Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.

ALE, Flask, Isolate	Predicted Mutations	Mean Coverage	Total Reads	Percent Mapped	Mapped Reads	Average Read Length
A1 F1 I1 R1	1696	279.3	15874187	97.8%	15524954	93.0

Breseq alignment

BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	3,210,743	A→G	Q19R (CAA→CGA)	rpoD →	RNA polymerase sigma(70)

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	3,210,743	0	A	G	100.0%	1191.9 / NA	372	Q19R (CAA→CGA)	rpoD	RNA polymerase sigma(70)
Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (173/199); total (173/199)

Only 100 of 380 total aligned reads displayed.

CACCAACCTCATGAAATAAGTGTGGATACCGTCTTATGGAGCAAAACCCGCAGTCACAGCTGAAACTTCTTGTCACCCGTGGTAAGGAGCAAGGCTATCTGACCTATGCCGAGGTCAATGACCATCTGCCGGAAGATATCGTCGATTCAGATCAGATCGAAGACATCATCCAAATGATCA  >  NC_000913/3210653‑3210832

  ccAACCTCATGAAATAAGTGTGGATACCGTCTTATGGAGCAAAACCCGCAGTCACAGCTGAAACTTCTTGTCACCCGTGGTAAGGAGCGAGGc                                                                                       <  2:6496329/93‑1 (MQ=255)

  ccAACCTCATGAAATAAGTGTGGATACCGTCTTATGGAGCAAAACCCGCAGTCACAGCTGAAACTTCTTGTCACCCGTGGTAAGGAGCGAGGc                                                                                       >  1:2368537/1‑93 (MQ=255)

   cAACCTCATGAAATAAGTGTGGATACCGTCTTATGGAGCAAAACCCGCAGTCACAGCTGAAACTTCTTGTCACCCGTGGTAAGGAGCGAGGCt                                                                                      >  1:5500572/1‑93 (MQ=255)

    aaCCTCATGAAATAAGTGTGGATACCGTCTTATGGAGCAAAACCCGCAGTCACAGCTAAAACTTCTTGTCACCCGTGGTAAGGAGCGAGGCTa                                                                                     >  2:1170992/1‑93 (MQ=255)

     aCCTCATGAAATAAGTGTGGATACCGTCTTATGGAGCAAAACCCGCAGTCACAGCTGAAACTTCTTGTCACCCGTGGTAAGGAGCGAGGCTAt                                                                                    >  1:5717584/1‑93 (MQ=255)

     aCCTCATGAAATAAGTGTGGATACCGTCTTATGGAGCAAAACCCGCAGTCACAGCTGAAACTTCTTGTCACCCGTGGTAAGGAGCGAGGCTAt                                                                                    <  2:2861572/93‑1 (MQ=255)

      ccTCATGAAATAAGTGTGGATACCGTCTTATGGAGCAAAACCCGCAGTCACAGCTGAAACTTCTTGTCACCCGTGGTAAGGAGCGAGGCTATc                                                                                   <  2:7397740/93‑1 (MQ=255)

       cTCATGAAATAAGTGTGGATACCGTCTTATGGAGCAAAACCCGCAGTCACAGCTGAAACTTCTTGTCACCCGTGGTAAGGAGCGAGGCTATCt                                                                                  >  2:1345500/1‑93 (MQ=255)

       cTCATGAAATAAGTGTGGATACCGTCTTATGGAGCAAAACCCGCAGTCACAGCTGAAACTTCTTGTCACCCGTGGTAAGGAGCGAGGCTATCt                                                                                  >  2:6073875/1‑93 (MQ=255)

        tCATGAAATAAGTGTGGATACCGTCTTATGGAGCAAAACCCGCAGTCACAGCTGAAACTTCTTGTCACCCGTGGTAAGGAGCGAGGCTATCTg                                                                                 >  2:7155367/1‑93 (MQ=255)

        tCATGAAATAAGTGTGGATACCGTCTTATGGAGCAAAACCCGCAGTCACAGCTGAAACTTCTTGTCACCCGTGGTAAGGAGCGAGGCTATCTg                                                                                 >  2:3300321/1‑93 (MQ=255)

            gAAATAAGTGTGGATACCGTCTTATGGAGCAAAACCCGCAGTCACAGCTGAAACTTCTTGTCACCCGTGGTAAGGAGCGAGGCTATCTGACCt                                                                             <  2:2991008/93‑1 (MQ=255)

             aaaTAAGTGTGGATACCGTCTTATGGAGCAAAACCCGCAGTCACAGCTGAAACTTCTTGTCACCCGTGGTAAGGAGCGAGGCTATCTGACCTa                                                                            >  2:5087821/1‑93 (MQ=255)

                tAAGTGTGGATACCGTCTTATGGAGCAAAACCCGCAGTCACAGCTGAAACTTCTTGTCACCCGTGGTAAGGAGCGAGGCTATCTGACCTATGc                                                                         <  1:1079584/93‑1 (MQ=255)

                tAAGTGTGGATACCGTCTTATGGAGCAAAACCCGCAGTCACAGCTGAAACTTCTTGTCACCCGTGGTAAGGAGCGAGGCTATCTGACCTATGc                                                                         <  1:6329179/93‑1 (MQ=255)

                tAAGTGTGGATACCGTCTTATGGAGCAAAACCCGCAGTCACAGCTGAAACTTCTTGTCACCCGTGGTAAGGAGCGAGGCTATCTGACCTATGc                                                                         >  2:4124001/1‑93 (MQ=255)

                 aaGTGTGGATACCGTCTTATGGAGCAAAACCCGCAGTCACAGCTGAAACTTCTTGTCACCCGTGGTAAGGAGCGAGGCTATCTGACCTATGcc                                                                        <  1:3364855/93‑1 (MQ=255)

                 aaGTGTGGATACCGTCTTATGGAGCAAAACCCGCAGTCACAGCTGAAACTTCTTGTCACCCGTGGTAAGGAGCGAGGCTATCTGACCTATGcc                                                                        >  2:4800561/1‑93 (MQ=255)

                 aaGTGTGGATACCGTCTTATGGAGCAAAACCCGCAGTCACAGCTGAAACTTCTTGTCACCCGTGGTAAGGAGCGAGGCTATCTGACCTATGcc                                                                        >  2:5789702/1‑93 (MQ=255)

                  aGTGTGGATACCGTCTTATGGAGCAAAACCCGCAGTCACAGCTGAAACTTCTTGTCACCCGTGGTAAGGAGCGAGGCTATCTGACCTATGCCg                                                                       >  2:1624476/1‑93 (MQ=255)

                   gtgtGGATACCGTCTTATGGAGCAAAACCCGCAGTCACAGCTGAAACTTCTTGTCACCCGTGGTAAGGAGCGAGGCTATCTGACCTATGCCGa                                                                      <  1:204827/93‑1 (MQ=255)

                      tgGATACCGTCTTATGGAGCAAAACCCGCAGTCACAGCTGAAACTTCTTGTCACCCGTGGTAAGGAGCGAGGCTATCTGACCTATGCCGAGGt                                                                   <  2:7670871/93‑1 (MQ=255)

                         aTACCGTCTTATGGAGCAAAACCCGCAGTCACAGCTGAAACTTCTTGTCACCCGTGGTAAGGAGCGAGGCTATCTGACCTATGCCGAGGTCaa                                                                <  2:3709490/93‑1 (MQ=255)

                            ccGTCTTATGGAGCAAAACCCGCAGTCACAGCTGAAACTTCTTGTCACCCGTGGTAAGGAGCGAGGCTATCTGACCTATGCCGAGGTCAATGa                                                             <  1:3855568/93‑1 (MQ=255)

                             cGTCTTATGGAGCAAAACCCGCAGTCACAGCTGAAACTTCTTGTCACCCGTGGTAAGGAGCGAGGCTATCTGACCTATGCCGAGGTCAATGAc                                                            <  2:7805071/93‑1 (MQ=255)

                              gTCTTATGGAGCAAAACCCGCAGTCACAGCTGAAACTTCTTGTCACCCGTGGTAAGGAGCGAGGCTATCTGACCTATGCCGAGGTCAATGAcc                                                           >  2:3070433/1‑93 (MQ=255)

                               tCTTATGGAGCAAAACCCGCAGTCACAGCTGAAACTTCTTGTCACCCGTGGTAAGGAGCGAGGCTATCTGACCTATGCCGAGGTCAATGACCa                                                          >  1:3400419/1‑93 (MQ=255)

                                cTTATGGAGCAAAACCCGCAGTCACAGCTGAAACTTCTTGTCACCCGTGGTAAGGAGCGAGGCTATCTGACCTATGCCGAGGTCAATGACCAt                                                         <  2:2080637/93‑1 (MQ=255)

                                 ttATGGAGCAAAACCCGCAGTCACAGCTGAAACTTCTTGTCACCCGTGGTAAGGAGCGAGGCTATCTGACCTATGCCGAGGTCAATGACCATc                                                        <  1:1819039/93‑1 (MQ=255)

                                 ttATGGAGCAAAACCCGCAGTCACAGCTGAAACTTCTTGTCACCCGTGGTAAGGAGCGAGGCTATCTGACCTATGCCGAGGTCAATGACCATc                                                        <  2:2475420/93‑1 (MQ=255)

                                  tATGGAGCAAAACCCGCAGTCACAGCTGAAACTTCTTGTCACCCGTGGTAAGGAGCGAGGCTATCTGACCTATGCCGAGGTCAATGACCATCt                                                       <  1:6646709/93‑1 (MQ=255)

                                  tATGGAGCAAAACCCGCAGTCACAGCTGAAACTTCTTGTCACCCGTGGTAAGGAGCGAGGCTATCTGACCTATGCCGAGGTCAATGACCATCt                                                       >  1:3081977/1‑93 (MQ=255)

                                   aTGGAGCAAAACCCGCAGTCACAGCTGAAACTTCTTGTCACCCGTGGTAAGGAGCGAGGCTATCTGACCTATGCCGAGGTCAATGACCATCTg                                                      <  1:7722780/93‑1 (MQ=255)

                                   aTGGAGCAAAACCCGCAGTCACAGCTGAAACTTCTTGTCACCCGTGGTAAGGAGCGAGGCTATCTGACCTATGCCGAGGTCAATGACCATCTg                                                      <  1:649244/93‑1 (MQ=255)

                                    tGGAGCAAAACCCGCAGTCACAGCTGAAACTTCTTGTCACCCGTGGTAAGGAGCGAGGCTATCTGACCTATGCCGAGGTCAATGACCATCTGc                                                     <  2:2561356/93‑1 (MQ=255)

                                     ggAGCAAAACCCGCAGTCACAGCTGAAACTTCTTGTCACCCGTGGTAAGGAGCGAGGCTATCTGACCTATGCCGAGGTCAATGACCATCTGcc                                                    <  1:4789329/93‑1 (MQ=255)

                                     ggAGCAAAACCCGCAGTCACAGCTGAAACTTCTTGTCACCCGTGGTAAGGAGCGAGGCTATCTGACCTATGCCGAGGTCAATGACCATCTGcc                                                    >  2:3937906/1‑93 (MQ=255)

                                       aGCAAAACCCGCAGTCACAGCTGAAACTTCTTGTCACCCGTGGTAAGGAGCGAGGCTATCTGACCTATGCCGAGGTCAATGACCATCTGCCgg                                                  <  1:97420/93‑1 (MQ=255)

                                        gCAAAACCCGCAGTCACAGCTGAAACTTCTTGTCACCCGTGGTAAGGAGCGAGGCTATCTGACCTATGCCGAGGTCAATGACCATCTGCCGGa                                                 <  1:2146977/93‑1 (MQ=255)

                                        gCAAAACCCGCAGTCACAGCTGAAACTTCTTGTCACCCGTGGTAAGGAGCGAGGCTATCTGACCTATGCCGAGGGCAATGACCATCTGCCGGa                                                 >  1:5747332/1‑93 (MQ=255)

                                         cAAAACCCGCAGTCACAGCTGAAACTTCTTGTCACCCGTGGTAAGGAGCGAGGCTATCTGACCTATGCCGAGGTCAATGACCATCTGCCGGaa                                                <  1:7137622/93‑1 (MQ=255)

                                          aaaaCCCGCAGTCACAGCTGAAACTTCTTGTCACCCGTGGTAAGGAGCGAGGCTATCTGACCTATGCCGAGGTCAATGACCATCTGCCGGAAg                                               <  1:4335584/93‑1 (MQ=255)

                                          aaaaCCCGCAGTCACAGCTGAAACTTCTTGTCACCCGTGGTAAGGAGCGAGGCTATCTGACCTATGCCGAGGTCAATGACCATCTGCCGGAAg                                               >  1:753607/1‑93 (MQ=255)

                                          aaaaCCCGCAGTCACAGCTGAAACTTCTTGTCACCCGTGGTAAGGAGCGAGGCTATCTGACCTATACCGAGGTCAATGACCATCTGCCGGaga                                               >  1:5385880/1‑91 (MQ=255)

                                          aaaaCCCGCAGGCACAGCTGAAACTTCTTGTCACCCGTGGTAAGGAGCGAGGCTATCTGACCTATGCCGAGGTCAATGACCATCTGCCGGGAg                                               >  2:1897993/1‑93 (MQ=255)

                                           aaaCCCGCAGTCACAGCTGAAACTTCTTGTCACCCGTGGTAAGGAGCGAGGCTATCTGACCTATGCCGAGGTCAATGACCATCTGCCGGAAGa                                              <  2:6782282/93‑1 (MQ=255)

                                           aaaCCCGCAGTCACAGCTGAAACTTCTTGTCACCCGTGGTAAGGAGCGAGGCTATCTGACCTATGCCGAGGTCAATGACCATCTGCCGGAAGa                                              >  1:496313/1‑93 (MQ=255)

                                            aaCCCGCAGTCACAGCTGAAACTTCTTGTCACCCGTGGTAAGGAGCGAGGCTATCTGACCTATGCCGAGGTCAATGACCATCTGCCGGAAGat                                             >  1:7581869/1‑93 (MQ=255)

                                             aCCCGCAGTCACAGCTGAAACTTCTTGTCACCCGTGGTAAGGAGCGAGGCTATCTGACCTATGCCGAGGTCAATGACCATCTGCCGGAAGata                                            <  1:6105910/93‑1 (MQ=255)

                                             aCCCGCAGTCACAGCTGAAACTTCTTGTCACCCGTGGTAAGGAGCGAGGCTATCTGACCTATGCCGAGGTCAATGACCATCTGCCGGAAGata                                            <  1:100115/93‑1 (MQ=255)

                                              cccGCAGTCACAGCTGAAACTTCTTGTCACCCGTGGTAAGGAGCGAGGCTATCTGACCTATGCCGAGGTCAATGACCATCTGCCGGAAGatat                                           <  1:1727764/93‑1 (MQ=255)

                                              cccGCAGTCACAGCTGAAACTTCTTGTCACCCGTGGTAAGGAGCGAGGCTATCTGACCTATGCCGAGGTCAATGACCATCTGCCGGAAGatat                                           <  2:1965542/93‑1 (MQ=255)

                                               ccGCAGTCACAGCTGAAACTTCTTGTCACCCGTGGTAAGGAGCGAGGCTATCTGACCTATGCCGAGGTCAATGACCATCTGCCGGAAGATAtc                                          <  1:3690784/93‑1 (MQ=255)

                                               ccGCAGTCACAGCTGAAACTTCTTGTCACCCGTGGTAAGGAGCGAGGCTATCTGACCTATGCCGAGGTCAATGACCATCTGCCGGAAGATAtc                                          >  1:1287789/1‑93 (MQ=255)

                                               ccGCAGTCACAGCTGAAACATCTTGTCCCCCGTGGTAAGGAGCGAGGCTATCTGCCCTATGCCGAGGTCAATGACCATCTGCCGGAAGATAtc                                          <  1:4640860/93‑1 (MQ=255)

                                                 gCAGTCACAGCTGAAACTTCTTGTCACCCGTGGTAAGGAGCGAGGCTATCTGACCTATGCCGAGGTCAATGACCATCTGCCGGAAGATAtcgt                                        >  2:5530195/1‑93 (MQ=255)

                                                 gCAGTCACAGCTGAAACTTCTTGTCACCCGTGGTAAGGAGCGAGGCTATCTGACCTATGCCGAGGTCAATGACCATCTGCCGGAAGATAtcgt                                        <  2:5173722/93‑1 (MQ=255)

                                                 gCAGTCACAGCTGAAACTTCTTGTCACCCGTGGTAAGGAGCGAGGCTATCTGACCTATGCCGAGGTCAATGACCATCTGCCGGAAGATAtcgt                                        >  1:3637110/1‑93 (MQ=255)

                                                    gTCACAGCTGAAACTTCTTGTCACCCGTGGTAAGGAGCGAGGCTATCTGACCTATGCCGAGGTCAATGACCATCTGCCGGAAGATATCGTCGa                                     <  1:6841707/93‑1 (MQ=255)

                                                     tCACAGCTGAAACTTCTTGTCACCCGTGGTAAGGAGCGAGGCTATCTGACCTATGCCGAGGTCAATGACCATCTGCCGGAAGATATCGTCGAt                                    <  1:407707/93‑1 (MQ=255)

                                                      cacaGCTGAAACTTCTTGTCACCCGTGGTAAGGAGCGAGGCTATCTGACCTATGCCGAGGTCAATGACCATCTGCCGGAAGATATCGTCGAtt                                   >  1:5635366/1‑93 (MQ=255)

                                                       acaGCTGAAACTTCTTGTCACCCGTGGTAAGGAGCGAGGCTATCTGACCTATGCCGAGGTCAATGACCATCTGCCGGAAGATATCGTCGATtc                                  <  2:4430036/93‑1 (MQ=255)

                                                       acaGCTGAAACTTCTTGTCACCCGTGGTAAGGAGCGAGGCTATCTGACCTATGCCGAGGTCAATGACCATCTGCCGGAAGATATCGTCGATtc                                  >  2:6963822/1‑93 (MQ=255)

                                                        caGCTGAAACTTCTTGTCACCCGTGGTAAGGAGCGAGGCTATCTGACCTATGCCGAGGTCAATGACCATCTGCCGGAAGATATCGTCGATtca                                 <  1:2544345/93‑1 (MQ=255)

                                                        caGCTGAAACTTCTTGTCACCCGTGGTAAGGAGCGAGGCTATCTGACCTATGCCGAGGTCAATGACCATCTGCCGGAAGATATCGTCGATtca                                 <  1:6609715/93‑1 (MQ=255)

                                                         aGCTGAAACTTCTTGTCACCCGTGGTAAGGAGCGAGGCTATCTGACCTATGCCGAGGTCAATGACCATCTGCCGGAAGATATCGTCGATtcag                                <  2:4348310/93‑1 (MQ=255)

                                                          gCTGAAACTTCTTGTCACCCGTGGTAAGGAGCGAGGCTATCTGACCTATGCCGAGGTCAATGACCATCTGCCGGAAGATATCGTCGTTtcaga                               >  2:5378500/1‑93 (MQ=255)

                                                          gCTGAAACTTCTTGTCACCCGTGGTAAGGAGCGAGGCTATCTGACCTATGCCGAGGTCAATGACCATCTGCCGGAAGATATCGTCGATtcaga                               <  1:525579/93‑1 (MQ=255)

                                                            tGAAACTTCTTGTCACCCGTGGTAAGGAGCGAGGCTATCTGACCTATGCCGAGGTCAATGACCATCTGCCGGAAGATATCGTCGATtcagatc                             >  2:5670953/1‑93 (MQ=255)

                                                            tGAAACTTCTTGTCACCCGTGGTAAGGAGCGAGGCTATCTGACCTATGCCGAGGTCAATGACCATCTGCCGGAAGATATCGTCGATtcagatc                             <  2:885448/93‑1 (MQ=255)

                                                             gAAACTTCTTGTCACCCGTGGTAAGGAGCGATGCTATCTGACCTATGCCGAGGTCAATGACCATCTGCCGGAAGATATCGTCGATtcagatca                            <  1:7399019/93‑1 (MQ=255)

                                                             gAAACTTCTTGTCACCCGTGGTAAGGAGCGAGGCTATCTGACCTATGCCGAGGTCAATGACCATCTGCCGGAAGATATCGTCGATtcagatca                            >  2:3389854/1‑93 (MQ=255)

                                                             gAAACTTCTTGTCACCCGTGGTAAGGAGCGAGGCTATCTGACCTATGCCGAGGTCAATGACCATCTGCCGGAAGATATCGTCGATtcagatca                            <  1:3770019/93‑1 (MQ=255)

                                                             gAAACTTCTTGTCACCCGTGGTAAGGAGCGAGGCTATCTGACCTATGCCGAGGTCAATGACCATCTGCCGGAAGATATCGTCGATtcagatca                            >  1:1110906/1‑93 (MQ=255)

                                                             gAAACTTCTTGTCACCCGTGGTAAGGAGCGAGGCTATCTGACCTATGCCGAGGTCAATGACCATCTGCCGGAAGATATCGTCGATtcagatca                            >  2:5993703/1‑93 (MQ=255)

                                                             gAAACTTCTTGTCACCCGTGGTAAGGAGCGAGGCTATCTGACCTATGCCGAGGTCAATGACCATCTGCCGGAAGATATCGTCGATtcagatca                            <  2:4744479/93‑1 (MQ=255)

                                                               aaCTTCTTGTCACCCGTGGTAAGGAGCGAGGCTATCTGACCTATGCCGAGGTCAATGACCATCTGCCGGAAGATATCGTCGATtcagatcaga                          <  1:2648461/93‑1 (MQ=255)

                                                                aCTTCTTGTCACCCGTGGTAAGGAGCGAGGCTATCTGACCTATGCCGAGGTCAATGACCATCTGCCGGAAGATATCGTCGATTcagatcagat                         <  2:1709905/93‑1 (MQ=255)

                                                                aCTTCTTGTCACCCGTGGTAAGGAGCGAGGCTATCTGACCTATGCCGAGGTCAATGACCATCTGCCGGAAGATATCGTCGATTcagatcagat                         <  2:7294949/93‑1 (MQ=255)

                                                                 cttcttGTCACCCGTGGTAAGGAGCGAGGCTATCTGACCTATGCCGAGGTCAATGACCATCTGCCGGAAGATATCGTCGATTCagatcagatc                        <  2:7083445/93‑1 (MQ=255)

                                                                      tGTCACCCGTGGTAAGGAGCGAGGCTATCTGACCTATGCCGAGGTCAATGACCATCTGCCGGAAGATATCGTCGATTCAGATCAGATCGAAGa                   <  1:2754626/93‑1 (MQ=255)

                                                                       gTCACCCGTGGTAAGGAGCGAGGCTATCTGACCTATGCCGAGGTCAATGACCATCTGCCGGAAGATATCGTCGATTCAGATCAGATCGAAGAc                  <  1:3242026/93‑1 (MQ=255)

                                                                        tCACCCGTGGTAAGGAGCGAGGCTATCTGACCTATGCCGAGGTCAATGACCATCTGCCGGAAGATATCGTCGATTCAGATCAGATCGAAGAca                 <  2:4605748/93‑1 (MQ=255)

                                                                          aCCCGTGGTAAGGAGCGAGGCTATCTGACCTATGCCGAGGTCAATGACCATCTGCCGGAAGATATCGTCGATTCAGATCAGATCGAAGAcatc               >  2:4297071/1‑93 (MQ=255)

                                                                          aCCCGTGGTAAGGAGCGAGGCTATCTGACCTATGCCGAGGTCAATGACCATCTGCCGGAAGATATCGTCGATTCAGATCAGATCGAAGAcatc               <  1:7620581/93‑1 (MQ=255)

                                                                           cccGTGGTAAGGAGCGAGGCTATCTGACCTATGCCGAGGTCAATGACCATCTGCCGGAAGATATCGTCGATTCAGATCAGATCGAAGAcatca              <  2:224046/93‑1 (MQ=255)

                                                                            ccGTGGTAAGGAGCGAGGCTATCTGACCTATGCCGAGGTCAATGACCATCTGCCGGAAGATATCGTCGATTCAGATCAGATCGAAGAcatcat             >  2:4760943/1‑93 (MQ=255)

                                                                             cGTGGTAAGGAGCGAGGCTATCTGACCTATGCCGAGGTCAATGCCCATCTGCCGGAAGATATCGTCGATTCAGATCAGATCGAAGACatcatc            <  1:5429423/93‑1 (MQ=255)

                                                                             cGTGGTAAGGAGCGAGGCTATCTGACCTATGCCGAGGTCAATGACCATCTGCCGGAAGATATCGTCGATTCAGATCAGATCGAAGACatcatc            >  2:6270453/1‑93 (MQ=255)

                                                                              gTGGTAAGGAGCGAGGCTATCTGACCTATGCCGAGGTCAATGACCATCTGCCGGAAGATATCGTCGATTCAGATCAGATCGAAGACATCATcc           >  1:1640614/1‑93 (MQ=255)

                                                                               tGGTAAGGAGCGAGGCTATCTGACCTATGCCGAGGTCAATGACCATCTGCCGGAAGATATCGTCGATTCAGATCAGATCGAAGACATCATCCa          >  2:4487619/1‑93 (MQ=255)

                                                                                 gTAAGGAGCGAGGCTATCTGACCTATGCCGAGGTCAATGACCATCTGCCGGAAGATATCGTCGATTCAGATCAGATCGAAGACATCATCCaaa        <  1:2587485/93‑1 (MQ=255)

                                                                                    aGGAGCGAGGCTATCTGACCTATGCCGAGGTCAATGACCATCTGCCGGAAGATATCGTCGATTCAGATCAGATCGAAGACATCATCCAAATGa     <  1:5986551/93‑1 (MQ=255)

                                                                                    aGGAGCGAGGCTATCTGACCTATGCCGAGGTCAATGACCATCTGCCGGAAGATATCGTCGATTCAGATCAGATCGAAGACATCATCCAAATGa     >  2:4898375/1‑93 (MQ=255)

                                                                                    aGGAGCGAGGCTATCTGACCTATGCCGAGGTCAATGACCATCTGCCGGAAGATATCGTCGATTCAGATCAGATCGAAGACATCATCCAAATGa     >  1:5165407/1‑93 (MQ=255)

                                                                                    aGGAGCGAGGCTATCTGACCTATGCCGAGGTCAATGACCATCTGCCGGAAGATATCGTCGATTCAGATCAGATCGAAGACATCATCCAAATGa     <  2:6419720/93‑1 (MQ=255)

                                                                                     ggAGCGAGGCTATCTGACCTATGCCGAGGTCAATGACCATCTGCCGGAAGATATCGTCGATTCAGATCAGATCGAAGACATCATCCAAATGAt    >  2:2697269/1‑93 (MQ=255)

                                                                                     ggAGCGAGGCTATCTGACCTATGCCGAGGTCAATGACCATCTGCCGGAAGATATCGTCGATTCAGATCAGATCGAAGACATCATCCAAATGAt    <  1:923937/93‑1 (MQ=255)

                                                                                      gAGCGAGGCTATCTGACCTATGCCGAGGTCAATGACCATCTGCCGGAAGATATCGTCGATTCAGATCAGATCGAAGACATCATCCAAATGATc   <  1:4243872/93‑1 (MQ=255)

                                                                                      gAGCGAGGCTATCTGACCTATGCCGAGGTCAATGACCATCTGCCGGAAGATATCGTCGATTCAGATCAGATCGAAGACATCATCCAAATGATc   <  2:6549196/93‑1 (MQ=255)

CACCAACCTCATGAAATAAGTGTGGATACCGTCTTATGGAGCAAAACCCGCAGTCACAGCTGAAACTTCTTGTCACCCGTGGTAAGGAGCAAGGCTATCTGACCTATGCCGAGGTCAATGACCATCTGCCGGAAGATATCGTCGATTCAGATCAGATCGAAGACATCATCCAAATGATCA  >  NC_000913/3210653‑3210832

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 20 ≤` `ATCG/ATCG` `< 29 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`

GATK/CNVnator alignment

BRESEQ :: bam2aln output Only 200 of 205 total aligned reads displayed.

CAACACCAACCTCATGAAATAAGTGTGGATACCGTCTTATGGAGCAAAACCCGCAGTCACAGCTGAAACTTCTTGTCACCCGTGGTAAGGAGCAAGGCTATCTGACCTATGCCGAGGTCAATGACCATCTGCCGGAAGATATCGTCGATTCAGATCAGATCGAAGACATCATCCAAATGATCAACGA  >  NC_000913/3210650‑3210836

CAACACCAACCTCATGAAATAAGTGTGGATACCGTCTTATGGAGCAAAACCCGCAGTCACAGCTGAAACTTCTTGTCACCCGTGGTAAGGAGCG                                                                                               <  SRR4302543.816438/94‑1 (MQ=60)

CAACACCAACCTCATGAAATAAGTGTGGATACCGTCTTATGGAGCAAAACCCGCAGTCACAGCTGAAACTTCTTGTCACCCGTGGTAAGGAGCG                                                                                               >  SRR4302543.2316805/1‑94 (MQ=60)

  ACACCAACCTCATGAAATAAGTGTGGATACCGTCTTATGGAGCAAAACCCGCAGTCACAGCTGAAACTTCTTGTCACCCGTGGTAAGGAGCGAG                                                                                             <  SRR4302543.3656978/94‑1 (MQ=60)

   CACCAACCTCATGAAATAAGTGTGGATACCGTCTTATGGAGCAAAACCCGCAGTCACAGCTGAAACTTCTTGTCACCCGTGGTAAGGAGCGAGG                                                                                            >  SRR4302543.7546431/1‑94 (MQ=60)

   CACCAACCTCATGAAATAAGTGTGGATACCGTCTTATGGAGCAAAACCCGCAGTCACAGCTGAAACTTCTTGTCACCCGTGGTAAGGAGCGAGG                                                                                            >  SRR4302543.638160/1‑94 (MQ=60)

   CACCAACCTCATGAAATAAGTGTGGATACCGTCTTATGGAGCAAAACCCGCAGTCACAGCTGAAACTTCTTGTCACCCGTGGTAAGGAGCGAGG                                                                                            <  SRR4302543.7209648/94‑1 (MQ=60)

    ACCAACCTCATGAAATAAGTGTGGATACCGTCTTATGGAGCAAAACCCGCAGTCACAGCTGAAACTTCTTGTCACCCGTGGTAAGGAGCGAGGC                                                                                           >  SRR4302543.4716160/1‑94 (MQ=60)

    ACCAACCTCATGAAATAAGTGTGGATACCGTCTTATGGAGCAAAACCCGCAGTCACAGCTGAAACTTCTTGTCACCCGTGGTAAGGAGCGAGGC                                                                                           >  SRR4302543.2390007/1‑94 (MQ=60)

     CCAACCTCATGAAATAAGTGTGGATACCGTCTTATGGAGCAAAACCCGCAGTCACAGCTGAAACTTCTTGTCACCCGTGGTAAGGAGCGAGGCT                                                                                          >  SRR4302543.4951264/1‑94 (MQ=60)

     CCAACCTCATGAAATAAGTGTGGATACCGTCTTATGGAGCAAAACCCGCAGTCACAGCTGAAACTTCTTGTCACCCGTGGTAAGGAGCGAGGCT                                                                                          >  SRR4302543.5550487/1‑94 (MQ=60)

      CAACCTCATGAAATAAGTGTGGATACCGTCTTATGGAGCAAAACCCGCAGTCACAGCTGAAACTTCTTGTCACCCGTGGTAAGGAGCGAGGCTA                                                                                         <  SRR4302543.904504/94‑1 (MQ=60)

      CAACCTCATGAAATAAGTGTGGATACCGTCTTATGGAGCAAAACCCGCAGTCACAGCTGAAACTTCTTGTCACCCGTGGTAAGGAGCGAGGCTA                                                                                         >  SRR4302543.1933454/1‑94 (MQ=60)

       AACCTCATGAAATAAGTGTGGATACCGTCTTATGGAGCAAAACCCGCAGTCACAGCTGAAACTTCTTGTCACCCGTGGTAAGGAGCGAGGCTAT                                                                                        >  SRR4302543.425490/1‑94 (MQ=60)

       AACCTCATGAAATAAGTGTGGATACCGTCTTATGGAGCAAAACCCGCAGTCACAGCTGAAACTTCTTGTCACCCGTGGTAAGGAGCGAGGCTAT                                                                                        >  SRR4302543.5769753/1‑94 (MQ=60)

         ccacaaaaaaaaggtgtggataccgtttaatgaaaaaaaccccgaAGTCACAGCTGAAACTTCTTGTCACCCGTGGTAAGGAGCGAGGCTATCT                                                                                      <  SRR4302543.7745082/49‑1 (MQ=60)

          CTCATGAAATAAGTGTGGATACCGTCTTATGGAGCAAAACCCGCAGTCACAGCTGAAACTTCTTGTCACCCGTGGTAAGGAGCGAGGCTATCTG                                                                                     <  SRR4302543.3851815/94‑1 (MQ=60)

          CTCATGAAATAAGTGTGGATACCGTCTTATGGAGCAAAACCCGCAGTCACAGCTGAAACTTCTTGTCACCCGTGGTAAGGAGCGAGGCTATCTG                                                                                     <  SRR4302543.1991295/94‑1 (MQ=60)

            CATGAAATAAGTGTGGATACCGTCTTATGGAGCAAAACCCGCAGTCACAGCTGAAACTTCTTGTCACCCGTGGTAAGGAGCGAGGCTATCTGAC                                                                                   <  SRR4302543.6488923/94‑1 (MQ=60)

            CATGAAATAAGTGTGGATACCGTCTTATGGAGCAAAACCCGCAGTCACAGCTGAAACTTCTTGTCACCCGTGGTAAGGAGCGAGGCTATCTGAC                                                                                   >  SRR4302543.5656448/1‑94 (MQ=60)

            CATGAAATAAGTGTGGATACCGTCTTATGGAGCAAAACCCGCAGTCACAGCTGAAACTTCTTGTCACCCGTGGTAAGGAGCGAGGCTATCTGAC                                                                                   >  SRR4302543.6485615/1‑94 (MQ=60)

            CATGAAATAAGTGTGGATACCGTCTTATGGAGCAAAACCCGCAGTCACAGCTGAAACTTCTTGTCACCCGTGGTAAGGAGCGAGGCTATCTGAC                                                                                   >  SRR4302543.3773969/1‑94 (MQ=60)

            CATGAAATAAGTGTGGATACCGTCTTATGGAGCAAAACCCGCAGTCACAGCTGAAACTTCATGTCACCCGTGGTAAGGAGCGAGGCTATCTGAC                                                                                   >  SRR4302543.7680556/1‑94 (MQ=60)

             ATGAAATAAGTGTGGATACCGTCTTATGGAGCAAAACCCGCAGTCACAGCTGAAACTTCTTGTCACCCGTGGTAAGGAGCGAGGCTATCTGACC                                                                                  >  SRR4302543.7640180/1‑94 (MQ=60)

             ATGAAATAAGTGTGGATACCGTCTTATGGAGCAAAACCCGCAGTCACAGCTGAAACTTCTTGTCACCCGTGGTAAGGAGCGAGGCTATCTGACC                                                                                  >  SRR4302543.7327309/1‑94 (MQ=60)

              TGAAATAAGTGTGGATACCGTCTTATGGAGCAAAACCCGCAGTCACAGCTGAAACTTCTTGTCACCCGTGGTAAGGAGCGAGGCTATCTGACCT                                                                                 <  SRR4302543.3715386/94‑1 (MQ=60)

                AAATAAGTGTGGATACCGTCTTATGGAGCAAAACCCGCAGTCACAGCTGATACTTCTTGTCACCCGTGGTAAGGAGCGAGGCTATCTGACCTAG                                                                               >  SRR4302543.1699330/1‑94 (MQ=60)

                AAATAAGTGTGGATACCGTCTTATGGAGCAAAACCCGCAGTCACAGCTGAAACTTCTTGTCACCCGTGGTAAGGAGCGAGGCTATCTGACCTAT                                                                               >  SRR4302543.3418738/1‑94 (MQ=60)

                AAATAAGTGTGGATACCGTCTTATGGAGCAAAACCCGCAGTCACAGCTGAAACTTCTTGTCACCCGTGGTAAGGAGCGAGGCTATCTGACCTAT                                                                               >  SRR4302543.1796556/1‑94 (MQ=60)

                 AATAAGTGTGGATACCGTCTTATGGAGCAAAACCCGCAGTCACAGCTGAAACTTCTTGTCACCCGTGGTAAGGAGCGAGGCTATCTGACCTATG                                                                              >  SRR4302543.949993/1‑94 (MQ=60)

                 AATAAGTGTGGATACCGTCTTATGGAGCAAAACCCGCAGTCACAGCTGAAACTTCTTGTCACCCGTGGTAAGGAGCGAGGCTATCTGACCTATG                                                                              <  SRR4302543.6368734/94‑1 (MQ=60)

                   TAAGTGTGGATACCGTCTTATGGAGCAAAACCCGCAGTCACAGCTGAAACTTCTTGTCACCCGTGGTAAGGAGCGAGGCTATCTGACCTATGCC                                                                            <  SRR4302543.6388708/94‑1 (MQ=60)

                   TAAGTGTGGATACCGTCTTATGGAGCAAAACCCGCAGTCACAGCTGAAACTTCTTGTCACCCGTGGTAAGGAGCGAGGCTATCTGACCTATGCC                                                                            >  SRR4302543.5509860/1‑94 (MQ=60)

                   TAAGTGTGGATACCGTCTTATGGAGCAAAACCCGCAGTCACAGCTGAAACTTCTTGTCACCCGTGGTAAGGAGCGAGGCTATCTGACCTATGCC                                                                            <  SRR4302543.3941640/94‑1 (MQ=60)

                   TAAGTGTGGATACCGTCTTATGGAGCAAAACCCGCAGTCACAGCTGAAACTTCTTGTCACCCGTGGTAAGGAGCGAGGCTATCTGACCTATGCC                                                                            <  SRR4302543.1089293/94‑1 (MQ=60)

                   TAAGTGTGGATACCGTCTTATGGAGCAAAACCCGCAGTCACAGCTGAAACTTCTTGTCACCCGTGGTAAGGAGCGAGGCTATCTGACCTATGCC                                                                            <  SRR4302543.1089292/94‑1 (MQ=60)

                   TAAGTGTGGATACCGTCTTATGGAGCAAAACCCGCAGTCACAGCTGAAACTTCTTGTCACCCGTGGTAAGGAGCGAGGCTATCTGACCTATGCC                                                                            >  SRR4302543.446504/1‑94 (MQ=60)

                    AAGTGTGGATACCGTCTTATGGAGCAAAACCCGCAGTCACAGCTGAAACTTCTTGTCACCCGTGGTAAGGAGCGAGGCTATCTGACCTATGCCG                                                                           <  SRR4302543.3395104/94‑1 (MQ=60)

                    AAGTGTGGATACCGTCTTATGGAGCAAAACCCGCAGTCACAGCTGAAACTTCTTGTCACCCGTGGTAAGGAGCGAGGCTATCTGACCTATGCCG                                                                           <  SRR4302543.5766903/94‑1 (MQ=60)

                    AAGTGTGGATACCGTCTTATGGAGCAAAACCCGCAGTCACAGCTGAAACTTCTTGTCACCCGTGGTAAGGAGCGAGGCTATCTGACCTATGCCG                                                                           <  SRR4302543.5230294/94‑1 (MQ=60)

                      GTGTGGATACCGTCTTATGGAGCAAAACCCGCATTCACAGCTGAAACTTCTTGTCACCCGTGGTAAGGAGCGAGGCTATCTGACCTATGCCGAG                                                                         <  SRR4302543.4874405/94‑1 (MQ=60)

                      GTGTGGATACCGTCTTATGGAGCAAAACCCGCAGTCACAGCTGAAACTTCTTGTCACCCGTGGTAAGGAGCGAGGCTATCTGACCTATGCCGAG                                                                         <  SRR4302543.4588928/94‑1 (MQ=60)

                      GTGTGGATACCGTCTTATGGAGCAAAACCCGCAGTCACAGCTGAAACTTCTTGTCACCCGTGGTAAGGAGCGAGGCTATCTGACCTATGCCGAG                                                                         <  SRR4302543.2376036/94‑1 (MQ=60)

                      GTGTGGATACCGTCTTATGGAGCAAAACCCGCAGTCACAGCTGAAACTTCTTGTCACCCGTGGTAAGGAGCGAGGCTATCTGACCTATGCCGAG                                                                         <  SRR4302543.206564/94‑1 (MQ=60)

                      GTGTGGATACCGTCTTATGGAGCAAAACCCGCAGTCACAGCTGAAACTTCTTGTCACCCGTGGTAAGGAGCGAGGCTATCTGACCTATGCCGAG                                                                         <  SRR4302543.206565/94‑1 (MQ=60)

                        GTGGATACCGTCTTATGGAGCAAAACCCGCAGTCACAGCTGAAACTTCTTGTCACCCGTGGTAAGGAGCGAGGCTATCTGACCTATGCCGAGGT                                                                       >  SRR4302543.2944751/1‑94 (MQ=60)

                         TGGATACCGTCTTATGGAGCAAAACCCGCAGTCACAGCTGAAACTTCTTGTCACCCGTGGTAAGGAGCGAGGCTATCTGACCTATGCCGAGGTC                                                                      >  SRR4302543.894336/1‑94 (MQ=60)

                         TGGATACCGTCTTATGGAGCAAAACCCGCAGTCACAGCTGAAACTTCTTGTCACCCGTGGTAAGGAGCGAGGCTATCTGACCTATGCCGAGGTC                                                                      >  SRR4302543.5475223/1‑94 (MQ=60)

                          GGATACCGTCTTATGGAGCAAAACCCGCAGTCACAGCTGAAACTTCTTGTCACCCGTGGTAAGGAGCGAGGCTATCTGACCTATGCCGAGGTCA                                                                     <  SRR4302543.5574707/94‑1 (MQ=60)

                           GATACCGTCTTATGGAGCAAAACCCGCAGTCACAGCTGAAACTTCTTGTCACCCGTGGTAAGGAGCGAGGCTATCTGACCTATGCCGAGGTCAA                                                                    >  SRR4302543.5035433/1‑94 (MQ=60)

                            ATACCGTCTTATGGAGCAAAACCCGCAGTCACAGCTGAAACTTCTTGTCACCCGTGGTAAGGAGCGAGGCTATCTGACCTATGCCGAGGTCAAT                                                                   >  SRR4302543.7765457/1‑94 (MQ=60)

                            ATACCGTCTGATGGAGCAAAACCCGCAGTCACAGCTGAAACTTCTTGTCACCCGTGGTAAGGAGCGAGGCTATCTGACCTATGCCGAGGTCAAT                                                                   <  SRR4302543.7347549/94‑1 (MQ=60)

                             TACCGTCTTATGGAGCAAAACCCGCAGTCACAGCTGAAACTTCTTGTCACCCGTGGTAAGGAGCGAGGCTATCTGACCTATGCCGAGGTCAATG                                                                  <  SRR4302543.2647299/94‑1 (MQ=60)

                             TACCGTCTTATGGAGCAAAACCCGCAGTCACAGCTGAAACTTCTTGTCACCCGTGGTAAGGAGCGAGGCTATCTGACCTATGCCGAGGTCAATG                                                                  >  SRR4302543.3368776/1‑94 (MQ=60)

                             TACCGTCTTATGGAGCAAAACCCGCAGTCACAGCTGAAACTTCTTGTCACCCGTGGTAAGGAGCGAGGCTATCTGACCTATGCCGAGGTCAATG                                                                  <  SRR4302543.5538629/94‑1 (MQ=60)

                               CCGTCTTATGGAGCAAAACCCGCAGTCACAGCTGAAACTTCTTGTCACCCGTGGTAAGGAGCGAGGCTATCTGACCTATGCCGAGGTCAATGAC                                                                <  SRR4302543.3889636/94‑1 (MQ=60)

                               CCGTCTTATGGAGCAAAACCCGCAGTCACAGCTGAAACTTCTTGTCACCCGTGGTAAGGAGCGAGGCTATCTGACCTATGCCGAGGTCAATGAC                                                                <  SRR4302543.6802048/94‑1 (MQ=60)

                               CCGTCTTATGGAGCAAAACCCGCAGTCACAGCTGAAACTTCTTGTCACCCGTGGTAAGGAGCGAGGCTATCTGACCTATGCCGAGGTCAATGAC                                                                >  SRR4302543.1706999/1‑94 (MQ=60)

                               CCGTCTTATGGAGCAAAACCCGCAGTCACAGCTGAAACTGCTTGTCACCCGTGGTAAGGAGCGAGGCTATCTGACCTATGCCGAGGTCAATGAC                                                                <  SRR4302543.6044708/94‑1 (MQ=60)

                                CGTCTTATGGAGCAAAACCCGCAGTCACAGCTGAAACTTCTTGTCACCCGTGGTAAGGAGCGAGGCTATCTGACCTATGCCGAGGTCAATGACC                                                               >  SRR4302543.2265010/1‑94 (MQ=60)

                                CGTCTTATGGAGCAAAACCCGCAGTCACAGCTGAAACTTCTTGTCACCCGTGGTAAGGAGCGAGGCTATCTGACCTATGCCGAGGTCAATGACC                                                               <  SRR4302543.3409020/94‑1 (MQ=60)

                                 GTCTTATGGAGCAAAACCCGCAGTCACAGCTGAAACTTCTTGTCACCCGTGGTAAGGAGCGAGGCTATCTGACCTATGCCGAGGTCAATGACCA                                                              >  SRR4302543.7920735/1‑94 (MQ=60)

                                 GTCTTATGGAGCAAAACCCGCAGTCACAGCTGAAACTTCTTGTCACCCGTGGTAAGGAGCGAGGCTATCTGACCTATGCCGAGGTCAATGACCA                                                              >  SRR4302543.3430883/1‑94 (MQ=60)

                                 GTCTTATGGAGCAAAACCCGCAGTCACAGCTGAAACTTCTTGTCACCCGTGGTAAGGAGCGAGGCTATCTGACCTATGCCGAGGTCAATGACCA                                                              >  SRR4302543.3430882/1‑94 (MQ=60)

                                  TCTTATGGAGCAAAACCCGCAGTCACAGCTGAAACTTCTTGTCACCCGTGGTAAGGAGCGAGGCTATCTGACCTATGCCGAGGTCAATGACCAT                                                             <  SRR4302543.5799521/94‑1 (MQ=60)

                                    TTATGGAGCAAAACCCGCAGTCACAGCTGAAACTTCTTGTCACCCGTGGTAAGGAGCGAGGCTATCTGACCTATGCCGAGGTCAATGACCATCT                                                           <  SRR4302543.6702865/94‑1 (MQ=60)

                                    TTATGGAGCAAAACCCGCAGTCACAGCTGAAACTTCTTGTCACCCGTGGTAAGGAGCGAGGCTATCTGACCTATGCCGAGGTCAATGACCATCT                                                           <  SRR4302543.1835360/94‑1 (MQ=60)

                                    TTATGGAGCAAAACCCGCAGTCACAGCTGAAACTTCTTGTCACCCGTGGTAAGGAGCGAGGCTATCTGACCTATGCCGAGGTCAATGACCATCT                                                           <  SRR4302543.5743966/94‑1 (MQ=60)

                                    TTATGGAGCAAAACCCGCAGTCACAGCTGAAACTTCTTGTCACCCGTGGTAAGGAGCGAGGCTATCTGACCTATGCCGAGGTCAATGACCATCT                                                           >  SRR4302543.3109687/1‑94 (MQ=60)

                                     TATGGAGCAAAACCCGCAGTCACAGCTGAAACTTCTTGTCACCCGTGGTAAGGAGCGAGGCTATCTGACCTATGCCGAGGTCAATGACCATCTG                                                          <  SRR4302543.6709446/94‑1 (MQ=60)

                                     TATGGAGCAAAACCCGCAGTCACAGCTGAAACTTCTTGTCACCCGTGGTAAGGAGCGAGGCTATCTGACCTATGCCGAGGTCAATGACCATCTG                                                          <  SRR4302543.960547/94‑1 (MQ=60)

                                     TATGGAGCAAAACCCGCAGTCACAGCTGAAACTTCTTGTCACCCGTGGTAAGGAGCGAGGCTATCTGACCTATGCCGAGGTCAATGACCATCTG                                                          <  SRR4302543.5025543/94‑1 (MQ=60)

                                      ATGGAGCAAAACCCGCAGTCACAGCTGAAACTTCTTGTCACCCGTGGTAAGGAGCGAGGCTATCTGACCTATGCCGAGGTCAATGACCATCTGC                                                         <  SRR4302543.7795795/94‑1 (MQ=60)

                                      ATGGAGCAAAACCCGCAGTCACAGCTGAAACTTCTTGTCACCCGTGGTAAGGAGCGAGGCTATCTGACCTATGCCGAGGTCAATGACCATCTGC                                                         >  SRR4302543.416407/1‑94 (MQ=60)

                                      ATGGAGCAAAACCCGCAGTCACAGCTGAAACTTCTTGTCACCCGTGGTAAGGAGCGAGGCTATCTGACCTATGCCGAGGTCAATGACCATCTGC                                                         <  SRR4302543.3646663/94‑1 (MQ=60)

                                      ATGGAGCAAAACCCGCAGTCACAGCTGAAACTTCTTGTCACCCGTGGTAAGGAGCGAGGCTATCTGACCTATGCCGAGGTCAATGACCATCTGC                                                         <  SRR4302543.655182/94‑1 (MQ=60)

                                       TGGAGCAAAACCCGCAGTCACAGCTGAAACTTCTTGTCACCCGTGGTAAGGAGCGAGGCTATCTGACCTATGCCGAGGTCAATGACCATCTGCC                                                        <  SRR4302543.775209/94‑1 (MQ=60)

                                        GGAGCAAAACCCGCAGTCACAGCTGAAACTTCTTGTCACCCGTGGTAAGGAGCGAGGCTATCTGACCTATGCCGAGGTCAATGACCATCTGCCG                                                       >  SRR4302543.7040698/1‑94 (MQ=60)

                                        GGAGCAAAACCCGCAGTCACAGCTGAAACTTCTTGTCACCCGTGGTAAGGAGCGAGGCTATCTGACCTATGCCGAGGTCAATGACCATCTGCCG                                                       <  SRR4302543.1483773/94‑1 (MQ=60)

                                        GGAGCAAAACCCGCAGTCACAGCTGAAACTTCTTGTCACCCGTGGTAAGGAGCGAGGCTATCTGACCTATGCCGAGGTCAATGACCATCTGCCG                                                       <  SRR4302543.4833104/94‑1 (MQ=60)

                                        GGAGCAAAACCCGCAGTCACAGCTGAAACTTCTTGTCACCCGTGGTAAGGAGCGAGGCTATCTGACCTATGCCGAGGTCAATGACCATCTGCCG                                                       <  SRR4302543.6582661/94‑1 (MQ=60)

                                         GAGCAAAACCCGCAGTCACAGCTGAAACTTCTTGTCACCCGTGGTAAGGAGCGAGGCTATCTGACCTATGCCGAGGTCAATGACCATCTGCCGG                                                      >  SRR4302543.6180647/1‑94 (MQ=60)

                                          AGCAAAACCCGCAGTCACAGCTGAAACTTCTTGTCACCCGTGGTAAGGAGCGAGGCTATCTGACCTATGCCGAGGTCAATGACCATCTGCCGGA                                                     <  SRR4302543.98327/94‑1 (MQ=60)

                                          AGCAAAACCCGCAGTCACAGCTGAAACTTCTTGTCACCCGTGGTAAGGAGCGAGGCTATCTGACCTATGCCGAGGGCAATGACCATCTGCCGGA                                                     >  SRR4302543.5799718/1‑94 (MQ=60)

                                           GCAAAACCCGCAGTCACAGCTGAAACTTCTTGTCACCCGTGGTAAGGAGCGAGGCTATCTGACCTATGCCGAGGTCAATGACCATCTGCCGGAA                                                    <  SRR4302543.2166198/94‑1 (MQ=60)

                                            CAAAACCCGCAGTCACAGCTGAAACTTCTTGTCACCCGTGGTAAGGAGCGAGGCTATCTGACCTATGCCGAGGTCAATGACCATCTGCCGGAAG                                                   <  SRR4302543.6018109/94‑1 (MQ=60)

                                            CAAAACCCGCAGTCACAGCTGAAACTTCTTGTCACCCGTGGTAAGGAGCGAGGCTATCTGACCTATGCCGAGGTCAATGACCATCTGCCGGAAG                                                   <  SRR4302543.7206977/94‑1 (MQ=60)

                                            CAAAACCCGCAGTCACAGCTGAAACTTCTTGTCACCCGTGGTAAGGAGCGAGGCTATCTGACCTATGCCGAGGTCAATGACCATCTGCCGGAAG                                                   >  SRR4302543.3712031/1‑94 (MQ=60)

                                            CAAAACCCGCAGTCACAGCTGAAACTTCTTGTCACCCGTGGTAAGGAGCGAGGCTATCTGACCTATGCCGAGGTCAATGACCATCTGCCGGAAG                                                   >  SRR4302543.2912985/1‑94 (MQ=60)

                                            CAAAACCCGCAGTCACAGCTGAAACTTCTTGTCACCCGTGGTAAGGAGCGAGGCTATCTGACCTATGCCGAGGTCAATGACCATCTGCCGGAAG                                                   <  SRR4302543.552331/94‑1 (MQ=60)

                                            CAAAACCCGCAGTCACAGCTGAAACTTCTTGTCACCCGTGGTAAGGAGCGAGGCTATCTGACCTATGCCGAGGTCAATGACCATCTGCCGGAAG                                                   >  SRR4302543.760279/1‑94 (MQ=60)

                                            CAAAACCCGCAGTCACAGCTGAAACTTCTTGTCACCCGTGGTAAGGAGCGAGGCTATCTGACCTATACCGAGGTCAATGACCATCTGCCGGAga                                                   >  SRR4302543.5434783/1‑92 (MQ=60)

                                             AAAACCCGCAGTCACAGCTGAAACTTCTTGTCACCCGTGGTAAGGAGCGAGGCTATCTGACCTATGCCGAGGTCAATGACCATCTGCCGGAAGA                                                  >  SRR4302543.500902/1‑94 (MQ=60)

                                             AAAACCCGCAGTCACAGCTGAAACTTCTTGTCACCCGTGGTAAGGAGCGAGGCTATCTGACCTATGCCGAGGTCAATGACCATCTGCCGGAAGA                                                  <  SRR4302543.4374908/94‑1 (MQ=60)

                                              AAACCCGCAGTCACAGCTGAAACTTCTTGTCACCCGTGGTAAGGAGCGAGGCTATCTGACCTATGCCGAGGTCAATGACCATCTGCCGGAAGAT                                                 >  SRR4302543.5792033/1‑94 (MQ=60)

                                              AAACCCGCAGTCACAGCTGAAACTTCTTGTCACCCGTGGTAAGGAGCGAGGCTATCTGACCTATGCCGAGGTCAATGACCATCTGCCGGAAGAT                                                 <  SRR4302543.529814/94‑1 (MQ=60)

                                              AAACCCGCAGTCACAGCTGAAACTTCTTGTCACCCGTGGTAAGGAGCGAGGCTATCTGACCTATGCCGAGGTCAATGACCATCTGCCGGAAGAT                                                 >  SRR4302543.7653940/1‑94 (MQ=60)

                                               AACCCGCAGTCACAGCTGAAACTTCTTGTCACCCGTGGTAAGGAGCGAGGCTATCTGACCTATGCCGAGGTCAATGACCATCTGCCGGAAGATA                                                <  SRR4302543.3745970/94‑1 (MQ=60)

                                               AACCCGCAGTCACAGCTGAAACTTCTTGTCACCCGTGGTAAGGAGCGAGGCTATCTGACCTATGCCGAGGTCAATGACCATCTGCCGGAAGATA                                                >  SRR4302543.2775493/1‑94 (MQ=60)

                                                ACCCGCAGTCACAGCTGAAACTTCTTGTCACCCGTGGTAAGGAGCGAGGCTATCTGACCTATGCCGAGGTCAATGACCATCTGCCGGAAGATAT                                               <  SRR4302543.5781057/94‑1 (MQ=60)

                                                ACCCGCAGTCACAGCTGAAACTTCTTGTCACCCGTGGTAAGGAGCGAGGCTATCTGACCTATGCCGAGGTCAATGACCATCTGCCGGAAGATAT                                               <  SRR4302543.6163759/94‑1 (MQ=60)

                                                ACCCGCAGTCACAGCTGAAACTTCTTGTCACCCGTGGTAAGGAGCGAGGCTATCTGACCTATGCCGAGGTCAATGACCATCTGCCGGAAGATAT                                               <  SRR4302543.101045/94‑1 (MQ=60)

                                                 CCCGCAGTCACAGCTGAAACTTCTTGTCACCCGTGGTAAGGAGCGAGGCTATCTGACCTATGCCGAGGTCAATGACCATCTGCCGGAAGATATC                                              <  SRR4302543.1743166/94‑1 (MQ=60)

                                                 CCCGCAGTCACAGCTGAAACTTCTTGTCACCCGTGGTAAGGAGCGAGGCTATCTGACCTATGCCGAGGTCAATGACCATCTGCCGGAAGATATC                                              <  SRR4302543.4149372/94‑1 (MQ=60)

                                                 CCCGCAGTCACAGCTGAAACTTCTTGTCACCCGTGGTAAGGAGCGAGGCTATCTGACCTATGCCGAGGTCAATGACCATCTGCCGGAAGATATC                                              <  SRR4302543.130568/94‑1 (MQ=60)

                                                 CCCGCAGTCACAGCTGAAACTTCTTGTCACCCGTGGTAAGGAGCGAGGCTATCTGACCTATGCCGAGGTCAATGACCATCTGCCGGAAGATATC                                              >  SRR4302543.1299265/1‑94 (MQ=60)

                                                  CCGCAGTCACAGCTGAAACTTCTTGTCACCCGTGGTAAGGAGCGAGGCTATCTGACCTATGCCGAGGTCAATGACCATCTGCCGGAAGATATCG                                             <  SRR4302543.3723220/94‑1 (MQ=60)

                                                  CCGCAGTCACAGCTGAAACTTCTTGTCACCCGTGGTAAGGAGCGAGGCTATCTGACCTATGCCGAGGTCAATGACCATCTGCCGGAAGATATCG                                             >  SRR4302543.4873485/1‑94 (MQ=60)

                                                  CCGCAGTCACAGCTGAAACTTCTTGTCACCCGTAGTAAGGAGCGAGGCTATCTGACCTATGCCGAGGTCAATGACCATCTGCCGGAAGATATCG                                             <  SRR4302543.7674148/94‑1 (MQ=60)

                                                  CCGCAGTCACAGCTGAAACATCTTGTCCCCCGTGGTAAGGAGCGAGGCTATCTGCCCTATGCCGAGGTCAATGACCATCTGCCGGAAGATATCG                                             <  SRR4302543.4683073/94‑1 (MQ=60)

                                                   CGCAGTCACAGCTGAAACTTCTTGTCACCCGTGGTAAGGAGCGAGGCTATCTGACCTATGCCGAGGTCAATGACCATCTGCCGGAAGATATCGT                                            >  SRR4302543.3669123/1‑94 (MQ=60)

                                                   CGCAGTCACAGCTGAAACTTCTTGTCACCCGTGGTAAGGAGCGAGGCTATCTGACCTATGCCGAGGTCAATGACCATCTGCCGGAAGATATCGT                                            <  SRR4302543.2085171/94‑1 (MQ=60)

                                                    GCAGTCACAGCTGAAACTTCTTGTCACCCGTGGTAAGGAGCGAGGCTATCTGACCTATGCCGAGGTCAATCACCATCTGCCGGAAGATATCGTC                                           >  SRR4302543.1088079/1‑94 (MQ=60)

                                                     CAGTCACAGCTGAAACTTCTTGTCACCCGTGGTAAGGAGCGAGGCTATCTGACCTATGCCGAGGTCAATGACCATCTGCCGGAAGATATCGTCG                                          <  SRR4302543.6724284/94‑1 (MQ=60)

                                                      AGTCACAGCTGAAACTTCTTGTCACCCGTGGTAAGGAGCGAGGCTATCTGACCTATGCCGAGGTCAATGACCATCTGCCGGAAGATATCGTCGA                                         >  SRR4302543.4341687/1‑94 (MQ=60)

                                                       GTCACGGCTGAAACTTCTTGTCACCCGTGGTAAGGAGCGAGGCTATCTGACCTATGCCGAGGTCAATGACCATCTG‑CGGAAGATATCGTCGATT                                       >  SRR4302543.2408764/1‑94 (MQ=60)

                                                       GTCACAGCTGAAACTTCTTGTCACCCGTGGTAAGGAGCGAGGCTATCTGACCTATGCCGAGGTCAATGACCATCTGCCGGAAGATATCGTCGAT                                        >  SRR4302543.1160861/1‑94 (MQ=60)

                                                       GTCACAGCTGAAACTTCTTGTCACCCGTGGTAAGGAGCGAGGCTATCTGACCTATGCCGAGGTCAATGACCATCTGCCGGAAGATATCGTCGAT                                        <  SRR4302543.1397581/94‑1 (MQ=60)

                                                       GTCACAGCTGAAACTTCTTGTCACCCGTGGTAAGGAGCGAGGCTATCTGACCTATGCCGAGGTCAATGACCATCTGCCGGAAGATATCGTCGAT                                        >  SRR4302543.1762929/1‑94 (MQ=60)

                                                       GTCACAGCTGAAACTTCTTGTCACCCGTGGTAAGGAGCGAGGCTATCTGACCTATGCCGAGGTCAATGACCATCTGCCGGAAGATATCGTCGAT                                        <  SRR4302543.3200949/94‑1 (MQ=60)

                                                       GTCACAGCTGAAACTTCTTGTCACCCGTGGTAAGGAGCGAGGCTATCTGACCTATGCCGAGGTCAATGACCATCTGCCGGAAGATATCGTCGAT                                        >  SRR4302543.2713191/1‑94 (MQ=60)

                                                       GTCACAGCTGAAACTTCTTGTCACCCGTGGTAAGGAGCGAGGCTATCTGACCTATGCCGAGGTCAATGACCATCTGCCGGAAGATATCGTCGAT                                        <  SRR4302543.5436210/94‑1 (MQ=60)

                                                       GTCACAGCTGAAACTTCTTGTCACCCGTGGTAAGGAGCGAGGCTATCTGACCTATGCCGAGGTCAATGACCATCTGCCGGAAGATATCGTCGAT                                        <  SRR4302543.6906279/94‑1 (MQ=60)

                                                       GTCACAGCTGAAACTTCTTGTCACCCGTGGTAAGGAGCGAGGCTATCTGACCTATGCCGAGGTCAATGACCATCTGCCGGAAGATATCGTCGAT                                        <  SRR4302543.382143/94‑1 (MQ=60)

                                                        TCACAGCTGAAACTTCTTGTCACCCGTGGTAAGGAGCGAGGCTATCTGACCTATGCCGAGGTCAATGACCATCTGCCGGAAGATATCGTCGATT                                       <  SRR4302543.411467/94‑1 (MQ=60)

                                                        TCACAGCTGAAACTTCTTGTCACCCGTGGTAAGGAGCGAGGCTATCTGACCTATGCCGAGGTCAATGACCATCTGCCGGAAGATATCGTCGATT                                       >  SRR4302543.5686729/1‑94 (MQ=60)

                                                           cagcggaacctgctgggccCCCGTGGTAAGGAGCGAGGCTATCTGACCTATGGCGAGGTCAATGACCATCTGCCGGAAGATATCGTCGATTCAG                                    <  SRR4302543.6672010/75‑1 (MQ=60)

                                                           CAGCTGAAACTTCTTGTCACCCGTGGTAAGGAGCGAGGCTATCTGACCTATGCCGAGGTCAATGACCATCTGCCGGAAGATATCGTCGATTCAG                                    <  SRR4302543.2567551/94‑1 (MQ=60)

                                                           CAGCTGAAACTTCTTGTCACCCGTGGTAAGGAGCGAGGCTATCTGACCTATGCCGAGGTCAATGACCATCTGCCGGAAGATATCGTCGATTCAG                                    <  SRR4302543.2567552/94‑1 (MQ=60)

                                                           CAGCTGAAACTTCTTGTCACCCGTGGTAAGGAGCGAGGCTATCTGACCTATGCCGAGGTCAATGACCATCTGCCGGAAGATATCGTCGATTCAG                                    <  SRR4302543.6672012/94‑1 (MQ=60)

                                                            AGCTGAAACTTCTTGTCACCCGTGGTAAGGAGCGAGGCTATCTGACCTATGCCGAGGTCAATGACCATCTGCCGGAAGATATCGTCGATTCAGA                                   >  SRR4302543.315164/1‑94 (MQ=60)

                                                             GCTGAAACTTCTTGTCACCCGTGGTAAGGAGCGAGGCTATCTGACCTATGCCGAGGTCAATGACCATCTGCCGGAAGATATCGTCGATTCAGAT                                  <  SRR4302543.530439/94‑1 (MQ=60)

                                                             GCTGAAACTTCTTGTCACCCGTGGTAAGGAGCGAGGCTATCTGACCTATGCCGAGGTCAATGACCATCTGCCGGAAGATATCGTCGATTCAGAT                                  <  SRR4302543.530438/94‑1 (MQ=60)

                                                             GCTGAAACTTCTTGTCACCCGTGGTAAGGAGCGAGGCTATCTGACCTATGCCGAGGTCAATGACCATCTGCCGGAAGATATCGTCGATTCAGAT                                  >  SRR4302543.3276272/1‑94 (MQ=60)

                                                              CTGAAACTTCTTGTCACCCGTGGTAAGGAGCGAGGCTATCTGACCTATGCCGAGGTCAATGACCATCTGCCGGAAGATATCGTCGATTCAGATC                                 >  SRR4302543.3230395/1‑94 (MQ=60)

                                                               TGAAACTTCTTGTCACCCGTGGTAAGGAGCGAGGCTATCTGACCTATGCCGAGGTCAATGACCATCTGCCGGAAGATATCGTCGATTCAGATCA                                >  SRR4302543.6542140/1‑94 (MQ=60)

                                                               TGAAACTTCTTGTCACCCGTGGTAAGGAGCGAGGCTATCTGACCTATGCCGAGGTCAATGACCATCTGCCGGAAGATATCGTCGATTCAGATCA                                >  SRR4302543.1120934/1‑94 (MQ=60)

                                                               TGAAACTTCTTGTCACCCGTGGTAAGGAGCGAGGCTATCTGACCTATGCCGAGGTCAATGACCATCTGCCGGAAGATATCGTCGATTCAGATCA                                >  SRR4302543.4014892/1‑94 (MQ=60)

                                                               TGAAACTTCTTGTCACCCGTGGTAAGGAGCGAGGCTATCTGACCTATGCCGAGGTCAATGACCATCTGCCGGAAGATATCGTCGATTCAGATCA                                >  SRR4302543.1120932/1‑94 (MQ=60)

                                                               TGAAACTTCTTGTCACCCGTGGTAAGGAGCGAGGCTATCTGACCTATGCCGAGGTCAATGACCATCTGCCGGAAGATATCGTCGATTCAGATCA                                <  SRR4302543.7117596/94‑1 (MQ=60)

                                                                GAAACTTCTTGTCACCCGTGGTAAGGAGCGATGCTATCTGACCTATGCCGAGGTCAATGACCATCTGCCGGAAGATATCGTCGATTCAGATCAG                               <  SRR4302543.7470061/94‑1 (MQ=60)

                                                                GAAACTTCTTGTCACCCGTGGTAAGGAGCGAGGCTATCTGACCTATGCCGAGGTCAATGACCATCTGCCGGAAGATATCGTCGATTCAGATCAG                               >  SRR4302543.1282101/1‑94 (MQ=60)

                                                                GAAACTTCTTGTCACCCGTGGTAAGGAGCGAGGCTATCTGACCTATGCCGAGGTCAATGACCATCTGCCGGAAGATATCGTCGATTCAGATCAG                               <  SRR4302543.3803212/94‑1 (MQ=60)

                                                                GAAACTTCTTGTCACCCGTGGTAAGGAGCGAGGCTATCTGACCTATGCCGAGGTCAATGACCATCTGCCGGAAGATATCGTCGATTCAGATCAG                               >  SRR4302543.7512640/1‑94 (MQ=60)

                                                                GAAACTTCTTGTCACCCGTGGTAAGGAGCGAGGCTATCTGACCTATGCCGAGGTCAATGACCATCTGCCGGAAGATATCGTCGATTCAGATCAG                               >  SRR4302543.4703955/1‑94 (MQ=60)

                                                                 AAACTTCTTGTCACCCGTGGTAAGGAGCGAGGCTATCTGACCTATGCCGAGGTCAATGACCATCTGCCGGAAGATATCGTCGATTCAGATCAGA                              <  SRR4302543.1034078/94‑1 (MQ=60)

                                                                  AACTTCTTGTCACCCGTGGTAAGGAGCGAGGCTATCTGACCTATGCCGAGGTCAATGACCATCTGCCGGAAGATATCGTCGATTCAGATCAGAT                             <  SRR4302543.1899213/94‑1 (MQ=60)

                                                                  AACTTCTTGTCACCCGTGGTAAGGAGCGAGGCTATCTGACCTATGCCGAGGTCAATGACCATCTGCCGGAAGATATCGTCGATTCAGATCAGAT                             <  SRR4302543.2672465/94‑1 (MQ=60)

                                                                  AACTTCTTGTCACCCGTGGTAAGGAGCGAGGCTATCTGACCTATGCCGAGGTCAATGACCATCTGCCGGAAGATATCGTCGATTCAGATCAGAT                             <  SRR4302543.2770635/94‑1 (MQ=60)

                                                                  AACTTCTTGTCACCCGTGGTAAGGAGCGAGGCTATCTGACCTATGCCGAGGTCAATGACCATCTGCCGGAAGATATCGTCGATTCAGATCAGAT                             >  SRR4302543.2887154/1‑94 (MQ=60)

                                                                  AACTTCTTGTCACCCGTGGTAAGGAGCGAGGCTATCTGACCTATGCCGAGGTCAATGACCATCTGCCGGAAGATATCGTCGATTCAGATCAGAT                             <  SRR4302543.7145956/94‑1 (MQ=60)

                                                                   ACTTCTTGTCACCCGTGGTAAGGAGCGAGGCTATCTGACCTATGCCGAGGTCAATGACCATCTGCCGGAAGATATCGTCGATTCAGATCAGATC                            <  SRR4302543.3969576/94‑1 (MQ=60)

                                                                   ACTTCTTGTCACCCGTGGTAAGGAGCGAGGCTATCTGACCTATGCCGAGGTCAATGACCATCTGCCGGAAGATATCGTCGATTCAGATCAGATC                            <  SRR4302543.4611481/94‑1 (MQ=60)

                                                                    CTTCTTGTCACCCGTGGTAAGGAGCGAGGCTATCTGACCTATGCCGAGGTCAATGACCATCTGCCGGAAGATATCGTCGATTCAGATCAGATCG                           >  SRR4302543.2136825/1‑94 (MQ=60)

                                                                    CTTCTTGTCACCCGTGGTAAGGAGCGAGGCTATCTGACCTATGCCGAGGTCAATGACCATCTGCCGGAAGATATCGTCGATTCAGATCAGATCG                           >  SRR4302543.3522568/1‑94 (MQ=60)

                                                                     TTCTTGTCACCCGTGGTAAGGAGCGAGGCTATCTGACCTATGCCGAGGTCAATGACCATCTGCCGGAAGATATCGTCGATTCAGATCAGATCGA                          <  SRR4302543.3705902/94‑1 (MQ=60)

                                                                         TGTCACCCGTGGTAAGGAGCGAGGCTATCTGACCTATGCCGAGGTCAATGACCATCTGCCGGAAGATATCGTCGATTCAGATCAGATCGAAGAC                      <  SRR4302543.2779685/94‑1 (MQ=60)

                                                                          TTCACCCGTGGTAAGGAGCGAGGCTATCTGACCTATGCCGAGGTCAATGACCATCTGCCGGAAGATATCGTCGATTCAGATCAGATCGAAGACA                     <  SRR4302543.556576/94‑1 (MQ=60)

                                                                          GTCACCCGTGGTAAGGAGCGAGGCTATCTGACCTATGCCGAGGTCAATGACCATCTGCCGGAAGATATCGTCGATTCAGATCAGATCGAAGACA                     <  SRR4302543.3271348/94‑1 (MQ=60)

                                                                            CACCCGTGGTAAGGAGCGAGGCTATCTGACCTATGCCGAGGTCAATGACCATCTGCCGGAAGATATCGTCGATTCAGATCAGATCGAAGACATC                   >  SRR4302543.6079045/1‑94 (MQ=60)

                                                                            CACCCGTGGTAAGGAGCGAGGCTATCTGACCTATGCCGAGGTCAATGACCATCTGCCGGAAGATATCGTCGATTCAGATCAGATCGAAGACATC                   >  SRR4302543.5370755/1‑94 (MQ=60)

                                                                            CACCCGTGGTAAGGAGCGAGGCTATCTGACCTATGCCGAGGTCAATGACCATCTGCCGGAAGATATCGTCGATTCAGATCAGATCGAAGACACC                   >  SRR4302543.6079044/1‑94 (MQ=60)

                                                                             ACCCGTGGTAAGGAGCGAGGCTATCTGACCTATGCCGAGGTCAATGACCATCTGCCGGAAGATATCGTCGATTCAGATCAGATCGAAGACATCA                  <  SRR4302543.769834/94‑1 (MQ=60)

                                                                             ACCCGTGGTAAGGAGCGAGGCTATCTGACCTATGCCGAGGTCAATGACCATCTGCCGGAAGATATCGTCGATTCAGATCAGATCGAAGACATCA                  <  SRR4302543.7692905/94‑1 (MQ=60)

                                                                              CCCGTGGTAAGGAGCGAGGCTATCTGACCTATGCCGAGGTCAATGACCATCTGCCGGAAGATATCGTCGATTCAGATCAGATCGAAGACATCAT                 >  SRR4302543.4316282/1‑94 (MQ=60)

                                                                              CCCGTGGTAAGGAGCGAGGCTATCTGACCTATGCCGAGGTCAATGACCATCTGCCGGAAGATATCGTCGATTCAGATCAGATCGAAGACATCAT                 >  SRR4302543.7560941/1‑94 (MQ=60)

                                                                               CCGTGGTAAGGAGCGAGGCTATCTGACCTATGCCGAGGTCAATGACCATCTGCCGGAAGATATCGTCGATTCAGATCAGATCGAAGACATCATC                >  SRR4302543.6601889/1‑94 (MQ=60)

                                                                               CCGTGGTAAGGAGCGAGGCTATCTGACCTATGCCGAGGTCAATGACCATCTGCCGGAAGATATCGTCGATTCAGATCAGATCGAAGACATCATC                <  SRR4302543.2395182/94‑1 (MQ=60)

                                                                                CGTGGTAAGGAGCGAGGCTATCTGACCTATGCCGAGGTCAATGCCCATCTGCCGGAAGATATCGTCGATTCAGATCAGATCGAAGACATCATCC               <  SRR4302543.5478759/94‑1 (MQ=60)

                                                                                CGTGGTAAGGAGCGAGGCTATCTGACCTATGCCGAGGTCAATGACCATCTGCCGGAAGATATCGTCGATTCAGATCAGATCGAAGACATCATCC               >  SRR4302543.1655252/1‑94 (MQ=60)

                                                                                CGTGGTAAGGAGCGAGGCTATCTGACCTATGCCGAGGTCAATGACCATCTGCCGGAAGATATCGTCGATTCAGATCAGATCGAAGACATCATCC               >  SRR4302543.502276/1‑94 (MQ=60)

                                                                                CGTGGTAAGGAGCGAGGCTATCTGACCTATGCCGAGGTCAATGACCATCTGCCGGAAGATATCGTCGATTCAGATCAGATCGAAGACATCATCC               >  SRR4302543.7678194/1‑94 (MQ=60)

                                                                                 GTGGTAAGGAGCGAGGCTATCTGACCTATGCCGAGGTCAATGACCATCTGCCGGAAGATATCGTCGATTCAGATCAGATCGAAGACATCATCCA              >  SRR4302543.110769/1‑94 (MQ=60)

                                                                                 GTGGTAAGGAGCGAGGCTATCTGACCTATGCCGAGGTCAATGACCATCTGCCGGAAGATATCGTCGATTCAGATCAGATCGAAGACATCATCCA              >  SRR4302543.2657581/1‑94 (MQ=60)

                                                                                  TGGTAAGGAGCGAGGCTATCTGACCTATGCCGAGGTCAATGACCATCTGCCGGAAGATATCGTCGATTCAGATCAGATCGAAGACATCATCCAA             >  SRR4302543.2618797/1‑94 (MQ=60)

                                                                                   GGTAAGGAGCGAGGCTATCTGACCTATGCCGAGGTCAATGACCATCTGCCGGAAGATATCGTCGATTCAGATCAGATCGAAGACATCATCCAAA            <  SRR4302543.4340037/94‑1 (MQ=60)

                                                                                   GGTAAGGAGCGAGGCTATCTGACCTATGCCGAGGTCAATGACCATCTGCCGGAAGATATCGTCGATTCAGATCAGATCGAAGACATCATCCAAA            >  SRR4302543.2572685/1‑94 (MQ=60)

                                                                                   GGTAAGGAGCGAGGCTATCTGACCTATGCCGAGGTCAATGACCATCTGCCGGAAGATATCGTCGATTCAGATCAGATCGAAGACATCATCCAAA            <  SRR4302543.5743292/94‑1 (MQ=60)

                                                                                    GTAAGGAGCGAGGCTATCTGACCTATGCCGAGGTCAATGACCATCTGCCGGAAGATATCGTCGATTCAGATCAGATCGAAGACATCATCCAAAT           <  SRR4302543.2611016/94‑1 (MQ=60)

                                                                                    GTAAGGAGCGAGGCTATCTGACCTATGCCGAGGTCAATGACCATCTGCCGGAAGATATCGTCGATTCAGATCAGATCGAAGACATCATCCAAAT           <  SRR4302543.6894070/94‑1 (MQ=60)

                                                                                    GTAAGGAGCGAGGCTATCTGACCTATGCCGAGGTCAATGACCATCTGCCGGAAGATATCGTCGATTCAGATCAGATCGAAGACATCATCCAAAT           <  SRR4302543.3481114/94‑1 (MQ=60)

                                                                                    GTAAGGAGCGAGGCTATCTGACCTATGCCGAGGTCAATGACCATCTGCCGGAAGATATCGTCGATTCAGATCAGATCGAAGACATCATCCAAAT           <  SRR4302543.5860182/94‑1 (MQ=60)

                                                                                     TAAGGAGCGTGGCTATCTGACCTATGCCGAGGTCAATGACCATCTGCCGGAAGATATCGTCGATTCAGATCAGATCGAAGACATCATCCAAATG          <  SRR4302543.2354694/94‑1 (MQ=60)

                                                                                      AAGGAGCGAGGCTATCTGACCTATGCCGAGGTCAATGACCATCTGCCGGAAGATATCGTCGATTCAGATCAGATCGAAGACATCATCCAAATGA         >  SRR4302543.5212073/1‑94 (MQ=60)

                                                                                       AGGAGCGAGGCTATCTGACCTATGCCGAGGTCAATGACCATCTGCCGGAAGATATCGTCGATTCAGATCAGATCGAAGACATCATCCAAATGAT        <  SRR4302543.6041407/94‑1 (MQ=60)

                                                                                       AGGAGCGAGGCTATCTGACCTATGCCGAGGTCAATGACCATCTGCCGGAAGATATCGTCGATTCAGATCAGATCGAAGACATCATCCAAATGAT        >  SRR4302543.1685799/1‑94 (MQ=60)

                                                                                        GGAGCGAGGCTATCTGACCTATGCCGAGGTCAATGACCATCTGCCGGAAGATATCGTCGATTCAGATCAGATCGAAGACATCATCCAAATGATC       <  SRR4302543.932022/94‑1 (MQ=60)

                                                                                        GGAGCGAGGCTATCTGACCTATGCCGAGGTCAATGACCATCTGCCGGAAGATATCGTCGATTCAGATCAGATCGAAGACATCATCCAAATGATC       <  SRR4302543.932021/94‑1 (MQ=60)

                                                                                         GAGCGAGGCTATCTGACCTATGCCGAGGTCAATGACCATCTGCCGGAAGATATCGTCGATTCAGATCAGATCGAAGACATCATCCAAATGATCA      >  SRR4302543.1131671/1‑94 (MQ=60)

                                                                                         GAGCGAGGCTATCTGACCTATGCCGAGGTCAATGACCATCTGCCGGAAGATATCGTCGATTCAGATCAGATCGAAGACATCATCCAAATGATCA      <  SRR4302543.4282382/94‑1 (MQ=60)

                                                                                          AGCGAGGCTATCTGACCTATGCCGAGGTCAATGACCATCTGCCGGAAGATATCGTCGATTCAGATCAGATCGAAGACATCATCCAAATGATCAA     >  SRR4302543.1968845/1‑94 (MQ=60)

                                                                                          AGCGAGGCTATCTGACCTATGCCGAGGTCAATGACCATCTGCCGGAAGATATCGTCGATTCAGATCAGATCGAAGACATCATCCAAATGATCAA     >  SRR4302543.518628/1‑94 (MQ=60)

                                                                                          AGCGAGGCTATCTGACCTATGCCGAGGTCAATGACCATCTGCCGGAAGATATCGTCGATTCAGATCAGATCGAAGACATCATCCAAATGATCAA     <  SRR4302543.5240136/94‑1 (MQ=60)

                                                                                          AGCGAGGCTATCTGACCTATGCCGAGGTCAATGACCATCTGCCGGAAGATATCGTCGATTCAGATCAGATCGAAGACATCATCCAAATGATCAA     <  SRR4302543.7621662/94‑1 (MQ=60)

                                                                                           GCGAGGCTATCTTACCTATGCCGAGGTCAATGACCATCTGCCGGAAGATATCGTCGATTCAGATCAGATCGAAGACATCATCCAAATGATCAAC    <  SRR4302543.2692845/94‑1 (MQ=60)

                                                                                           GCGAGGCTATCTGACCTATGCCGAGGTCAATGACCATCTGCCGGAAGATATCGTCGATTCAGATCAGATCGAAGACATCATCCAAATGATCAAC    <  SRR4302543.4125995/94‑1 (MQ=60)

                                                                                           GCGAGGCTATCTGACCTATGCCGAGGTCAATGACCATCTGCCGGAAGATATCGTCGATTCAGATCAGATCGAAGACATCATCCAAATGATCAAC    <  SRR4302543.2910989/94‑1 (MQ=60)

                                                                                           GCGAGGCTATCTGACCTATGCCGAGGTCAATGACCATCTGCCGGAAGATATCGTCGATTCAGATCAGATCGAAGACATCATCCAAATGATCAAC    <  SRR4302543.2112604/94‑1 (MQ=60)

                                                                                            CGAGGCTATCTGACCTATGCCGAGGTCAATGACCATCTGCCGGAAGATATCGTCGATTCAGATCAGATCGAAGACATCATCCAAATGATCAACG   <  SRR4302543.6143989/94‑1 (MQ=60)

                                                                                             GAGGCTATCTGACCTATGCCGAGGTCAATGACCATCTGCCGGAAGATATCGTCGATTCAGATCAGATCGAAGACATCATCCAAATGATCAACGA  <  SRR4302543.3169923/94‑1 (MQ=60)

                                                                                             GAGGCTATCTGACCTATGCCGAGGTCAATGACCATCTGCCGGAAGATATCGTCGATTCAGATCAGATCGAAGACATCATCCAAATGATCAACGA  >  SRR4302543.6434931/1‑94 (MQ=60)

CAACACCAACCTCATGAAATAAGTGTGGATACCGTCTTATGGAGCAAAACCCGCAGTCACAGCTGAAACTTCTTGTCACCCGTGGTAAGGAGCAAGGCTATCTGACCTATGCCGAGGTCAATGACCATCTGCCGGAAGATATCGTCGATTCAGATCAGATCGAAGACATCATCCAAATGATCAACGA  >  NC_000913/3210650‑3210836

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 0 ≤` `ATCG/ATCG` `< 15 ≤` `ATCG/ATCG` `< 29 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`