MQ=255)

                          ccAGACCTACGTGGTTACGCACCGCAAATCACGGGTGTCGCACAAACGAATGCAAAGGTCACTGCCTCACAGAACAACCGTATTATTTATCaa                                                               <  2:7389133/93‑1 (MQ=255)

                           cAGACCTACGTGGTTACGCACCGCAAATCCCGGGTGTCGCACAAACGAATGCAAAGGTCACTGCCTCACAGAACAACCGTATTATTTATCAAg                                                              <  2:7676601/93‑1 (MQ=255)

                           cAGACCTACGTGGTTACGCACCGCAAATCACGGGTGTCGCACAAACGAATGCAAAGGTCACTGCCTCACAGAACAACCGTATTATTTATCAAg                                                              >  1:5003283/1‑93 (MQ=255)

                            aGACCTACGTGGTTACGCACCGCAAATCACGGGTGTCGCACAAACGAATGCAAAGGTCACTGCCTCACAGAACAACCGTATTATTTATCAAGa                                                             <  2:4417360/93‑1 (MQ=255)

                             gACCTACGTGGTTACGCACCGCAAATCACGGGTGTCGCACAAACGAATGCAAAGGTCACTGCCTCACAGAACAACCGTATTATTTATCAAGaa                                                            >  2:2139849/1‑93 (MQ=255)

                              aCCTACGTGGTTACGCACCGCAAATCACGGGTGTCGCACAAACGAATGCAAAGGTCACTGCCTCACAGAACAACCGTATTATTTATCAAGaaa                                                           <  1:3683817/93‑1 (MQ=255)

                               ccTACGTGGTTACGCACCGCAAATCACGGGTGTCGCACAAACGAATGCAAAGGTCACTGCCTCACAGAACAACCGTATTATTTATCAAGaaaa                                                          <  1:797318/93‑1 (MQ=255)

                                  aCGTGGTTACGCACCGCAAATCACGGGTGTCGCACAAACGAATGCAAAGGTCACTGCCTCACAGAACAACCGTATTATTTATCAAGAAAATGt                                                       >  2:3096183/1‑93 (MQ=255)

                                   cGTGGTTACGCACCGCAAATCACGGGTGTCGCACAAACGAATGCAAAGGTCACTGCCTCACAGAACAACCGTATTATTTATCAAGAAAATGtt                                                      <  2:7575652/93‑1 (MQ=255)

                                   cGTGGTTACGCACCGCAAATCACGGGTGTCGCACAAACGAATGCAAAGGTCACTGCCTCACAGAACAACCGTATTATTTATCAAGAAAATGtt                                                      <  1:3220213/93‑1 (MQ=255)

                                   cGTGGTTACGCACCGCAAATCACGGGTGTCGCACAAACGAATGCAAAGGTCACTGCCTCACAGAACAACCGTATTATTTATCAAGAAAATGtt                                                      >  1:548610/1‑93 (MQ=255)

                                    gtagTTACGCACCGCAAATCACGGGAGTCTCACAAACGCATGCAAAGGTCACCGCCTCACAGAACTACCGTATTATTTATCTATAAAATCTtc                                                     >  2:3975800/4‑93 (MQ=255)

                                    gTGGTTACGCACCGCAAATCACGGGTGTCGCACAAACGAATGCAAAGGTCACTGCCTCACAGAACAACCGTATTATTTATCAAGAAAATGTtc                                                     >  2:3890365/1‑93 (MQ=255)

                                    gTGGTTACGCACCGCAAATCACGGGTGTCGCACAAACGAATGCAAAGGTCACTGCCTCACAGAACAACCGTATTATTTATCAAGAAAATGTtc                                                     <  1:483986/93‑1 (MQ=255)

                                     tGGTTACGCACCGCAAATCACGGGTGTCGCACAAACGAATGCAAAGGTCACTGCCTCACAGAACAACCGTATTATTTATCAAGAAAATGTtcc                                                    >  1:2325070/1‑93 (MQ=255)

                                      ggTTACGCACCGCAAATCACGGGTGTCGCACAAACGAATGCAAAGGTCACTGCCTCACAGAACAACCGTATTATTTATCAAGAAAATGTtcct                                                   <  2:4996144/93‑1 (MQ=255)

                                       gTTACGCACCGCAAATCACGGGTGTCGCACAAACGAATGCAAAGGTCACTGCCTCACAGAACAACCGTATTATTTATCAAGAAAATGTtcctc                                                  >  1:6230543/1‑93 (MQ=255)

                                       gTTACGCACCGCAAATCACGGGTGTCGCACAAACGAATGCAAAGGTCACTGCCTCACAGAACAACCGTATTATTTATCAAGAAAATGTtcctc                                                  >  1:1889080/1‑93 (MQ=255)

                                       gTTACGCACCGCAAAGCACGGGTGTCGCACAAACGAATGCAAAGGTCACTGCCTCACAGAACAACCGTATTATTTATCAAGAAAATGTtcctc                                                  >  2:7823227/1‑93 (MQ=255)

                                        ttACGCACCGCAAATCACGGGTGTCGCACAAACGAATGCAAAGGTCACTGCCTCACAGAACAACCGTATTATTTATCAAGAAAATGTtcctcc                                                 <  1:6109811/93‑1 (MQ=255)

                                        ttACGCACCGCAAATCACGGGTGTCGCACAAACGAATGCAAAGGTCACTGCCTCACAGAACAACCGTATTATTTATCAAGAAAATGTtcctcc                                                 >  2:6504711/1‑93 (MQ=255)

                                        ttACGCACCGCAAATCACGGGTGTCGCACAAACGAATGCAAAGGTCACTGCCTCACAGAACAACCGTATTATTTATCAAGAAAATGTtcctcc                                                 >  1:7364727/1‑93 (MQ=255)

                                        ttACGCACCGCAAATCACGGGTGTCGCACAAACGAATGCAAAGGTCACTGCCTCACAGAACAACCGTATTATTTATCAAGAAAATGTtcctcc                                                 <  1:4579399/93‑1 (MQ=255)

                                        ttACGCACCGCAAATCACGGGTGGCGCACAAACGAATGCAAAGGGCACTGCCTCACAGAACAACCGTATTATTTATCAAGAAAATGTtcctcc                                                 >  2:5227283/1‑93 (MQ=255)

                                          aCGCACCGCAAATCACGGGTGTCGCACAAACGAATGCAAAGGTCACTGCCTCACAGAACAACCGTATTATTTATCAAGAAAATGTTCCTCCAg                                               <  2:7910831/93‑1 (MQ=255)

                                           cGCACCGCAAATCACGGGTGTCGCACAAACGAATGCAAAGGTCACTGCCTCACAGAACAACCGTATTATTTATCAAGAAAATGTTCCTCCAgg                                              <  1:1104038/93‑1 (MQ=255)

                                                 gCAAATCACGGGTGTCGCACAAACGAATGCAAAGGTCACTGCCTCACAGAACAACCGTATTATTTATCAAGAAAATGTTCCTCCAGGCCCAtt                                        >  1:7532506/1‑93 (MQ=255)

                                                 gCAAATCACGGGTGTCGCACAAACGAATGCAAAGGTCACTGCCTCACAGAACAACCGTATTATTTATCAAGAAAATGTTCCTCCAGGCCCAtt                                        >  2:4116199/1‑93 (MQ=255)

                                                  cAAATCACGGGTGTCGCACAAACGAATGCAAAGGGCACTGCCTCACAGAACAACCGTATTATTTATCAAGAAAATGTTCCTCCAGGCCCAttt                                       >  2:1090713/1‑93 (MQ=255)

                                                     aTCACGGGTGTCGCACAAACGAATGCAAAGGTCACTGCCTCACAGAACAACCGTATTATTTATCAAGAAAATGTTCCTCCAGGCCCATTTGCt                                    >  1:6985305/1‑93 (MQ=255)

                                                      tCACGGGTGTCGCACAAACGAATGCAAAGGTCACTGCCTCACAGAACAACCGTATTATTTATCAAGAAAATGTTCCTCCAGGCCCATTTGCTa                                   >  1:249776/1‑93 (MQ=255)

                                                      tCACGGGTGTCGCACAAACGAATGCAAAGGTCACTGCCTCACAGAACAACCGTATTATTTATCAAGAAAATGTTCCTCCAGGCCCATTTGCTa                                   <  1:7139730/93‑1 (MQ=255)

                                                       taCGGGTGTCGCACAAACGAATGCAAAGGTCACTGCCTCACAGAACAACCGTATTATTTATCAAGAAAATGTTCCTCCAGGCCCATTTGCTAt                                  <  2:896061/92‑1 (MQ=255)

                                                        aCGGGTGTCGCACAAACGAATGCAAAGGTCACTGCCTCACAGAACAACCGTATTATTTATCAAGAAAATGTTCCTCCAGGCCCATTTGCTAtt                                 <  1:6345742/93‑1 (MQ=255)

                                                         cGGGTGTCGCACAAACGAATGCAAAGGTCACTGCCTCACAGAACAACCGTATTATTTATCAAGAAAAAGTTCCTCCAGGCCCATTTGCTATTa                                >  2:1980131/1‑93 (MQ=255)

                                                           ggTGTCGCACAAACGAATGCAAAGGTCACTGCCTCACAGAACAACCGTATTATTTATCAAGAAAATGTTCCTCCAGGCCCATTTGCTATTAcc                              <  1:6881188/93‑1 (MQ=255)

                                                               tCGCACAAACGAATGCAAAGGTCACTGCCTCACAGAACAACCGTATTATTTATCAAGAAAATGTTCCTCCAGGCCCATTTGCTATTACCAAtt                          <  1:7577438/93‑1 (MQ=255)

                                                               tCGCACAAACGAATGCAAAGGTCACTGCCTCACAGAACAACCGTATTATTTATCAAGAAAATGTTCCTCCAGGCCCATTTGCTATTACCAAtt                          >  1:3030777/1‑93 (MQ=255)

                                                                 gCACAAACGAATGCAAAGGTCACTGCCTCACAGAACAACCGTATTATTTATCAAGAAAATGTTCCTCCAGGCCCATTTGCTATTACCAATTTa                        >  2:1354134/1‑93 (MQ=255)

                                                                  cacaAACGAATGCAAAGGTCACTGCCTCACAGAACAACCGTATTATTTATCAAGAAAATGTTCCTCCAGGCCCATTTGCTATTACCAATTTAt                       <  1:6658763/93‑1 (MQ=255)

                                                                  cacaAACGAATGCAAAGGTCACTGCCTCACAGAACAACCGTATTATTTATCAAGAAAATGTTCCTCCAGGCCCATTTGCTATTACCAATTTAt                       >  2:5138824/1‑93 (MQ=255)

                                                                   acaAACGAATGCAAAGGTCACTGCCTCACAGAACAACCGTATTATTTATCAAGAAAATGTTCCTCCAGGCCCATTTGCTATTACCAATTTAtt                      >  2:4566215/1‑93 (MQ=255)

                                                                    caAACTAATGCAAAGGTCACTGCCTCACAGAACAACCGTATTATTTATCAAGAAAATGTTCCTCCAGGCCCATTTGCTATTACCAATTTATTc                     <  1:2645242/93‑1 (MQ=255)

                                                                    caAACGAATGCAAAGGTCACTGCCTCACAGAACAACCGTATTATTTATCAAGAAAATGTTCCTCCAGGCCCATTTGCTATTACCAATTTATTc                     >  1:5789350/1‑93 (MQ=255)

                                                                    caAACGAATGCAAAGGTCACTGCCTCACAGAACAACCGTATTATTTATCAAGAAAATGTTCCTCCAGGCCCATTTGCTATTACCAATTTATTc                     >  1:2798090/1‑93 (MQ=255)

                                                                     aagcGAATGCAAAGGTCACTGCCTCACAGAACAACCGTATTATTTATCAAGAAAATGTTCCTCCAGGCCCATTTGCTATTACCAATTTATTCa                    <  2:5353512/90‑1 (MQ=255)

                                                                     aaaCGAATGCAAAGGTCACTGCCTCACAGAACAACCGTATTATTTATCAAGAAAATGTTCCTCCAGGCCCATTTGCTATTACCAATTTATTCa                    <  2:7214403/93‑1 (MQ=255)

                                                                      aaCGAATGCAAAGGTCACTGCCTCACAGAACAACCGTATTATTTATCAAGAAAATGTTCCTCCAGGCCCATTTGCTATTACCAATTTATTCaa                   <  1:7412292/93‑1 (MQ=255)

                                                                      aaCGAAGGCAAAGGTCTCTGCCTCCAAGAACAACCGTATTATTTATCAAGAAAATGTTCCTCCAGGCCCATTTGCTATTACCAATTTATTCaa                   <  1:4730995/93‑1 (MQ=255)

                                                                        cGAATGCAAAGGTCACTGCCTCACAGAACAACCGTATTATTTATCAAGAAAATGTTCCTCCAGGCCCATTTGCTATTACCAATTTATTCAATa                 <  1:5178010/93‑1 (MQ=255)

                                                                         gAATGCAAAGGTCACTGCCTCACAGAACAACCGTATTATTTATCAAGAAAATGTTCCTCCAGGCCCATTTGCTATTACCAATTTATTCAATAc                <  1:6810657/93‑1 (MQ=255)

                                                                         gAATGCAAAGGTCACTGCCTCACAGAACAACCGTATTATTTATCAAGAAAATGTTCCTCCAGGCCCATTTGCTATTACCAATTTATTCAATAc                >  1:995187/1‑93 (MQ=255)

                                                                          aaTGCAAAGGTCACTGCCTCACAGAACAACCGTATTATTTATCAAGAAAATGTTCCTCCAGGCCCATTTGCTATTACCAATTTATTCAATACa               >  2:6656169/1‑93 (MQ=255)

                                                                          aaTGCAAAGGTCACTGCCTCACAGAACAACCGTATTATTTATCAAGAAAATGTTCCTCCAGGCCCATTTGCTATTACCAATTTATTCAATACa               <  2:6988215/93‑1 (MQ=255)

                                                                          aaTGCAAAGGTCACTGCCTCACAGAACAACCGTATTATTTATCAAGAAAATGTTCCTCCAGGCCCATTTGCTATTACCAATTTATTCAATACa               <  2:2933522/93‑1 (MQ=255)

                                                                           aTGCAAAGGTCACTGCCTCACAGAACAACCGTATTATTTATCAAGAAAATGTTCCTCCAGGCCCATTTGCTATTACCAATTTATTCAATACAt              <  2:5781134/93‑1 (MQ=255)

                                                                            tGCAAAGGTCACTGCCTCACAGAACAACCGTATTATTTATCAAGAAAATGTTCCTCCAGGCCCATTTGCTATTACCAATTTATTCAATACAtt             <  2:462080/93‑1 (MQ=255)

                                                                            tGCAAAGGTCACTGCCTCACAGAACAACCGTATTATTTATCAAGAAAATGTTCCTCCAGGCCCATTTGCTATTACCAATTTATTCAATACAtt             <  1:4230918/93‑1 (MQ=255)

                                                                               aaaGGTCACTGCCTCACAGAACAACCGTATTATTTATCAAGAAAATGTTCCTCCAGGCCCATTTGCTATTACCAATTTATTCAATACATTACa          >  2:6781503/1‑93 (MQ=255)

                                                                               aaaGGTCACTGCCTCACAGAACAACCGTATTATTTATCAAGAAAATGTTCCTCCAGGCCCATTTGCTATTACCAATTTATTCAATACATTACa          >  1:2235276/1‑93 (MQ=255)

                                                                                 aGGTCACTGCCTCACAGAACAACCGTATTATTTATCAAGAAAATGTTCCTCCAGGCCCATTTGCTATTACCAATTTATTCAATACATTACAgg        <  2:4918233/93‑1 (MQ=255)

                                                                                 aGGTCACTGCCTCACAGAACAACCGTATTATTTATCAAGAAAATGTTCCTCCAGGCCCATTTGCTATTACCAATTTATTCAATACATTACAgg        <  1:5357128/93‑1 (MQ=255)

                                                                                 aGGTCACTGCCTCACAGAACAACCGTATTATTTATCAAGAAAATGTTCCTCCAGGCCCATTTGCTATTACCAATTTATTCAATACATTACAgg        >  1:5587420/1‑93 (MQ=255)

                                                                                  ggTCACTGCCTCACAGAACAACCGTATTATTTATCAAGAAAATGTTCCTCCAGGCCCATTTGCTATTATCAATTTATTCAATACATTACAggg       >  1:5667438/1‑93 (MQ=255)

                                                                                  ggTCACTGCCTCACAGAACAACCGTATTATTTATCAAGAAAATGTTCCTCCAGGCCCATTTGCTATTACCAATTTATTCAATACATTACAggg       >  2:2636357/1‑93 (MQ=255)

                                                                                   gTCACTGCCTCACAGAACAACCGTATTATTTATCAAGAAAATGTTCCTCCAGGCCCATTTGCTATTACCAATTTATTCAATACATTACAgggg      <  2:6873836/93‑1 (MQ=255)

                                                                                   gTCACTGCCTCACAGAACAACCGTATTATTTATCAAGAAAATGTTCCTCCAGGCCCATTTGCTATTACCAATTTATTCAATACATTACAgggg      >  1:352234/1‑93 (MQ=255)

                                                                                    tCACTGCCTCACAGAACAACCGTATTATTTATCAAGAAAATGTTCCTCCAGGCCCATTTGCTATTACCAATTTATTCAATACATTACAGGGGc     >  2:873648/1‑93 (MQ=255)

                                                                                      aCTGCCTCACAGAACAACCGTATTATTTATCAAGAAAATGTTCCTCCAGGCCCATTTGCTATTACCAATTTATTCAATACATTACAGGGGCaa   >  2:2329141/1‑93 (MQ=255)

                                                                                       cTGCCTCACAGAACAACCGTATTATTTATCAAGAAAATGTTCCTCCAGGCCCATTTGCTATTACCAATTTATTCAATACATTACAGGGGCAAc  >  1:7203689/1‑93 (MQ=255)

TGAAAAGCGATGAGAATATGTTACCGCCAGACCTACGTGGTTACGCACCGCAAATCACGGGTGTCGCACAAACGAATGCAAAGGTCACTGTCTCACAGAACAACCGTATTATTTATCAAGAAAATGTTCCTCCAGGCCCATTTGCTATTACCAATTTATTCAATACATTACAGGGGCAAC  >  NC_000913/3186176‑3186355

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 23 ≤` `ATCG/ATCG` `< 30 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`

GATK/CNVnator alignment

BRESEQ :: bam2aln output

CGTTGAAAAGCGATGAGAATATGTTACCGCCAGACCTACGTGGTTACGCACCGCAAATCACGGGTGTCGCACAAACGAATGCAAAGGTCACTGTCTCACAGAACAACCGTATTATTTATCAAGAAAATGTTCCTCCAGGCCCATTTGCTATTACCAATTTATTCAATACATTACAGGGGCAACTTG  >  NC_000913/3186173‑3186358

CGTTGAAAAGCGATGAGAATATGTTACCGCCAGACCTACGTGGTTACGCACCGCAAATCACGGGTGTCGCACAAACGAATGCAAAGGTCACTGC                                                                                              >  SRR4302543.6708824/1‑94 (MQ=60)

 GTTGAAAAGCGATGAGAATATGTTACCGCCAGACCTACGTGGTTACGCACCGCAAATCACGGGTGTCGCACAAACGAATGCAAAGGTCACTGCC                                                                                             >  SRR4302543.658879/1‑94 (MQ=60)

   TGAAAAGCGATGAGAATATGTTACCGCCAGACCTACGTGGTTACGCACCGCAAATCACGGGTGTCGCACAAACGAATGCAAAGGTCACTGCCTC                                                                                           >  SRR4302543.129314/1‑94 (MQ=60)

    GAAAAGCGATGAGAATATGTTACCGCCAGACCTACGTGGTTACGCACCGCAAATCACGGGTGTCGCACAAACGAATGCAAAGGTCACTGCCTCA                                                                                          <  SRR4302543.2877089/94‑1 (MQ=60)

     AAAAGCGATGAGAATATGTTACCGCCAGACCTACGTGGTTACGCACCGCAAATCACGGGTGTCGCACAAACGAATGCAAAGGTCACTGCCTCAC                                                                                         <  SRR4302543.2205940/94‑1 (MQ=60)

      AAAGCGATGAGAATATGTTACCGCCAGACCTACGTGGTTACGCACCGCAAATCGCGGGTGTCGCACAAACGAATGCAAAGGTCACTGCCTCACA                                                                                        <  SRR4302543.2683523/94‑1 (MQ=60)

      AAAGCGATGAGAATATGTTACCGCCAGACCTACGTGGTTACGCACCGCAAATCACGGGTGTCGCACAAACGAATGCAAAGGTCACTGCCTCACA                                                                                        >  SRR4302543.3534218/1‑94 (MQ=60)

      AAAGCGATGAGAATATGTTACCGCCAGACCTACGTGGTTACGCACCGCAAATCACGGGTGTCGCACAAACGAATGCAAAGGTCACTGCCTCACA                                                                                        >  SRR4302543.6005750/1‑94 (MQ=60)

      AAAGCGATGAGAATATGTTACCGCCAGACCTACGTGGTTACGCACCGCAAATCACGGGTGTCGCACAAACGAATGCAAAGGTCACTGCCTCACA                                                                                        <  SRR4302543.5574891/94‑1 (MQ=60)

      AAAGCGATGAGAATATGTTACCGCCAGACCTACGTGGTTACGCACCGCAAATCACGGGTGTCGCACAAACGAATGCAAAGGTCACTGCCTCACA                                                                                        >  SRR4302543.1363159/1‑94 (MQ=60)

      AAAGCGATGAGAATATGTTACCGCCAGACCTACGTGGTTACGCACCGCAAATCACGGGGGTCGCACAAACGAATGCAAAGGTAACTGCCTCACA                                                                                        >  SRR4302543.6005749/1‑94 (MQ=60)

       AAGCGATGAGAATATGTTACCGCCAGACCTACGTGGTTACGCACCGCAAATCACGGGTGTCGCACAAACGAATGCAAAGGTCACTGCCTCACAG                                                                                       <  SRR4302543.1316503/94‑1 (MQ=60)

       AAGCGATGAGAATATGTTACCGCCAGACCTACGTGGTTACGCACCGCAAATCACGGGTGTCGCACAAACAAATGCAAAGGTCACTGCCTCACAG                                                                                       <  SRR4302543.2985957/94‑1 (MQ=60)

        AGCGATGAGAATATGTTACCGCCAGACCTACGTGGTTACGCACCGCAAATCACGGGTGTCGCACAAACGAATGCAAAGGTCACTGCCTCACAGA                                                                                      >  SRR4302543.5762911/1‑94 (MQ=60)

        AGCGATGAGAATATGTTACCGCCAGACCTACGTGGTTACGCACCGCAAATCACGGGTGTCGCACAAACGAATGCAAAGGTCACTGCCTCACAGA                                                                                      >  SRR4302543.514060/1‑94 (MQ=60)

         GCGATGAGAATATGTTACCGCCAGACCTACGTGGTTACGCACCGCAAATCACGGGTGTCGCACAAACGAATGCAAAGGTCACTGCCTCACAGAA                                                                                     >  SRR4302543.4291243/1‑94 (MQ=60)

          CGATGAGAATATGTTACCGCCAGACCTACGTGGTTACGCACCGCAAATCACGGGTGTCGCACAAACGAATGCAAAGGTCACTGCCTCACAGAAC                                                                                    <  SRR4302543.6039696/94‑1 (MQ=60)

           GATGAGAATATGTTACCGCCAGCCCTACGTGGTTACGCACCGCAAATCACGGGTGTCGCACAAACGAATGCAAAGGTCACTGCCTCACAGAACA                                                                                   <  SRR4302543.4704920/94‑1 (MQ=60)

           GATGAGAATATGTTACCGCCAGACCTACGTGGTTACGCACCGCAAATCACGGGTGTCGCACAAACGAATGCAAAGGTCACTGCCTCACAGAACA                                                                                   >  SRR4302543.6929958/1‑94 (MQ=60)

           GATGAGAATATGTTACCGCCAGACCTACGTGGTTACGCACCGCAAATCACGGGTGTCGCACAAACGAATGCAAAGGTCACTGCCTCACAGAACA                                                                                   >  SRR4302543.1397713/1‑94 (MQ=60)

            ATGAGAATATGTTACCGCCAGACCTACGTGGTTACGCACCGCAAATCACGGGTGTCGCACAAACGAATGCAAAGGTCACTGCCTCACAGAACAA                                                                                  >  SRR4302543.226233/1‑94 (MQ=60)

            ATGAGAATATGTTACCGCCAGACCTACGTGGTTACGCACCGCAAATCACGGGTGTCGCACAAACGAATGCAAAGGTCACTGCCTCACAGAACAA                                                                                  >  SRR4302543.7383079/1‑94 (MQ=60)

             TGAGAATATGTTACCGCCAGACCTACGTGGTTACGCACCGCAAATCACGGGTGTCGCACAAACGAATGCAAAGGTCACTGCCTCACAGAACAAC                                                                                 >  SRR4302543.532011/1‑94 (MQ=60)

             TGAGAATATGTTACCGCCAGACCTACGTGGTTACGCACCGCAAATCACGGGTGTCGCACAAACGAATGCAAAGGTCACTGCCTCACAGAACAAC                                                                                 <  SRR4302543.1631324/94‑1 (MQ=60)

             TGAGAATATGTTACCGCCAGACCTACGTGGTTACGCACCGCAAATCACGGGTGTCGCACAAACGAATGCAAAGGTCACTGCCTCACAGAACAAC                                                                                 >  SRR4302543.1836228/1‑94 (MQ=60)

              GAGAATATGTTACCGCCAGACCTACGTGGTTACGCACCGCAAATCACGGGTGTCGCACAAACGAATGCAAAGGTCACTGCCTCACAGAACAACC                                                                                >  SRR4302543.5294749/1‑94 (MQ=60)

              GAGAATATGTTACCGCCAGACCTACGTGGTTACGCACCGCAAATCACGGGTGTCGCACAAACGAATGCAAAGGTCACTGCCTCACAGAACAACC                                                                                <  SRR4302543.1315764/94‑1 (MQ=60)

               AGAATATGTTACCGCCAGACCTACGTGGTTACGCACCGCAAATCACGGGTGTCGCACAAACGAATGCAAAGGTCACTGCCTCACAGAACAACCG                                                                               >  SRR4302543.7333571/1‑94 (MQ=60)

                GAATATGTTACCGCCAGACCTACGTGGTTACGCACCGCAAATCACGGGTGTCGCACATACGAATGCAAAGGTCACTGCCTCACAGAACAACCGT                                                                              >  SRR4302543.5470189/1‑94 (MQ=60)

                GAATATGTTACCGCCAGACCTACGTGGTTACGCACCGCAAATCACGGGTGTCGCACAAACGAATGCAAAGGTCACTGCCTCACAGAACAACCGT                                                                              >  SRR4302543.6001139/1‑94 (MQ=60)

                GAATATGTTACCGCCAGACCTACGTGGTTACGCACCGCAAATCACGGGTGTCGCACAAACGAATGCAAAGGTCACTGCCTCACAGAACAACCGT                                                                              <  SRR4302543.2752270/94‑1 (MQ=60)

                 AATATGTTACCGCCAGACCTACGTGGTTACGCACCGCAAATCACGGGTGTCGCACAAACGAATGCAAAGGTCACTGCCTCACAGAACAACCGTA                                                                             >  SRR4302543.7945598/1‑94 (MQ=60)

                 AATATGTTACCGCCAGACCTACGTGGTTACGCACCGCAAATCACGGGTGTCGCACAAACGAATGCAAAGGTCACCGCCTCACAGAACAACCGTT                                                                             >  SRR4302543.6135671/1‑94 (MQ=60)

                  ATATGTTACCGCCAGACCTACGTGGTTACGCACCGCAAATCACGGGTGTCGCACAAACGAATGCAAAGGTCACTGCCTCACAGAACAACCGTAT                                                                            <  SRR4302543.5120478/94‑1 (MQ=60)

                   TATGTTACCGCCAGACCTACGTGGTTACGCACCGCAAATCACGGGTGTCGCACAAACGAATGCAAAGGTCACTGCCTCACAGAACAACCGTATT                                                                           <  SRR4302543.7392050/94‑1 (MQ=60)

                   TATGTTACCGCCAGACCTACGTGGTTACGCACCGCAAATCACGGGTGTCGCACAAACGAATGCAAAGGTCACTGCCTCACAGAACAACCGTATT                                                                           >  SRR4302543.4723992/1‑94 (MQ=60)

                    ATGTTACCGCCAGACCTACGTGGTTACGCACCGCAAATCACGGGTGTCGCACAAACGAATGCAAAGGTCACTGCCTCACAGAACAACCGTATTA                                                                          >  SRR4302543.2722095/1‑94 (MQ=60)

                    ATGTTACCGCCAGACCTACGTGGTTACGCACCGCAAATCACGGGTGTCGCACAAACGAATGCAAAGGTCACTGCCTCACAGAACAACCGTATTA                                                                          >  SRR4302543.5304096/1‑94 (MQ=60)

                    ATGTTACCGCCAGACCTACGTGGTTACGCACCGCAAATCACGGGTGTCGCACAAACGAATGCAAAGGTCACTGCCTCACAGAACAACCGTATTA                                                                          <  SRR4302543.3540251/94‑1 (MQ=60)

                     TGTTACCGCCAGACCTACGTGGTTACGCACCGCAAATCACGGGTGTCGCACAAACGAATGCAAAGGTCACTGCCTCACAGAACAACCGTATTAT                                                                         >  SRR4302543.7366552/1‑94 (MQ=60)

                     TGTTACCGCCAGACCTACGTGGTTACGCACCGCAAATCACGGGTGTCGCACAAACGAATGCAAAGGTCACTGCCTCACAGAACAACCGTATTAT                                                                         >  SRR4302543.5148369/1‑94 (MQ=60)

                     TGTTACCGCCAGACCTACGTGGTTACGCACCGCAAATCACGGGTGTCGCACAAACGAATGCAAAGGTCACTGCCTCACAGAACAACCGTATTAT                                                                         >  SRR4302543.3508622/1‑94 (MQ=60)

                      GTTACCGCCAGACCTACGTGGTTACGCACCGCAAATCACGGGTGTCGCACAAACGAATGCAAAGGTCACTGCCTCACAGAACAACCGTATTATT                                                                        >  SRR4302543.2479669/1‑94 (MQ=60)

                      GTTACCGCCAGACCTACGTGGTTACGCACCGCAAATCACGGGTGTCGCACAAACGAATGCAAAGGTCACTGCCTCACAGAACAACCGTATTATT                                                                        >  SRR4302543.2308171/1‑94 (MQ=60)

                      GTTACCGCCAGACCTACGTGGTTACGCACCGCAAATCACGGGTGTCGCACAAACGAATGCAAAGGTCACTGCCTCACAGAACAACCGTATTATT                                                                        >  SRR4302543.2308170/1‑94 (MQ=60)

                      GTTACCGCCAGACCTACGTGGTTACGCACCGCAAATCACGGGTGTCGCACAAACGAATGCAAAGGTCACTGCCTCACAGAACAACCGTATTATT                                                                        >  SRR4302543.3193851/1‑94 (MQ=60)

                      GTTACCGCCAGACCTACGTGGTTACGCACCGCAAATCACGGGTGTCGCACAAACGAATGCAAAGGTCACTGCCTCACAGAACAACCGTATTATT                                                                        <  SRR4302543.1599796/94‑1 (MQ=60)

                      GTTACCGCCAGACCTACGTGGTTACGCACCGCAAATCACGGGTGTCGCACAAACGAATGCAAAGGTCACTGCCTCACAGAACAACCGTATTATT                                                                        >  SRR4302543.3193850/1‑94 (MQ=60)

                      GTTACCGCCAGACCTACGCGGTTACGCACCGCAAATCACGGGTGTCGCACAAACGAATGCAAAGGTCACTGCCTCACAGAACAACCGTATTATT                                                                        <  SRR4302543.1599797/94‑1 (MQ=60)

                       TTGCCGCCAGACCTACGTGGTTACGCACCGCAAATCACGGGTGTCGCACAAACGAATGCAAAGGTCACTGCCTCACAGAACAACCGTATTATTT                                                                       <  SRR4302543.6169146/94‑1 (MQ=60)

                        TACCGCCAGACCTACGTGGTTACGCACCGCAAATCACGGGTGTCGCACAAACGAATGCAAAGGTCACTGCCTCACAGAACAACCGTATTATTTA                                                                      <  SRR4302543.5609382/94‑1 (MQ=60)

                        TACCGCCAGACCTACGTGGTTACGCACCGCAAATCACGGGTGTCGCACAAACGAATGCAAAGGTCACTGCCTCACAGAACAACCGTATTATTTA                                                                      <  SRR4302543.3969642/94‑1 (MQ=60)

                         ACCGCCAGACCTACGTGGTTACGCACCGCAAATCACGGGTGTCGCACAAACGAATGCAAAGGTCACTGCCTCACAGAACAACCGTATTATTTAT                                                                     >  SRR4302543.3135417/1‑94 (MQ=60)

                           CGCCAGACCTACGTGGTTACGCACCGCAAATCACGGGTGTCGCACAAACGAATGCAAAGGTCACTGCCTCACAGAACAACCGTATTATTTATCA                                                                   >  SRR4302543.4047951/1‑94 (MQ=60)

                           CGCCAGACCTACGTGGTTACGCACCGCAAATCACGGGTGTCGCACAAACGAATGCAAAGGTCACTGCCTCACAGAACAACCGTATTATTTATCA                                                                   >  SRR4302543.4905598/1‑94 (MQ=60)

                            GCCAGACCTACGTGGTTACGCACCGCAAATCACGGGTGTCGCACAAACGAATGCAAAGGTCACTGCCTCACAGAACAACCGTATTATTTATCAA                                                                  >  SRR4302543.7337413/1‑94 (MQ=60)

                            GCCAGACCTACGTGGTTACGCACCGCAAATCACGGGTGTCGCACAAACGAATGCAAAGGTCACTGCCTCACAGAACAACCGTATTATTTATCAA                                                                  >  SRR4302543.4023487/1‑94 (MQ=60)

                            GCCAGACCTACGTGGTTACGCACCGCAAATCACGGGTGTCGCACAAACGAATGCAAAGGTCACTGCCTCACAGAACAACCGTATTATTTATCAA                                                                  <  SRR4302543.507555/94‑1 (MQ=60)

                            GCCAGACCTACGTGGTTACGCACCGCAAATCACGGGTGTCGCACAAACGAATGCAAAGGTCACTGCCTCACAGAACAACCGTATTATTTATCAA                                                                  >  SRR4302543.4023488/1‑94 (MQ=60)

                             CCAGACCTACGTGGTTACGCACCGCAAATCACGGGTGTCGCACAAACGAATGCAAAGGTCACTGCCTCACAGAACAACCGTATTATTTATCAAG                                                                 >  SRR4302543.5048823/1‑94 (MQ=60)

                             CCAGACCTACGTGGTTACGCACCGCAAATCACGGGTGTCGCACAAACGAATGCAAAGGTCACTGCCTCACAGAACAACCGTATTATTTATCAAG                                                                 <  SRR4302543.3597471/94‑1 (MQ=60)

                             CCAGACCTACGTGGTTACGCACCGCAAATCACGGGTGTCGCACAAACGAATGCAAAGGTCACTGCCTCACACAACAACCGTATTATTTATCAAG                                                                 >  SRR4302543.4643959/1‑94 (MQ=60)

                              CAGACCTACGTGGTTACGCACCGCAAATCACGGGTGTCGCACAAACGAATGCAAAGGTCACTGCCTCACAGAACAACCGTATTATTTATCAAGA                                                                <  SRR4302543.1761421/94‑1 (MQ=60)

                               AGACCTACGTGGTTACGCACCGCAAATCACGGGTGTCGCACAAACGAATGCAAAGGTCACTGCCTCACAGAACAACCGTATTATTTATCAAGAA                                                               <  SRR4302543.812896/94‑1 (MQ=60)

                                 ACCTACGTGGTTACGCACCGCAAATCACGGGTGTCGCACAAACGAATGCAAAGGTCACTGCCTCACAGAACAACCGTATTATTTATCAAGAAAA                                                             <  SRR4302543.3716187/94‑1 (MQ=60)

                                  CCTACGTGGTTACGCACCGCAAATCACGGGTGTCGCACAAACGAATGCAAAGGTCACTGCCTCACAGAACAACCGTATTATTTATCAAGAAAAT                                                            <  SRR4302543.3305595/94‑1 (MQ=60)

                                  CCTACGTGGTTACGCACCGCAAATCACGGGTGTCGCACAAACGAATGCAAAGGTCACTGCCTCACAGAACAACCGTATTATTTATCAAGAAAAT                                                            >  SRR4302543.2763423/1‑94 (MQ=60)

                                  CCTACGTGGTTACGCACCGCAAATCACGGGTGTCGCACAAACGAATGCAAAGGTCACTGCCTCACAGAACAACCGTATTATTTATCAAGAAAAT                                                            <  SRR4302543.804325/94‑1 (MQ=60)

                                  CCTACGTGCTTACGCACCGCAAATCACGGGTGTCGCACAAACGAATGCAAAGGTCACTGCCTCACAGAACAACCGTATTATTTATCAAGAAAAT                                                            <  SRR4302543.3225834/94‑1 (MQ=60)

                                   CTACGTGGTTACGCACCGCAAATCACGGGTGTCGCACAAACGAATGCAAAGGTCACTGCCTCACAGAACAACCGTATTATTTATCAAGAAAATG                                                           <  SRR4302543.5627597/94‑1 (MQ=60)

                                   CTACGTGGTTACGCACCGCAAATCACGGGTGTCGCACAAACGAATGCAAAGGTCACTGCCTCACAGAACAACCGTATTATTTATCAAGAAAATG                                                           <  SRR4302543.5832459/94‑1 (MQ=60)

                                   CTACGTGGTTACGCACCGCAAATCACGGGTGTCGCACAAACGAATGCAAAGGTCACTGCCTCACAGAACAACCGTATTATTTATCAAGAAAATG                                                           <  SRR4302543.4170214/94‑1 (MQ=60)

                                    TACGTGGTTACGCACCGCAAATCACGGGTGTCGCACAAACGAATGCAAAGGTCACTGCCTCACAGAACAACCGTATTATTTATCAAGAAAATGT                                                          >  SRR4302543.7718250/1‑94 (MQ=60)

                                     ACGTGGTTACGCACCGCAAATCACGGGTGTCGCACAAACGAATGCAAAGGTCACTGCCTCACAGAACAACCGTATTATTTATCAAGAAAATGTT                                                         >  SRR4302543.553664/1‑94 (MQ=60)

                                     ACGTGGTTACGCACCGCAAATCACGGGTGTCGCACAAACGAATGCAAAGGTCACTGCCTCACAGAACAACCGTATTATTTATCAAGAAAATGTT                                                         >  SRR4302543.762852/1‑94 (MQ=60)

                                     ACGTGGTTACGCACCGCAAATCACGGGTGTCGCACAAACGAATGCAAAGGTCACTGCCTCACAGAACAACCGTATTATTTATCAAGAAAATGTT                                                         >  SRR4302543.6413437/1‑94 (MQ=60)

                                      CGTGGTTACGCACCGCAAATCACGGGTGTCGCACAAACGAATGCAAAGGTCACTGCCTCACAGAACAACCGTATTATTTATCAAGAAAATGTTC                                                        <  SRR4302543.3249314/94‑1 (MQ=60)

                                      CGTGGTTACGCACCGCAAATCACGGGTGTCGCACAAACGAATGCAAAGGTCACTGCCTCACAGAACAACCGTATTATTTATCAAGAAAATGTTC                                                        <  SRR4302543.4918328/94‑1 (MQ=60)

                                      CGTGGTTACGCACCGCAAATCACGGGTGTCGCACAAACGAATGCAAAGGTCACTGCCTCACAGAACAACCGTATTATTTATCAAGAAAATGTTC                                                        <  SRR4302543.3249313/94‑1 (MQ=60)

                                       GTGGTTACGCACCGCAAATCACGGGTGTCGCACAAACGAATGCAAAGGTCACTGCCTCACAGAACAACCGTATTATTTATCAAGAAAATGTTCC                                                       <  SRR4302543.488460/94‑1 (MQ=60)

                                       GTGGTTACGCACCGCAAATCACGGGTGTCGCACAAACGAATGCAAAGGTCACTGCCTCACAGAACAACCGTATTATTTATCAAGAAAATGTTCC                                                       <  SRR4302543.6224054/94‑1 (MQ=60)

                                       GTGGTTACGCACCGCAAATCACGGGTGTCGCACAAACGAATGCAAAGGTCACTGCCTCACAGAACAACCGTATTATTTATCAAGAAAATGTTCC                                                       >  SRR4302543.724951/1‑94 (MQ=60)

                                       GTGGTTACGCACCGCAAATCACGGGTGTCGCACAAACGAATGCAAAGGTCACTGCCTCACAGAACAACCGTATTATTTATCAAGAAAATGTTCC                                                       >  SRR4302543.2346198/1‑94 (MQ=60)

                                        TGGTTACGCACCGCAAATCACGGGTGTCGCACAAACGAATGCAAAGGTCACTGCCTCACAGAACAACCGTATTATTTATCAAGAAAATGTTCCT                                                      <  SRR4302543.6999436/94‑1 (MQ=60)

                                        TGGTTACGCACCGCAAATCACGGGTGTCGCACAAACGAATGCAAAGGTCACTGCCTCACAGAACAACCGTATTATTTATCAAGAAAATGTTCCT                                                      <  SRR4302543.6402083/94‑1 (MQ=60)

                                        TGGTTACGCACCGCAAATCACGGGTGTCGCACAAACGAATGCAAAGGTCACTGCCTCACAGAACAACCGTATTATTTATCAAGAAAATGTTCCT                                                      <  SRR4302543.487180/94‑1 (MQ=60)

                                        GGGTTACGCGCCGCAAATCACGGGTGTCGCACAAACGAATGCAAAGGTCACTGCCTCACAGAACAACCGTATTATTTATCAAGAAAATGTTCCT                                                      <  SRR4302543.6999437/94‑1 (MQ=60)

                                         GGTTACGCACCGCAAATCACGGGTGTCGCACAAACGAATGCAAAGGTCACTGCCTCACAGAACAACCGTATTATTTATCAAGAAAATGTTCCTC                                                     >  SRR4302543.6823909/1‑94 (MQ=60)

                                         GGTTACGCACCGCAAATCACGGGTGTCGCACAAACGAATGCAAAGGTCACTGCCTCACAGAACAACCGTATTATTTATCAAGAAAATGTTCCTC                                                     >  SRR4302543.6289350/1‑94 (MQ=60)

                                         GGTTACGCACCGCAAATCACGGGTGTCGCACAAACGAATGCAAAGGTCACTGCCTCACAGAACAACCGTATTATTTATCAAGAAAATGTTCCTC                                                     >  SRR4302543.1906056/1‑94 (MQ=60)

                                          GTTACGCACCGCAAATCACGGGTGTCGCACAAACGAATGCAAAGGTCACTGCCTCACAGAACAACCGTATTATTTATCAAGAAAATGTTCCTCC                                                    >  SRR4302543.7435544/1‑94 (MQ=60)

                                          GTTACGCACCGCAAATCACGGGTGTCGCACAAACGAATGCAAAGGTCACTGCCTCACAGAACAACCGTATTATTTATCAAGAAAATGTTCCTCC                                                    <  SRR4302543.3682191/94‑1 (MQ=60)

                                          GTTACGCACCGCAAATCACGGGTGTCGCACAAACGAATGCAAAGGTCACTGCCTCACAGAACAACCGTATTATTTATCAAGAAAATGTTCCTCC                                                    <  SRR4302543.542917/94‑1 (MQ=60)

                                           TTACGCACCGCAAATCACGGGTGTCGCACAAACGAATGCAAAGGTCACTGCCTCACAGAACAACCGTATTATTTATCAAGAAAATGTTCCTCCA                                                   <  SRR4302543.6167691/94‑1 (MQ=60)

                                           TTACGCACCGCAAATCACGGGTGTCGCACAAACGAATGCAAAGGTCACTGCCTCACAGAACAACCGTATTATTTATCAAGAAAATGTTCCTCCA                                                   <  SRR4302543.4321782/94‑1 (MQ=60)

                                           TTACGCACCGCAAATCACGGGTGTCGCACAAACGAATGCAAAGGTCACTGCCTCACAGAACAACCGTATTATTTATCAAGAAAATGTTCCTCCA                                                   <  SRR4302543.4621018/94‑1 (MQ=60)

                                             ACGCACCGCAAATCACGGGTGTCGCACAAACGAATGCAAAGGTCACTGCCTCACAGAACAACCGTATTATTTATCAAGAAAATGTTCCTCCAGG                                                 <  SRR4302543.2641967/94‑1 (MQ=60)

                                              CGCACCGCAAATCAGGGGTGTCGCACAAACGAATGCAAAGGTCACTGCCTCACAGAACAACCGTATTATTTATCAAGAAAATGTTCCTCCAGGC                                                >  SRR4302543.5272999/1‑94 (MQ=60)

                                              CGCACCGCAAATCACGGGTGTCGCACAAACGAATGCAAAGGTCACTGCCTCACAGAACAACCGTATTATTTATCAAGAAAATGTTCCTCCAGGC                                                >  SRR4302543.6778930/1‑94 (MQ=60)

                                              CGCACCGCAAATCACGGGTGTCGCACAAACGAATGCAAAGGTCACTGCCTCACAGAACAACCGTATTATTTATCAAGAAAATGTTCCTCCAGGC                                                <  SRR4302543.1113992/94‑1 (MQ=60)

                                               GCACCGCAAATCACGGGTGTCGCACAAACGAATGCAAAGGTCACTGCCTCACAGAACAACCGTATTATTTATCAAGAAAATGTTCCTCCAGGCC                                               <  SRR4302543.6325198/94‑1 (MQ=60)

                                                CACCGCAAATCACGGGTGTCGCACAAACGAATGCAAAGGTCACTGCCTCACAGAACAACCGTATTATTTATCAAGAAAATGTTCCTCCAGGCCC                                              >  SRR4302543.1795628/1‑94 (MQ=60)

                                                CACCGCAAATCACGGGTGTCGCACAAACGAATGCAAAGGTCACTGCCTCACAGAACAACCGTATTATTTATCAAGAAAATGTTCCTCCAGGCCC                                              >  SRR4302543.6024916/1‑94 (MQ=60)

                                                  CCGCAAATCACGGGTGTCGCACAAACGAATGCAAAGGTCACTGCCTCACAGAACAACCGTATTATTTATCAAGAAAATGTTCCTCCAGGCCCAT                                            >  SRR4302543.2751957/1‑94 (MQ=60)

                                                  CCGCAAATCACGGGTGTCGCACAAACGAATGCAAAGGTCACTGCCTCACAGAACAACCGTATTATTTATCAAGAAAATGTTCCTCCAGGCCCAT                                            <  SRR4302543.2208770/94‑1 (MQ=60)

                                                  CCGCAAATCACGGGTGTCGCACAAACGAATGCAAAGGTCACTGCCTCACAGAACAACCGTATTATTTATCAAGAAAATGTTCCTCCAGGCCCAT                                            <  SRR4302543.7582823/94‑1 (MQ=60)

                                                   CGCAAATCACGGGTGTCGCACAAACGAATGCAAAGGTCACTGCCTCACAGAACAACCGTATTATTTATCAAGAAAATGTTCCTCCAGGCCCATT                                           >  SRR4302543.6968235/1‑94 (MQ=60)

                                                   CGCAAATCACGGGTGTCGCACAAACGAATGCAAAGGTCACTGCCTCACAGAACAACCGTATTATTTATCAAGAAAATGTTCCTCCAGGCCCATT                                           >  SRR4302543.7604337/1‑94 (MQ=60)

                                                   CGCAAATCACGGGTGTCGCACAAACGAATGCAAAGGTCACTGCCTCACAGAACAACCGTATTATTTATCAAGAAAATGTTCCTCCAGGCCCATT                                           >  SRR4302543.7604336/1‑94 (MQ=60)

                                                    GCAAATCACGGGTGTCGCACAAACGAATGCAAAGGTCACTGCCTCACAGAACAACCGTATTATTTATCAAGAAAATGTTCCTCCAGGCCCATTT                                          <  SRR4302543.762795/94‑1 (MQ=60)

                                                    GCAAATCACGGGTGTCGCACAAACGAATGCAAAGGTCACTGCCTCACAGAACAACCGTATTATTTATCAAGAAAATGTTCCTCCAGGCCCATTT                                          >  SRR4302543.2597182/1‑94 (MQ=60)

                                                     CAAATCACGGGTGTCGCACAAACGAATGCAAAGGTCACTGCCTCACAGAACAACCGTATTATTTATCAAGAAAGTGTTCCTCGAGGCCCATTTG                                         >  SRR4302543.6509395/1‑94 (MQ=60)

                                                      AAATCACGGGTGTCGCACAAACGAATGCAAAGGTCACTGCCTCACAGAACAACCGTATTATTTATCAAGAAAATGTTCCTCCAGGCCCATTTGC                                        >  SRR4302543.4737194/1‑94 (MQ=60)

                                                      AAATCACGGGTGTCGCACAAACGAATGCAAAGGTCACTGCCTCACAGAACAACCGTATTATTTATCAAGAAAATGTTCCTCCAGGCCCATTTGC                                        >  SRR4302543.184041/1‑94 (MQ=60)

                                                       AATCACGGGTGTCGCACAAACGAATGCAAAGGTCACTGCCTCACAGAACAACCGTATTATTTATCAAGAAAATGTTCCTCCAGGCCCATTTGCT                                       >  SRR4302543.7051048/1‑94 (MQ=60)

                                                        ATCACGGGTGTCGCACAAACGAATGCAAAGGTCACTGCCTCACAGAACAACCGTATTATTTGTCAAGAAAATGTTCCTCCAGGCCCATTTGCTA                                      >  SRR4302543.340660/1‑94 (MQ=60)

                                                        ATCACGGGTGTCGCACAAACGAATGCAAAGGTCACTGCCTCACAGAACAACCGTATTATTTATCAAGAAAATGTTCCTCCAGGCCCATTTGCTA                                      >  SRR4302543.251948/1‑94 (MQ=60)

                                                         TCACGGGTGTCGCACAAACGAATGCAAAGGTCACTGCCTCACAGAACAACCGTATTATTTATCAAGAAAATGTTCCTCCAGGCCCATTTGCTAT                                     <  SRR4302543.7209106/94‑1 (MQ=60)

                                                         TCACGGGTGTCGCACAAACGAATGCAAAGGTCACTGCCTCACAGAACAACCGTATTATTTATCAAGAAAATGTTCCTCCAGGCCCATTTGCTAT                                     <  SRR4302543.2147687/94‑1 (MQ=60)

                                                          CACGGGTGTCGCACAAACGAATGCAAAGGTCACTGCCTCACAGAACAACCGTATTATTTATCAAGAAAATGTTCCTCCAGGCCCATTTGCTATT                                    <  SRR4302543.7453121/94‑1 (MQ=60)

                                                          CACGGGTGTCGCACAAACGAATGCAAAGGTCACTGCCTCACAGAACAACCGTATTATTTATCAAGAAAATGTTCCTCCAGGCCCATTTGCTATT                                    <  SRR4302543.1137015/94‑1 (MQ=60)

                                                          CACGGGTGTCGCACAAACGAATGCAAAGGTCACTGCCTCACAGAACAACCGTATTATTTATCAAGAAAATGTTCCTCCAGGCCCATTTGCTATT                                    <  SRR4302543.6232649/94‑1 (MQ=60)

                                                           CCGGGTGTCGCACAAACGAATGCAAAGGTCACTGCCTCACAGAACAACCGTATTATTTATCAAGAAAATGTTCCTCCAGGCCCATTTGCTATTA                                   <  SRR4302543.6852200/94‑1 (MQ=60)

                                                           ACGGGTGTCGCACAAACGAATGCAAAGGTCACTGCCTCACAGAACAACCGTATTATTTATCAAGAAAATGTTCCTCCAGGCCCATTTGCTATTA                                   <  SRR4302543.6405410/94‑1 (MQ=60)

                                                            CGGGTGTCGCACAAACGAATGCAAAGGTCACTGCCTCACAGAACAACCGTATTATTTATCAAGAAAATGTTCCTCCAGGCCCATTTGCTATTAC                                  <  SRR4302543.1736423/94‑1 (MQ=60)

                                                            CGGGGGTGGCACAAACGAATGCAAAGGTCACTGCCTCACAGAACAACCGTATTATTTATCAAGAAAATGTTCCACCAGGCCCATTTGCTATTAC                                  <  SRR4302543.6706371/94‑1 (MQ=60)

                                                              GGTGTCGCACAAACGAATGCAAAGGTCACTGCCTCACAGAACAACCGTATTATTTATCAAGAAAATGTTCCTCCAGGCCCATTTGCTATTACCA                                <  SRR4302543.6945937/94‑1 (MQ=60)

                                                              GGTGTCGCACAAACGAATGCAAAGGTCACTGCCTCACAGAACAACCGTATTATTTATCAAGAAAATGTTCCTCCAGGCCCATTTGCTATTACCA                                <  SRR4302543.1956766/94‑1 (MQ=60)

                                                              GGTGTCGCACAAACGAATGCAAAGGTCACTGCCTCACAGAACAACCGTATTATTTATCAAGAAAATGTTCCTCCAGGCCCATTTGCTATTACCA                                <  SRR4302543.4253993/94‑1 (MQ=60)

                                                               GTGTCGCACAAACGAATGCAAAGGTCACTGCCTCACAGAACAACCGTATTATTTATCAAGAAAATGTTCCTCCAGGCCCATTTGCTATTACCAA                               <  SRR4302543.5097023/94‑1 (MQ=60)

                                                                 GTCGCACAAACGAATGCAAAGGTCACTGCCTCACAGAACAACCGTATTATTTATCAAGAAAATGTTCCTCCAGGCCCATTTGCTATTACCAATT                             <  SRR4302543.4777107/94‑1 (MQ=60)

                                                                 GTCGCACAAACGAATGCAAAGGTCACTGCCTCACAGAACAACCGTATTATTTATCAAGAAAATGTTCCTCCAGGCCCATTTGCTATTACCAATT                             >  SRR4302543.3058149/1‑94 (MQ=60)

                                                                 GTCGCACAAACGAATGCAAAGGTCACTGCCTCACAGAACAACCGTATTATTTATCAAGAAAATGTTCCTCCAGGCCCATTTGCTATTACCAATT                             >  SRR4302543.6131447/1‑94 (MQ=60)

                                                                  TCGCACAAACGAATGCAAAGGTCACTGCCTCACAGAACAACCGTATTATTTATCAAGAAAATGTTCCTCCAGGCCCATTTGCTATTACCAATTT                            <  SRR4302543.7649495/94‑1 (MQ=60)

                                                                   CGCACAAACGAATGCAAAGGTCACTGCCTCACAGAACAACCGTATTATTTATCAAGAAAATGTTCCTCCAGGCCCATTTGCTATTACCAATTTA                           >  SRR4302543.4697144/1‑94 (MQ=60)

                                                                   CGCACAAACGAATGCAAAGGTCACTGCCTCACAGAACAACCGTATTATTTATCAAGAAAATGTTCCTCCAGGCCCATTTGCTATTACCAATTTA                           >  SRR4302543.575317/1‑94 (MQ=60)

                                                                    GCACAAACGAATGCAAAGGTCACTGCCTCACAGAACAACCGTATTATTTATCAAGAAAATGTTCCTCCAGGCCCATTTGCTATTACCAATTTAT                          <  SRR4302543.7577212/94‑1 (MQ=60)

                                                                    GCACAAACGAATGCAAAGGTCACTGCCTCACAGAACAACCGTATTATTTATCAAGAAAATGTTCCTCCAGGCCCATTTGCTATTACCAATTTAT                          <  SRR4302543.7462241/94‑1 (MQ=60)

                                                                     CACAAACGAATGCAAAGGTCACTGCCTCACAGAACAACCGTATTATTTATCAAGAAAATGTTCCTCCAGGCCCATTTGCTATTACCAATTTATT                         <  SRR4302543.6721634/94‑1 (MQ=60)

                                                                     CACAAACGAATGCAAAGGTCACTGCCTCACAGAACAACCGTATTATTTATCAAGAAAATGTTCCTCCAGGCCCATTTGCTATTACCAATTTATT                         >  SRR4302543.5185883/1‑94 (MQ=60)

                                                                      ACAAACGAATGCAAAGGTCACTGCCTCACAGAACAACCGTATTATTTATCAAGAAAATGTTCCTCCAGGCCCATTTGCTATTACCAATTTATTC                        >  SRR4302543.1003892/1‑94 (MQ=60)

                                                                      ACAAACGAATGCAAAGGTCACTGCCTCACAGAACAACCGTATTATTTATCAAGAAAATGTTCCTCCAGGCCCATTTGCTATTACCAATTTATTC                        >  SRR4302543.2496517/1‑94 (MQ=60)

                                                                      ACAAACGAATGCAAAGGTCACTGCCTCACAGAACAACCGTATTATTTATCAAGAAAATGTTCCTCCAGGCCCATTTGCTATTACCAATTTATTC                        >  SRR4302543.5842028/1‑94 (MQ=60)

                                                                      ACAAACGAATGCAAAGGTCACTGCCTCACAGAACAACCGTATTATTTATCAAGAAAATGTTCCTCCAGGCCCATTTGCTATTACCAATTTATTC                        >  SRR4302543.2703107/1‑94 (MQ=60)

                                                                      ACAAACGAATGCAAAGGTCACTGCCTCACAGAACAACCGTATTATTTATCAAGAAAATGTTCCTCCAGGCCCATTTGCTATTACCAATTTATTC                        >  SRR4302543.2823666/1‑94 (MQ=60)

                                                                      ACAAACGAATGCAAAGGTCACTGCCTCACAGAACAAACGTATTATTTATCAAGAAAATGTTACTCCAGGCCCATTTGCTATTcccagctcattc                        >  SRR4302543.1003891/1‑82 (MQ=60)

                                                                       CAAACTAATGCAAAGGTCACTGCCTCACAGAACAACCGTATTATTTATCAAGAAAATGTTCCTCCAGGCCCATTTGCTATTACCAATTTATTCA                       <  SRR4302543.2669207/94‑1 (MQ=60)

                                                                       CAAACGAATGCAAAGGTCACTGCCTCACAGAACAACCGTATTATTTATCAAGAAAATGTTCCTCCAGGCCCATTTGCTATTACCAATTTATTCA                       >  SRR4302543.5290227/1‑94 (MQ=60)

                                                                        AAACGAATGCAAAGGTCACTGCCTCACAGAACAACCGTATTATTTATCAAGAAAATGTTCCTCCAGGCCCATTTGCTATTACCAATTTATTCAA                      <  SRR4302543.3535899/94‑1 (MQ=60)

                                                                        AAACGAATGCAAAGGTCACTGCCTCACAGAACAACCGTATTATTTATCAAGAAAATGTTCCTCCAGGCCCATTTGCTATTACCAATTTATTCAA                      >  SRR4302543.7267388/1‑94 (MQ=60)

                                                                        AAACGAATGCAAAGGTCACTGCCTCACAGAACAACCGTATTATTTATCAAGAAAATGTTCCTCCAGGCCCATTTGCTATTACCAATTTATTCAA                      <  SRR4302543.705704/94‑1 (MQ=60)

                                                                        AAACGAATGCAAAGGTCACTGCCTCACAGAACAACCGTATTATTTATCAAGAAAATGTTCCTCCAGGCCCATTTGCTATTACCAATTTATTCAA                      >  SRR4302543.4762265/1‑94 (MQ=60)

                                                                         AACGAATGCAAAGGTCACTGCCTCACAGAACAACCGTATTATTTATCAAGAAAATGTTCCTCCAGGCCCATTTGCTATTACCAATTTATTCAAT                     <  SRR4302543.7483413/94‑1 (MQ=60)

                                                                         AACGAAGGCAAAGGTCTCTGCCTCCAAGAACAACCGTATTATTTATCAAGAAAATGTTCCTCCAGGCCCATTTGCTATTACCAATTTATTCAAT                     <  SRR4302543.4774213/94‑1 (MQ=60)

                                                                          ACGAATGCAAAGGTCACTGCCTCACAGAACAACCGTATTATTTATCAAGAAAATGTTCCTCCAGGCCCATTTGCTATTACCAATTTATTCAATA                    <  SRR4302543.1850260/94‑1 (MQ=60)

                                                                           CGAATGCAAAGGTCACTGCCTCACAGAACAACCGTATTATTTATCAAGAAAATGTTCCTCCAGGCCCATTTGCTATTACCAATTTATTCgctac                   >  SRR4302543.6176724/1‑89 (MQ=60)

                                                                           CGAATGCAAAGGTCACTGCCTCACAGAACAACCGTATTATTTATCAAGAAAATGTTCCTCCAGGCCCATTTGCTATTACCAATTTATTCAATAC                   >  SRR4302543.1003978/1‑94 (MQ=60)

                                                                           CGAATGCAAAGGTCACTGCCTCACAGAACAACCGTATTATTTATCAAGAAAATGTTCCTCCAGGCCCATTTGCTATTACCAATTTATTCAATAC                   <  SRR4302543.5224753/94‑1 (MQ=60)

                                                                           CGAATGCAAAGGTCACTGCCTCACAGAACAACCGTATTATTTATCAAGAAAATGTTCCTCCAGGCCCATTTGCTATTACCAATTTATTCAATAC                   >  SRR4302543.754065/1‑94 (MQ=60)

                                                                           CGAATGCAAAGGTCACTGCCTCACAGAACAACCGTATTATTTATCAAGAAAATGTTCCTCCAGGCCCATTTGCTATTACCAATTTATTCAATAC                   <  SRR4302543.5672748/94‑1 (MQ=60)

                                                                           CGAATGCAAAGGTCACTGCCTCACAGAACAACCGTATTATTTATCAAGAAAATGTTCCTCCAGGCCCATTTGCTATTACCAATTTATTCAATAC                   <  SRR4302543.722320/94‑1 (MQ=60)

                                                                            GAATGCAAAGGTCACTGCCTCACAGAACAACCGTATTATTTATCAAGAAAATGTTCCTCCAGGCCCATTTGCTATTACCAATTTATTCAATACA                  <  SRR4302543.6874961/94‑1 (MQ=60)

                                                                            GAATGCAAAGGTCACTGCCTCACAGAACAACCGTATTATTTATCAAGAAAATGTTCCTCCAGGCCCATTTGCTATTACCAATTTATTCAATACA                  >  SRR4302543.7391820/1‑94 (MQ=60)

                                                                             AATGCAAAGGTCACTGCCTCACAGAACAACCGTATTATTTATCAAGAAAATGTTCCTCCAGGCCCATTTGCTATTACCAATTTATTCAATACAT                 <  SRR4302543.4895992/94‑1 (MQ=60)

                                                                             AATGCAAAGGTCACTGCCTCACAGAACAACCGTATTATTTATCAAGAAAATGTTCCTCCAGGCCCATTTGCTATTACCAATTTATTCAATACAT                 <  SRR4302543.2998940/94‑1 (MQ=60)

                                                                             AATGCAAAGGTCACTGCCTCACAGAACAACCGTATTATTTATCAAGAAAATGTTCCTCCAGGCCCATTTGCTATTACCAATTTATTCAATACAT                 <  SRR4302543.4879005/94‑1 (MQ=60)

                                                                             AATGCAAAGGTCACTGCCTCACAGAACAACCGTATTATTTATCAAGAAAATGTGCCTCCAGGCCCATTTGCTATTACCAATTTATTCAATACAT                 <  SRR4302543.4226906/94‑1 (MQ=60)

                                                                              ATGCAAAGGTCACTGCCTCACAGAACAACCGTATTATTTATCAAGAAAATGTTCCTCCAGGCCCATTTGCTATTACCAATTTATTCAATACATT                <  SRR4302543.6323616/94‑1 (MQ=60)

                                                                               TGCAAAGGTCACTGCCTCACAGAACAACCGTATTATTTATCAAGAAAATGTTCCTCCAGGCCCATTTGCTATTACCAATTTATTCAATACATTA               <  SRR4302543.4269296/94‑1 (MQ=60)

                                                                                GCAAAGGTCACTGCCTCACAGAACAACCGTATTATTTATCAAGAAAATGTTCCTCCAGGCCCATTTGCTATTACCAATTTATTCAATACATTAC              <  SRR4302543.2051367/94‑1 (MQ=60)

                                                                                GCAAAGGTCACTGCCTCACAGAACAACCGTATTATTTATCAAGAAAATGTTCCTCCAGGCCCATTTGCTATTACCAATTTATTCAATACATTAC              <  SRR4302543.2215140/94‑1 (MQ=60)

                                                                                GCAAAGGTCACTGCCTCACAGAACAACCGTATTATTTATCAAGAAAATGTTCCTCCAGGCCCATTTGCTATTACCAATTTATTCAATACATTAC              <  SRR4302543.2541692/94‑1 (MQ=60)

                                                                                 CAAAGGTCACTGCCTCACAGAACAACCGTATTATTTATCAAGAAAATGTTCCTCCAGGCCCATTTGCTATTACCAATTTATTCAATACATTACA             >  SRR4302543.2255494/1‑94 (MQ=60)

                                                                                 CAAAGGTCACTGCCTCACAGAACAACCGTATTATTTATCAAGAAAATGTTCCTCCAGGCCCATTTGCTATTACCAATTTATTCAATACATTACA             >  SRR4302543.5854367/1‑94 (MQ=60)

                                                                                  AAAGGTCACTGCCTCACAGAACAACCGTATTATTTATCAAGAAAATGTTCCTCCAGGCCCATTTGCTATTACCAATTTATTCAATACATTACAG            <  SRR4302543.5960544/94‑1 (MQ=60)

                                                                                   AAGGTCACTGCCTCACAGAACAACCGTATTATTTATCAAGAAAATGTTCCTCCAGGCCCATTTGCTATTACCAATTTATTCAATACATTACAGG           >  SRR4302543.5295256/1‑94 (MQ=60)

                                                                                   AAGGTCACTGCCTCACAGAACAACCGTATTATTTATCAAGAAAATGTTCCTCCAGGCCCATTTGCTATTACCAATTTATTCAATACATTACAGG           >  SRR4302543.3156508/1‑94 (MQ=60)

                                                                                   AAGGTCACTGCCTCACAGAACAACCGTATTATTTATCAAGAAAATGTTCCTCCAGGCCCATTTGCTATTACCAATTTATTCAATACATTACAGG           >  SRR4302543.5638318/1‑94 (MQ=60)

                                                                                   AAGGTCACTGCCTCACAGAACAACCGTATTATTTATCAAGAAAATGTTCCTCCAGGCCCATTTGCTATTACCAATTTATTCAATACATTACAGG           >  SRR4302543.5692828/1‑94 (MQ=60)

                                                                                    AGGTCACTGCCTCACAGAACAACCGTATTATTTATCAAGAAAATGTTCCTCCAGGCCCATTTGCTATTATCAATTTATTCAATACATTACAGGG          >  SRR4302543.5719152/1‑94 (MQ=60)

                                                                                    AGGTCACTGCCTCACAGAACAACCGTATTATTTATCAAGAAAATGTTCCTCCAGGCCCATTTGCTATTACCAATTTATTCAATACATTACAGGG          <  SRR4302543.1199741/94‑1 (MQ=60)

                                                                                    AGGTCACTGCCTCACAGAACAACCGTATTATTTATCAAGAAAATGTTCCTCCAGGCCCATTTGCTATTACCAATTTATTCAATACATTACAGGG          <  SRR4302543.7124144/94‑1 (MQ=60)

                                                                                    AGGTCACTGCCTCACAGAACAACCGTATTATTTATCAAGAAAATGTTCCTCCAGGCCCATTTGCTATTACCAATTTATTCAATACATTACAGGG          <  SRR4302543.5405615/94‑1 (MQ=60)

                                                                                     GGTCACTGCCTCACAGAACAACCGTATTATTTATCAAGAAAATGTTCCTCCAGGCCCATTTGCTATTACCAATTTATTCAATACATTACAGGGG         >  SRR4302543.355491/1‑94 (MQ=60)

                                                                                      GTCACTGCCTCACAGAACAACCGTATTATTTATCAAGAAAATGTTCCTCCAGGCCCATTTGCTATTACCAATTTATTCAATACATTACAGGGGC        <  SRR4302543.379621/94‑1 (MQ=60)

                                                                                        CACTGCCTCACAGAACAACCGTATTATTTATCAAGAAAATGTTCCTCCAGGCCCATTTGCTATTACCAATTTATTCAATACATTACAGGGGCAA      >  SRR4302543.995568/1‑94 (MQ=60)

                                                                                         ACTGCCTCACAGAACAACCGTATTATTTATCAAGAAAATGTTCCTCCAGGCCCATTTGCTATTACCAATTTATTCAATACATTACAGGGGCAAC     >  SRR4302543.7273531/1‑94 (MQ=60)

                                                                                          CTGCCTCACAGAACAACCGTATTATTTATCAAGAAAATGTTCCTCCAGGCCCATTTGCTATTACCAATTTATTCAATACATTACAGGGGCAACT    <  SRR4302543.3780486/94‑1 (MQ=60)

                                                                                          CTGCCTCACAGAACAACCGTATTATTTATCAAGAAAATGTTCCTCCAGGCCCATTTGCTATTACCAATTTATTCAATACATTACAGGGGCAACT    <  SRR4302543.3780487/94‑1 (MQ=60)

                                                                                            GCCTCACAGAACAACCGTATTATTTATCAAGAAAATGTTCCTCCAGGCCCATTTGCTATTACCAATTTATTCAATACATTACAGGGGCAACTTG  <  SRR4302543.1275952/94‑1 (MQ=60)

CGTTGAAAAGCGATGAGAATATGTTACCGCCAGACCTACGTGGTTACGCACCGCAAATCACGGGTGTCGCACAAACGAATGCAAAGGTCACTGTCTCACAGAACAACCGTATTATTTATCAAGAAAATGTTCCTCCAGGCCCATTTGCTATTACCAATTTATTCAATACATTACAGGGGCAACTTG  >  NC_000913/3186173‑3186358

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 0 ≤` `ATCG/ATCG` `< 8 ≤` `ATCG/ATCG` `< 29 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`