Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.

ALE, Flask, Isolate	Predicted Mutations	Mean Coverage	Total Reads	Percent Mapped	Mapped Reads	Average Read Length
A1 F1 I1 R1	1696	279.3	15874187	97.8%	15524954	93.0

Breseq alignment

BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	3,202,607	T→C	C91C (TGT→TGC)	ygiH →	hypothetical protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	3,202,607	0	T	C	99.7%	949.2 / ‑5.5	301	C91C (TGT→TGC)	ygiH	hypothetical protein
Reads supporting (aligned to +/- strand): ref base T (1/0); new base C (155/145); total (156/145)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.84e-01

Only 100 of 314 total aligned reads displayed.

CGACGTTCTGAAAGGAATGTTGCCCGTCTGGGGCGCGTATGAATTAGGTGTCAGCCCCTTCTGGCTAGGCTTAATTGCCATCGCCGCCTGTCTTGGACACATCTGGCCCGTTTTCTTCGGATTTAAAGGAGGAAAAGGCGTTGCTACCGCTTTTGGTGCCATCGCACCCATTGGCTGGGA  >  NC_000913/3202517‑3202696

cGACGTTCTGAAAGGAATGTTGCCCGTCTGGGGCGCGTATGAATTAGGTGTCAGCCCCTTCTGGCTAGGCTTAATTGCCATCGCCgcctgcct                                                                                         <  2:725812/93‑1 (MQ=255)

 gACGTTCTGAAAGGAATGTTGCCCGTCTGGGGCGCGTATGAATTAGGTGTCAGCCCCTTCTGGCTAGGCTTAATTGCCATCGCCGCCTGCCtt                                                                                        >  2:2644234/1‑93 (MQ=255)

 gACGTTCTGAAAGGAATGTTGCCCGTCTGGGGCGCGTATGAATTAGGTGTCAGCCCCTTCTGGCTAGGCTTAATTGCCATCGCCGCCTGCCtt                                                                                        >  1:3081424/1‑93 (MQ=255)

    gTTCTGAAAGGAATGTTGCCCGTCTGGGGCGCGTATGAATTAGGTGTCAGCCCCTTCTGGCTAGGCTTAATTGCCATCGCCGCCTGCCTTGGa                                                                                     <  1:1560295/93‑1 (MQ=255)

    gTTCTGAAAGGAATGTTGCCCGTCTGGGGCGCGTATGAATTAGGTGTCAGCCCCTTCTGGCTAGGCTTAATTGCCATCGCCGCCTGCCTTGGa                                                                                     <  2:5613440/93‑1 (MQ=255)

    gTTCTGAAAGGAATGTTGCCCGTCTGGGGCGCGTATGAATTAGGTGTCAGCCCCTTCTGGCTAGGCTTAATTGCCATCGCCGCCTGCCTTGGa                                                                                     <  1:7024269/93‑1 (MQ=255)

       cTGAAAGGAATGTTGCCCGTCTGGGGCGCGTATGAATTAGGTGTCAGCCCCTTCTGGCTAGGCTTAATTGCCATCGCCGCCTGCCTTGGacac                                                                                  >  2:104550/1‑93 (MQ=255)

       cTGAAAGGAATGTTGCCCGTCTGGGGCGCGTATGAATTAGGTGTCAGCCCCTTCTGGCTAGGCTTAATTGCCATCGCCGCCTGCCTTGGacac                                                                                  <  1:2361393/93‑1 (MQ=255)

        tGAAAGGAATGTTGCCCGTCTGGGGCGCGTATGAATTAGGTGTCAGCCCCTTCTGGCTAGGCTTAATTGCCATCGCCGCCTGCCTTGGAcaca                                                                                 <  1:1158736/93‑1 (MQ=255)

          aaaGGAATGTTGCCCGTCTGGGGCGCGTATGAATTAGGTGTCAGCCCCTTCTGGCTAGGCTTAATTGCCATCGCCGCCTGCCTTGGACACATc                                                                               <  1:6310110/93‑1 (MQ=255)

           aaGGAATGTTGCCCGTCTGGGGCGCGTATGAATTAGGTGTCAGCCCCTTCTGGCTAGGCTTAATTGCCATCGCCGCCTGCCTTGGACACATCt                                                                              <  1:6712364/93‑1 (MQ=255)

           aaGGAATGTTGCCCGTCTGGGGCGCGTATGAATTAGGTGTCAGCCCCTTCTGGCTAGGCTTAATTGCCATCGCCGCCTGCCTTGGACACATCt                                                                              <  2:1781938/93‑1 (MQ=255)

            atgAATGTTGCCCGTCTGGGGCGCGTATGAATTAGGTGTCAGCCCCTTCTGGCTAGGCTTAATTGCCATCGCCGCCTGCCTTGGACACATCTg                                                                             <  2:3308945/91‑1 (MQ=255)

            aGGAATGTTGCCCGTCTGGGGCGCGTATGAATTAGGTGTCAGCCCCTTCTGGCTAGGCTTAATTGCCATCGCCGCCTGCCTTGGACACATCTg                                                                             <  1:2840393/93‑1 (MQ=255)

             ggAATGTTGCCCGTCTGGGGCGCGTATGAATTAGGTGTCAGCCCCTTCTGGCTAGGCTTAATTGCCATCGCCGCCTGCCTTGGACACATCTgg                                                                            >  2:4023014/1‑93 (MQ=255)

             ggAATGTTGCCCGTCTGGGGCGCGTATGAATTAGGTGTCAGCCCCTTCTGGCTAGGCTTAATTGCCATCGCCGCCTGCCTTGGACACATCTgg                                                                            >  2:2258390/1‑93 (MQ=255)

                aTGTTGCCCGTCTGGGGCGCGTATGAATTAGGTGTCAGCCCCTTCTGGCTAGGCTTAATTGCCATCGCCGCCTGCCTTGGACACATCTGGccc                                                                         >  2:3172549/1‑93 (MQ=255)

                       ccGTCTGGGGCGCGTATGAATTAGGTGTCAGCCCCTTCTGGCTAGGCTTAATTGCCATCGCCGCCTGCCTTGGACACATCTGGCCCGTTttct                                                                  >  1:7355584/1‑93 (MQ=255)

                       ccGTCTGGGGCGCGTATGAATTAGGTGTCAGCCCCTTCTGGCTAGGCTTAATTGCCATCGCCGCCTGCCTTGGACACATCTGGCCCGTTttct                                                                  >  1:3626220/1‑93 (MQ=255)

                       ccGTCTGGGGCGCGTATGAATTAGGGGTCAGCCCCTTCTGGCTAGGGTTAATTGCCATCGCCGCCTGCCTTGGACACATCTGGCCCGTTttct                                                                  >  2:7097020/1‑93 (MQ=255)

                        cGTCTGGGGCGCGTATGAATTAGGTGTCAGCCCCTTCTGGCTAGGCTTAATTGCCATCGCCGCCTGCCTTGGACACATCTGGCCCGTTttctt                                                                 >  1:2271406/1‑93 (MQ=255)

                         gTCTGGGGCGCGTATGAATTAGGTGTCAGCCCCTTCTGGCTAGGCTTAATTGCCATCGCCGCCTGCCTTGGACACATCTGGCCCGTTttcttc                                                                <  2:5101152/93‑1 (MQ=255)

                         gTCTGGGGCGCGTATGAATTAGGTGTCAGCCCCTTCTGGCTAGGCTTAATTGCCATCGCCGCCTGCCTTGGACACATCTGGCCCGTTttcttc                                                                <  2:7923231/93‑1 (MQ=255)

                         gTCTGGGGCGCGTATGAATTAGGTGTCAGCCCCTTCTGGCTAGGCTTAATTGCCATCGCCGCCTGCCTTGGACACATCTGGCCCGTTttcttc                                                                >  2:6364452/1‑93 (MQ=255)

                         gTCTGGGGCGCGTATGAACTAGGTGTCAGCCCCTTCTGGCTAGGCTTAATTGCCATCGCCGCCTGCCTTGGACACATCTGGCCCGTTctcttc                                                                >  1:288288/1‑93 (MQ=255)

                          tCTGGGGCGCGTATGAATTAGGTGTCAGCCCCTTCTGGCTAGGCTTAATTGCCATCGCCGCCTGCCTTGGACACATCTGGCCCGTTTTCTTCg                                                               <  1:315886/93‑1 (MQ=255)

                          tCTGGGGCGCGTATGAATTAGGTGTCAGCCCCTTCTGGCTAGGCTTAATTGCCATCGCCGCCTGCCTTGGACACATCTGGCCCGTTTTCTTCg                                                               <  2:7606985/93‑1 (MQ=255)

                          tCTGGGGCGCGTATGAATTAGGTGTCAGCCCCTTCTGGCTAGGCTTAATTGCCATCGCCGCCTGCCTTGGACACATCTGGCCCGTTTTCTTCg                                                               <  1:4918421/93‑1 (MQ=255)

                               ggCGCGTATGAATTAGGTGTCAGCCCCTTCTGGCTAGGCTTAATTGCCATCGCCGCCTGCCTTGGACACATCTGGCCCGTTTTCTTCGGAttt                                                          <  2:5180855/93‑1 (MQ=255)

                               ggCGCGTATGAATTAGGTGTCAGCCCCTTCTGGCTAGGCTTAATTGCCATCGCCGCCTGCCTTGGACACATCTGGCCCGTTTTCTTCGGAttt                                                          <  1:5907206/93‑1 (MQ=255)

                                 cgcgTATGAATTAGGTGTCAGCCCCTTCTGGCTAGGCTTAATTGCCATCGCCGCCTGCCTTGGACACATCTGGCCCGTTTTCTTCGGATTTaa                                                        <  2:355197/93‑1 (MQ=255)

                                  gcgTATGAATTAGGTGTCAGCCCCTTCTGGCTAGGCTTAATTGCCATCGCCGCCTGCCTTGGACACATCTGGCCCGTTTTCTTCGGATTTaaa                                                       >  1:5866855/1‑93 (MQ=255)

                                  gcgTATGAATTAGGTGTCAGCCCCTTCTGGCTAGGCTTAATTGCCATCGCCGCCTGCCTTGGACACATCTGGCCCGTTTTCTTCGGATTTaaa                                                       <  2:5736374/93‑1 (MQ=255)

                                  gcgTATGAATTAGGTGTCAGCCCCTTCTGGCTAGGCTTAATTGCCATCGCCGCCTGCCTTGGACACATCTGGCCCGTTTTCTTCGGATTTaaa                                                       <  2:1264341/93‑1 (MQ=255)

                                  gcgTATGAATTAGGTGTCAGCCCCTTCTGGCTAGGCTTAATTGCCATCGCCGCCTGCCTTGGACACATCTGGCCCGTTTTCTTCGGATTTaaa                                                       >  1:2770483/1‑93 (MQ=255)

                                    gTATGAATTAGGTGTCAGCCCCTTCTGGCTAGGCTTAATTGCCATCGCCGCCTGCCTTGGACACATCTGGCCCGTTTTCTTCGGATTTAAagg                                                     <  2:6926385/93‑1 (MQ=255)

                                    gTATGAATTAGGTGTCAGCCCCTTCTGGCTAGGCTTAATTGCCATCGCCGCCTGCCTTGGACACATCTGGCCCGTTTTCTTCGGATTTAAagg                                                     <  2:6721683/93‑1 (MQ=255)

                                    gTATGAATTAGGTGTCAGCCCCTTCTGGCTAGGCTTAATTGCCATCGCCGCCTGCCTTGGACACATCTGGCCCGTTTTCTTCGGATTTAAagg                                                     <  1:6416300/93‑1 (MQ=255)

                                     tATGAATTAGGTGTCAGCCCCTTCTGGCTAGGCTTAATTGCCATCGCCGCCTGCCTTGGACACATCTGGCCCGTTTTCTTCGGATTTAAagga                                                    <  1:4799366/93‑1 (MQ=255)

                                     tATGAATTAGGTGTCAGCCCCTTCTGGCTAGGCTTAATTGCCATCGCCGCCTGCCTTGGACACATCTGGCCCGTTTTCTTCGGATTTAAagga                                                    <  2:496306/93‑1 (MQ=255)

                                     tATGAATTAGGTGTCAGCCCCTTCTGGCTAGGCTTAATTGCCATCGCCGCCTGCCTTGGACACATCTGGCCCGTTTTCTTCGGATTTAAagga                                                    <  1:3350918/93‑1 (MQ=255)

                                      aTGAATTAGGTGTCAGCCCCTTCTGGCTAGGCTTAATTGCCATCTCCGCCTGCCTTGGACACATCTGGCCCGTTTTCTTCGGATTTAAaggag                                                   <  1:1977007/93‑1 (MQ=255)

                                      aTGAATTAGGTGTCAGCCCCTTCTGGCTAGGCTTAATTGCCATCGCCGCCTGCCTTGGACACATCTGGCCCGTTTTCTTCGGATTTAAaggag                                                   >  1:5460428/1‑93 (MQ=255)

                                      aTGAATTAGGTGTCAGCCCCTTCTGGCTAGGCTTAATTGCCATCGCCGCCTGCCTTGGACACATCTGGCCCGTTTTCTTCGGATTTAAaggag                                                   <  2:5490831/93‑1 (MQ=255)

                                      aTGAATTAGGTGTCAGCCCCTTCTGGCTAGGCTTAATTGCCATCGCCGCCTGCCTTGGACACATCTGGCCCGTTTTCTTCGGATTTAAaggag                                                   <  2:5050958/93‑1 (MQ=255)

                                        gAATTAGGTGTCAGCCCCTTCTGGCTAGGCTTAATTGCCATCGCCGCCTGCCTTGGACACATCTGGCCCGTTTTCTTCGGATTTAAAggagga                                                 >  1:183517/1‑93 (MQ=255)

                                         aaTTAGGTGTCAGCCCCTTCTGGCTAGGCTTAATTGCCATCGCCGCCTGCCTTGGACACATCTGGCCCGTTTTCTTCGGATTTAAAGGAGGaa                                                <  1:7684225/93‑1 (MQ=255)

                                          aTTAGGTGTCAGCCCCTTCTGGCTAGGCTTAATTGCCATCGCCGCCTGCCTTGGACACATCTGGCCCGTCTTCTTCGGATTTAAAGGAGGaaa                                               >  1:2408371/1‑93 (MQ=255)

                                           ttAGGTGTCAGCCCCTTCTGGCTAGGCTTAATTGCCATCGCCGCCTGCCTTGGACACATCTGGCCCGTTTTCTTCGGATTTAAAGGAGGaaaa                                              <  1:7192163/93‑1 (MQ=255)

                                           ttAGGTGTCAGCCCCTTCTGGCTAGGCTTAATTGCCATCGCCGCCTGCCTTGGACACATCTGGCCCGTTTTCTTCGGATTTAAAGGAGGaaaa                                              <  2:2097535/93‑1 (MQ=255)

                                           ttAGGTGTCAGCCCCTTCTGGCTAGGCTTAATTGCCATCGCCGCCTGCCTTGGACACATCTGGCCCGTTTTCTTCGGATTTAAAGGAGGaaaa                                              <  1:6098923/93‑1 (MQ=255)

                                            tAGGTGTCAGCCCCTTCTGGCTAGGCTTAATTGCCATCGCCGCCTGCCTTGGACACATCTGGCCCGTTTTCTTCGGATTTAAAGGAGGAAAAg                                             <  1:1042600/93‑1 (MQ=255)

                                              ggTGTCAGCCCCTTCTGGCTAGGCTTAATTGCCATCGCCGCCTGCCTTGGACACATCTGGCCCGTTTTCTTCGGATTTAAAGGAGGAAAAGGc                                           >  1:2679413/1‑93 (MQ=255)

                                              ggTGTCAGCCCCTTCTGGCTAGGCTTAATTGCCATCGCCGCCTGCCTTGGACACATCTGGCCCGTTTTCTTCGGATTTAAAGGAGGAAAAGGc                                           <  1:3464040/93‑1 (MQ=255)

                                              ggTGTCAGCCCCTTCTGGCTAGGCTTAATTGCCATCGCCGCCTGCCTTGGACACATCTGGCCCGTTTTCTTCGGATTTAAAGGAGGAAAAGGc                                           <  1:6831714/93‑1 (MQ=255)

                                                tgtCAGCCCCTTCTGGCTAGGCTTAATTGCCATCGCCGCCTGCCTTGGACACATCTGGCCCGTTTTCTTCGGATTTAAAGGAGGAAAAGGCGt                                         <  2:5442760/93‑1 (MQ=255)

                                                  tCAGCCCCTTCTGGCTAGGCTTAATTGCCATCGCCGCCTGCCTTGGACACATCTGGCCCGTTTTCTTCGGATTTAAAGGAGGAAAAGGCGTTg                                       >  2:6604000/1‑93 (MQ=255)

                                                   cAGCCCCTTCTGGCTAGGCTTAATTGCCATCGCCGCCTGCCTTGGACACATCTGGCCCGTTTTCTTCGGATTTAAAGGAGGAAAAGGCGTTGc                                      <  1:220363/93‑1 (MQ=255)

                                                     gCCCCTTCTGGCTAGGCTTAATTGCCATCGCCGCCTGCCTTGGACACATCTGGCCCGTTTTCTTCGGATTTAAAGGAGGAAAAGGCGTTGCTa                                    <  2:5343175/93‑1 (MQ=255)

                                                     gCCCCTTCTGGCTAGGCTTAATTGCCATCGCCGCCTGCCTTGGACACATCTGGCCCGTTTTCTTCGGATTTAAAGGAGGAAAAGGCGTTGCTa                                    >  2:2831499/1‑93 (MQ=255)

                                                       cccTTCTGGCTAGGCTTAATTGCCATCGCCGCCTGCCTTGGACACATCTGGCCCGTTTTCTTCGGATTTAAAGGAGGAAAAGGCGTTGCTAcc                                  >  2:1940034/1‑93 (MQ=255)

                                                        ccTTCTGGCTAGGCTTAATTGCCATCGCCGCCTGCCTTGGACACATCTGGCCCGTTTTCTTCGGATTTAAAGGAGGAAAAGGCGTTGCTACCg                                 >  2:1406336/1‑93 (MQ=255)

                                                        ccTTCTGGCTAGGCTTAATTGCCATCGCCGCCTGCCTTGGACACATCTGGCCCGTTTTCTTCGGATTTAAAGGAGGAAAAGGCGTTGCTACCg                                 >  1:3797607/1‑93 (MQ=255)

                                                        ccTTCTGGCTAGGCTTAATTGCCATCGCCGCCTGCCTTGGACACATCTGGCCCGTTTTCTTCGGATTTAAAGGAGGAAAAGGCGTTGCTACCg                                 >  1:4519164/1‑93 (MQ=255)

                                                         cTTCTGGCTAGGCTTAATTGCCATCGCCGCCTGCCTTGGACACATCTGGCCCGTTTTCTTCGGATTTAAAGGAGGAAAAGGCGTTGCTACCGc                                >  1:5831399/1‑93 (MQ=255)

                                                          ttCTGGCTAGGCTTAATTGCCATCGCCGCCTGCCTTGGACACATCTGGCCCGTTTTCTTCGGATTTAAAGGAGGAAAAGGCGTTGCTACCGCt                               >  1:3321628/1‑93 (MQ=255)

                                                          ttCTGGCTAGGCTTAATTGCCATCGCCGCCTGCCTTGGACACATCTGGCCCGTTTTCTTCGGATTTAAAGGAGGAAAAGGCGTTGCTACCGCt                               >  2:3484291/1‑93 (MQ=255)

                                                          ttCTGGCTAGGCTTAATTGCCATCGCCGCCTGCCTTCGACACATCTTGCCCGTTTTCTTCGGATTTAAAGGATGAATAGGCGTTGCTACCGCt                               >  2:7483287/1‑93 (MQ=255)

                                                            ttGGCTAGGCTTAATTGCCATCGCCGCCTGCCTTGGACACATCTGGCCCGTTTTCTTCGGATTTAAAGGAGGAAAAGGCGTTGCTACCGCttt                             <  1:4285739/92‑1 (MQ=255)

                                                            cTGGCTAGGCTTAATTGCCATCGCCGCCTGCCTTGGACACATCTGGCCCGTTTTCTTCGGATTTAAAGGAGGAAAAGGCGTTGCTACCGCttt                             <  1:4835765/93‑1 (MQ=255)

                                                             tGGCTAGGCTTATTTGCCATCGCCGCCTGCCTTGGACACATCTGGCCCGTTTTCTTCGGATTTAAAGGAGGAAAAGGCGTTGCTACCGCtttt                            <  2:7027469/93‑1 (MQ=255)

                                                             tGGCTAGGCTTAATTGCCATCGCCGCCTGCCTTGGACACATCTGGCCCGTTTTCTTCGGATTTAAAGGAGGAAAAGGCGTTGCTACCGCtttt                            >  1:7829774/1‑93 (MQ=255)

                                                             tGGCTAGGCTTAATTGCCATCGCCGCCTGCCTTGGACACATCTGGCCCGTTTTCTTCGGATTTAAAGGAGGAAAAGGCGTTGCTACCGCtttt                            <  2:3756859/93‑1 (MQ=255)

                                                             tGGCTAGGCTTAATTGCCATCGCCGCCTGCCTTGGACACATCTGGCCCGTTTTCTTCGGATTTAAAGGAGGAAAAGGCGTTGCTACCGCtttt                            >  1:6123259/1‑93 (MQ=255)

                                                             tGGCTAGGCTTAATTGCCATCGCCGCCTGCCTTGGACACATCTGGCCCGTTTTCTTCGGATTTAAAGGAGGAAAAGGCGTTGCTACCGCtttt                            >  2:6232237/1‑93 (MQ=255)

                                                              ggCTAGGCTTAATTGCCATCGCCGCCTGCCTTGGACACATCTGGCCCGTTTTCTTCGGATTTAAAGGAGGAAAAGGCGTTGCTACCGCTTTTg                           <  1:4586919/93‑1 (MQ=255)

                                                              ggCTAGGCTTAATTGCCATCGCCGCCTGCCTTGGACACATCTGGCCCGTTTTCTTCGGATTTAAAGGAGGAAAAGGCGTTGCTACCGCTTTTg                           <  2:468895/93‑1 (MQ=255)

                                                               gCTAGGCTTAATTGCCATCGCCGCCTGCCTTGGACACATCTGGCCCGTTTTCTTCGGATTTAAAGGAGGAAAAGGCGTTGCTACCGCTTTTgg                          <  1:5114726/93‑1 (MQ=255)

                                                               gCTAGGCTTAATTGCCATCGCCGCCTGCCTTGGACACATCTGGCCCGTTTTCTTCGGATTTAAAGGAGGAAAAGGCGTTGCTACCGCTTTTgg                          >  2:2762504/1‑93 (MQ=255)

                                                               gCTAGGCTTAATTGCCATCGCCGCCTGCCTTGGACACATCTGGCCCGTTTTCTTCGGATTTAAAGGAGGAAAAGGCGTTGCTACCGCTTTTgg                          >  1:4101769/1‑93 (MQ=255)

                                                               gCTAGGCTTAATTGCCATCGCCGCCTGCCTTGGACACATCTGGCCCGTTTTCTTCGGATTTAAAGGAGGAAAAGGCGTTGCTACCGCTTTTgg                          >  1:5277736/1‑93 (MQ=255)

                                                                  aGGCTTAATTGCCATCGCCGCCTGCCTTGGACACATCTGGCCCGTTTTCTTCGGATTTAAAGGAGGCAAAGGCGTTGCTACCGCTTTTGGTGc                       >  2:846114/1‑93 (MQ=255)

                                                                  aGGCTTAATTGCCATCGCCGCCTGCCTTGGACACATCTGGCCCGTTTTCTTCGGATTTAAAGGAGGAAAAGGCGTTGCTACCGCTTTTGGTGc                       >  1:4715494/1‑93 (MQ=255)

                                                                  aGGCTTAATTGCCATCGCCGCCTGCCTTGGACACATCTGGCCCGTTTTCTTCGGATTTAAAGGAGGAAAAGGCGTTGCTACCGCTTTTGGTGc                       <  1:7631392/93‑1 (MQ=255)

                                                                    gCTTAATTGCCATCGCCGCCTGCCTTGGACACATCTGGCCCGTTTTCTTCGGATTTAAAGGAGGAAAAGGCGTTGCTACCGCTTTTGGTGCCa                     >  1:2292917/1‑93 (MQ=255)

                                                                    gCTTAATTGCCATCGCCGCCTGCCTTGGACACATCTGGCCCGTTTTCTTCGGATTTAAAGGAGGAAAAGGCGTTGCTACCGCTTTTGGTGCCa                     >  1:6495820/1‑93 (MQ=255)

                                                                    gCTTAATTGCCATCGCCGCCTGCCTTGGACACATCTGGCCCGTTTTCTTCGGATTTAAAGGAGGAAAAGGCGTTGCTACCGCTTTTGGTGCCa                     <  2:1860055/93‑1 (MQ=255)

                                                                      ttAATTGCCATCGCCGCCTGCCTTGGACACATCCGGCCCGTTTTCTTCGGATTTAAAGGAGGAAAAAGCGTTGCTACCGCTTTTGGTGCCATc                   >  1:5583682/1‑93 (MQ=255)

                                                                       tAATTGCCATCGCCGCCTGCCTTGGACACATCTGGCCCGTTTTCTTCGGATTTAAAGGAGGAAAAGGCGTTGCTACCGCTTTTGGTGCCATCg                  >  1:2171543/1‑93 (MQ=255)

                                                                        aaTTGCCATCGCCGCCTGCCTTGGACACATCTGGCCCGTTTTCTTCGGATTTAAAGGAGGAAAAGGCGTTGCTACCGCTTTTTGTGCCATCGc                 >  2:3957834/1‑93 (MQ=255)

                                                                            gCCATCGCCGCCTGCCTTGGACACATCTGGCCCGTTTTCTTCGGATTTAAAGAAGGAAAAGGCGTTGCTACCGCTTTTGGTGCATTCGCcccc             >  2:2430865/1‑93 (MQ=255)

                                                                              cATCGCCGCCTGCCTTGGACACATCTGGCCCGTTTTCTTCGGATTTAAAGGAGGAAAAGGCGTTGCTACCGCTTTTGGTGCCATCGCACCCAt           >  1:6923563/1‑93 (MQ=255)

                                                                              cATCGCCGCCTGCCTTGGACACATCTGGCCCGTTTTCTTCGGATTTAAAGGAGGAAAAGGCGTTGCTACCGCTTTTGGTGCCATCGCACCCAt           <  1:4469204/93‑1 (MQ=255)

                                                                              cATCGCCGCCTGCCTTGGACACATCTGGCCCGTTTTCTTCGGATTTAAAGGAGGAAAAGGCGTTGCTACCGCTTTTGGTGCCATCGCACCCAt           >  2:4857461/1‑93 (MQ=255)

                                                                               aTCGCCGCCTGCCTTGGACACATCTGGCCCGTTTTCTTCGGATTTAAAGGAGGAAAAGGCGTTGCTACCGCTTTTGGTGCCATCGCACCCAtt          >  2:3275315/1‑93 (MQ=255)

                                                                                tCGCCGCCTGCCTTGGACACATCTGGCCCGTTTTCTTCGGATTTAAAGGAGGAAAAGGCGTTGCTACCGCTTTTGGTGCCATCGCACCCATTg         >  1:5036039/1‑93 (MQ=255)

                                                                                  gccgccTGCCTTGGACACATCTGGCCCGTTTTCTTCGGATTTAAAGGAGGAAAAGGCGTTGCTACCGCTTTTGGTGCCATCGCACCCATTGGc       >  2:145222/1‑93 (MQ=255)

                                                                                   ccgccTGCCTTGGACACATCTGGCCCGTTTTCTTCGGATTTAAAGGAGGAAAAGGCGTTGCTACCGCTTTTGGTGCCATCGCACCCATTGGCt      >  2:6470422/1‑93 (MQ=255)

                                                                                   ccgccTGCCTTGGACACATCTGGCCCGTTTTCTTCGGATTTAAAGGAGGAAAAGGCGTTGCTACCGCTTTTGGTGCCATCGCACCCATTGGCt      <  2:6137464/93‑1 (MQ=255)

                                                                                    cgccTGCCTTGGACACATCTGGCCCGTTTTCTTCGGATTTAAAGGAGGAAAAGGCGTTGCTACCGCTTTTGGTGCCATCGCACCCATTGGCTg     <  1:976212/93‑1 (MQ=255)

CGACGTTCTGAAAGGAATGTTGCCCGTCTGGGGCGCGTATGAATTAGGTGTCAGCCCCTTCTGGCTAGGCTTAATTGCCATCGCCGCCTGTCTTGGACACATCTGGCCCGTTTTCTTCGGATTTAAAGGAGGAAAAGGCGTTGCTACCGCTTTTGGTGCCATCGCACCCATTGGCTGGGA  >  NC_000913/3202517‑3202696

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 20 ≤` `ATCG/ATCG` `< 29 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`

GATK/CNVnator alignment

BRESEQ :: bam2aln output

TTCGACGTTCTGAAAGGAATGTTGCCCGTCTGGGGCGCGTATGAATTAGGTGTCAGCCCCTTCTGGCTAGGCTTAATTGCCATCGCCGCCTGTCTTGGACACATCTGGCCCGTTTTCTTCGGATTTAAAGGAGGAAAAGGCGTTGCTACCGCTTTTGGTGCCATCGCACCCATTGGCTGGGATCTC  >  NC_000913/3202515‑3202700

TTCGACGTTCTGAAAGGAATGTTGCCCGTCTGGGGCGCGTATGAATTAGGTGTCAGCCCCTTCTGGCTAGGCTTAATTGCCATCGCCGCCTGCC                                                                                              >  SRR4302543.6557893/1‑94 (MQ=60)

 TCGACGTTCTGAAAGGAATGTTGCCCGTCTGGGGCGCGTATGAATTAGGTGTCAGCCCCTTCTGGCTAGTCTTAATTGCCATCGCCGCCTGCCT                                                                                             <  SRR4302543.3036238/94‑1 (MQ=60)

  CGACGTTCTGAAAGGAATGTTGCCCGTCTGGGGCGCGTATGAATTAGGTGTCAGCCCCTTCTGGCTAGGCTTAATTGCCATCGCCGCCTGCCTT                                                                                            >  SRR4302543.3109130/1‑94 (MQ=60)

  CGACGTTCTGAAAGGAATGTTGCCCGTCTGGGGCGCGTATGAATTAGGTGTCAGCCCCTTCTGGCTAGGCTTAATTGCCATCGCCGCCTGCCTT                                                                                            >  SRR4302543.3500601/1‑94 (MQ=60)

   GACGTTCTGAAAGGAATGTTGCCCGTCTGGGGCGCGTATGAATTAGGTGTCAGCCCCTTCTGGCTAGGCTTAATTGCCATCGCCGCCTGCCTTG                                                                                           >  SRR4302543.1428307/1‑94 (MQ=60)

     CGTTCTGAAAGGAATGTTGCCCGTCTGGGGCGCGTATGAATTAGGTGTCAGCCCCTTCTGGCTAGGCTTAATTGCCATCGCCGCCTGCCTTGGA                                                                                         <  SRR4302543.5192692/94‑1 (MQ=60)

      GTTCTGAAAGGAATGTTGCCCGTCTGGGGCGCGTATGAATTAGGTGTCAGCCCCTTCTGGCTAGGCTTAATTGCCATCGCCGCCTGCCTTGGAC                                                                                        <  SRR4302543.1574229/94‑1 (MQ=60)

      GTTCTGAAAGGAATGTTGCCCGTCTGGGGCGCGTATGAATTAGGTGTCAGCCCCTTCTGGCTAGGCTTAATTGCCATCGCCGCCTGCCTTGGAC                                                                                        <  SRR4302543.7091618/94‑1 (MQ=60)

       TTCTGAAAGGAATGTTGCCCGTCTGGGGCGCGTATGAATTAGGTGTCAGCCCCTTCTGGCTAGGCTTAATTGCCATCGCCGCCTGCCTTGGACA                                                                                       <  SRR4302543.428333/94‑1 (MQ=60)

        TCTGAAAGGAATGTTGCCCGTCTGGGGCGCGTATGAATTAGGTGTCAGCCCCTTCTGGCTAGGCTTAATTGCCATCGCCGCCTGCCTTGGACAC                                                                                      <  SRR4302543.6197428/94‑1 (MQ=60)

         CTGAAAGGAATGTTGCCCGTCTGGGGCGCGTATGAATTAGGTGTCAGCCCCTTCTGGCTAGGCTTAATTGCCATCGCCGCCTGCCTTGGACACA                                                                                     <  SRR4302543.2382809/94‑1 (MQ=60)

          TGAAAGGAATGTTGCCCGTCTGGGGCGCGTATGAATTAGGTGTCAGCCCCTTCTGGCTAGGCTTAATTGCCATCGCCGCCTGCCTTGGACACAT                                                                                    <  SRR4302543.5062297/94‑1 (MQ=60)

          TGAAAGGAATGTTGCCCGTCTGGGGCGCGTATGAATTAGGTGTCAGCCCCTTCTGGCTAGGCTTAATTGCCATCGCCGCCTGCCTTGGACACAT                                                                                    <  SRR4302543.1169289/94‑1 (MQ=60)

          TGAAAGGAATGTTGCCCGTCTGGGGCGCGTATGAATTAGGTGTCAGCCCCTTCTGGCTAGGCTTAATTGCCATCGCCGCCTGCCTTGGACACAT                                                                                    <  SRR4302543.643015/94‑1 (MQ=60)

            AAAGGAATGTTGCCCGTCTGGGGCGCGTATGAATTAGGTGTCAGCCCCTTCTGGCTAGGCTTAATTGCCATCGCCGCCTGCCTTGGACACATCT                                                                                  <  SRR4302543.3344462/94‑1 (MQ=60)

            AAAGGAATGTTGCCCGTCTGGGGCGCGTATGAATTAGGTGTCAGCCCCTTCTGGCTAGGCTTAATTGCCATCGCCGCCTGCCTTGGACACATCT                                                                                  <  SRR4302543.6369455/94‑1 (MQ=60)

             AAGGAATGTTGCCCGTCTGGGGCGCGTATGAATTAGGTGTCAGCCCCTTCTGGCTAGGCTTAATTGCCATCGCCGCCTGCCTTGGACACATCTG                                                                                 <  SRR4302543.5931357/94‑1 (MQ=60)

             AAGGAATGTTGCCCGTCTGGGGCGCGTATGAATTAGGTGTCAGCCCCTTCTGGCTAGGCTTAATTGCCATCGCCGCCTGCCTTGGACACATCTG                                                                                 <  SRR4302543.2703481/94‑1 (MQ=60)

             AAGGAATGTTGCCCGTCTGGGGCGCGTATGAATTAGGTGTCAGCCCCTTCTGGCTAGGCTTAATTGCCATCGCCGCCTGCCTTGGACACATCTG                                                                                 <  SRR4302543.3066549/94‑1 (MQ=60)

             AAGGAATGTTGCCCGTCTGGGGCGCGTATGAATTAGGTGTCAGCCCCTTCTGGCTAGGCTTAATTGCCATCGCCGCCTGCCTTGGACACATCTG                                                                                 <  SRR4302543.6775780/94‑1 (MQ=60)

             AAGGAATGTTGCCCGTCTGGGGCGCGTATGAATTAGGTGTCAGCCCCTTCTGGCTAGGCTTAATTGCCATCGCCGCCTGCCTTGGACACATCTG                                                                                 <  SRR4302543.6501314/94‑1 (MQ=60)

             AAGGAATGTTGCCCGTCTGGGGCGCGTATGAATTAGGTGTCAGCCCCTTCTGGCTAGGCTTAATTGCCATCGCCGCCTGCCTTGGACACATCTG                                                                                 <  SRR4302543.2019278/94‑1 (MQ=60)

             AAGGAATGTTGCCCGTCTGGGGCGCGTATGAATTAGGTGTCAGCCCCTTCTGGCTAGGCTTAATTGCAATCGCCGCCTGCCTTGGACACATCTG                                                                                 >  SRR4302543.5525298/1‑94 (MQ=60)

              AGGAATGTTGCCCGTCTGGGGCGCGTATGAATTAGGTGTCAGCCCCTTCTGGCTAGGCTTAATTGCCATCGCCGCCTGCCTTGGACACATCTGG                                                                                <  SRR4302543.4428902/94‑1 (MQ=60)

              AGGAATGTTGCCCGTCTGGGGCGCGTATGAATTAGGTGTCAGCCCCTTCTGGCTAGGCTTAATTGCCATCGCCGCCTGCCTTGGACACATCTGG                                                                                <  SRR4302543.2715106/94‑1 (MQ=60)

              AGGAATGTTGCCCGTCTGGGGCGCGTATGAATTAGGTGTCAGCCCCTTCTGGCTAGGCTTAATTGCCATCGCCGCCTGCCTTGGACACATCTGG                                                                                <  SRR4302543.2866354/94‑1 (MQ=60)

               GGAATGTTGCCCGTCTGGGGCGCGTATGAATTAGGTGTCAGCCCCTTCTGGCTAGGCTTAATTGCCATCGCCGCCTGTCTTGGACACATCTGGC                                                                               >  SRR4302543.6964288/1‑94 (MQ=60)

                GAATGTTGCCCGTCTGGGGCGCGTATGAATTAAGTGTCAGCCCCTTCTGGCTAGGCTTAATTGCCATCGCCGCCTGCCTTGGACACATCTGGCC                                                                              >  SRR4302543.3538946/1‑94 (MQ=60)

                 AATGTTGCCCGTCTGGGGCGCGTATGAATTAGGTGTCAGCCCCTTCTGGCTAGGCTTAATTGCCATCGCCGCCTGCCTTGGACACATCTGGCCC                                                                             >  SRR4302543.6799751/1‑94 (MQ=60)

                 AATGTTGCCCGTCTGGGGCGCGTATGAATTAGGTGTCAGCCCCTTCTGGCTAGGCTTAATTGCCATCGCCGCCTGCCTTGGACACATCTGGCCC                                                                             <  SRR4302543.7363524/94‑1 (MQ=60)

                 AATGTTGCCCGTCTGGGGCGCGTATGAATTAGGTGTCAGCCCCTTCTGGCTAGGCTTAATTGCCATCGCCGCCTGCCTTGGACACATCTGGCCC                                                                             >  SRR4302543.4603017/1‑94 (MQ=60)

                 AATGTTGCCCGTCTGGGGCGCGTATGAATTAGGTGTCAGCCCCTTCTGGCTAGGCTTAATTGCCATCGCCGCCTGCCTTGGACACATCTGGCCC                                                                             <  SRR4302543.7283823/94‑1 (MQ=60)

                 AATGTTGCCCGTCTGGGGCGCGTATGAATTAGGTGTCAGCCCCTTCTGGCTAGGCTTAATTGCCATCGCCGCCTGCCTTGGACACATCTGGCCC                                                                             >  SRR4302543.4603016/1‑94 (MQ=60)

                 AATGTTGCCCGTCTGGGGCGCGTATGAATTAGGTGTCAGCCCCTTCTGGCTAGGCTTAATTGCCATCGCCGCCTGCCTTGGACACATCTGGCCC                                                                             <  SRR4302543.4781031/94‑1 (MQ=60)

                  ATGTTGCCCGTCTGGGGCGCGTATGAATTAGGTGTCAGCCCCTTCTGGCTAGGCTTAATTGCCATCGCCGCCTGCCTTGGACACATCTGGCCCG                                                                            >  SRR4302543.5100287/1‑94 (MQ=60)

                  ATGTTGCCCGTCTGGGGCGCGTATGAATTAGGTGTCAGCCCCTTCTGGCTAGGCTTAATTGCCATCGCCGCCTGCCTTGGACACATCTGGCCCG                                                                            >  SRR4302543.2313046/1‑94 (MQ=60)

                   TGTTGCCCGTCTGGGGCGCGTATGAATTAGGTGTCAGCCCCTTCTGGCTAGGCTTAATTGCCATCGCCGCCTGCCTTGGACACATCTGGCCCGT                                                                           >  SRR4302543.4185185/1‑94 (MQ=60)

                   TGTTGCCCGTCTGGGGCGCGTATGAATTAGGTGTCAGCCCCTTCTGGCTAGGCTTAATTGCCATCGCCGCCTGCCTTGGACACATCTGGCCCGT                                                                           >  SRR4302543.5898462/1‑94 (MQ=60)

                    GTTGCCCGTCTGGGGCGCGTATGAATTAGGTGTCAGCCCCTTCTGGCTAGGCTTAATTGCCATCGCCGCCTGCCTTGGACACATCTGGCCCGTT                                                                          <  SRR4302543.4544577/94‑1 (MQ=60)

                      TGCCCGTCTGGGGCGCGTATGAATTAGGTGTCAGCCCCTTCTGGCTAGGCTTAATTGCCATCGCCGCCTGCCTTGGACACATCTGGCCCGTTTT                                                                        <  SRR4302543.3025716/94‑1 (MQ=60)

                       GCCCGTCTGGGGCGCGTATGAATTAGGTGTCAGCCCCTTCTGGCTAGGCTTAATTGCCATCGCCGCCTGCCTTGGACACATCTGGCCCGTTTTC                                                                       <  SRR4302543.2311822/94‑1 (MQ=60)

                       GCCCGTCTGGGGCGCGTATGAATTAGGTGTCAGCCCCTTCTGGCTAGGCTTAATTGCCATCGCCGCCTGCCTTGGACACATCTGGCCCGTTTTC                                                                       <  SRR4302543.7968738/94‑1 (MQ=60)

                        CCCGTCTGGGGCGCGTATGAATTAGGTGTCAGCCCCTTCTGGCTAGGCTTAATTGCCATCGCCGCCTGCCTTGGACACATCTGGCCCGTTTTCT                                                                      >  SRR4302543.7426338/1‑94 (MQ=60)

                        CCCGTCTGGGGCGCGTATGAATTAGGTGTCAGCCCCTTCTGGCTAGGCTTAATTGCCATCGCCGCCTGCCTTGGACACATCTGGCCCGTTTTCT                                                                      >  SRR4302543.3658158/1‑94 (MQ=60)

                        CCCGTCTGGGGCGCGTATGAATTAGGTGTCAGCCCCTTCTGGCTAGGCTTAATTGCCATCGCCGCCTGCCTTGGACACATCTGGCCCGTTTTCT                                                                      >  SRR4302543.2132976/1‑94 (MQ=60)

                         CCGTCTGGGGCGCGTATGAATTAGGTGTCAGCCCCTTCTGGCTAGGCTTAATTGCCATCGCCGCCTGCCTTGGCCACATCTGGCCCGTTTTCTT                                                                     >  SRR4302543.2292165/1‑94 (MQ=60)

                         CCGTCTGGGGCGCGTATGAATTAGGTGTCAGCCCCTTCTGGCTAGGCTTAATTGCCATCGCCGCCTGCCTTGGACACATCTGGCCCGTTTTCTT                                                                     >  SRR4302543.2292163/1‑94 (MQ=60)

                          CGTCTGGGGCGCGTATGAATTAGGTGTCAGCCCCTTCTGGCTAGGCTTAATTGCCATCGCCGCCTGCCTTGGACACATCTGGCCCGTTTTCTTC                                                                    <  SRR4302543.3381964/94‑1 (MQ=60)

                          CGTCTGGGGCGCGTATGAATTAGGTGTCAGCCCCTTCTGGCTAGGCTTAATTGCCATCGCCGCCTGCCTTGGACACATCTGGCCCGTTTTCTTC                                                                    <  SRR4302543.4846454/94‑1 (MQ=60)

                          CGTCTGGGGCGCGTATGAATTAGGTGTCAGCCCCTTCTGGCTAGGCTTAATTGCCATCGCCGCCTGCCTTGGACACATCTGGCCCGTTTTCTTC                                                                    >  SRR4302543.290857/1‑94 (MQ=60)

                          CGTCTGGGGCGCGTATGAACTAGGTGTCAGCCCCTTCTGGCTAGGCTTAATTGCCATCGCCGCCTGCCTTGGACACATCTGGCCCGTTCTCTTC                                                                    >  SRR4302543.290858/1‑94 (MQ=60)

                           GTCTGGGGCGCGTATGAATTAGGTGTCAGCCCCTTCTGGCTAGGCTTAATTGCCATCGCCGCCTGCCTTGGACACATCTGGCCCGTTTTCTTCG                                                                   <  SRR4302543.3832982/94‑1 (MQ=60)

                           GTCTGGGGCGCGTATGAATTAGGTGTCAGCCCCTTCTGGCTAGGCTTAATTGCCATCGCCGCCTGCCTTGGACACATCTGGCCCGTTTTCTTCG                                                                   >  SRR4302543.7745105/1‑94 (MQ=60)

                            TCTGGGGCGCGTATGAATTAGGTGTCAGCCCCTTCTGGCTAGGCTTAATTGCCATCGCCGCCTGCCTTGGACACATCTGGCCCGTTTTCTTCGG                                                                  <  SRR4302543.318740/94‑1 (MQ=60)

                            TCTGGGGCGCGTATGAATTAGGTGTCAGCCCCTTCTGGCTAGGCTTAATTGCCATCGCCGCCTGCCTTGGACACATCTGGCCCGTTTTCTTCGG                                                                  <  SRR4302543.4963233/94‑1 (MQ=60)

                              TGGGGCGCGTATGAATTAGGTGTCAGCCCCTTCTGGCTAGGCTTAATTGCCATCGCCGCCTGCCTTGGACACATCTGGCCCGTTTTCTTCGGAT                                                                >  SRR4302543.5217338/1‑94 (MQ=60)

                              TGGGGCGCGTATGAATTAGGTGTCAGCCCCTTCTGGCTAGGCTTAATTGCCATCGCCGCCTGCCTTGGACACATCTGGCCCGTTTTCTTCGGAT                                                                <  SRR4302543.5025268/94‑1 (MQ=60)

                                 GGCGCGTATGAATTAGGTGTCAGCCCCTTCTGGCTAGGCTTAATTGCCATCGCCGCCTGCCTTGGACACATCTGGCCCGTTTTCTTCGGATTTA                                                             <  SRR4302543.5961123/94‑1 (MQ=60)

                                   CGCGTATGAATTAGGTGTCAGCCCCTTCTGGCTAGGCTTAATTGCCATCGCCGCCTGCCTTGGACACATCTGGCCCGTTTTCTTCGGATTTAAA                                                           >  SRR4302543.2795698/1‑94 (MQ=60)

                                   CGCGTATGAATTAGGTGTCAGCCCCTTCTGGCTAGGCTTAATTGCCATCGCCGCCTGCCTTGGACACATCTGGCCCGTTTTCTTCGGATTTAAA                                                           >  SRR4302543.5920259/1‑94 (MQ=60)

                                    GCGTATGAATTAGGTGTCAGCCCCTTCTGGCTAGGCTTAATTGCCATCGCCGCCTGCCTTGGACACATCTGGCCCGTTTTCTTCGGATTTAAAG                                                          <  SRR4302543.442312/94‑1 (MQ=60)

                                     CGTATGAATTAGGTGTCAGCCCCTTCTGGCTAGGCTTAATTGCCATCGCCGCCTGCCTTGGACACATCTGGCCCGTTTTCTTCGGATTTAAAGG                                                         <  SRR4302543.177924/94‑1 (MQ=60)

                                     CGTATGAATTAGGTGTCAGCCCCTTCTGGCTAGGCTTAATTGCCATCGCCGCCTGCCTTGGACACATCTGGCCCGTTTTCTTCGGATTTAAAGG                                                         >  SRR4302543.7193208/1‑94 (MQ=60)

                                      GTATGAATTAGGTGTCAGCCCCTTCTGGCTAGGCTTAATTGCCATCGCCGCCTGCCTTGGACACATCTGGCCCGTTTTCTTCGGATTTAAAGGA                                                        <  SRR4302543.6476744/94‑1 (MQ=60)

                                      GTATGAATTAGGTGTCAGCCCCTTCTGGCTAGGCTTAATTGCCATCGCCGCCTGCCTTGGACACATCTGGCCCGTTTTCTTCGGATTTAAAGGA                                                        >  SRR4302543.6023841/1‑94 (MQ=60)

                                       TATGAATTAGGTGTCAGCCCCTTCTGGCTAGGCTTAATTGCCATCGCCGCCTGCCTTGGACACATCTGGCCCGTTTTCTTCGGATTTAAAGGAG                                                       <  SRR4302543.5926891/94‑1 (MQ=60)

                                       TATGAATTAGGTGTCAGCCCCTTCTGGCTAGGCTTAATTGCCATCGCCGCCTGCCTTGGACACATCTGGCCCGTTTTCTTCGGATTTAAAGGAG                                                       <  SRR4302543.2218626/94‑1 (MQ=60)

                                       TATGAATTAGGTGTCAGCCCCTTCTGGCTAGGCTTAATTGCCATCGCCGCCTGCCTTGGACACATCTGGCCCGTTTTCTTCGGATTTAAAGGAG                                                       <  SRR4302543.4843227/94‑1 (MQ=60)

                                       TATGAATTAGGTGTCAGCCCCTTCTGGCTAGGCTTAATTGCCATCGCCGCCTGCCTTGGACACATCTGGCCCGTTTTCTTCGGATTTAAAGGAG                                                       <  SRR4302543.3381085/94‑1 (MQ=60)

                                       TATGAATTAGGTGTCAGCCCCTTCTGGCTAGGCTTAATTGCCATCGCCGCCTGCCTTGGACACATCTGGCCCGTTTTCTTCGGATTTAAAGGAG                                                       >  SRR4302543.5509920/1‑94 (MQ=60)

                                        ATGAATTAGGTGTCAGCCCCTTCTGGCTAGGCTTAATTGCCATCTCCGCCTGCCTTGGACACATCTGGCCCGTTTTCTTCGGATTTAAAGGAGG                                                      <  SRR4302543.1994732/94‑1 (MQ=60)

                                        ATGAATTAGGTGTCAGCCCCTTCTGGCTAGGCTTAATTGCCATCGCCGCCTGCCTTGGACACATCTGGCCCGTTTTCTTCGGATTTAAAGGAGG                                                      >  SRR4302543.2246952/1‑94 (MQ=60)

                                        ATGAATTAGGTGTCAGCCCCTTCTGGCTAGGCTTAATTGCCATCGCCGCCTGCCTTGGACACATCTGGCCCGTTTTCTTCGGATTTAAAGGAGG                                                      >  SRR4302543.2246953/1‑94 (MQ=60)

                                         TGAATTAGGTGTCAGCCCCTTCTGGCTAGGCTTAATTGCCATCGCCGCCTGCCTTGGACACATCTGGCCCGTTTTCTTCGGATTTAAAGGAGGA                                                     >  SRR4302543.185081/1‑94 (MQ=60)

                                          GAATTAGGTGTCAGCCCCTTCTGGCTAGGCTTAATTGCCATCGCCGCCTGCCTTGGACACATCTGGCCCGTTTTCTTCGGATTTAAAGGAGGAA                                                    >  SRR4302543.5761663/1‑94 (MQ=60)

                                          GAATTAGGTGTCAGCCCCTTCTGGCTAGGCTTAATTGCCATCGCCGCCTGCCTTGGACACATCTGGCCCGTTTTCTTCGGATTTAAAGGAGGAA                                                    <  SRR4302543.723381/94‑1 (MQ=60)

                                          GAATTAGGTGTCAGCCCCTTCTGGCTAGGCTTAATTGCCATCGCCGCCTGCCTTGGACACATCTGGCCCGTTTTCTTCGGATTTAAAGGAGGAA                                                    >  SRR4302543.4522390/1‑94 (MQ=60)

                                          GAATTAGGTGTCAGCCCCTTCTGGCTAGGCTTAATTGCCATCGCCGCCTGCCTTGGACACATCTGGCCCGTTTTCTTCGGATTTAAAGGAGGAA                                                    <  SRR4302543.6831504/94‑1 (MQ=60)

                                           AATTAGGTGTCAGCCCCTTCTGGCTAGGCTTAATTGCCATCGCCGCCTGCCTTGGACACATCTGGCCCGTTTTCTTCGGATTTAAAGGAGGAAA                                                   >  SRR4302543.5349402/1‑94 (MQ=60)

                                           AATTAGGTGTCAGCCCCTTCTGGCTAGGCTTAATTGCCATCGCCGCCTGCCTTGGACACATCTGGCCCGTTTTCTTCGGATTTAAAGGAGGAAA                                                   <  SRR4302543.7757005/94‑1 (MQ=60)

                                           AATTAGGTGTCAGCCCCTTCTGGCTAGGCTTAATTGCCATCGCCGCCTGCCTTGGACACATCTGGCCCGTTTTCTTCGGATTTAAAGGAGGAAA                                                   >  SRR4302543.6494426/1‑94 (MQ=60)

                                           AATTAGGTGTCAGCCCCTTCTGGCTAGGCTTAATTGCCATCGCCGCCTGCCTTGGACACATCTGGCCCGTCTTCTTCGGATTTAAAGGAGGAAA                                                   >  SRR4302543.2430140/1‑94 (MQ=60)

                                             TTAGGTGTCAGCCCCTTCTGGCTAGGCTTAATTGCCATCGCCGCCTGCCTTGGACACATCTGGCCCGTTTTCTTCGGATTTAAAGGAGGAAAAG                                                 <  SRR4302543.6156711/94‑1 (MQ=60)

                                             TTAGGTGTCAGCCCCTTCTGGCTAGGCTTAATTGCCATCGCCGCCTGCCTTGGACACATCTGGCCCGTTTTCTTCGGATTTAAAGGAGGAAAAG                                                 >  SRR4302543.2787918/1‑94 (MQ=60)

                                             TTAGGTGTCAGCCCCTTCTGGCTAGGCTTAATTGCCATCGCCGCCTGCCTTGGACACATCTGGCCCGTTTTCTTCGGATTTAAAGGAGGAAAAG                                                 <  SRR4302543.7261914/94‑1 (MQ=60)

                                              TAGGTGTCAGCCCCTTCTGGCTAGGCTTAATTGCCATCGCCGCCTGCCTTGGACACATCTGGCCCGTTTTCTTCGGATTTAAAGGAGGAAAAGG                                                <  SRR4302543.1051896/94‑1 (MQ=60)

                                              TAGGTGTCAGCCCCTTCTGGCTAGGCTTAATTGCCATCGCCGCCTGCCTTGGACACATCTGGCCCGTTTTCTTCGGATTTAAAGGAGGAAAAGG                                                <  SRR4302543.3369339/94‑1 (MQ=60)

                                               AGGTGTCAGCCCCTTCTGGCTAGGCTTAATTGCCATCGCCGCCTGCCTTGGACACATCTGGCCCGTTTTCTTCGGATTTAAAGGAGGAAAAGGC                                               >  SRR4302543.2422263/1‑94 (MQ=60)

                                               AGGTGTCAGCCCCTTCTGGCTAGGCTTAATTGCCATCGCCGCCTGCCTTGGACACATCTGGCCCGTTTTCTTCGGATTTAAAGGAGGAAAAGGC                                               >  SRR4302543.2703698/1‑94 (MQ=60)

                                                GGTGTCAGCCCCTTCTTGCTAGGCTTAATTGCCATCGCCGCCTGCCTTGGACACATCTGGCCCGTTTTCTTCGGATTTAAAGGAGGAAAAGGCG                                              <  SRR4302543.2383206/94‑1 (MQ=60)

                                                GGTGTCAGCCCCTTCTGGCTAGGCTTAATTGCCATCGCCGCCTGCCTTGGACACATCTGGCCCGTTTTCTTCGGATTTAAAGGAGGAAAAGGCG                                              <  SRR4302543.3495066/94‑1 (MQ=60)

                                                GGTGTCAGCCCCTTCTGGCTAGGCTTAATTGCCATCGCCGCCTGCCTTGGACACATCTGGCCCGTTTTCTTCGGATTTAAAGGAGGAAAAGGCG                                              <  SRR4302543.6896209/94‑1 (MQ=60)

                                                GGTGTCAGCCCCTTCTGGCTAGGCTTAATTGCCATCGCCGCCTGCCTTGGACACATCTGGCCCGTTTTCTTCGGATTTAAAGGAGGAAAAGGCG                                              <  SRR4302543.5642582/94‑1 (MQ=60)

                                                  TGTCAGCCCCTTCTGGCTAGGCTTAATTGCCATCGCCGCCTGCCTTGGACACATCTGGCCCGTTTTCTTCGGATTTAAAGGAGGAAAAGGCGTT                                            <  SRR4302543.6941964/94‑1 (MQ=60)

                                                   GTCAGCCCCTTCTGGCTAGGCTTAATTGCCATCGCCGCCTGCCTTGGACACATCTGGCCCGTTTTCTTCGGATTTAAAGGAGGAAAAGGCGTTG                                           >  SRR4302543.5128032/1‑94 (MQ=60)

                                                    TCAGCCCCTTCTGGCTAGGCTTAATTGCCATCGCCGCCTGCCTTGGACACATCTGGCCCGTTTTCTTCGGATTTAAAGGAGGAAAAGGCGTTGC                                          >  SRR4302543.1077636/1‑94 (MQ=60)

                                                    TCAGCCCCTTCTGGCTAGGCTTAATTGCCATCGCCGCCTGCCTTGGACACATCTGGCCCGTTTTCTTCGGATTTAAAGGAGGAAAAGGCGTTGC                                          >  SRR4302543.1077637/1‑94 (MQ=60)

                                                     CAGCCCCTTCTGGCTAGGCTTAATTGCCATCGCCGCCTGCCTTGGACACATCTGGCCCGTTTTCTTCGGATTTAAAGGAGGAAAAGGCGTTGCT                                         >  SRR4302543.4953458/1‑94 (MQ=60)

                                                     CAGCCCCTTCTGGCTAGGCTTAATTGCCATCGCCGCCTGCCTTGGACACATCTGGCCCGTTTTCTTCGGATTTAAAGGAGGAAAAGGCGTTGCT                                         >  SRR4302543.5847145/1‑94 (MQ=60)

                                                     CAGCCCCTTCTGGCTAGGCTTAATTGCCATCGCCGCCTGCCTTGGACACATCTGGCCCGTTTTCTTCGGATTTAAAGGAGGAAAAGGCGTTGCT                                         <  SRR4302543.222262/94‑1 (MQ=60)

                                                      AGCCCCTTCTGGCTAGGCTTAATTGCCATCGCCGCCTGCCTTGGACACATCTGGCCCGTTTTCTTCGGATTTAAAGGAGGAAAAGGCGTTGCTA                                        <  SRR4302543.6552271/94‑1 (MQ=60)

                                                      AGCCCCTTCTGGCTAGGCTTAATTGCCATCGCCGCCTGCCTTGGACACATCTGGCCCGTTTTCTTCGGATTTAAAGGAGGAAAAGGCGTTGCTA                                        >  SRR4302543.3573698/1‑94 (MQ=60)

                                                      AGCCCCTTCTGGCTAGGCTTAATTGCCATCGCCGCCTGCCTTGGACACATCTGGCCCGTTTTCTTCGGATTTAAAGGAGGAAAAGGCGTTGCTA                                        >  SRR4302543.4034622/1‑94 (MQ=60)

                                                      AGCCCCTTCTGGCTAGGCTTAATTGCCATCGCCGCCTGCCTTGGACACATCTGGCCCGTTTTCTTCGGATTTAAAGGAGGAAAAGGCGTTGCTA                                        >  SRR4302543.2199847/1‑94 (MQ=60)

                                                      AGCCCCTTCTGGCTAGGCTTAATTGCCATCGCCGCCTGCCTTGGACACATCTGGCCCGTTTTCTTCGGATTTAAAGGAGGAAAAGGCGTTGCTA                                        >  SRR4302543.2370106/1‑94 (MQ=60)

                                                        CCCCTTCTGGCTAGGCTTAATTGCCATCGCCGCCTGCCTTGGACACATCTGGCCCGTTTTCTTCGGATTTAAAGGAGGAAAAGGCGTTGCTACC                                      >  SRR4302543.5546469/1‑94 (MQ=60)

                                                        CCCCTTCTGGCTAGGCTTAATTGCCATCGCCGCCTGCCTTGGACACATCTGGCCCGTTTTCTTCGGATTTAAAGGAGGAAAAGGCGTTGCTACC                                      <  SRR4302543.7580390/94‑1 (MQ=60)

                                                        CCCCTTCTGGCTAGGCTTAATTGCCATCGCCGCCTGCCTTGGACACATCTGGCCCGTTTTCTTCGGATTTAAAGGAGGAAAAGGCGTTGCTACC                                      <  SRR4302543.4950743/94‑1 (MQ=60)

                                                         CCCTTCTGGCTAGGCTTAATTGCCATCGCCGCCTGCCTTGGACACATCTGGCCCGTTTTCTTCGGATTTAAAGGAGGAAAAGGCGTTGCTACCG                                     >  SRR4302543.4560270/1‑94 (MQ=60)

                                                         CCCTTCTGGCTAGGCTTAATTGCCATCGCCGCCTGCCTTGGACACATCTGGCCCGTTTTCTTCGGATTTAAAGGAGGAAAAGGCGTTGCTACCG                                     >  SRR4302543.3831070/1‑94 (MQ=60)

                                                          CCTTCTGGCTAGGCTTAATTGCCATCGCCGCCTGCCTTGGACACATCTGGCCCGTTTTCTTCGGATTTAAAGGAGGAAAAGGCGTTGCTACCGC                                    >  SRR4302543.5884649/1‑94 (MQ=60)

                                                          CCTTCTGGCTAGGCTTAATTGCCATCGCCGCCTGCCTTGGACACATCTGGCCCGTTTTCTTCGGATTTAAAGGAGGAAAAGGCGTTGCTACCGC                                    >  SRR4302543.5884435/1‑94 (MQ=60)

                                                          CCTTCTGGCTAGGCTTAATTGCCATCGCCGCCTGCCTTGGACACATCTGGCCCGTTTTCTTCGGATTTAAAGGAGGAAAAGGCGTTGCTACCGC                                    <  SRR4302543.7952381/94‑1 (MQ=60)

                                                          CCTTCTGGCTAGGCTTAATTGCCATCGCCGCCTGCCTTGGACACATCTGGCCCGTTTTCTTCGGATTTAAAGGAGGAAAAGGCGTTGCTACCGC                                    >  SRR4302543.1534330/1‑94 (MQ=60)

                                                           CTTCTGGCTAGGCTTAATTGCCATCGCCGCCTGCCTTGGACACATCTGGCCCGTTTTCTTCGGATTTAAAGGAGGAAAAGGCGTTGCTACCGCT                                   >  SRR4302543.19715/1‑94 (MQ=60)

                                                           CTTCTGGCTAGGCTTAATTGCCATCGCCGCCTGCCTTGGACACATCTGGCCCGTTTTCTTCGGATTTAAAGGAGGAAAAGGCGTTGCTACCGCT                                   >  SRR4302543.3351594/1‑94 (MQ=60)

                                                           CTTCTGGCTAGGCTTAATTGCCATCGCCGCCTGCCTTGGACACATCTGGCCCGTTTTCTTCGGATTTAAAGGAGGAAAAGGCGTTGCTACCGCT                                   >  SRR4302543.4847542/1‑94 (MQ=60)

                                                           CTTCTGGCTAGGCTTAATTGCCATCGCCGCCTGCCTTGGACACATCTGGCCCGTTTTCTTCGGATTTAAAGGAGGAAAAGGCGTTGCTACCGCT                                   >  SRR4302543.3351595/1‑94 (MQ=60)

                                                           CTTCTGGCTAGGCTTAATTGCCATCGCCGCCTGCCTTGGACACATCTGGCCCGTTTTCTTCGGATTTAAAGGAGGAAAAGGCGTTGCTACCGCT                                   >  SRR4302543.4847541/1‑94 (MQ=60)

                                                            TTCTGGCTAGGCTTAATTGCCATCGCCGCCTGCCTTGGACACATCTGGCCCGTTTTCTTCGGATTTAAAGGAGGAAAAGGCGTTGCTACCGCTT                                  <  SRR4302543.6572680/94‑1 (MQ=60)

                                                              TTGGCTAGGCTTAATTGCCATCGCCGCCTGCCTTGGACACATCTGGCCCGTTTTCTTCGGATTTAAAGGAGGAAAAGGCGTTGCTACCGCTTTT                                <  SRR4302543.4324689/94‑1 (MQ=60)

                                                              CTGGCTAGGCTTAATTGCCATCGCCGCCTGCCTTGGACACATCTGGCCCGTTTTCTTCGGATTTAAAGGAGGAAAAGGCGTTGCTACCGCTTTT                                >  SRR4302543.7903504/1‑94 (MQ=60)

                                                              CTGGCTAGGCTTAATTGCCATCGCCGCCTGCCTTGGACACATCTGGCCCGTTTTCTTCGGATTTAAAGGAGGAAAAGGCGTTGCTACCGCTTTT                                >  SRR4302543.6181252/1‑94 (MQ=60)

                                                              CTGGCTAGGCTTAATTGCCATCGCCGCCTGCCTTGGACACATCTGGCCCGTTTTCTTCGGATTTAAAGGAGGAAAAGGCGTTGCTACCGCTTTT                                >  SRR4302543.6181251/1‑94 (MQ=60)

                                                              CTGGCTAGGCTTAATTGCCATCGCCGCCTGCCTTGGACACATCTGGCCCGTTTTCTTCGGATTTAAAGGAGGAAAAGGCGTTGCTACCGCTTTT                                >  SRR4302543.6995150/1‑94 (MQ=60)

                                                              CTGGCTAGGCTTAATTGCCATCGCCGCCTGCCTTGGACACATCTGGCCCGTTTTCTTCGGATTTAAAGGAGGAAAAGGCGTTGCTACCGCTTTT                                <  SRR4302543.4879869/94‑1 (MQ=60)

                                                              CTGGCTAGGCTTAATTGCCATCGCCGCCTGCCTTGGACACATCTGGCCCGTTTTCTTCGGATTTAAAGGAGGAAAAGGCGTTGCTACCGCTTTT                                >  SRR4302543.7751667/1‑94 (MQ=60)

                                                                GGCTAGGCTTAATTGCCATCGCCGCCTGCCTTGGACACATCTGGCCCGTTTTCTTCGGATTTAAAGGAGGAAAAGGCGTTGCTACCGCTTTTGG                              <  SRR4302543.4628585/94‑1 (MQ=60)

                                                                GGCTAGGCTTAATTGCCATCGCCGCCTGCCTTGGACACATCTGGCCCGTTTTCTTCGGATTTAAAGGAGGAAAAGGCGTTGCTACCGCTTTTGG                              >  SRR4302543.4138645/1‑94 (MQ=60)

                                                                GGCTAGGCTTAATTGCCATCGCCGCCTGCCTTGGACACATCTGGCCCGTTTTCTTCGGATTTAAAGGAGGAAAAGGCGTTGCTACCGCTTTTGG                              >  SRR4302543.5325356/1‑94 (MQ=60)

                                                                 GCTAGGCTTAATTGCCATCGCCGCCTGCCTTGGACACATCTGGCCCGTTTTCTTCGGATTTAAAGGAGGAAAAGGCGTTGCTACCGCTTTTGGT                             <  SRR4302543.293440/94‑1 (MQ=60)

                                                                 GCTAGGCTTAATTGCCATCGCCGCCTGCCTTGGACACATCTGGCCCGTTTTCTTCGGATTTAAAGGAGGAAAAGGCGTTGCTACCGCTTTTGGT                             <  SRR4302543.5160997/94‑1 (MQ=60)

                                                                  CTAGGCTTAATTGCCATCGCCGCCTGCCTTGGACACATCTGGCCCGTTTTCTTCGGATTTAAAGTAGGTAAAGGTGTTGCTACCGCTTTTGGTG                            >  SRR4302543.3135013/1‑94 (MQ=60)

                                                                  CTAGGCTTAATTGCCATCGCCGCCTGCCTTGGACACATCTGGCCCGTTTTCTTCGGATTTAAAGGAGGAAAAGGCGTTGCTACCGCTTTTGGTG                            >  SRR4302543.27982/1‑94 (MQ=60)

                                                                  CTAGGCTTAATTGCCATCGCCGCCTGCCTTGGACACATCTGGCCCGTTTTCTTCGGATTTAAAGGAGGAAAAGGCGTTGCTACCGCTTTTGGTG                            >  SRR4302543.3135012/1‑94 (MQ=60)

                                                                   TAGGCTTAATTGCCATCGCCGCCTGCCTTGGACACATCTGGCCCGTTTTCTTCGGATTTAAAGGAGGAAAAGGCGTTGCTACCGCTTTTGGTGC                           >  SRR4302543.4758576/1‑94 (MQ=60)

                                                                   TAGGCTTAATTGCCATCGCCGCCTGCCTTGGACACATCTGGCCCGTTTTCTTCGGATTTAAAGGAGGAAAAGGCGTTGCTACCGCTTTTGGTGC                           >  SRR4302543.3390867/1‑94 (MQ=60)

                                                                    AGGCTTAATTGCCATCGCCGCCTGCCTTGGACACATCTGGCCCGTTTTCTTCGGATTTAAAGGAGGAAAAGGCGTTGCTACCGCTTTTGGTGCC                          >  SRR4302543.6083292/1‑94 (MQ=60)

                                                                    AGGCTTAATTGCCATCGCCGCCTGCCTTGGACACATCTGGCCCGTTTTCTTCGGATTTAAAGGAGGAAAAGGCGTTGCTACCGCTTTTGGTGCC                          <  SRR4302543.7703806/94‑1 (MQ=60)

                                                                     GGCTTAATTGCCATCGCCGCCTGCCTTGGACACATCTGGCCCGTTTTCTTCGGATTTAAAGGAGGAAAAGGCGTTGCTACCGCTTTTGGTGCCA                         >  SRR4302543.2313837/1‑94 (MQ=60)

                                                                     GGCTTAATTGCCATCGCCGCCTGCCTTGGACACATCTGGCCCGTTTTCTTCGGATTTAAAGGAGGAAAAGGCGTTGCTACCGCTTTTGGTGCCA                         <  SRR4302543.4806130/94‑1 (MQ=60)

                                                                     GGCTTAATTGCCATCGCCGCCTGCCTTGGACACATCTGGCCCGTTTTCTTCGGATTTAAAGGAGGAAAAGGCGTTGCTACCGCTTTTGGTGCCA                         >  SRR4302543.6180759/1‑94 (MQ=60)

                                                                     GGCTTAATTGCCATCGCCGCCTGCCTTGGACACATCTGGCCCGTTTTCTTCGGATTTAAAGGAGGAAAAGGCGTTGCTACCGCTTTTGGTGCCA                         >  SRR4302543.6557013/1‑94 (MQ=60)

                                                                     GGCTTAATTGCCATCCCCGTCTGCCTTGGCCACATCTGGCCCGTTTTCTTCGGATTTAAAGGAGGAAAAGGCGTTGCTACCGCTTTTGGTGCCA                         <  SRR4302543.4806129/94‑1 (MQ=60)

                                                                      GCTTAATTGCCATCGCCGCCTGCCTTGGACACATCTGGCCCGTTTTCTTCGGATTTAAAGGAGGAAAAGGCGTTGCTACCGCTTTTGGTGCCAT                        >  SRR4302543.1897770/1‑94 (MQ=60)

                                                                      GCTTAATTGCCATCGCCGCCTGCCTTGGACACATCTGGCCCGTTTTCTTCGGATTTAAAGGAGGAAAAGGCGTTGCTACCGCTTTTGGTGCCAT                        >  SRR4302543.2869252/1‑94 (MQ=60)

                                                                       CTTAATTGCCATCGCCGCCTGCCTTGGACACATCTGGCCCGTTTTCTTCGGATTTAAAGGAGGAAAAGGCGTTGCTACCGCTTTTGGTGCCATC                       >  SRR4302543.4680040/1‑94 (MQ=60)

                                                                       CTTAATTGCCATCGCCGCCTGCCTTGGACACATCTGGCCCGTTTTCTTCGGATTTAAAGGAGGAAAAGGCGTTGCTACCGCTTTTGGTGCCATC                       >  SRR4302543.3734817/1‑94 (MQ=60)

                                                                       CTTAATTGCCATCGCCGCCTGCCTTGGACACATCTGGCCCGTTTTCTTCGGATTTAAAGGAGGAAAAGGCGTTGCTACCGCTTTTGGTGCCATC                       <  SRR4302543.4088873/94‑1 (MQ=60)

                                                                       CTTAATTGCCATCGCCGCCTGCCTTGGACACATCCGGCCCGTTTTCTTCGGATTTAAAGGAGGAAAAAGCGTTGCTACCGCTTTTGGTGCCATC                       >  SRR4302543.5634534/1‑94 (MQ=60)

                                                                        TTAATTGCCATCGCCGCCTGCCTTGGACACATCTGGCCCGTTTTCTTCGGATTTAAAGGAGGAAAAGGCGTTGCTACCGCTTTTGGTGCCATCG                      >  SRR4302543.2848574/1‑94 (MQ=60)

                                                                        TTAATTGCCATCGCCGCCTGCCTTGGACACATCTGGCCCGTTTTCTTCGGATTTAAAGGAGGAAAAGGCGTTGCTACCGCTTTTGGTGCCATCG                      >  SRR4302543.2190996/1‑94 (MQ=60)

                                                                         TAATTGCCATCGCCGCCTGCCTTGGACACATCTGGCCCGTTTTCTTCGGATTTAAAGGAGGAAAAGGCGTTGCTACCGCTTTTGGTGCCATCGC                     >  SRR4302543.7079530/1‑94 (MQ=60)

                                                                               CCATCGCCGCCTGCCTTGGACACATCTGGCCCGTTTTCTTCGGATTTAAAGGAGGAAAAGGCGTTGCTACCGCTTTTGGTGCCATCGCACCCAT               >  SRR4302543.5411542/1‑94 (MQ=60)

                                                                               CCATCGCCGCCTGCCTTGGACACATCTGGCCCGTTTTCTTCGGATTTAAAGGAGGAAAAGGCGTTGCTACCGCTTTTGGTGCCATCGCACCCAT               >  SRR4302543.6988665/1‑94 (MQ=60)

                                                                                CATCGCCGCCTGCCTTGGACACATCTGGCCCGTTTTCTTCGGATTTAAAGGAGGAAAAGGCGTTGCTACCGCTTTTGGTGCCATCGCACCCATT              >  SRR4302543.7654966/1‑94 (MQ=60)

                                                                                CATCGCCGCCTGCCTTGGACACATCTGGCCCGTTTTCTTCGGATTTAAAGGAGGAAAAGGCGTTGCTACCGCTTTTGGTGCCATCGCACCCATT              <  SRR4302543.4509731/94‑1 (MQ=60)

                                                                                CATCGCCGCCTGCCTTGGACACATCTGGCCCGTTTTCTTCGGATTTAAAGGAGGAAAAGGCGTTGCTACCGCTTTTGGTGCCATCGCACCCATT              >  SRR4302543.6407265/1‑94 (MQ=60)

                                                                                 ATCGCCGCCTGCCTTGGACACATCTGGCCCGTTTTCTTCGGATTTAAAGGAGGAAAAGGCGTTGCTACCGCTTTTGGTGCCATCGCACCCATTG             >  SRR4302543.5081849/1‑94 (MQ=60)

                                                                                 ATCGCCGCCTGCCTTGGACACATCTGGCCCGTTTTCTTCGGATTTAAAGGAGGAAAAGGCGTTGCTACCGCTTTTGGTGCCATCGCACCCATTG             >  SRR4302543.7767451/1‑94 (MQ=60)

                                                                                 ATCGCCGCCTGCCTTGGACACATCTGGCCCGTTTTCTTCGGATTTAAAGGAGGAAAAGGCGTTGCTACCGCTTTTGGTGCCATCGCACCCATTG             >  SRR4302543.2325671/1‑94 (MQ=60)

                                                                                   CGCCGCCTGCCTTGGACACATCTGGCCCGTTTTCTTCGGATTTAAAGGAGGAAAAGGCGTTGCTACCGCTTTTGGTGCCATCGCACCCATTGGC           >  SRR4302543.6226674/1‑94 (MQ=60)

                                                                                   CGCCGCCTGCCTTGGACACATCTGGCCCGTTTTCTTCGGATTTAAAAGAGGAAAAGGCGTTGCTACCGCTTTTGGTGCCATCGCACCCATTGGC           <  SRR4302543.3704801/94‑1 (MQ=60)

                                                                                    GCCGCCTGCCTTGGACACATCTGGCCCGTTTTCTTCGGATTTAAAGGAGGAAAAGGCGTTGCTACCGCTTTTGGTGCCATCGCACCCATTGGCT          <  SRR4302543.175828/94‑1 (MQ=60)

                                                                                      CGCCTGCCTTGGACACATCTGGCCCGTTTTCTTCGGATTTAAAGGAGGAAAAGTCGTTGCTACCGCTTTTGGTGCCATCACACCCATTGGCTGG        >  SRR4302543.7807699/1‑94 (MQ=60)

                                                                                      CGCCTGCCTTGGACACATCTGGCCCGTTTTCTTCGGATTTAAAGGAGGAAAAGGCGTTGCTACCGCTTTTGGTGCCATCGCACCCATTGGCTGG        <  SRR4302543.984819/94‑1 (MQ=60)

                                                                                      CGCCTGCCTTGGACACATCTGGCCCGTTTTCTTCGGATTTAAAGGAGGAAAAGGCGTTGCTACCGCTTTTGGTGCCATCGCACCCATTGGCTGG        >  SRR4302543.3313557/1‑94 (MQ=60)

                                                                                       GCCTGCCTTGGACACATCTGGCCCGTTTTCTTCGGATTTAAAGGAGGAAAAGGCGTTGCTACCGCTTTTGGTGCCATCGCACCCATTGGCTGGG       <  SRR4302543.7458136/94‑1 (MQ=60)

                                                                                       GCCTGCCTTGGACACATCTGGCCCGTTTTCTTCGGATTTAAAGGAGGAAAAGGCGTTGCTACCGCTTTTGGTGCCATCGCACCCATTGGCTGGG       <  SRR4302543.4665994/94‑1 (MQ=60)

                                                                                       GCCTGCCTTGGACACATCTGGCCCGTTTTCTTCGGATTTAAAGGAGGAAAAGGCGTTGCTACCGCTTTTGGTGCCATCGCACCCATTGGCTGGG       <  SRR4302543.6609443/94‑1 (MQ=60)

                                                                                        CCTGCCTTGGACACATCTGGCCCGTTTTCTTCGGATTTAAAGGAGGAAAAGGCGTTGCTACCGCTTTTGGTGCCATCGCACCCATTGGCTGGGA      >  SRR4302543.2622611/1‑94 (MQ=60)

                                                                                         CTGCCTTGGACACATCTGGCCCGTTTTCTTCGGATTTAAAGGAGGAAAAGGCGTTGCTACCGCTTTTGGTGCCATCGCCCCCATTGGCTGGGCT     >  SRR4302543.3354963/1‑94 (MQ=60)

                                                                                         CTGCCTTGGACACATCTGGCCCGTTTTCTTCGGATTTAAAGGAGGAAAAGGCGTTGCTACCGCTTTTGGTGCCATCGCACCCATTGGCTGGGAT     >  SRR4302543.3354962/1‑94 (MQ=60)

                                                                                          TGCCTTGGACACATCTGGCCCGTTTTCTTCGGATTTAAAGGAGGAAAAGGCGTTGCTACCGCTTTTGGTGCCATCGCACCCATTGGCTGGGATC    <  SRR4302543.4939780/94‑1 (MQ=60)

                                                                                           GCCTTGGACACATCTGGCCCGTTTTCTTCGGATTTAAAGGAGGAAGAGGCGTTGCTCCCGCTTTTGGTGCCATCGCACCCATTGGCTGGGATCT   <  SRR4302543.7064048/94‑1 (MQ=60)

                                                                                           GCCTTGGACACATCTGGCCCGTTTTCTTCGGATTTAAAGGAGGAAAAGGCGTTGCTACCGCTTTTGGTGCCATCGCACCCATTGGCTGGGGTCT   >  SRR4302543.3043119/1‑94 (MQ=60)

                                                                                           GCCTTGGACACATCTGGCCCGTTTTCTTCGGATTTAAAGGAGGAAAAGGCGTTGCTACCGCTTTTGGTGCCATCGCACCCATTGGCTGGGATCT   <  SRR4302543.815334/94‑1 (MQ=60)

                                                                                            CCTTGGACACATCTGGCCCGTTTTCTTCGGATTTAAAGGAGGAAAAGGCGTTGCTACCGCTTTTGGTGCCATCGCACCCATTGGCTGGGATCTC  <  SRR4302543.2301062/94‑1 (MQ=60)

TTCGACGTTCTGAAAGGAATGTTGCCCGTCTGGGGCGCGTATGAATTAGGTGTCAGCCCCTTCTGGCTAGGCTTAATTGCCATCGCCGCCTGTCTTGGACACATCTGGCCCGTTTTCTTCGGATTTAAAGGAGGAAAAGGCGTTGCTACCGCTTTTGGTGCCATCGCACCCATTGGCTGGGATCTC  >  NC_000913/3202515‑3202700

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 0 ≤` `ATCG/ATCG` `< 6 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`