Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.

ALE, Flask, Isolate	Predicted Mutations	Mean Coverage	Total Reads	Percent Mapped	Mapped Reads	Average Read Length
A1 F1 I1 R1	1696	279.3	15874187	97.8%	15524954	93.0

Breseq alignment

BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	3,212,918	A→G	V66A (GTC→GCC)	ygjF ←	hypothetical protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	3,212,918	0	A	G	99.4%	995.1 / ‑3.5	322	V66A (GTC→GCC)	ygjF	hypothetical protein
Reads supporting (aligned to +/- strand): ref base A (1/1); new base G (174/146); total (175/147)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 5.40e-01

Only 100 of 340 total aligned reads displayed.

TTTTTTCAATCAGCTTACGCCCGCCTGCGTGTAGCTCCTGCTTTGAAACTTCATTGGCTTGCACCGTTGGACGGTCTACCAGTTTGGTGACGCCACAACGATAATCCAGCAGATGCTGTGCCTCCTGCGGCTTCAACTGACGGTCGGTAAACCCGGCCTGATATATCACCTTCCAGAAG  >  NC_000913/3212829‑3213007

 tttttCAATCAGCTTACGCCCGCCTGCGTGTAGCTCCTGCTTTGAAACTTCATTGGCTTGCACCGTTGGACGGTCTACCAGGTTGGTgccgcc                                                                                       >  1:3089001/1‑93 (MQ=255)

 tttttCAATCAGCTTACGCCCGCCTGCGTGTAGCTCCTGCTTTGAAACTTCATTGGCTTGCACCGCTGGACGGTCTACCAGTTTGGTGGCGcc                                                                                       >  2:1322050/1‑93 (MQ=255)

   tttCAATCAGCTTACGCCCGCCTGCGTGTAGCTCCTGCTTTGAAACTTCATTGGCTTGCACCGTTGGACGGTCTACCAGTTTGGTGGCGCcac                                                                                     <  2:6303801/93‑1 (MQ=255)

   tttCAATCAGCTGACGCCCGCCTGCGTGTAGCTCCTGCTTTGAAACTTCATTGGCTTGCACCGTTGGACGGTCTACCAGTTTGGTGGCGCcac                                                                                     <  2:1635227/93‑1 (MQ=255)

    ttCAATCAGCTTACGCCCGCCTGCGTGTAGCTCCTGCTTTGAAACTTCATTGGCTTGCACCGTTGGACGGTCTACCAGTTTGGTGGCGCcaca                                                                                    <  1:4389849/93‑1 (MQ=255)

      cAATCAGCTTACGCCCGCCTGCGTGTAGCTCCTGCTTTGAAACTTCATTGGCTTGCACCGTTGGACGGTCTACCAGTTTGGTGGCGCCACAAc                                                                                  <  1:157806/93‑1 (MQ=255)

      cAATCAGCTTACGCCCGCCTGCGTGTAGCTCCTGCTTTGAAACTTCATTGGCTTGCACCGTTGGACGGTCTACCAGTTTGGTGGCGCCACAAc                                                                                  <  2:5794442/93‑1 (MQ=255)

      cAATCAGCTTACGCCCGCCTGCGTGTAGCTCCTGCTTTGAAACTTCATTGGCTTGCACCGTTGGACGGCGTACCACTTTGGTGGCGCCACAAc                                                                                  >  1:2658789/1‑93 (MQ=255)

       aaTCAGCTTACGCCCGCCTGCGTGTAGCTCCTGCTTTGAAACTTCATTGGCTTGCACCGTTGGACGGTCTACCAGTTTGGTGGCGCCCCAACg                                                                                 >  1:2421382/1‑93 (MQ=255)

       aaTCAGCTTACGCCCGCCTGCGTGTAGCTCCTGCTTTGAAACTTCATTGGCTTGCACCGTTGGACGGTCTACCAGTTTGGTGGCGCCACAACg                                                                                 >  1:3177937/1‑93 (MQ=255)

        aTCAGCTTACGCCCGCCTGCGTGTAGCTCCTGCTTTGAAACTTCATTGGCTTGCACCGTTGGACGGTCTACCAGTTTGGTGGCGCCACAACGa                                                                                <  1:1838528/93‑1 (MQ=255)

         tCAGCTTACGCCCGCCTGCGTGTAGCTCCTGCTTTGAAACTTGATTGGCTTGCACCGTTGGACGGTCTACCAGTTTGGTGGCGCCACGACGAt                                                                               >  1:1955037/1‑93 (MQ=255)

         tCAGCTTACGCCCGCCTGCGTGTAGCTCCTGCTTTGAAACTTCATTGGCTTGCACCGTTGGACGGTCTACCAGTTTGGTGGCGCCACAACGAt                                                                               <  2:1935909/93‑1 (MQ=255)

         tCAGCTTACGCCCGCCTGCGTGTAGCTCCTGCTTTGAAACTTCATTGGCTTGCACCGTTGGACGGTCTACCAGTTTGGTGGCGCCACAACGAt                                                                               >  2:2009629/1‑93 (MQ=255)

         tCAGCTTACGCCCGCCTGCGTGTAGCTCCTGCTTTGAAACTTCATTGGCTTGCACCGTTGGACGGTCTACCAGTTTGGTGGCGCCACAACGAt                                                                               >  2:5079669/1‑93 (MQ=255)

         tCAGCTTACGCCCGCCTGCGTGTAGCTCCTGCTTTGAAACTTCATTGGCTTGCACCGTTGGACGGTCTACCAGTTTGGTGGCGCCACAACGAt                                                                               <  1:5300390/93‑1 (MQ=255)

          cAGCTTACGCCCGCCTGCGTGTAGCTCCTGCTTTGAAACTTCATTGGCTTGCACCGTTGGACGGTCTACCAGGTTGACGGCGAGACAACGATa                                                                              >  1:3771078/1‑93 (MQ=255)

           aGCTTACGCCCGCCTGCGTGTAGCTCCTGCTTTGAGACTTCATTGGCTTGCACCGTTGGACGGTCTACCAGTTTGGTGGCGCCACAACGATaa                                                                             >  2:7830184/1‑93 (MQ=255)

           aGCTTACGCCCGCCTGCGTGTAGCTCCTGCTTTGAAACTTCATTGGCTTGCACCGTTGGACGGTCTACCAGTTTGGTGGCGCCACAACGATaa                                                                             <  2:2731439/93‑1 (MQ=255)

            gCTTACGCCCGCCTGCGTGTAGCTCCTGCTTTGAAACTTCATTGGCTTGCACCGTTGGACGGTCTACCAGTTTGGTGGCGCCACAACGATAAt                                                                            <  2:5309161/93‑1 (MQ=255)

            gCTTACGCCCGCCTGCGTGTAGCTCCTGCTTTGAAACTTCATTGGCTTGCACCGTTGGACGGTCTACCAGTTTGGTGGCGCCACAACGATAAt                                                                            >  2:4826601/1‑93 (MQ=255)

             cTTACGCCCGCCTGCGTGTAGCTCCTGCTTTGAAACTTCATTGGCTTGCACCGTTGGACGGTCTACCAGTTTGGTGGCGCCACAACGATAATc                                                                           <  1:7188867/93‑1 (MQ=255)

              ttACGCCCGCCTGCGTGTAGCTCCTGCTTTGAAACTTCATTGGCTTTCACCGATGGGCGTTCTTTCAGTTTGGTGGAGCCACAAAGATAATcc                                                                          >  1:750546/1‑93 (MQ=255)

              ttACGCCCGCCTGCGTGTAGCTCCTGCTTTGAAACTTCATTGGCTTGCACCGTTGGACGGTCTACCAGTTTGGTGGCGCCACAACGATAATcc                                                                          >  2:4983773/1‑93 (MQ=255)

              ttACGCCCGCCTGCGTGTAGCTCCTGCTTTGAAACTTCATTGGCTTGCACCGTTGGACGGTCTACCAGTTTGGTGGCGCCACAACGATAATcc                                                                          >  1:3531639/1‑93 (MQ=255)

               tACGCCCGCCTGCGTGTAGCTCCTGCTTTGAAACTTCATTGGCTTGCACCGTTGGACGGTCTACCAGTTTGGTGGCGCCACAACGATAATCca                                                                         <  2:2329409/93‑1 (MQ=255)

                 cgcccgccTGCGTGTAGCTCCTGCTTTGAAACTTCATTGGCTTGCACCGTTGGACGGTCTACCAGTTTGGTGGCGCCACAACGATAATCcagc                                                                       <  1:1251944/93‑1 (MQ=255)

                   cccgccTGCGTGTAGCTCCTGCTTTGAAACTTCATTGGCTTGCACCGTTGGACGGTCTACCAGTTTGGTGGCGCCACAACGATAATCcagcag                                                                     >  1:6981660/1‑93 (MQ=255)

                    ccgccTGCGTGTAGCTCCTGCTTTGAAACTTCATTGGCTTGCACCGTTGGACGGTCTACCAGTTTGGTGGCGCCACAACGATAATCCAGCAGa                                                                    >  2:2134854/1‑93 (MQ=255)

                    ccgccTGCGTGTAGCTCCTGCTTTGAAACTTCATTGGCTTGCACCGTTGGACGGTCTACCAGTTTGGTGGCGCCACAACGATAATCCAGCAGa                                                                    <  1:1668731/93‑1 (MQ=255)

                    ccgccTGCGTGTAGCTCCTGCTTTGAAACTTCATTGGCTTGCACCGTTGGACGGTCTACCAGTTTGGTGGCGCCACAACGATAATCCAGCAGa                                                                    >  1:7068422/1‑93 (MQ=255)

                    ccgccTGCGTGTAGCTCCTGCTTTGAAACTTCATTGGCTTGCACCGTTGGACGGTCTACCAGTTTGGTGGCGCCACAACGATAATCCAGCAGa                                                                    <  1:6941038/93‑1 (MQ=255)

                    ccgccTGCGTGTAGCTCCTGCTTCGAAACTTCATTGGCTTGCACCGTTGGACGGTCTACCAGTTTGGTGGCGCCACAACGATAATCCAGCAGa                                                                    <  2:4325285/93‑1 (MQ=255)

                     cgccTGCGTGTAGCTCCTGCTTTGAAACTTCATTGGCTTGCACCGTTGGACGGTCTACCAGTTTGGTGGCGCCACAACGATAATCCAGCAGAt                                                                   <  2:5221423/93‑1 (MQ=255)

                     cgccTGCGTGTAGCTCCTGCTTTGAAACTTCATTGGCTTGCACCGTTGGACGGTCTACCAGTTTGGTGGCGCCACAACGATAATCCAGCAGAt                                                                   >  2:678954/1‑93 (MQ=255)

                     cgccTGCGTGTAGCTCCTGCTTTGAAACTTCATTGGCTTGCACCGTTGGACGGTCTACCAGTTTGGTGGCGCCACAACGATAATCCAGCAGAt                                                                   >  1:6772043/1‑93 (MQ=255)

                       ccTGCGTGTAGCTCCTGCTTTGAAACTTCATTGGCTTGCACCGTTGGACGGTCTACCAGTTTGGTGGCGCCACAACGATAATCCAGCAGATGc                                                                 >  1:926189/1‑93 (MQ=255)

                        cTGCGTGTAGCTCCTGCTTTGAAACTTCATTGGCTTGCACCGTTGGACGGTCTACCAGTTTGGTGGCGCCACAACGATAATCCAGCAGATGCt                                                                <  1:2788159/93‑1 (MQ=255)

                         tGCGTGTAGCTCCTGCTTTGAAACTTCATTGGCTTGCACCGTTGGACGGTCTACCAGTTTGGTGGCGCCACAACGATAATCCAGCAGATGCtg                                                               >  1:2229115/1‑93 (MQ=255)

                         tGCGTGTAGCTCCTGCTTTGAAACTTCATTGGCTTGCACCGTTGGACGGTCTACCAGTTTGGTGGCGCCACAACGATAATCCAGCAGATGCtg                                                               >  1:104442/1‑93 (MQ=255)

                            gtgtAGCTCCTGCTTTGAAACTTCATTGGCTTGCACCGGTGGACGGTCTACCAGTTTGGTGGCGCCCCAACGATAATCCAGCAGATGCTGTGc                                                            >  2:4034909/1‑93 (MQ=255)

                             tgtAGCTCCTGCTTTGAAACTTCATTGGCTTGCACCGTTGGACGGTCTACCAGTTTGGTGGCGCCACAACGATAATCCAGCAGATGCTGTGcc                                                           >  2:1854226/1‑93 (MQ=255)

                              gtAGCTCCTGCTTTGAAACTTCATTGGCTTGCACCGTTGGACGGTCTACCAGTTTGGTGGCGCCACAACGATAATCCAGCAGATGCTGTGcct                                                          <  1:4653101/93‑1 (MQ=255)

                               tAGCTCCTGCTTTGAAACTTCATTGGCTTGCACCGTTGGACGGTCTACCAGTTTGGTGGCGCCCCCACGATAATCCAGCAGATGCTGTGcctc                                                         >  2:79070/1‑93 (MQ=255)

                               tAGCTCCTGCTTTGAAACTTCATTGGCTTGCACCGTTGGACGGTCTACCAGTTTGGTGGCGCCACAACGATAATCCAGCAGATGCTGTGcctc                                                         >  2:3787357/1‑93 (MQ=255)

                               tAGCTCCTGCTTTGAAACTTCATTGGCTTGCACCGTTGGACGGTCTACCAGTTTGGTGGCGCCACAACGATAATCCAGCAGATGCTGTGcctc                                                         <  2:2970218/93‑1 (MQ=255)

                                aGCTCCTGCTTTGAAACTTCATTGGCTTGCACCGTTGGACGGTCTACCAGTTTGGTGGCGCCACAACGATAATCCAGCAGATGCTGTGcctcc                                                        >  1:5920503/1‑93 (MQ=255)

                                aGCTCCTGCTTTGAAACTTCATTGGCTTGCACCGTTGGACGGGCTACCAGTTTGGTGGCGCCACAACGATAATTCAGCAGATGCTGTGcctcc                                                        >  2:5582400/1‑93 (MQ=255)

                                 gCTCCTGCTTTGAAACTTCATTGGCTTGCACCGTTGGACGGTCTACCAGTTTGGTGGCGCCACAACGATAATCCAGCAGATGCTGTGcctcct                                                       >  1:6893088/1‑93 (MQ=255)

                                   tCCTGCTTTGAAACTTCATTGGCTTGCACCGTTGGACGGTCTACCAGTTTGGTGGCGCCACAACGATAATCCAGCAGATGCTGTGCCTCCTGc                                                     >  1:856390/1‑93 (MQ=255)

                                   tCCTGCTTTGAAACTTCATTGGCTTGCACCGTTGGACGGTCTACCAGTTTGGTGGCGCCACAACGATAATCCAGCAGATGCTGTGCCTCCTGc                                                     <  2:7636768/93‑1 (MQ=255)

                                    ccTGCTTTGAAACTTCATTGGCTTGCACCGTTGGACGGTCTACCAGTTTGGTGGCGCCACAACGATAATCCAGCAGATGCTGTGCCTCCTGCg                                                    >  2:543747/1‑93 (MQ=255)

                                     cTGCTTTGAAACTTCATTGGCTTGCACCGTTGGACGGTCTACCAGTTTGGTGGCGCCACAACGATAATCCAGCAGATGCTGTGCCTCCTGCgg                                                   >  1:5231056/1‑93 (MQ=255)

                                       gCTTTGAAACTTCATTGGCTTGCACCGTTGTACGGTCTACCAGTTTGGTGGCGCCACAACGATAATCCAGCAGATGCTGTGCCTCCTGCGGCt                                                 <  2:7729696/93‑1 (MQ=255)

                                        cTTTGAAACTTCATTGGCTTGCACCGTTGGACGGTCTACCAGTTTGGTGGCGCCACAACGATAATCCAGCAGATGCTGTGCCTCCTGCGGCtt                                                >  2:4563583/1‑93 (MQ=255)

                                         tttGAAACTTCATTGGCTTGCACCGTTGGACGGTCTACCAGTTTGGTGGCGCCACAACGATAATCCAGCAGATGCTGTGCCTCCTGCGGCTTc                                               >  1:6650581/1‑93 (MQ=255)

                                          ttGAAACTTCATTGGCTTGCACCGTTGGACGGTCTACCAGTTTGGTGGCGCCACAACGATAATCCAGCAGATGCTGTGCCTCCTGCGGCTTCa                                              >  1:1770152/1‑93 (MQ=255)

                                            taaaCTTCATTGGCTTGCACCGTTGGACGGTCTACCAGTTTGGTGGCGCCACAACGATAATCCAGCAGATGCTGTGCCTCCTGCGGCTTCAAc                                            <  2:6342157/92‑1 (MQ=255)

                                            gAAACTTCATTGGCTTGCACCGTTGGACGGTCTACCAGTTTGGTGGCGCCACAACGATAATCCAGCAGATGCTGTGCCTCCTGCGGCTTCAAc                                            <  1:950705/93‑1 (MQ=255)

                                             aaaCTTCATTGGCTTGCACCGTTGGACGGTCTACCAGTTTGGTGGCGCCACAACGATAATCCAGCAGATGCTGTGCCTCCTGCGGCTTCAACt                                           <  2:6045028/93‑1 (MQ=255)

                                              aaCTTCATTGGCTTGCACCGTTGGACGGTCTACCAGGTTGGTGGCGCCACAACGATAATTCAGCAGATGCTGTGCCTCCTGCGGCTTCAACTg                                          >  1:2364568/1‑93 (MQ=255)

                                               aCTTCATTGGCTTGCACCGTTGGACGGTCTACCAGTTTGGTGGCGCCACAACGATAATCCAGCAGATGCTGTGCCTCCTGCGGCTTCAACTGa                                         <  2:3635120/93‑1 (MQ=255)

                                               aCTTCATTGGCTTGCACCGTTGGACGGTCTACCAGTTTGGTGGCACCACAACGATAATCCAGCAGATGCTGTGCCTCCTGCGGCTTCAACTGa                                         >  2:7308787/1‑93 (MQ=255)

                                                 ttCATTGGCTTGCACCGTTGGACGGTCTACCAGTTTGGTGGCGCCACAACGATAATCCAGCAGATGCTGTGCCTCCTGCGGCTTCAACTGAcg                                       >  2:2452958/1‑93 (MQ=255)

                                                 ttCATTGGCTTGCACCGTTGGACGGTCTACCAGTTTGGTGGCGCCACAACGATAATCCAGCAGATGCTGTGCCTCCTGCGGCTTCAACTGAcg                                       <  1:3412826/93‑1 (MQ=255)

                                                   cATTGGCTTGCACCGTTGGACGGTCTACCAGTTTGGTGGCGCCACAACGATAATCCAGCAGATGCTGTGCCTCCTGCGGCTTCAACTGAcggt                                     <  2:4631718/93‑1 (MQ=255)

                                                    aTTGGCTTGCACCGTTGGACGGTCTACCAGTTTGGTGGCGCCACAACGATAATCCAGCAGATGCTGTGCCTCCTGCGGCTTCAACTGAcggtc                                    <  1:7355649/93‑1 (MQ=255)

                                                    aTTGGCTTGCACCGTTGGACGGTCTACCAGTTTGGTGGCGCCACAACGATAATCCAGCAGATGCTGTGCCTCCTGCGGCTTCAACTGAcggtc                                    >  2:7378149/1‑93 (MQ=255)

                                                      tGGCTTGCACCGTTGGACGGTCTACCAGTTTGGTGGCGCCACAACGATAATCCAGCAGATGCTGTGCCTCCTGCGGCTTCAACTGAcggtcgg                                  >  1:4966802/1‑93 (MQ=255)

                                                       ggCTTGCACCGTTGGACGGTCTACCAGTTTGGTGGCGCCACAACGATAATCCAGCAGATGCTGTGCCTCCTGCGGCTTCAACTGAcggtcggt                                 <  2:929337/93‑1 (MQ=255)

                                                        gCTTGCACCGTTGGACGGTCTACCAGTTTGGTGGCGCCACAACGATAATCCAGCAGATGCTGTGCCTCCTGCGGCTTCAACTGACGGTCGGTa                                <  1:571852/93‑1 (MQ=255)

                                                        gCTTGCACCGTTGGACGGTCTACCAGTTTGGTGGCGCCACAACGATAATCCAGCAGATGCTGTGCCTCCTGCGGCTTCAACTGACGGTCGGTa                                >  1:3018090/1‑93 (MQ=255)

                                                           tGCACCGTTGGACGGTCTACCAGTTTGGTGGCGCCACAACGATAATCCAGCAGATGCTGTGCCTCCTGCGGCTTCAACTGACGGTCGGTAAAc                             <  2:4878997/93‑1 (MQ=255)

                                                           tGCACCGTTGGACGGTCTACCAGTTTGGTGGCGCCACAACGATAATCCAGCAGATGCTGTGCCTCCTGCGGCTTCAACTGACGGTAGGTAAAc                             >  2:3275789/1‑93 (MQ=255)

                                                            gCACCGTTGGACGGTCTACCAGTTTGGTGGCGCCACAACGATAATCCAGCAGATGCTGTGCCTCCTGCGGCTTCAACTGACGGTCGGTAAAcc                            <  2:4774744/93‑1 (MQ=255)

                                                             cACCGTTGGACGGTCTACCAGTTTGGTGGCGCCACAACGATAATCCAGCAGATGCTGTGCCTCCTGCGGCTTCAACTGACGGTCGGTAAAccc                           <  1:4554179/93‑1 (MQ=255)

                                                              aCCGTTGGACGGTCTACCAGTTTGGTGGCGCCACAACGATAATCCAGCAGATGCTGTGCCTCCTGCGGCTTCAACTGACGGTCGGTAAACCCg                          <  1:7607627/93‑1 (MQ=255)

                                                               ccGTTGGACGGTCTACCAGTTTGGTGGCGCCACAACGATAATCCAGCAGATGCTGTGCCTCCTGCGGCTTCAACTGACGGTCGGTAAACCCgg                         >  1:4191600/1‑93 (MQ=255)

                                                                 gTTGGACGGTCTACCAGTTTGGTGGCGCCACAACGATAATCCAGCAGATGCTGTGCCTCCTGCGGCTTCAACTGACGGTCGGTAAACCCGGcc                       >  1:1170953/1‑93 (MQ=255)

                                                                 gTTGGACGGTCTACCAGTTTGGTGGCGCCACAACGATAATCCAGCAGATGCTGTGCCTCCTGCGGCTTCAACTGACGGTCGGTAAACCCGGcc                       >  2:4102182/1‑93 (MQ=255)

                                                                 gTTGGACGGTCTACCAGTTTGGTGGCGCCACAACGATAATCCAGCAGATGCTGTGCCTCCTGCGGCTTCAACTGACGGTCGGTAAACCCGGcc                       >  1:1479255/1‑93 (MQ=255)

                                                                 gTTGGACGGTCTACCAGTTTGGTGGCGCCACAACGATAATCCAGCAGATGCTGTGCCTCCTGCGGCTTCAAATGACGGTCGGTAAACCCGGcc                       >  2:1784789/1‑93 (MQ=255)

                                                                   tGGACGGTCTACCAGTTGTGTGGCCCCACAACGATAATCCAGCAGATGCTGTGCCTCCTGCGGCTTCAACTGACGGTCGGTAAACCCGGCCTg                     <  1:5422476/93‑1 (MQ=255)

                                                                      aCGGTCTACCAGTTTGGTGGCGCCACAACGATAATCCAGCAGATGCTGTGCCTCCTGCGGCTTCAACTGACGGTCGGTAAACCCGGCCTGata                  <  1:745459/93‑1 (MQ=255)

                                                                      aCGGTCTACCAGTTTGGTGGCGCCACAACGATAATCCAGCAGATGCTGTGCCTCCTGCGGCTTCAACTGACGGTCGGTAAACCCGGCCTGata                  <  1:7767607/93‑1 (MQ=255)

                                                                         gTCTACCAGTTTGGTGGCGCCACAACGATAATCCAGCAGATGCTGTGCCTCCTGCGGCTTCAACTGACGGTCGGTAAACCCGGCCTGatatat               <  1:1331732/93‑1 (MQ=255)

                                                                         gTCTACCAGTTTGGTGGCGCCACAACGATAATCCAGCAGATGCTGTGCCTCCTGCGGCTTCAACTGACGGTCGGTAAACCCGGCCTGatatat               >  1:7896827/1‑93 (MQ=255)

                                                                         gTCTACCAGTTTGGTGGCGCCACAACGATAATCCAGCAGATGCTGTGCCTCCTGCGGCTTCAACTGACGGTCGGTAAACCCGGCCTGatatat               >  2:2053001/1‑93 (MQ=255)

                                                                          tCTACCATTTTGGTGGCGCCACAACAATAATCTAGCAGATGCAGTGCCTCCTGCGGCTTCAACTGACAGTCGGTAATCCCAGCCTGGTATATc              <  2:7004479/93‑1 (MQ=255)

                                                                          tCTACCAGTTTGGTGGCGCCACAACGATAATCCAGCAGATGCTGTGCCTCCTGCGGCTTCAACTGACGGTCGGTAAACCCGGCCTGATATATc              <  2:6194367/93‑1 (MQ=255)

                                                                            tACCAGTTTGGTGGCGCCACAACGATAATCCAGCAGATGCTGTGCCTCCTGCGGCTTCAACTGACGGTCGGTAAACCCGGCCTGATATATGAc            >  2:3436091/1‑93 (MQ=255)

                                                                            tACCAGTTTGGTGGCGCCACAACGATAATCCAGCAGATGCTGTGCCTCCTGCGGCTTCAACTGACGGTCGGTAAACCCGGCCTGATATATCAc            <  2:1140117/93‑1 (MQ=255)

                                                                                aGTTTGGTGGCGCCACAACGATAATCCAGCAGATGCTGTGCCTCCTGCGGCTTCAACTGACGGTCGGTAAACCCGGCCTGATATATCACCTTc        >  2:709445/1‑93 (MQ=255)

                                                                                aGTTTGGTGGCGCCACAACGATAATCCAGCAGATGCTGTGCCTCCTGCGGCTTCAACTGACGGTCGGTAAACCCGGCCTGATATATCACCTTc        >  2:2791823/1‑93 (MQ=255)

                                                                                 gTTTGGTGGCGCCACAACGATAATCCAGCAGATGCTGTGCCTCCTGCGGCTTCAACTGACGGTCGGTAAACCCGGCCTGATATATCACCTTcc       >  1:7299368/1‑93 (MQ=255)

                                                                                  tttGGTGGCGCCACAACGATAATCCAGCAGATGCTGTGCCTCCTGCGGCTTCAACTGACGGTCGGTAAACCCGGCCTGATATATCACCTTCCa      >  2:1375085/1‑93 (MQ=255)

                                                                                  tttGGTGGCGCCACAACGATAATCCAGCAGATGCTGTGCCTCCTGCGGCTTCAACTGACGGTCGGTAAACCCGGCCTGATATATCACCTTCCa      <  1:3349867/93‑1 (MQ=255)

                                                                                    tggtggCGCCACAACGATAATCCAGCAGATGCTGTGCCTCCTGCGGCTTCAACTGACGGTCGGTAAACCCGGCCTGATATATCACCTTCCAGa    <  2:6424023/93‑1 (MQ=255)

                                                                                    tggtggCGCCACAACGATAATCCAGCAGATGCTGTGCCTCCTGCGGCTTCAACTGACGGTCGGTAAACCCGGCCTGATATATCACCTTCCAGa    >  2:4407833/1‑93 (MQ=255)

                                                                                      gTGGCGCCACAACGATAATCCAGCAGATGCTGTGCCTCCTGCGGCTTCAACTGACGGTCGGTAAACCCGGCCTGATATATCACCTTCCAGAAg  >  1:3893601/1‑93 (MQ=255)

TTTTTTCAATCAGCTTACGCCCGCCTGCGTGTAGCTCCTGCTTTGAAACTTCATTGGCTTGCACCGTTGGACGGTCTACCAGTTTGGTGACGCCACAACGATAATCCAGCAGATGCTGTGCCTCCTGCGGCTTCAACTGACGGTCGGTAAACCCGGCCTGATATATCACCTTCCAGAAG  >  NC_000913/3212829‑3213007

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 19 ≤` `ATCG/ATCG` `< 28 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`

GATK/CNVnator alignment

BRESEQ :: bam2aln output

TCAATTTTTTCAATCAGCTTACGCCCGCCTGCGTGTAGCTCCTGCTTTGAAACTTCATTGGCTTGCACCGTTGGACGGTCTACCAGTTTGGTGACGCCACAACGATAATCCAGCAGATGCTGTGCCTCCTGCGGCTTCAACTGACGGTCGGTAAACCCGGCCTGATATATCACCTTCCAGAAGCG  >  NC_000913/3212825‑3213009

TCAATTTTTTCAATCAGCTTACGCCCGCCTGCGTGTAGCTCCTGCTTTGAAACTTCATTGGCTTGCACCGTTGGACGGTCTACCAGTTTGGTGG                                                                                             <  SRR4302543.6930447/94‑1 (MQ=60)

TCAATTTTTTCAATCAGCTTACGCCCGCCTGCGTGTAGCTCCTGCTTTGAAACTTCATTGGCTTGCACCGTTGGACGGTCTACCAGTTTGGTGG                                                                                             <  SRR4302543.6930449/94‑1 (MQ=60)

 CAATTTTTTCAATCAGCTTACGCCCGCCTGCGTGTAGCTCCTGCTTTGAAACTTCATTGGCTTGCACCGTTGGACGGTCTACCAGTTTGGTGGC                                                                                            >  SRR4302543.2158251/1‑94 (MQ=60)

 CAATTTTTTCAATCAGCTTACGCCCGCCTGCGTGTAGCTCCTGCTTTGAAACTTCATTGGCTTGCACCGTTGGACGGTCTACCAGTTTGGTGGC                                                                                            <  SRR4302543.3020067/94‑1 (MQ=60)

    TTTTTTCAATCAGCTTACGCCCGCCTGCGTGTAGCTCCTGCTTTGAAACTTCATTGGCTTGCACCGTTGGACGGTCTACCAGGTTGGTGCCGCC                                                                                         >  SRR4302543.3116778/1‑94 (MQ=60)

     TTTTTCAATCAGCTTACGCCCGCCTGCGTGTAGCTCCTGCTTTGAAACTTCATTGGCTTGCACCGTTGGACGGTCTACCAGTTTGGTGGCGCCA                                                                                        <  SRR4302543.6783762/94‑1 (MQ=60)

      TTTTCAATCAGCTTACGCCCGCCTGCGTGTAGCTCCTGCTTTGAAACTTCATTGGCTTGCACCGTTGGACGGTCTACCAGTTTGGTGGCGCCAC                                                                                       <  SRR4302543.7022445/94‑1 (MQ=60)

       TTTCAATCAGCTTACGCCCGCCTGCGTGTAGCTCCTGCTTTGAAACTTCATTGGCTTGCACCGTTGGACGGTCTACCAGTTTGGTGGCGCCACA                                                                                      <  SRR4302543.2333758/94‑1 (MQ=60)

        TTCAATCAGCTTACGCCCGCCTGCGTGTAGCTCCTGCTTTGAAACTTCATTGGCTTGCACCGTTGGACGGTCTACCAGTTTGGTGGCGCCACAA                                                                                     <  SRR4302543.4429644/94‑1 (MQ=60)

         TCAATCAGCTTACGCCCGCCTGCGTGTAGCTCCTGCTTTGAAACTTCATTGGCTTGCACCGTTGGACGGTCTACCAGTTTGGTGGCGCCACAAC                                                                                    >  SRR4302543.5332882/1‑94 (MQ=60)

         TCAATCAGCTTACGCCCGCCTGCGTGTAGCTCCTGCTTTGAAACTTCATTGGCTTGCACCGTTGGACGGTCTACCAGTTTGGTGGCGCCACAAC                                                                                    <  SRR4302543.5874926/94‑1 (MQ=60)

         TCAATCAGCTTACGCCCGCCTGCGTGTAGCTCCTGCTTTGAAACTTCATTGGCTTGCACCGTTGGACGGCGTACCACTTTGGTGGCGCCACAAC                                                                                    >  SRR4302543.2682894/1‑94 (MQ=60)

          CAATCAGCTTACGCCCGCCTGCGTGTAGCTCCTGCTTTGAAACTTCATTGGCTTGCACCGTTGGACGGTCTACCAGTTTGGTGGCGCCCCAACG                                                                                   >  SRR4302543.2443242/1‑94 (MQ=60)

          CAATCAGCTTACGCCCGCCTGCGTGTAGCTCCTGCTTTGAAACTTCATTGGCTTGCACCGTTGGACGGTCTACCAGTTTGGTGGCGCCACAACG                                                                                   <  SRR4302543.1796152/94‑1 (MQ=60)

          CAATCAGCTTACGCCCGCCTGCGTGTAGCTCCTGCTTTGAAACTTCATTGGCTTGCACCGTTGGACGGTCTACCAGTTTGGTGGCGCCACAACG                                                                                   >  SRR4302543.3206580/1‑94 (MQ=60)

          CAATCAGCTTACGCCCGCCTGCGTGTAGCTCCTGCTTTGAAACTTCATTGGCTTGCACCGTTGGACGGTCTACCAGTTTGGTGGCGCCACAACG                                                                                   <  SRR4302543.159160/94‑1 (MQ=60)

          CAATCAGCTTACGCCCGCCTGCGTGTAGCTCCTGCTTTGAAACTTCATTGGCTTGCACCGTTGGACGGTCTACCAGTTTGGTGGCGCCACAACG                                                                                   <  SRR4302543.159159/94‑1 (MQ=60)

          CAATCAGCTTACGCCCGCCTGCGTGTAGCTCCTGCTTTGAAACTTCATTGGCTTGCACCGTTGGACGGTCTACCAGTTTGGTGGCGCCACAACG                                                                                   <  SRR4302543.3104992/94‑1 (MQ=60)

          CAATCAGCTTACGCCCGCCTGCGTGTAGCTCCTGCTTTGAAACTTCATTGGCTTGCACCGTTGGACGGTCTACCAGTTTGGTGGCGCCACAACG                                                                                   <  SRR4302543.884636/94‑1 (MQ=60)

          CAATCAGCTTACGCCCGCCTGCGTGTAGCTCCTGCTTTGAAACTTCATTGGCTTGCACCGTTGGACGGTCTACCAGTTTGGTGGCGCCACAACG                                                                                   >  SRR4302543.7907501/1‑94 (MQ=60)

          CAATCAGCTTACGCCCGCCTGCGTGTAGCTCCTGCTTTGAAACTTCATTGGCTTGCACCGTTGGACGGTCTACCAGTTTGGTGGCGCCACAACG                                                                                   <  SRR4302543.4510487/94‑1 (MQ=60)

           AATCAGCTTACGCCCGCCTGCGTGTAGCTCCTGCTTTGAAACTTCATTGGCTTGCACCGTTGGACGGTCTACCAGTTTGGTGGCGCCACAACGA                                                                                  >  SRR4302543.4084372/1‑94 (MQ=60)

           AATCAGCTTACGCCCGCCTGCGTGTAGCTCCTGCTTTGAAACTTCATTGGCTTGCACCGTTGGACGGTCTACCAGTTTGGTGGCGCCACAACGA                                                                                  >  SRR4302543.3687053/1‑94 (MQ=60)

            ATCAGCTTACGCCCGCCTGCGTGTAGCTCCTGCTTTGAAACTTGATTGGCTTGCACCGTTGGACGGTCTACCAGTTTGGTGGCGCCACGACGAT                                                                                 >  SRR4302543.1972571/1‑94 (MQ=60)

            ATCAGCTTACGCCCGCCTGCGTGTAGCTCCTGCTTTGAAACTTCATTGGCTTGCACCGTTGGACGGTCTACCAGTTTGGTGGCGCCACAACGAT                                                                                 >  SRR4302543.3421626/1‑94 (MQ=60)

            ATCAGCTTACGCCCGCCTGCGTGTAGCTCCTGCTTTGAAACTTCATTGGCTTGCACCGTTGGACGGTCTACCAGTTTGGTGGCGCCACAACGAT                                                                                 <  SRR4302543.1855064/94‑1 (MQ=60)

             TCAGCTTACGCCCGCCTGCGTGTAGCTCCTGCTTTGAAACTTCATTGGCTTGCACCGTTGGACGGTCTACCAGTTTGGTGGCGCCACAACGATA                                                                                <  SRR4302543.5348239/94‑1 (MQ=60)

             TCAGCTTACGCCCGCCTGCGTGTAGCTCCTGCTTTGAAACTTCATTGGCTTGCACCGTTGGACGGTCTACCAGTTTGGTGACGCCACAACGATA                                                                                <  SRR4302543.6748437/94‑1 (MQ=60)

              CAGCTTACGCCCTCCTGCGTGTAGCTCCTGCTTTGAAACTTCATTGGCTTGCACCGTTGGACGGTCTACCAGTTTGGTGGCGCCACAACGATAA                                                                               <  SRR4302543.2833886/94‑1 (MQ=60)

              CAGCTTACGCCCGCCTGCGTGTAGCTCCTGCTTTGAAACTTCATTGGCTTGCACCGTTGGACGGTCTACCAGTTTGGTGGCGCCACAACGATAA                                                                               >  SRR4302543.2808351/1‑94 (MQ=60)

                GCTTACGCCCGCCTGCGTGTAGCTCCTGCTTTGAAACTTCATTGGCTTGCACCGTTGGAGGGTCGACACGTTTGGCGGCGCCACAACGATCATC                                                                             >  SRR4302543.7267652/1‑94 (MQ=60)

                 CTTACGCCCGCCTGCGTGTAGCTCCTGCTTTGAAACTTCATTGGCTTTCACCGATGGGCGTTCTTTCAGTTTGGTGGAGCCACAAAGATAATCC                                                                            >  SRR4302543.757206/1‑94 (MQ=53)

                 CTTACGCCCGCCTGCGTGTAGCTCCTGCTTTGAAACTTCATTGGCTTGCACCGTTGGACGGTCTACCAGTTTGGTGGCGCCACAACGATAATCC                                                                            <  SRR4302543.7258599/94‑1 (MQ=60)

                 CTTACGCCCGCCTGCGTGTAGCTCCTGCTTTGAAACTTCATTGGCTTGCACCGTTGGACGGTCTACCAGTTTGGTGGCGCCACAACGATAATCC                                                                            >  SRR4302543.3563084/1‑94 (MQ=60)

                  TTACGCCCGCCTGCGTGTAGCTCCTGCTTTGAAACTTCATTGGCTTGCACCGTTGGACGGTCTACCAGTTTGGTGGCGCCACAACGACAATCCA                                                                           <  SRR4302543.942557/94‑1 (MQ=60)

                  TGACGCCCGCCTGCGTGTAGCTCCTGCTTTGAAACTTCATTGGCTTGCACCGTTGGACGGTCTACCAGTTTGGTGGCGCCACAACGATAATCCA                                                                           <  SRR4302543.3474132/94‑1 (MQ=60)

                   TACGCCCGCCTGCGTGTAGCTCCTGCTTTGAAACTTCATTGGCTTGCACCGTTGGACGGTCTACCAGTTTGGTGGCGCCACAACGATAATCCAG                                                                          <  SRR4302543.4288062/94‑1 (MQ=60)

                    ACGCCCGCCTGCGTGTAGCTCCTGCTTTGAAACTTCATTGGCTTGCACCGTTGGACGGTCTACCAGTTTGGTGGCGCCACAACGATAATCCAGC                                                                         <  SRR4302543.7663522/94‑1 (MQ=60)

                     CGCCCGCCTGCGTGTAGCTCCTGCTTTGAAACTTCATTGGCTTGCACCGTTGGACGGTCTACCAGTTTGGTGGCGCCACAACGATAATCCAGCA                                                                        >  SRR4302543.6168230/1‑94 (MQ=60)

                     CGCCCGCCTGCGTGTAGCTCCTGCTTTGAAACTTCATTGGCTTGCACCGTTGGACGGTCTACCAGTTTGGTGGCGCCACAACGATAATCCAGCA                                                                        <  SRR4302543.1263168/94‑1 (MQ=60)

                      GCCCGCCTGCGTGTAGCTCCTGCTTTGAAACTTCATTGGCTTGCACCGTTGGACGGTCTACCAGTTTGGTGGCGCCACAACGATAATCCAtcca                                                                       >  SRR4302543.2799221/1‑90 (MQ=60)

                      GCCCGCCTGCGTGTAGCTCCTGCTTTGAAACTTCATTGGCTTGCACCGTTGGACGGTCTACCAGTTTGGTGGCGCCACAACGATAATCCAGCAG                                                                       >  SRR4302543.6974465/1‑94 (MQ=60)

                      GCCCGCCTGCGTGTAGCTCCTGCTTTGAAACTTCATTGGCTTGCACCGTTGGACGGTCTACCAGTTTGGTGGCGCCACAACGATAATCCAGCAG                                                                       >  SRR4302543.54268/1‑94 (MQ=60)

                      GCCCGCCTGCGTGTAGCTCCTGCTTTGAAACTTCATTGGCTTGCACCGTTGGACGGTCTACCAGTTTGGTGGCGCCACAACGATAATCCAGCAG                                                                       >  SRR4302543.7047368/1‑94 (MQ=60)

                       CCCGCCTGCGTGTAGCTCCTGCTTTGAAACTTCATTGGCTTGCACCGTTGGACGGTCTACCAGTTTGGTGGCGCCACAACGATAATCCAGCAGA                                                                      >  SRR4302543.7137053/1‑94 (MQ=60)

                       CCCGCCTGCGTGTAGCTCCTGCTTTGAAACTTCATTGGCTTGCACCGTTGGACGGTCTACCAGTTTGGTGGCGCCACAACGATAATCCAGCAGA                                                                      >  SRR4302543.1277119/1‑94 (MQ=60)

                       CCCGCCTGCGTGTAGCTCCTGCTTTGAAACTTCATTGGCTTGCACCGTTGGACGGTCTACCAGCTTGGTGGCGCCACAACGATAATCCAGCAGA                                                                      >  SRR4302543.3287591/1‑94 (MQ=60)

                       CCCGCCTGCGTGTAGCTCCTGCTTTGAAACTTCATTGGCTTGCACCGTTGGAAGGTCTACCAGTTTGGTGGGGGCACAACGATAATCaagagga                                                                      >  SRR4302543.2467065/1‑87 (MQ=60)

                        CCGCCTGCGTGTAGCTCCTGCTTTGAAACTTCATTGGCTTGCACCGTTGGACGGTCTACCAGTTTGGTGGCGCCACAACGATAATCCAGCAGAT                                                                     <  SRR4302543.7006327/94‑1 (MQ=60)

                        CCGCCTGCGTGTAGCTCCTGCTTTGAAACTTCATTGGCTTGCACCGTTGGACGGTCTACCAGTTTGGTGGCGCCACAACGATAATCCAGCAGAT                                                                     <  SRR4302543.4589281/94‑1 (MQ=60)

                        CCGCCTGCGTGTAGCTCCTGCTTTGAAACTTCATTGGCTTGCACCGTTGGACGGTCTACCAGTTTGGTGGCGCCACAACGATAATCCAGCAGAT                                                                     >  SRR4302543.6836016/1‑94 (MQ=60)

                        CCGCCTGCGTGTAGCTCCTGCTTTGAAACTTCATTGGCTTGCACCGTTGGACGGTCTACCAGTTTGGTGGCGCCACAACGATAATCCAGCAGAT                                                                     <  SRR4302543.7714977/94‑1 (MQ=60)

                        CCGCCTGCGTGTAGCTCCTGCTTTGAAACTTCATTGGCTTGCACCGTTGGACGGTCTACCAGTTTGGTGGCGCCACAACGATAATCCAGCAGAT                                                                     <  SRR4302543.1683682/94‑1 (MQ=60)

                        CCGCCTGCGTGTAGCTCCTGCTTTGAAACTTCATTGGCTTGCACCGTTGGACGGTCTACCAGTTTGGTGGCGCCACAACGATAATCCAGCAGAT                                                                     <  SRR4302543.1825524/94‑1 (MQ=60)

                         CGCCTGCGTGTAGCTCCTGCTTTGAAACTTCATTGGCTTGCACCGTTGGACGGTCTACCAGTTTGGTGGCGCCACAACGATAATCCAGCAGATG                                                                    <  SRR4302543.1188369/94‑1 (MQ=60)

                          GCCTGCGTGTAGCTCCTGCTTTGAAACTTCATTGGCTTGCACCGTTGGACGGTCTACCAGTTTGGTGGCGCCACAACGATAATCCAGCAGATGC                                                                   >  SRR4302543.934287/1‑94 (MQ=60)

                           CCTGCGTGTAGCTCCTGCTTTGAAACTTCATTGGCTTGCACCGTTGGACGGTCTACCAGTTTGGTGGCGCCACAACGATAATCCAGCAGATGCT                                                                  <  SRR4302543.941803/94‑1 (MQ=60)

                            CTGCGTGTAGCTCCTGCTTTGAAACTTCATTGGCTTGCACCGTTGGACGGTCTACCAGTTTGGTGGCGCCACAACGATAATCCAGCAGATGCTG                                                                 >  SRR4302543.4619820/1‑94 (MQ=60)

                            CTGCGTGTAGCTCCTGCTTTGAAACTTCATTGGCTTGCACCGTTGGACGGTCTACCAGTTTGGTGGCGCCACAACGATAATCCAGCAGATGCTG                                                                 >  SRR4302543.105405/1‑94 (MQ=60)

                            CTGCGTGTAGCTCCTGCTTTGAAACTTCATTGGCTTGCACCGTTGGACGGTCTACCAGTTTGGTGGCGCCACAACGATAATCCAGCAGATGCTG                                                                 <  SRR4302543.2813606/94‑1 (MQ=60)

                            CTGCGTGTAGCTCCTGCTTTGAAACTTCATTGGCTTGCACCGTTGGACGGTCTACCAGTTTGGTGGCGCCACAACGATAATCCAGCAGATGCTG                                                                 >  SRR4302543.2432615/1‑94 (MQ=60)

                            CTGCGTGTAGCTCCTGCTTTGAAACTTCATTGGCTTGCACCGTTGGACGGTCTACCAGTTTGGTGGCGCCACAACGATAATCCAGCAGATGCTG                                                                 >  SRR4302543.2249246/1‑94 (MQ=60)

                            CTGCGTGTAGCTCCTGCTTTGAAACTTCATTGGCTTGCACCGTTGGACGGTCTACCAGTTTGGTGGCGCCACAACGATAATCCAGCAGATGCTG                                                                 <  SRR4302543.7341018/94‑1 (MQ=60)

                              GCGTGTAGCTCCTGCTTTGAAACTTCATTGGCTTGCACCGTTGGACGGTCTACCAGTTTGGTGGCGCCACAACGATAATCCAGCAGATGCTGTG                                                               <  SRR4302543.1345735/94‑1 (MQ=60)

                                GTGTAGCTCCTGCTTTGAAACTTCATTGGCTTGCACCGTTGGACGGTCTACCAGTTTGGTGGCGCCACAACGATAATCCAGCAGATGCTGTGCC                                                             <  SRR4302543.4541439/94‑1 (MQ=60)

                                GTGTAGCTCCTGCTTTGAAACTTCATTGGCTTGCACCGTTGGACGGTCTACCAGTTTGGTGGCGCCACAACGATAATCCAGCAGATGCTGTGCC                                                             <  SRR4302543.4225532/94‑1 (MQ=60)

                                 TGTAGCTCCTGCTTTGAAACTTCATTGGCTTGCACCGTTGGACGGTCTACCAGTTTGGTGGCGCCACAACGATAATCCAGCAGATGCTGTGCCT                                                            >  SRR4302543.5193666/1‑94 (MQ=60)

                                  GTAGCTCCTGCTTTGAAACTTCATTGGCTTGCACCGTTGGACGGTCTACCAGTTTGGTGGCGCCACAACGATAATCCAGCAGATGCTGTGCCTC                                                           <  SRR4302543.4695468/94‑1 (MQ=60)

                                  GTAGCTCCTGCTTTGAAACTTCATTGGCTTGCACCGTTGGACGGTCTACCAGTTTGGTGGCGCCACAACGATAATCCAGCAGATGCTGTGCCTC                                                           <  SRR4302543.4695469/94‑1 (MQ=60)

                                   TAGCTCCTGCTTTGAAACTTCATTGGCTTGCACCGTTGGACGGTCTACCAGTTTGGTGGCGCCACAACGATAATCCAGCAGATGCTGTGCCTCC                                                          >  SRR4302543.5974587/1‑94 (MQ=60)

                                    AGCTCCTGCTTTGAAACTTCATTGGCTTGCGCCGTTGGACGGTCTACCAGTTTGGTGGCGCCACAACGATAATCCAGCAGATGCTGTGCCTCCT                                                         <  SRR4302543.7879737/94‑1 (MQ=60)

                                    AGCTCCTGCTTTGAAACTTCATTGGCTTGCACCGTTGGACGGTCTACCAGTTTGGTGGCGCCACAACGATAATCCAGCAGATGCTGTGCCTCCT                                                         >  SRR4302543.6957887/1‑94 (MQ=60)

                                    AGCTCCTGCTTTGAAACTTCATTGGCTTGCACCGTTGGACGGTCTACCAGTTTGGTGGCGCCACAACGATAATCCAGCAGATGCTGTGCCTCCT                                                         >  SRR4302543.591368/1‑94 (MQ=60)

                                      CTCCTGCTTTGAAACTTCATTGGCTTGCACCGTTGGACGGTCTACCAGTTTGGTGGCGCCACAACGATAATCCAGCAGATGCTGTGCCTCCTGC                                                       <  SRR4302543.3277720/94‑1 (MQ=60)

                                      CTCCTGCTTTGAAACTTCATTGGCTTGCACCGTTGGACGGTCTACCAGTTTGGTGGCGCCACAACGATAATCCAGCAGATGCTGTGCCTCCTGC                                                       >  SRR4302543.864016/1‑94 (MQ=60)

                                      CTCCTGCTTTGAAACTTCATTGGCTTGCACCGTTGGACGGTCTACCAGTTTGGTGGCGCCACAACGATAATCCAGCAGATGCTGTGCCTCCTGC                                                       <  SRR4302543.5229961/94‑1 (MQ=60)

                                      CTCCTGCTTTGAAACTTCATTGGCTTGCACCGTTGGACGGTCTACCAGTTTGGTGGCGCCACAACGATAATCCAGCAGATGCTGTGCCTCCTGC                                                       >  SRR4302543.7751130/1‑94 (MQ=60)

                                      CTCCTGCTTTGAAACTTCATTGGCTTGCACCGTTGGACGGTCTACCAGTTTGGTGGCGCCACAACGATAATCCAGCAGATGCTGTGCCTCCTGC                                                       >  SRR4302543.7510949/1‑94 (MQ=60)

                                      CTCCTGCTTTGAAACTTCATTGGCTTGCACCGTTGGACGGTCTACCAGTTTGGTGGCGCCACAACGATAATCCAGCAGATGCTGTGCCTCCTGC                                                       >  SRR4302543.6969625/1‑94 (MQ=60)

                                      CTCCTGCTTTGAAACTTCATTGGCTTGCACCGTTGGACGGTCTACCAGTTTGGTGACGCCACAACGATAATCCAGCAGATGCTGTGCCTCCTGC                                                       >  SRR4302543.6969624/1‑94 (MQ=60)

                                      CTCCTGCTTTGAAACTTCATTGGCTTGCACCGTTGGACGGTCTACCAGTTTGGGGGCGCCACACCGATCATCCAGCAGCTGCTGTGCCTCCTGG                                                       >  SRR4302543.864017/1‑94 (MQ=60)

                                        CCTGCTTTGAAACTTCATTGGCTTGCACCGTTGGACGGTCTACCAGTTTGGTGGCGCCACAACGATAATCCAGCAGATGCTGTGCCTCCTGCGG                                                     >  SRR4302543.5278186/1‑94 (MQ=60)

                                        CCTGCTTTGAAACTTCATTGGCTTGCACCGTTGGACGGTCTACCAGTTTGGTGGCGCCACAACGATAATCCAGCAGATGCTGTGCCTCCTGCGG                                                     >  SRR4302543.7534830/1‑94 (MQ=60)

                                         CTGCTTTGAAACTTCATTGGCTTGCACCGTTTGACGGTCTACCAGGTTGGGGGCGCCACAACGATAATCCACCAGACGCCGTGCCTCCTGCGGC                                                    >  SRR4302543.5551881/1‑94 (MQ=60)

                                         CTGCTTTGAAACTTCATTGGCTTGCACCGTTGGACGGTCTACCAGTTTGGTGGCGCCACAACGATAATCCAGCAGATGCTGTGCCTCCTGCGGC                                                    >  SRR4302543.1293774/1‑94 (MQ=60)

                                          TGCTTTGAAACTTCATTGGCTTGCACCGTTGGACGGTCTACCAGTTTGGTGGCGCCACAACGATAATCCAGCAGATGCTGTGCCTCCTGCGGCT                                                   >  SRR4302543.1145155/1‑94 (MQ=60)

                                            CTTTGAAACTTCATTGGCTTGCACCGTTGGACGGTCTACCAGTTTGGTGGCGCCACAACGATAATCCAGCAGATGCTGTGCCTCCTGCGGCTTC                                                 >  SRR4302543.7595894/1‑94 (MQ=60)

                                            CTTTGAAACTTCATTGGCTTGCACCGTTGGACGGTCTACCAGTTTGGTGGCGCCACAACGATAATCCAGCAGATGCTGTGCCTCCTGCGGCTTC                                                 >  SRR4302543.7044181/1‑94 (MQ=60)

                                            CTTTGAAACTTCATTGGCTTGCACCGTTGGACGGTCTACCAGTTTGGTGGCGCCACAACGATAATCCAGCAGATGCTGTGCCTCCTGCGGCTTC                                                 >  SRR4302543.6713361/1‑94 (MQ=60)

                                             TTTGAAACTTCATTGGCTTGCACCGTTGGACGGTCTACCAGTTTGGTGGCGCCACAACGATAATCCAGCAGATGCTGTGCCTCCTGCGGCTTCA                                                >  SRR4302543.1785979/1‑94 (MQ=60)

                                               TGAAACTTCATTGGCTTGCACCGTTGGACGGTCTACCAGTTTGGTGGCGCCACAACGATAATCCAGCAGATGCTGTGCCTCCTGCGGCTTCAAC                                              >  SRR4302543.412216/1‑94 (MQ=60)

                                               TGAAACTTCATTGGCTTGCACCGTTGGACGGGCTACCAGGTTGGGGGCGCCGCAACGATAATCCAGCAGATGCTGTGCCTCCTGCGGCTTaaaa                                              >  SRR4302543.6268140/1‑90 (MQ=60)

                                                GAAACTTCATTGGCTTGCCCCGTTGGACGGTCTACCAGTTTGGTGGCGCCCCAACGATAATCCAGCAGATGCTGTGCCTCCTGCGGCTTCAACT                                             <  SRR4302543.987471/94‑1 (MQ=60)

                                                GAAACTTCATTGGCTTGCACCGTTGGACGGTCTACCAGTTTGGTGGCGCCACAACGATAATCCAGCAGATGCTGTGCCTCCTGCGGCTTCAACT                                             <  SRR4302543.987470/94‑1 (MQ=60)

                                                GAAACTTCATTGGCTTGCACCGTTGGACGGTCTACCAGTTTGGTGGCGCCACAACGATAATCCAGCAGATGCTGTGCCTCCTGCGGCTTCAACT                                             <  SRR4302543.959013/94‑1 (MQ=60)

                                                 GAACTTCATTGGCTTGAACCGTTGGACGGTCTACCAGTTTGGTGGCGCCACAACGATAATCCAGCAGATGCTGTGCCTCCTGCGGCTTCAACTG                                            <  SRR4302543.7112843/94‑1 (MQ=60)

                                                 AAACTTCATTGGCTTGCACCGTTGGACGGTCTACCAGTTTGGTGGCGCCACAACGATAATCCAGCAGATGCTGTGCCTCCTGCGGCTTCAACTG                                            <  SRR4302543.3037693/94‑1 (MQ=60)

                                                 AAACTTCATTGGCTTGCACCGTTGGACGGTCTACCAGTTTGGTGGCGCCACAACGATAATCCAGCAGATGCTGTGCCTCCTGCGGCTTCAACTG                                            <  SRR4302543.7112842/94‑1 (MQ=60)

                                                 AAACTTCATTGGCTTGCACCGTTGGACGGTCTACCAGTTTGGTGGCGCCACAACGATAATCCAGCAGATGCTGTGCCTCCTGCGGCTTCAACTG                                            >  SRR4302543.1782042/1‑94 (MQ=60)

                                                 AAACTTCATTGGCTTGCACCGTTGGACGGTCTACCAGGTTGGTGGCGCCACAACGATAATTCAGCAGATGCTGTGCCTCCTGCGGCTTCAACTG                                            >  SRR4302543.2386009/1‑94 (MQ=60)

                                                  AACTTCATTGGCTTGCACCGTTGGACGGTCTACCAGTTTGGTGGCGCCACAACGATAATCCAGCAGATGCTGTGCCTCCTGCGGCTTCAACTGA                                           >  SRR4302543.1736235/1‑94 (MQ=60)

                                                   ACTTCATTGGCTTGCACCGTTGGACGGTCTACCAGTTTGGTGGCGCCACAACGATAATCCAGCAGATGCTGTGCCTCCTGCGGCTTCAACTGAC                                          >  SRR4302543.7229817/1‑94 (MQ=60)

                                                     TTCATTGGCTTGCACCGTTGGACGGTCTACCAGTTTGGTGGCGCCACAACGATAATCCAGCAGATGCTGTGCCTCCTGCGGCTTCAACTGACGG                                        <  SRR4302543.3443382/94‑1 (MQ=60)

                                                      TCATTGGCTTGCACCGTTGGACGGTCTACCAGTTTGGTGGCGCCACAACGATAATCCAGCAGATGCTGTGCCTCCTGCGGCTTCAACTGACGGT                                       <  SRR4302543.7050725/94‑1 (MQ=60)

                                                      TCATTGGCTTGCACCGTTGGACGGTCTACCAGTTTGGTGGCGCCACAACGATAATCCAGCAGATGCTGTGCCTCCTGCGGCTTCAACTGACGGT                                       <  SRR4302543.1802760/94‑1 (MQ=60)

                                                       TATTGGCTTGCACCGTTGGACGGTCTACCAGTTTGGTGGCGCCACAACGATAATCCAGCAGATGCTGTGCCTCCTGCGGCTTCAACTGACGGTC                                      <  SRR4302543.1875762/94‑1 (MQ=60)

                                                       CATTGGCTTGCACCGTTGGACGGTCTACCAGTTTGGTGGCGCCACAACGATAATCCAGCAGATGCTGTGCCTCCTGCGGCTTCAACTGACGGTC                                      >  SRR4302543.6884871/1‑94 (MQ=60)

                                                        ATTGGCTTGCACCGTTGGACGGTCTACCAGTTTGGTGGCGCCACAACGATAATCCAGCAGATGCTGTGCCTCCTGCGGCTTCAACTGACGGTCG                                     >  SRR4302543.4954503/1‑94 (MQ=60)

                                                        ATTGGCTTGCACCGTTGGACGGTCTACCAGTTTGGTGGCGCCACAACGATAATCCAGCAGATGCTGTGCCTCCTGCGGCTTCAACTGACGGTCG                                     <  SRR4302543.7426403/94‑1 (MQ=60)

                                                        ATTGGCTTGCACCGTTGGACGGTCTACCAGTTTGGTGGCGCCACAACGATAATCCAGCAGATGCTGTGCCTCCTGCGGCTTCAACTGACGGTCG                                     >  SRR4302543.873201/1‑94 (MQ=60)

                                                        ATTGGCTTGCACCGTTGGACGGTCTACCAGTTTGGTGGCGCCACAACGATAATCCAGCAGATGCTGTGCCTCCTGCGGCTTCAACTGACGGTCG                                     >  SRR4302543.1273205/1‑94 (MQ=60)

                                                         TTGGCTTGCACCGTTGGACGGTCTACCAGTTTGGTGGCGCCACAACGATAATCCAGCAGATGCTGTGCCTCCTGCGGCTTCAACTGACGGTCGG                                    >  SRR4302543.5012008/1‑94 (MQ=60)

                                                          TGGCTTGCACCGTTGGACGGTCTGCCAGTTTGGTGGCGCCACAACGATAATCCAGCAGATGCTGTGCCTCCTGCGGCTTCAACTGACGGTCGGT                                   <  SRR4302543.2204247/94‑1 (MQ=60)

                                                           GGCTTGCACCGTTGGACGGTCTACCAGTTTGGTGGCGCCACAACGATAATCCAGCAGATGCTGTGCCTCCTGCGGCTTCAACTGACGGTCGGTA                                  >  SRR4302543.1676300/1‑94 (MQ=60)

                                                           GGCTTGCACCGTTGGACGGTCTACCAGTTTGGTGGCGCCACAACGATAATCCAGCAGATGCTGTGCCTCCTGCGGCTTCAACTGACGGTCGGTA                                  >  SRR4302543.3045381/1‑94 (MQ=60)

                                                           GGCTTGCACCGTTGGACGGTCTACCAGTTTGGTGGCGCCACAACGATAATCCAGCAGATGCTGTGCCTCCTGCGGCTTCAACTGACGGTCGGTA                                  >  SRR4302543.1157066/1‑94 (MQ=60)

                                                            GCTTGCACCGTTGGACGGTCTACCAGTTTGGTGGCGCCACAACGATAATCCAGCAGATGCTGTGCCTCCTGCGGCTTCAACTGACGGTCGGTAA                                 <  SRR4302543.577089/94‑1 (MQ=60)

                                                            GCTTGCACCGTTGGACGGTCTACCAGTTTGGTGGCGCCACAACGATAATCCAGCAGATGCTGTGCCTCCTGCGGCTTCAACTGACGGTCGGTAA                                 >  SRR4302543.3048250/1‑94 (MQ=60)

                                                             CTTGCACCGTTGGACGGTCTGCCAGTTTGGTGGCGCCACAACGATAATCCAGCAGATGCTGTGCCTCCTGCGGCTTCAACTGACGGTCGGTAAA                                <  SRR4302543.1522577/94‑1 (MQ=60)

                                                             CTTGCACCGTTGGACGGTCTACCAGTTTGGTGGCGCCACAACGATAATCCAGCAGATGCTGTGCCTCCTGCGGCTTCAACTGACGGTCGGTAAA                                >  SRR4302543.562697/1‑94 (MQ=60)

                                                             CTTGCACCGTTGGACGGTCTACCAGTTTGGTGGCGCCACAACGATAATCCAGCAGATGCTGTGCCTCCTGCGGCTTCAACTGACGGTCGGTAAA                                >  SRR4302543.230336/1‑94 (MQ=60)

                                                                GCACCGTTGGACGGTCTACCAGTTTGGTGGCGCCACAACGATAATCCAGCAGATGCTGTGCCTCCTGCGGCTTCAACTGACGGTCGGTAAACCC                             >  SRR4302543.23936/1‑94 (MQ=60)

                                                                GCACCGTTGGACGGTCTACCAGTTTGGTGGCGCCACAACGATAATCCAGCAGATGCTGTGCCTCCTGCGGCTTCAACTGACGGTCGGTAAACCC                             >  SRR4302543.5002153/1‑94 (MQ=60)

                                                                GCACCGTTGGACGGTCTACCAGTTTGGTGGCGCCACAACGATAATCCAGCAGATGCTGTGCCTCCTGCGGCTTCAACTGACGGTCGGTAAACCC                             <  SRR4302543.3390366/94‑1 (MQ=60)

                                                                GCACCGTTGGACGGTCTACCAGTTTGGTGGCGCCACAACGATAATCCAGCAGATGCTGTGCCTCCTGCGGCTTCAACTGACGGTCGGTAAACCC                             >  SRR4302543.1515953/1‑94 (MQ=60)

                                                                GCACCGTTGGACGGTCTACCAGTTTGGTGGCGCCACAACGATAATCCAGCAGATGCTGTGCCTCCTGCGGCTTCAACTGACGGTCGGTAAACCC                             <  SRR4302543.5076126/94‑1 (MQ=60)

                                                                 CACCGTTGGACGGTCTACCAGTTTGGTGGCGCCACAACGATAATCCAGCAGATGCTGTGCCTCCTGCGGCTTCAACTGACGGTCGGTAAACCCG                            <  SRR4302543.4595648/94‑1 (MQ=60)

                                                                  ACCGTTGGACGGTCTACCAGTTTGGTGGCGCCACAACGATAATCCAGCAGATGCTGTGCCTCCTGCGGCTTCAACTGACGGTCGGTAAACCCGG                           <  SRR4302543.7679854/94‑1 (MQ=60)

                                                                  ACCGTTGGACGGTCTACCAGTTTGGTGGCGCCACAACGATAATCCAGCAGATGCTGTGCCTCCTGCGGCTTCAACTGACGGTCGGTAAACCCGG                           >  SRR4302543.4229608/1‑94 (MQ=60)

                                                                  ACCGTTGGACGGTCTACCAGTTTGGTGGCGCCACAACGATAATCCAGCAGATGCTGTGCCTCCTGCGGCTTCAACTGACGGTCGGTAAACCCGG                           >  SRR4302543.734696/1‑94 (MQ=60)

                                                                   CCGTTGGACGGTCTACCAGTTTGGTGGCGCCACAACGATAATCCAGCAGATGCTGTGCCTCCTGCGGCTTCAACTGACGGTCGGTAAACCCGGC                          <  SRR4302543.7504879/94‑1 (MQ=60)

                                                                    CGTTGGACGGTCTACCAGTTTGGTGGCGCCACAACGATAATCCAGCAGATGCTGTGCCTCCTGCGGCTTCAACTGACGGTCGGTAAACCCGGCC                         >  SRR4302543.1181582/1‑94 (MQ=60)

                                                                    CGTTGGACGGTCTACCAGTTTGGTGGCGCCACAACGATAATCCAGCAGATGCTGTGCCTCCTGCGGCTTCAACTGACGGTCGGTAAACCCGGCC                         >  SRR4302543.1492581/1‑94 (MQ=60)

                                                                     GTTGGACGGTCTACCAGTTTGGTGGCGCCACAACGATAATCCAGCAGATGCTGTGCCTCCTGCGGCTTCAACTGACGGTCGGTAAACCCGGCCT                        >  SRR4302543.3734776/1‑94 (MQ=60)

                                                                     GTTGGACGGTCTACCAGTTTGGTGGCGCCACAACGATAATCCAGCAGATGCTGTGCCTCCTGCGGCTTCAACTGACGGTCGGTAAACCCGGCCT                        <  SRR4302543.7994813/94‑1 (MQ=60)

                                                                     GTTGGACGGTCTACCAGTTTGGTGGCGCCACAACGATAATCCAGCAGATGCTGTGCCTCCTGCGGCTTCAACTGACGGTCGGTAAACCCGGCCT                        <  SRR4302543.2133622/94‑1 (MQ=60)

                                                                     GTTGGACGGTCTACCAGTTTGGTGGCGCCACAACGATAATCCAGCAGATGCTGTGCCTCCTGCGGCTTCAACTGACGGTCGGTAAACCCGGCCT                        >  SRR4302543.330335/1‑94 (MQ=60)

                                                                     GTTGGACGGTCTACCAGTTTGGTGGCGCCACAACGATAATCCAGCAGATGCTGTGCCTCCTGCGGCTTCAACTGACGGTCGGTAAACCCGGCCT                        <  SRR4302543.7420170/94‑1 (MQ=60)

                                                                     GTTGGACGGTCTACCAGTTTGGTGGCGCCACAACGATAATCCAGCAGATGCTGTGCCTCCTGCGGCTTCAACTGACGGTCGGTAAACCCGGCCT                        <  SRR4302543.3882541/94‑1 (MQ=60)

                                                                     GTTGGACGGTCTACCAGTTTGGTGGCGCCACAACGATAATCCAGCAGATGCTGTGCCTCCTGCGGCTTCAACTGACGGTCGGTAAACCCGGCCT                        <  SRR4302543.7420169/94‑1 (MQ=60)

                                                                       TGGACGGTCTACCAGTTTGGTGGCGCCACAACGATAATCCAGCAGATGCTGTGCCTCCTGCGGCTTCAACTGACGGTCGGTAAACCCGGCCTGA                      >  SRR4302543.2523548/1‑94 (MQ=60)

                                                                       TGGACGGTCTACCAGTTTGGTGGCGCCACAACGATAATCCAGCAGATGCTGTGCCTCCTGCGGCTTCAACTGACGGTCGGTAAACCCGGCCTGA                      <  SRR4302543.5471652/94‑1 (MQ=60)

                                                                       TGGACGGTCTACCAGTTGTGTGGCCCCACAACGATAATCCAGCAGATGCTGTGCCTCCTGCGGCTTCAACTGACGGTCGGTAAACCCGGCCTGA                      <  SRR4302543.5471772/94‑1 (MQ=60)

                                                                        GGACGGTCTACCAGTTTGGTGGCGCCACAACGATAATCCAGCAGATGCTGTGCCTCCTGCGGCTTCAACTGACGGTCGGTAAACCCGGCCTGAT                     >  SRR4302543.7826757/1‑94 (MQ=60)

                                                                         GACGGTCTACCAGTTTGGTGGCGCCACAACGATAATCCAGCAGATGCTGTGCCTCCTGCGGCTTCAACTGACGGTCGGTAAACCCGGCCTGATA                    <  SRR4302543.7552915/94‑1 (MQ=60)

                                                                         GACGGGCTACCAGTTTGGTGGCGCCACAACGATAATCCAGCAGATGCTGTGCCTCCTGCGGCTTCAACTGACGGTCGGTAAACCCGGCCTGATA                    <  SRR4302543.7552914/94‑1 (MQ=60)

                                                                          GCGGTCTACCAGTTTTGTGGCGCCACAACGATAATCCAGCAGATGCTGTGCCTCCTGCGGCTTCAACTGACGGTCGGTAAACCCGGCCTGATAT                   <  SRR4302543.1977469/94‑1 (MQ=60)

                                                                          ACGGTCTACCAGTTTGGTGGCGCCACAACGATAATCCAGCAGATGCTGTGCCTCCTGCGGCTTCAACTGACGGTCGGTAAACCCGGCCTGATAT                   <  SRR4302543.3206159/94‑1 (MQ=60)

                                                                          ACGGTCTACCAGTTTGGTGGCGCCACAACGATAATCCAGCAGATGCTGTGCCTCCTGCGGCTTCAACTGACGGTCGGTAAACCCGGCCTGATAT                   <  SRR4302543.6920136/94‑1 (MQ=60)

                                                                          ACGGTCTACCAGTTTGGTGGCGCCACAACGATAATCCAGCAGATGCTGTGCCTCCTGCGGCTTCAACTGACGGTCGGTAAACCCGGCCTGATAT                   <  SRR4302543.752092/94‑1 (MQ=60)

                                                                          ACGGTCTACCAGTTTGGTGGCGCCACAACGATAATCCAGCAGATGCTGTGCCTCCTGCGGCTTCAACTGACGGTCGGTAAACCCGGCCTGATAT                   <  SRR4302543.7840894/94‑1 (MQ=60)

                                                                          ACGGTCTACCAGTTTGGTGGCGCCACAACGATAATCCAGCAGATGCTGTGCCTCCTGCGGCTTCAACTGACGGTCGGTAAACCCGGCCTGATAT                   <  SRR4302543.6706549/94‑1 (MQ=60)

                                                                           CGGTCTACCAGTTTGGTGGCACCACAACGATAATCCAGCAGATGCTGTGCCTCCTGCGGCTTCAACTGACGGTCGGTAAACCCGGCCTGATATA                  >  SRR4302543.6436500/1‑94 (MQ=60)

                                                                            GGTCTACCAGTTTGGTGGCGCCACAACGATAATCCAGCAGATGCTGTGCCTCCTGCGGCTTCAACTGACGGTCGGTAAACCCGGCCTGATATAT                 >  SRR4302543.3500641/1‑94 (MQ=60)

                                                                            GGTCTACCAGTTTGGTGGCGCCACAACGATAATCCAGCAGATGCTGTGCCTCCTGCGGCTTCAACTGACGGTCGGTAAACCCGGCCTGATATAT                 >  SRR4302543.7971072/1‑94 (MQ=60)

                                                                             GTCTACCAGTTTGGTGGCGCCACAACGATAATCCAGCAGATGCTGTGCCTCCTGCGGCTTCAACTGACGGTCGGTAAACCCGGCCTGATATATC                <  SRR4302543.1343602/94‑1 (MQ=60)

                                                                              TCTACCAGTTTGGTGGCGCCACAACGATAATCCAGCAGATGCTGTGCCTCCTGCGGCTTCAACTGACGGTCGGTAAACCCGGCCTGATATATCA               >  SRR4302543.7984520/1‑94 (MQ=60)

                                                                               CTACCAGTTTGGTGGCGCCACAACGATAATCCAGCAGATGCTGTGCCTCCTGCGGCTTCAACTGACGGTCGGTAAACCCGGCCTGATATATCAC              >  SRR4302543.1222465/1‑94 (MQ=60)

                                                                               CTACCAGTTTGGTGGCGCCACAACGATAATCCAGCAGATGCTGTGCCTCCTGCGGCTTCAACTGACGGTCGGTAAACCCGGCCTGATATATCAC              <  SRR4302543.3501228/94‑1 (MQ=60)

                                                                               CTACCAGTTTGGTGGCGCCACAACGATAATCCAGCAGATGCTGTGCCTCCTGCGGCTTCAACTGACGGTCGGTAAACCCGGCCTGATATATCAC              <  SRR4302543.1467216/94‑1 (MQ=60)

                                                                                 ACCAGTTTGGTGGCGCCACAACGATAATCCAGCAGATGCTGTGCCTCCTGCGGCTTCAACTGACGGTCGGTAAACCCGGCCTGATATATCACCT            <  SRR4302543.4282278/94‑1 (MQ=60)

                                                                                  CCAGTTTGGTGGCGCCACAACGATAATCCAGCAGATGCTGTGCCTCCTGCGGCTTCAACTGACGGTCGGTAAACCCGGCCTGATATATCACCTT           >  SRR4302543.5351117/1‑94 (MQ=60)

                                                                                    AGTTTGGTGGCGCCACAACGATAATCCAGCAGATGCTGTGCCTCCTGCGGCTTCAACTGACGGTCGGTAAACCCGGCCTGATATATCACCTTCC         >  SRR4302543.7369779/1‑94 (MQ=60)

                                                                                    AGTTTGGTGGCGCCACAACGATAATCCAGCAGATGCTGTGCCTCCTGCGGCTTCAACTGACGGTCGGTAAACCCGGCCTGATATATCACCTTCC         <  SRR4302543.7203065/94‑1 (MQ=60)

                                                                                    AGTTTGGTGGCGCCACAACGATAATCCAGCAGATGCTGTGCCTCCTGCGGCTTCAACTGACGGTCGGTAAACCCGGCCTGATATATCACCTTCC         >  SRR4302543.1947832/1‑94 (MQ=60)

                                                                                     GTTTGGTGGCGCCACAACGATAATCCAGCAGATGCTGTGCCTCCTGCGGCTTCAACTGACGGTCGGTAAACCCGGCCTGATATATCACCTTCCA        >  SRR4302543.1555952/1‑94 (MQ=60)

                                                                                     GTTTGGTGGCGCCACAACGATAATCCAGCAGATGCTGTGCCTCCTGCGGCTTCAACTGACGGTCGGTAAACCCGGCCTGATATATCACCTTCCA        >  SRR4302543.3194239/1‑94 (MQ=60)

                                                                                      TTTGGTGGCGCCACAACGATAATCCAGCAGATGCTGTGCCTCCTGCGGCTTCAACTGACGGTCGGTAAACCCGGCCTGATATATCACCTTCCAG       <  SRR4302543.3380029/94‑1 (MQ=60)

                                                                                      TTTGGTGGCGCCACAACGATAATCCAGCAGATGCTGTGCCTCCTGCGGCTTCAACTGACGGTCGGTAAACCCGGCCTGATATATCACCTTCCAG       <  SRR4302543.5341002/94‑1 (MQ=60)

                                                                                         GGTGGGGCCACAACAATAATCCAGCAGATTCTGGGGCTCCTGCGGCTGCAACTGACGGTCGGTAAACCCGGCCTAATATATCACCTTCCAGAAG    <  SRR4302543.6502447/94‑1 (MQ=60)

                                                                                         GGTGGCGCCACAACGATAATCCAGCAGATGCTGTGCCTCCTGCGGCTTCAACTGACGGTCGGTAAACCCGGCCTGATATATCACCTTCCAGAAG    >  SRR4302543.3927779/1‑94 (MQ=60)

                                                                                         GGTGGCGCCACAACGATAATCCAGCAGATGCTGTGCCTCCTGCGGCTTCAACTGACGGTCGGTAAACCCGGCCTGATATATCACCTTCCAGAAG    >  SRR4302543.3927978/1‑94 (MQ=60)

                                                                                         GGTGGCGCCACAACGATAATCCAGCAGATGCTGTGCCTCCTGCGGCTTCAACTGACGGTCGGTAAACCCGGCCTGATATATCACCTTCCAGAAG    >  SRR4302543.2876171/1‑94 (MQ=60)

                                                                                         GGTGGCGCCACAACGATAATCCAGCAGATGCTGGGCCTCCTGCGGCTTCAACTGACGGTCGGTAAACCCGGCCTGATATATCACCTTCCAGAAG    <  SRR4302543.2654417/94‑1 (MQ=60)

                                                                                           TGGCGCCACAACGATAATCCAGCAGATGCTGTGCCTCCTGCGGCTTCAACTGACGGTCGGTAAACCCGGCCTGATATATCACCTTCCAGAAGCG  <  SRR4302543.621550/94‑1 (MQ=60)

TCAATTTTTTCAATCAGCTTACGCCCGCCTGCGTGTAGCTCCTGCTTTGAAACTTCATTGGCTTGCACCGTTGGACGGTCTACCAGTTTGGTGACGCCACAACGATAATCCAGCAGATGCTGTGCCTCCTGCGGCTTCAACTGACGGTCGGTAAACCCGGCCTGATATATCACCTTCCAGAAGCG  >  NC_000913/3212825‑3213009

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 0 ≤` `ATCG/ATCG` `< 2 ≤` `ATCG/ATCG` `< 24 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`