Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.

ALE, Flask, Isolate	Predicted Mutations	Mean Coverage	Total Reads	Percent Mapped	Mapped Reads	Average Read Length
A1 F1 I1 R1	1696	279.3	15874187	97.8%	15524954	93.0

Breseq alignment

BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	3,224,926	+C	coding (1052/1434 nt)	ygjI →	putative oxidoreductase

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	3,224,924	1	.	C	99.7%	1085.1 / ‑4.7	341	coding (1050/1434 nt)	ygjI	putative oxidoreductase
Reads supporting (aligned to +/- strand): ref base . (0/1); new base C (150/190); total (150/191)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 363 total aligned reads displayed.

TTTGGTAAGAAAACCGTCGAACTGAACGAAAACGGCGTTCCGGCGCGGCGCAGCGTGGATCCAGTTCCTGATCGTCATCCCGCTGATGATTAT‑CCGATGCTCGGTTCCAATACCGTGCAGGATCTGATGAATACTATTATTAATATGACCGCCGCAGCGTCCATGCTTCCGCCGTTATTC  >  NC_000913/3224832‑3225011

  tGGTAAGAAAACCGTCGAACTGAACGAAAACGGCGTTCCGGCGC‑GCGCAGCGTGGATCCAGTTCCTGATCGTCATCCCGCTGATGATTAtacc                                                                                       >  2:4496392/1‑90 (MQ=255)

   ggTAAGAAAACCGTCGAACTGAACGAAAACGGCGTTCCGGCGC‑GCGCAGCGTGGATCCAGTTCCTGATCGTCATCCCGCTGATGATTAT‑cccg                                                                                     >  1:4013604/1‑91 (MQ=255)

    gTAAGAAAACCGTCGAACTGAACGAAAACGGCGTTCCGGCGC‑GCGCAGCGTGGATCCAGTTCCTGATCGTCATCCCGCTGATGATTAT‑cccga                                                                                    <  1:2341376/93‑4 (MQ=255)

        gAAAACCGTCGAACTGAACGAAAACGGCGTTCCGGCGC‑GCGCAGCGTGGATCCAGTTCCTGATCGTCATCCCGCTGATGATTATCCCGATGCt                                                                                 >  2:1449825/1‑93 (MQ=255)

         aaaaCCGTCGAACTGAACGAAAACGGCGTTCCGGCGC‑GCGCAGCGTGGATCCAGTTCCTGATCGTCATCCCGCTGATGATTATCCCGATGCTc                                                                                >  2:3051926/1‑93 (MQ=255)

           aaCCGTCGAACTGAACGAAAACGGCGTTCCGGCGC‑GCGCAGCGTGGATCCAGTTCCTGATCGTCATCCCGCTGATGATTATCCCGATGCTCgg                                                                              >  1:3517955/1‑93 (MQ=255)

            aCCGTCGAACTGAACGAAAACGGCGTTCCGGCGC‑GCGCAGCGTGGATCCAGTTCCTGATCGTCATCCCGCTGATGATTATCCCGATGCTCGGt                                                                             >  2:1003729/1‑93 (MQ=255)

             ccGTCGAACTGAACGAAAACGGCGTTCCGGCGC‑GCGCAGCGTGGATCCAGTTCCTGATCGTCATCCCGCTGATGATTATCCCGATGCTCGGtt                                                                            >  1:6388806/1‑93 (MQ=255)

              cGTCGAACTGAACGAAAACGGCGTTCCGGCGC‑GCGCAGCGTGGATCCAGTTCCTGATCGTCATCCCGCTGATGATTATCCCGATGCTCGGTTc                                                                           <  1:6193662/93‑1 (MQ=255)

               gTCGAACTGAACGAAAACGGCGTTCCGGCGC‑GCGCAGCGTGGATCCAGTTCCTGATCGTCATCCCGCTGATGATTATCCCGATGCTCGGTTcc                                                                          <  2:4881487/93‑1 (MQ=255)

               gTCGAACTGAACGAAAACGGCGTTCCGGCGC‑GCGCAGCGTGGATCCAGTTCCTGATCGTCATCCCGCTGATGATTATCCCGATGCTCGGTTcc                                                                          <  2:7698823/93‑1 (MQ=255)

               gTCGAACTGAACGAAAACGGCGTTCCGGCGC‑GCGCAGCGTGGATCCAGTTCCTGATCGTCATCCCGCTGATGATTATCCCGATGCTCGGTTcc                                                                          >  2:7825793/1‑93 (MQ=255)

                 cGAACTGAACGAAAACGGCGTTCCGGCGC‑GCGCAGCGTGGATCCAGTTCCTGATCGTCATCCCGCTGATGATTATCCCGATGCTCGGTTCCaa                                                                        <  1:2842039/93‑1 (MQ=255)

                    aCTGAACGAAAACGGCGTTCCGGCGC‑GCGCAGCGTGGATCCAGTTCCTGATCGTCATCCCGCTGATGATTATCCCGATGCTCGGTTCCAATAc                                                                     <  1:5459730/93‑1 (MQ=255)

                    aCTGAACGAAAACGGCGTTCCGGCGC‑GCGCAGCGTGGATCCAGTTCCTGATCGTCATCCCGCTGATGATTATCCCGATGCTCGGTTCCAATAc                                                                     <  2:2992277/93‑1 (MQ=255)

                    aCTGAACGAAAACGGCGTTCCGGCGC‑GCGCAGCGTGGATCCAGTTCCTGATCGTCATCCCGCTGATGATTATCCCGATGCTCGGTTCCAATAc                                                                     <  1:6163080/93‑1 (MQ=255)

                    aCTGAACGAAAACGGCGTTCCGGCGC‑GCGCAGCGTGGATCCAGTTCCTGATCGTCATCCCGCTGAAGATTATCCCGATGCTCGGTTCCAATAc                                                                     <  2:7520908/93‑1 (MQ=255)

                     cTGAACGAAAACGGCGTTCCGGCGC‑GCGCAGCGTGGATCCAGTTCCTGATCGTCATCCCGCTGATGATTATCCCGATGCTCGGTTCCAATAcc                                                                    <  1:6026079/93‑1 (MQ=255)

                      agAACGAAAACGGCGTTCCGGCGC‑GCGCAGCGTGGATCCAGTTCCTGATCGTCATCCCGCTTATGATTATCCCGATGCTCGGTTCCAATACCg                                                                   <  2:6723804/92‑1 (MQ=255)

                       gAACGAAAACGGCGTTCCGGCGC‑GCGCAGCGTGGATCCAGTTCCTGATCGTCATCCCGCTGATGATTATCCCGATGCTCGGTTCCAATACCgg                                                                  >  2:7193846/1‑92 (MQ=255)

                       gAACGAAAACGGCGTTCCGGCGC‑GCGCAGCGTGGATCCAGTTCCTGATCGTCATCCCGCTGATGATTATCCCGATGCTCGGTTCCAATACCGt                                                                  >  2:1130777/1‑93 (MQ=255)

                         aCGAAAACGGCGTTCCGGCGC‑GCGCAGCGTGGATCCAGTTCCTGATCGTCATCCCGCTGATGATTATCCCGATGCTCGGTTCCAATACCGTGc                                                                >  1:3726279/1‑93 (MQ=255)

                         aCGAAAACGGCGTTCCGGCGC‑GCGCAGCGTGGATCCAGTTCCTGATCGTCATCCCGCTGATGATTATCCCGATGCTCGGTTCCAATACCGTGc                                                                <  1:4509534/93‑1 (MQ=255)

                          cGAAAACGGCGTTCCGGCGC‑GCGCAGCGTGGATCCAGTTCCTGATCGTCATCCCGCTGATGATTATCCCGATGCTCGGTTCCAATACCGTGCa                                                               <  2:5109574/93‑1 (MQ=255)

                           gAAAACGGCGTTCCGGCGC‑GCGCAGCGTGGATCCAGTTCCTGATCGTCCTCCCGCTGATGCTTATCCCGATGCTCGCTTCCCATACCGTGCAg                                                              >  1:6971652/1‑93 (MQ=255)

                           gAAAACGGCGTTCCGGCGC‑GCGCAGCGTGGATCCAGTTCCTGATCGTCATCCCGCTGATGATTATCCCGATGCTCGGTTCCAATACCGTGCAg                                                              <  1:633624/93‑1 (MQ=255)

                           gAAAACGGCGTTCCGGCGC‑GCGCAGCGTGGATCCAGTTCCTGATCGTCATCCCGCTGATGATTATCCCGATGCTCGGTTCCAATACCGTGCAg                                                              <  1:6064702/93‑1 (MQ=255)

                            aaaaCGGCGTTCCGGCGC‑GCGCAGCGTGGATCCAGTTCCTGATCGTCATCCCGCTGATGATTATCCCGATGCTCGGTTCCAATACCGTGCAgg                                                             >  1:2527955/1‑93 (MQ=255)

                             aaaCGGCGTTCCGGCGC‑GCGCAGCGTGGATCCAGTTCCTGATCGTCATCCCGCTGATGATTATCCCGATGCTCGGTTCCAATACCGTGCAGGa                                                            <  2:3183458/93‑1 (MQ=255)

                              aaCGGCGTTCCGGCGC‑GCGGAGCGTGGATCCAGTTCCTGATCGTCATCCCGCTGATGATTATCCCGATGCTCGGTTCCAATACCGTGCAGGAt                                                           >  1:7664498/1‑93 (MQ=255)

                              aaCGGCGTTCCGGCGC‑GCGCAGCGTGGATCCAGTTCCTGATCGTCATCCCGCTGATGATTATCCCGATGCTCGGTTCCAATACCGTGCAGGAt                                                           >  2:1482497/1‑93 (MQ=255)

                               aCGGCGTTCCGGCGC‑GCGCAGCGTGGATCCAGTTCCTGATCGTCATCCCGCTGATGATTATCCCGATGCTCGGTTCCAATACCGTGCAGGATc                                                          <  2:4397339/93‑1 (MQ=255)

                               aCGGCGTTCCGGCGC‑GCGCAGCGTGGATCCAGTTCCTGATCGTCATCCCGCTGATGATTATCCCGATGCTCGGTTCCAATACCGTGCAGGATc                                                          >  2:1297092/1‑93 (MQ=255)

                               aCGGCGTTCCGGCGC‑GCGCAGCGTGGATCCAGTTCCTGATCGTCATCCCGCTGATGATTATCCCGATGCTCGGTTCCAATACCGTGCAGGATc                                                          <  2:1722104/93‑1 (MQ=255)

                                 ggCGTTCCGGCGC‑GCGCAGCGTGGATCCAGTTCCTGATCGTCATCCCGCTGATGATTATCCCGATGCTCGGTTCCAATACCGTGCAGGATCtg                                                        >  1:100916/1‑93 (MQ=255)

                                 ggCGTTCCGGCGC‑GCGCAGCGTGGATCCAGTTCCTGATCGTCATCCCGCTGATGATTATCCCGATGCTCGGTTCCAATACCGTGCAGGATCtg                                                        <  2:4749222/93‑1 (MQ=255)

                                   cGTGCCGGCGC‑GCTCAGCGTGGATCCAGTTCCTGATCGTCATCCCGCTGATGATTATCCCGATGCTGGGTTCCAATGCCGTGCAGGATCtgat                                                      <  2:279330/93‑1 (MQ=255)

                                    gTTCCGGCGC‑GCGCAGCGTTGATCCAGTTCCTGATCGTCATCCCGCTGATGATTATCCCGATGCTCGGTTCCAATACCGTGCAGGATCtgatg                                                     <  1:5647937/93‑1 (MQ=255)

                                    gTTCCGGCGC‑GCGCAGCGTGGATCCAGTTCCTGATCGTCATCCCGCTGATGATTATCCCGATGCTCGGTTCCAATACCGTGCAGGATCtgatg                                                     <  2:3941375/93‑1 (MQ=255)

                                    gTTCCGGCGC‑GCGCAGCGTGGATCCAGTTCCTGATCGTCATCCCGCTGATGATTATCCCGATGCGCGGTTGCAATACCGTGGAGGATGtgatg                                                     >  1:1729269/1‑93 (MQ=255)

                                     ttCCGGCGC‑GCGCAGCGTGGATCCGGTTCCTGATCGTCATCCCGCTGATGATTATCCCGATGCTCGGTTCCAATACCGTGCAGGATCtgatga                                                    <  2:3822976/93‑1 (MQ=255)

                                     ttCCGGCGC‑GCGCAGCGTGGATCCAGTTCCTGATCGTCATCCCGCTGATGATTATCCCGATGCTCGGTTCCAATACCGTGCAGGATCtgatga                                                    >  2:6787022/1‑93 (MQ=255)

                                     ttCCGGCGC‑GCGCAGCGTGGATCCAGTTCCTGATCGTCATCCCGCTGATGATTATCCCGATGCTCGGTTCCAATACCGTGCAGGATCtgatga                                                    >  2:842897/1‑93 (MQ=255)

                                      tCCGGCGC‑GCGCAGCGTGGATCCAGTTCCTGATCGTCATCCCGCTGATGATTATCCCGATGCTCGGTTCCAATACCGTGCAGGATCTGATGaa                                                   <  1:1104455/93‑1 (MQ=255)

                                      tCCGGCGC‑GCGCAGCGTGGATCCAGTTCCTGATCGTCATCCCGCTGATGATTATCCCGATGCTCGGTTCCAATACCGTGCAGGATCTGATGaa                                                   >  1:3228944/1‑93 (MQ=255)

                                       ccGGCGC‑GCGCAGCGTGGATCCAGTTCCTGATCGTCATCCCGCTGATGATTATCCCGATGCTCGGTTCCAATACCGTGCAGGATCTGATGAAt                                                  >  2:3286265/1‑93 (MQ=255)

                                        cggcgc‑gcgcAGCGTGGATCCAGTTCCTGATCGTCATCCCGCTGATGATTATCCCGATGCTCGGTTCCAATACCGTGCAGGATCTGATGAATa                                                 <  2:4649862/93‑1 (MQ=255)

                                         ggcgc‑gcgcaGCGTGGATCCAGTTCCTGATCGTCATCCCGCTGATGATTATCCCGATGCTCGGTTCCAATATCGTGCAGGATCTGATGAATat                                                >  2:5812782/1‑92 (MQ=255)

                                           gcgcgcgcAGCGTGGATCCAGTTCCTGATCGTCATCCCGCTGATGATTATCCCGATGCTCGGTTCCAATACCGTGCAGGATCTGATGAATACt                                               <  2:6140359/89‑1 (MQ=255)

                                           gcgcgcgcAGCGTGGATCCAGTTCCTGATCGTCATCCCGCTGATGATTATCCCGATGCTCGGTTCCAATACCGTGCAGGATCTGATGAATACt                                               <  2:256745/89‑1 (MQ=255)

                                            cgcgcgcAGCGTGGATCCAGTTCCTGATCGTCATCCCGCTGATGATTATCCCGATGCTCGGTTCCAATACCGTGCAGGATCTGATGAATACta                                              <  1:1342418/90‑1 (MQ=255)

                                            cgcgcgcAGCGTGGATCCAGTTCCTGATCGTCATCCCGCTGATGATTATCCCGATGCTCGGTTCCAATACCGTGCAGGATCTGATGAATACta                                              <  2:5738208/90‑1 (MQ=255)

                                            cgcgcgcAGCGTGGATCCAGTTCCTGATCGTCATCCCGCTGATGATTATCCCGATGCTCGGTTCCAATACCGTGCAGGATCTGATGAATACta                                              <  1:4953137/90‑1 (MQ=255)

                                            cgcgcgcAGCGTGGATCCAGTTCCTGATCGTCATCCCGCTGATGATTATCCCGATGCTCGGTTCCAATACCGTGCAGGATCTGATGAATACta                                              <  2:5392446/90‑1 (MQ=255)

                                              cgcgcAGCGTGGATCCAGTGCCTGATCGTCATCCCGCTGATGATTATCCCGATGCTCGGTTCCAATACCGTGCAGGATCTGATGAATACtatt                                            <  1:1932467/92‑1 (MQ=255)

                                                 gcAGCGTGGATCCAGTTCCTGATCGTCATCCCGCTGATGATTATCCCGCTGCTCGGTTCCCATCCCGTGCAGGATCTGATGAATACTattatt                                         >  1:144080/1‑93 (MQ=255)

                                                 gcAGCGTGGATCCAGTTCCTGATCGTCATCCCGCTGATGATTATCCCGATGCTCGGTTCCAATACCGTGCAGGATCTGATGAATACTattatt                                         <  2:5886380/93‑1 (MQ=255)

                                                   aGCGTGGATCCAGTTCCTGATCGTCATCCCGCTGATGATTATCCCGATGCTCGGTTCCAATACCGTGCAGGATCTGATGAATACTATTATTaa                                       <  2:2040892/93‑1 (MQ=255)

                                                   aGCGTGGATCCAGTTCCTGATCGTCATCCCGCTGATGATTATCCCGATGCTCGGTTCCAATACCGTGCAGGATCTGATGAATACTATTATTaa                                       >  2:2381396/1‑93 (MQ=255)

                                                    gCGTGGATCCAGTTCCTGATCGTCATCCCGCTGATGATTATCCCGATGCTCGGTTCCAATACCGTGCAGGATCTGATGAATACTATTATTAat                                      <  1:4118571/93‑1 (MQ=255)

                                                    gCGTGGATCCAGTTCCTGATCGTCATCCCGCTGATGATTATCCCGATGCTCGGTTCCAATACCGTGCAGGATCTGATGAATACTATTATTAat                                      >  2:3523842/1‑93 (MQ=255)

                                                    gCGTGGATCCAGTTCCTGATCGTCATCCCGCTGATGATTATCCCGATGCTCGGTTCCAATACCGTGCAGGATCTGATGAATACTATTATTAat                                      <  1:6593267/93‑1 (MQ=255)

                                                    gCGTGGATCCAGTTCCTGATCGTCATCCCGCTGATGATTATCCCGATGCTCGGTTCCAATACCGTGCAGGATCTGATGAATACTATTATTAat                                      >  2:6468333/1‑93 (MQ=255)

                                                      gTGGATCCAGTTCCTGATCGTCATCCCGCTGATGATTATCCCGATGCTCGGTTCCAATACCGTGCAGGATCTGATGAATACTATTATTAatat                                    <  2:5604929/93‑1 (MQ=255)

                                                      gTGGATCCAGTTCCTGATCGTCATCCCGCTGATGATTATCCCGATGCTCGGTTCCAATACCGTGCAGGATCTGATGAATACTATTATTAatat                                    <  1:3972055/93‑1 (MQ=255)

                                                       tGGATCCAGTTCCTGATCGTCATCCCGCTGATGATTATCCCGATGCTCGGTTCCAATACCGTGCAGGATCTGATGAATACTATTATTAATATg                                   >  1:1904076/1‑93 (MQ=255)

                                                         gATCCAGTTCCTGATCGTCATCCCGCTGATGATTATCCCGATGCTCGGTTCCAATACCGTGCAGGATCTGATGAATACTATTATTAATATGAc                                 >  1:7436461/1‑93 (MQ=255)

                                                         gATCCAGTTCCTGATCGTCATCCCGCTGATGATTATCCCGATGCTCGGTTCCAATACCGTGCAGGATCTGATGAATACTATTATTAATATGAc                                 <  2:2611179/93‑1 (MQ=255)

                                                          aTCCAGTTCCTGATCGTCATCCCGCTGATGATTATCCCGATGCTCGGTTCCAATACCGTGCAGGATCTGATGAATACTATTATTAATATGAcc                                <  1:4265190/93‑1 (MQ=255)

                                                          aTCCAGTTCCTGATCGTCATCCCGCTGATGATTATCCCGATGCTCGGTTCCAATACCGTGCAGGATCTGATGAATACTATTATTAATATGAcc                                <  1:6287582/93‑1 (MQ=255)

                                                           tCCAGTTCCTGATCGTCATCCCGCTGATGATTATCCCGATGCTCGGTTCCAATACCGTGCAGGATCTGATGAATACTATTATTAATATGAccg                               >  2:7322572/1‑93 (MQ=255)

                                                            ccAGTTCCTGATCGTCATCCCGCTGATGATTATCCCGATGCTCGGTTCCAATACCGTGCAGGATCTGATGAATACTATTATTAATATGAccgc                              >  2:406770/1‑93 (MQ=255)

                                                             cAGTTCCTGATCGTCATCCCGCTGATGATTATCCCGATGCTCGGTTCCAATACCGTGCAGGATCTGATGAATACTATTATTAATATGAccgcc                             <  1:300304/93‑1 (MQ=255)

                                                              aGTTCCTGATCGTCATCCCGCTGATGATTATCCCGATGCTCGGTTCCAATACCGTGCAGGATCTGATGAATACTATTATTAATATGAccgccg                            >  2:6532272/1‑93 (MQ=255)

                                                               gTTCCTGATCGTCATCCCGCTGATGATTATCCCGATGCTCGGTTCCAATACCGTGCAGGATCTGATGAATACTATTATTAATATGACcgccgc                           >  1:904098/1‑93 (MQ=255)

                                                               gTTCCTGATCGTCATCCCGCTGATGATTATCCCGATGCTCGGTTCCAATACCGTGCAGGATCTGATGAATACTATTATTAATATGACcgccgc                           <  1:3778318/93‑1 (MQ=255)

                                                                  ccTGATCGTCATCCCGCTGATGATTATCCCGATGCTCGGTTCCAATACCGTGCAGGATCTGATGAATACTATTATTAATATGACCGCCGCAGc                        <  2:4967815/93‑1 (MQ=255)

                                                                  ccTGATCGTCATCCCGCTGATGATTATCCCGATGCTCGGTTCCAATACCGTGCAGGATCTGATGAATACTATTATTAATATGACCGCCGCAGc                        <  2:5561240/93‑1 (MQ=255)

                                                                    tGATCGTCATCCCGCTGATGATTATCCCGATGCTCGGTTCCAATACCGTGCAGGATCTGATGAATACTATTATTAATATGACCGCCGCAGCGt                      >  1:850100/1‑93 (MQ=255)

                                                                       tCGTCATCCCGCTGATGATTATCCCGATGCTCGGTTCCAATACCGTGCAGGATCTGATGAATACTATTATTAATATGACCGCCGCAGCGTCCa                   <  1:4550470/93‑1 (MQ=255)

                                                                       tCGTCATCCCGCTGATGATTATCCCGATGCTCGGTTCCAATACCGTGCAGGATCTGATGAATACTATTATTAATATGACCGCCGCAGCGTCCa                   <  1:501686/93‑1 (MQ=255)

                                                                         gTCATCCCGCTGATGATTATCCCGATGCTCGGTTCCAATACCGTGCAGGATCTGATGAATACTATTATTAATATGACCGCCGCAGCGTCCATg                 >  2:4199454/1‑93 (MQ=255)

                                                                          tCATCCCGCTGATGATTATCCCGATGCTCGGTTCCAATACCGTGCAGGATCTGATGAATACTATTATTAATATGACCGCCGCAGCGTCCATGc                >  2:1958889/1‑93 (MQ=255)

                                                                          tCATCCCGCTGATGATTATCCCGATGCTCGGTTCCAATACCGTGCAGGATCTGATGAATACTATTATTAATATGACCGCCGCAGCGTCCATGc                >  1:4316005/1‑93 (MQ=255)

                                                                            aTCCCGCTGATGATTATCCCGATGCTCGGTTCCAATACCGTGCAGGATCTGATGAATACTATTATTAATATGACCGCCGCAGCGTCCATGCtt              >  2:4102001/1‑93 (MQ=255)

                                                                             tCCCGCTGATGATTATCCCGATGCTCGGTTCCAATACCGTGCAGGATCTGATGAATACTATTATTAATATGACCGCCGCAGCGTCCATGCTTc             >  1:2102124/1‑93 (MQ=255)

                                                                             tCCCGCTGATGATTATCCCGATGCTCGGTTCCAATACCGTGCAGGATCTGATGAATACTATTATTAATATGACCGCCGCAGCGTCCATGCTTc             >  1:7283195/1‑93 (MQ=255)

                                                                             tCCCGCTGATGATTATCCCGATGCTCGGTTCCAATACCGTGCAGGATCTGATGAATACTATTATTAATATGACCGCCGCAGCGTCCATGCTTc             <  1:7868325/93‑1 (MQ=255)

                                                                             tCCCGCTGATGATTATCCCGATGCTCGGTTCCAATACCGTGCAGGATCTGATGAATACTATTATTAATATGACCGCCGCAGCGTCCATGCTTc             <  1:1663493/93‑1 (MQ=255)

                                                                              cccGCTGATGATTATCCCGATGCTCGGTTCCAATACCGTGCAGGATCTGATGAATACTATTATTAATATGGCCGCCGCAGCGTCCATGCTTcc            <  2:603886/93‑1 (MQ=255)

                                                                                 gCTGATGATTATCCCGATGCTCGGTTCCAATACCGTGCAGGATCTGATGAATACTATTATTAATATGACCGCCGCAGCGTCCATGCTTccgcc         >  2:4286855/1‑93 (MQ=255)

                                                                                  cTGATGATTATCCCGATGCTCGGTTCCAATACCGTGCAGGATCTGATGAATACTATTATTAATATGACCGCCGCAGCGTCCATGCTTccgccg        >  1:2761206/1‑93 (MQ=255)

                                                                                   tgatgaTTATCCCGATGCTCGGTTCCAATACCGTGCAGGATCTGATGAATACTATTATTAATATGACCGCCGCAGCGTCCATGCTTCCGCCGt       <  1:6751004/93‑1 (MQ=255)

                                                                                   tgatgaTTATCCCGATGCTCGGTTCCAATACCGTGCAGGATCTGATGAATACTATTATTAATATGACCGCCGCAGCGTCCATGCTTCCGCCGt       >  2:3737957/1‑93 (MQ=255)

                                                                                   tgatgaTTATCCCGATGCTCGGTTCCAATACCGTGCAGGATCTGATGAATACTATTATTAATATGACCGCCGCAGCGTCCATGCTTCCGCCGt       >  2:7370410/1‑93 (MQ=255)

                                                                                   tgatgaTTATCCCGATGCTCGGTTCCAATACCGTGCAGGATCTGATGAATACTATTATTAATATGACCGCCGCAGCGTCCATGCTTCCGCCGt       >  1:5222934/1‑93 (MQ=255)

                                                                                    gatgatTATCCCGATGCTCGGTTCCAATACCGTGCAGGATCTGATGAATACTATTATTAATATGACCGCCGCAGCGTCCATGCTTCCGCCGtt      <  1:6824241/93‑1 (MQ=255)

                                                                                      tgatTATCCCGATGCTCGGTTCCAATACCGTGCAGGATCTGATGAATACTATTATTAATATGACCGCCGCAGCGTCCATGCTTCCGCCGTTAt    >  1:5835132/1‑93 (MQ=255)

                                                                                      tgatTATCCCGATGCTCGGTTCCAATACCGTGCAGGATCTGATGAATACTATTATTAATATGACCGCCGCAGCGTCCATGCTTCCGCCGTTAt    <  2:2147348/93‑1 (MQ=255)

                                                                                        atTATCCCGATGCTCGGTTCCAATACCGTGCAGGATCTGATGAATACTATTATTAATATGACCGCCGCAGCGTCCATGCTTCCGCCGTTATtc  >  1:3318783/1‑93 (MQ=255)

TTTGGTAAGAAAACCGTCGAACTGAACGAAAACGGCGTTCCGGCGCGGCGCAGCGTGGATCCAGTTCCTGATCGTCATCCCGCTGATGATTAT‑CCGATGCTCGGTTCCAATACCGTGCAGGATCTGATGAATACTATTATTAATATGACCGCCGCAGCGTCCATGCTTCCGCCGTTATTC  >  NC_000913/3224832‑3225011

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 23 ≤` `ATCG/ATCG` `< 30 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`

GATK/CNVnator alignment

BRESEQ :: bam2aln output

TTTGGTAAGAAAACCGTCGAACTGAACGAAAACGGCGTTCCGGCGCGGCGCAGCGTGGATCCAGTTCCTGATCGTCATCCCGCTGATGATTAT‑C‑CGATGCTCGGTTCCAATACCGTGCAGGATCTGATGAATACTATTATTAATATGACCGCCGCAGCGTCCATGCTTCCGCCGTTATTCATCATGCT  >  NC_000913/3224832‑3225019

TTTGGTAAGAAAACCGTCGAACTGAACGAAAACGGCGTTCCGGCGC‑GCGCAGCGTGGATCCAGTTCCTGATCGTCATCCCGCTGATGATTAT‑C‑C                                                                                               <  SRR4302543.7966694/94‑1 (MQ=60)

TTTGGTAAGAAAACCGTCGAACTGAACGAAAACGGCGTTCCGGCGC‑GCGCAGCGTGGATCCAGTTCCTGATCGTCATCCCGCTGATGATTAT‑C‑C                                                                                               <  SRR4302543.7966693/94‑1 (MQ=60)

TTTGGTAAGAAAACCGTCGAACTGAACGAAAACGGCGTTCCGGCGC‑GCGCAGCGTGGATCCAGTTCCTGATCGTCATCCCGCTGATGATTAT‑C‑C                                                                                               >  SRR4302543.4813178/1‑94 (MQ=60)

  tggaaaggaaacccgtggactgaacgaaaaccggcttcccggcCGGCGCAGC‑TGGATCCAGTTCCTGATCGTCATCCCGCTGATGATTAT‑C‑Ccg                                                                                             <  SRR4302543.4936489/51‑3 (MQ=60)

  TGGTAAGAAAACCGTCGAACTGAACGAAAACGGCGTTCCGGCGC‑GCGCAGCGTGGATCCAGTTCCTGATCGTCATCCCGCTGATGATTAT‑C‑Ccg                                                                                             <  SRR4302543.4342025/94‑3 (MQ=60)

  TGGTAAGAAAACCGTCGAACTGAACGAAAACGGCGTTCCGGCGC‑GCGCAGCGTGGATCCAGTTCCTGATCGTCATCCCGCTGATGATTAT‑C‑Ccg                                                                                             <  SRR4302543.4936488/94‑3 (MQ=60)

  TGGTAAGAAAACCGTCGAACTGAACGAAAACGGCGTTCCGGCGC‑GCGCAGCGTGGATCCAGTTCCTGATCGTCATCCCGCTGATGATTAT‑C‑Ccg                                                                                             >  SRR4302543.4049450/1‑92 (MQ=60)

    GTAAGAAAACCGTCGAACTGAACGAAAACGGCGTTCCGGCGC‑GCGCAGCGTGGATCCAGTTCCTGATCGTCATCCCGCTGATGATTATCC‑CGAT                                                                                            <  SRR4302543.640753/94‑1 (MQ=60)

    GTAAGAAAACCGTCGAACTGAACGAAAACGGCGTTCCGGCGC‑GCGCAGCGTGGATCCAGTTCCTGATCGTCATCCCGCTGATGATTATCC‑CGAT                                                                                            <  SRR4302543.6248003/94‑1 (MQ=60)

    GTAAGAAAACCGTCGAACTGAACGAAAACGGCGTTCCGGCGC‑GCGCAGCGTGGATCCAGTTCCTGATCGTCATCCCGCTGATGATTATCC‑CGAT                                                                                            <  SRR4302543.2362617/94‑1 (MQ=60)

    GTAAGAAAACCGTCGAACTGAACGAAAACGGCGTTCCGGCGC‑GCGCAGCGTGGATCCAGTTCCTGATCGTCATCCCGCTGATGATTATCC‑CGAT                                                                                            >  SRR4302543.6051881/1‑94 (MQ=60)

     TAAGAAAACCGTCGAACTGAACGAAAACGGCGTTCCGGCGC‑GCGCAGCGTGGATCCAGTTCCTGATCGTCATCCCGCTGATGATTATCC‑CGATG                                                                                           >  SRR4302543.6311465/1‑94 (MQ=60)

     TAAGAAAACCGTCGAACTGAACGAAAACGGCGTTCCGGCGC‑GCGCAGCGTGGATCCAGTTCCTGATCGTCATCCCGCTGATGATTAT‑C‑Ccgatc                                                                                          >  SRR4302543.1488631/1‑89 (MQ=60)

     TAAGAAAACCGTCGAACTGAACGAAAACGGCGTGCCGGCGC‑GCGCAGCGTGGATCCAGTTCCTGATCGTCATCCCGCTGATGATTATCC‑CGATG                                                                                           <  SRR4302543.7679367/94‑1 (MQ=60)

     GAAGAAAACCGTCGAACTGAACGAAAACGGCGTTCCGGCGC‑GCGCAGCGTGGATCCAGTTCCTGATCGTCATCCCGCTGATGATTATCC‑CGATG                                                                                           <  SRR4302543.1256031/94‑1 (MQ=60)

      AAGAAAACCGTCGAACTGAACGAAAACGGCGTTCCGGCGC‑GCGCAGCGTGGATCCAGTTCCTGATCGTCATCCCGCTGATGATTATCC‑CGATGC                                                                                          >  SRR4302543.4024496/1‑94 (MQ=60)

      AAGAAAACCGTCGAACTGAACGAAAACGGCGTTCCGGCGC‑GCGCAGCGTGGATCCAGTTCCTGATCGTCATCCCGCTGATGATTATCC‑CGATGC                                                                                          >  SRR4302543.3285776/1‑94 (MQ=60)

       AGAAAACCGTCGAACTGAACGAAAACGGCGTTCCGGCGC‑GCGCAGCGTGGATCCAGTTCCTGATCGTCATCCCGCTGATGATTATCC‑CGATGCT                                                                                         >  SRR4302543.3553005/1‑94 (MQ=60)

       AGAAAACCGTCGAACTGAACGAAAACGGCGTTCCGGCGC‑GCGCAGCGTGGATCCAGTTCCTGATCGTCATCCCGCTGATGATTATCC‑CGATGCT                                                                                         <  SRR4302543.1443701/94‑1 (MQ=60)

         AAAACCGTCGAACTGAACGAAAACGGCGTTCCGGCGC‑GCGCAGCGTGGATCCAGTTCCTGATCGTCATCCCGCTGATGATTATCC‑CGATGCTCG                                                                                       >  SRR4302543.4382396/1‑94 (MQ=60)

         AAAACCGTCGAACTGAACGAAAACGGCGTTCCGGCGC‑GCGCAGCGTGGATCCAGTTCCTGATCGTCATCCCGCTGATGATTATCC‑CGATGCTCG                                                                                       >  SRR4302543.6880316/1‑94 (MQ=60)

          AAACCGTCGAACTGAACGAAAACGGCGTTCCGGCGC‑GCGCAGCGTGGATCCAGTTCCTGATCGTCATCCCGCTGATGATTATCC‑CGATGCTCGG                                                                                      >  SRR4302543.548430/1‑94 (MQ=60)

          AAACCGTCGAACTGAACGAAAACGGCGTTCCGGCGC‑GCGCAGCGTGGATCCAGTTCCTGATCGTCATCCCGCTGATGATTATCC‑CGATGCTCGG                                                                                      <  SRR4302543.6365795/94‑1 (MQ=60)

          AAACCGTCGAACTGAACGAAAACGGCGTTCCGGCGC‑GCGCAGCGTGGATCCAGTTCCTGATCGTCATCCCGCTGATGATTATCC‑CGATGCTCGG                                                                                      >  SRR4302543.548429/1‑94 (MQ=60)

          AAACCGTCGAACTGAACGAAAACGGCGTTCCGGCGC‑GCGCAGCGTGGATCCAGTTCCTGATCGTCATCCCGCTGATGATTATCC‑CGATGCTCGG                                                                                      >  SRR4302543.3549362/1‑94 (MQ=60)

            ACCGTCGAACTGAACGAAAACGGCGTTCCGGCGC‑GCGCAGCGTGGATCCAGTTCCTGATCGTCATCCCGCTGATGATTATCC‑CGATGCTCGGTT                                                                                    >  SRR4302543.6448943/1‑94 (MQ=60)

             CCGTCGAACTGAACGAAAACGGCGTTCCGGCGC‑GCGCAGCGTGGATCCAGTTCCTGATCGTCATCCCGCTGATGATTATCC‑CGATGCTCGGTTC                                                                                   >  SRR4302543.4642134/1‑94 (MQ=60)

             CCGTCGAACTGAACGAAAACGGCGTTCCGGCGC‑GCGCAGCGTGGATCCAGTTCCTGATCGTCATCCCGCTGATGATTATCC‑CGATGCTCGGTTC                                                                                   <  SRR4302543.3534880/94‑1 (MQ=60)

              CGTCGAACTGAACGAAAACGGCGTTCCGGCGC‑GCGCAGCGTGGATCCAGTTCCTGATCGTCATCCCGCTGATGATTATCC‑CGATGCTCGGTTCC                                                                                  >  SRR4302543.2911135/1‑94 (MQ=60)

              CGTCGAACTGAACGAAAACGGCGTTCCGGCGC‑GCGCAGCGTGGATCCAGTTCCTGATCGTCATCCCGCTGATGATTATCC‑CGATGCTCGGTTCC                                                                                  >  SRR4302543.685755/1‑94 (MQ=60)

              CGTCGAACTGAACGAAAACGGCGTTCCGGCGC‑GCGCAGCGTGGATCCAGTTCCTGATCGTCATCCCGCTGATGATTATCC‑CGATGCTCGGTTCC                                                                                  <  SRR4302543.6252176/94‑1 (MQ=60)

              CGTCGAACTGAACGAAAACGGCGTTCCGGCGC‑GCGCAGCGTGGATCCAGTTCCTGATCGTCATCCCGCTGATGATTATCC‑CGATGCTCGGTTCC                                                                                  >  SRR4302543.6371821/1‑94 (MQ=60)

               GTCGAACTGAACGAAAACGGCGTTCCGGCGC‑GCGCAGCGTGGATCCAGTTCCTGATCGTCATCCCGCTGATGATTATCC‑CGATGCTCGGTTCCA                                                                                 >  SRR4302543.1230633/1‑94 (MQ=60)

                 CGAACTGAACGAAAACGGCGTTCCGGCGC‑GCGCAGCGTGGATCCAGTTCCTGATCGTCATCCCGCTGATGATTATCC‑CGATGCTCGGTTCCAAT                                                                               <  SRR4302543.2868010/94‑1 (MQ=60)

                 CGAACTGAACGAAAACGGCGTTCCGGCGC‑GCGCAGCGTGGATCCAGTTCCTGATCGTCATCCCGCTGATGATTATCC‑CGATGCTCGGTTCCAAT                                                                               >  SRR4302543.6289301/1‑94 (MQ=60)

                 CGAACTGAACGAAAACGGCGTTCCGGCGC‑GCGCAGCGTGGATCCAGTTCCTGATCGTCATCCCGCTGATGATTATCC‑CGATGCTCGGTTCCAAT                                                                               <  SRR4302543.1567584/94‑1 (MQ=60)

                 CGAACTGAACGAAAACGGCGTTCCGGCGC‑GCGCAGCGTGGATCCAGTTCCTGATCGTCATCCCGCTGATGATTATCC‑CGATGCTAGGTTCCACT                                                                               >  SRR4302543.4483699/1‑94 (MQ=60)

                   AACTGAACGAAAACGGCGTTCCGGCGC‑GCGCAGCGTGGATCCAGTTCCTGATCGTCATCCCGCTGATGATTATCC‑CGATGCTCGGTTCCAATAC                                                                             >  SRR4302543.3974759/1‑94 (MQ=60)

                   AACTGAACGAAAACGGCGTTCCGGCGC‑GCGCAGCGTGGATCCAGTTCCTGATCGTCATCCCGCTGATGATTATCC‑CGATGCTCGGTTCCAATAC                                                                             <  SRR4302543.891439/94‑1 (MQ=60)

                   AACTGAACGAAAACGGCGTTCCGGCGC‑GCGCAGCGTGGATCCAGTTCCTGATCGTCATCCCGCTGATGATTATCC‑CGATGCTCGGTTCCAATAC                                                                             >  SRR4302543.1722246/1‑94 (MQ=60)

                    ACTGAACGAAAACGGCGTTCCGGCGC‑GCGCAGCGTGGATCCAGTTCCTGATCGTCATCCCGCTGATGATTATCC‑CGATGCTCGGTTCCAATACC                                                                            <  SRR4302543.6221406/94‑1 (MQ=60)

                    ACTGAACGAAAACGGCGTTCCGGCGC‑GCGCAGCGTGGATCCAGTTCCTGATCGTCATCCCGCTGATGATTATCC‑CGATGCTCGGTTCCAATACC                                                                            <  SRR4302543.5509214/94‑1 (MQ=60)

                    ACTGAACGAAAACGGCGTTCCGGCGC‑GCGCAGCGTGGATCCAGTTCCTGATCGTCATCCCGCTGATGATTATCC‑CGATGCTCGGTTCCAATACC                                                                            >  SRR4302543.1690335/1‑94 (MQ=60)

                     CTGAACGAAAACGGCGTTCCGGCGC‑GCGCAGCGTGGATCCAGTTCCTGATCGTCATCCCGCTGATGATTATCC‑CGATGCTCGGTTCCAATACCG                                                                           <  SRR4302543.6082209/94‑1 (MQ=60)

                      TGAACGAAAACGGCGTTCCGGCGC‑GCGCAGCGTGGATCCAGTTCCTGATCGTCATCCCGCTGATGATTATCC‑CGATGCTCGGTTCCAATACCGT                                                                          >  SRR4302543.4117327/1‑94 (MQ=60)

                      TGAACGAAAACGGCGTTCCGGCGC‑GCGCAGCGTGGATCCAGTTCCTGATCGTCATCCCGCTGATGATTATCC‑CGATGCTCGGTTCCAATACCGT                                                                          <  SRR4302543.4436717/94‑1 (MQ=60)

                       GAACGAAAACGGCGTTCCGGCGC‑GCGCAGCGTGGATCCAGTTCCTGATCGTCATCCCGCTGATGATTATCC‑CGATGCTCGGTTCCAATACCGTG                                                                         <  SRR4302543.1258500/94‑1 (MQ=60)

                        AACGAAAACGGCGTTCCGGCGC‑GCGCAGCGTGGATCCAGTTCCTGATCGTCATCCCGCTGATGATTATCC‑CGATGCTCGGTTCCAATACCGTGC                                                                        >  SRR4302543.3759046/1‑94 (MQ=60)

                        AACGAAAACGGCGTTCCGGCGC‑GCGCAGCGTGGATCCAGTTCCTGATCGTCATCCCGCTGATGATTATCC‑CGATGCTCGGTTCCAATACCGTGC                                                                        <  SRR4302543.3775183/94‑1 (MQ=60)

                         ACGAAAACGGCGTTCCGGCGC‑GCGCAGCGTGGATCCAGTTCCTGATCGTCATCCCGCTGATGATTATCC‑CGATGCTCGGTTCCAATACCGTGCA                                                                       <  SRR4302543.4550541/94‑1 (MQ=60)

                         ACGAAAACGGCGTTCCGGCGC‑GCGCAGCGTGGATCCAGTTCCTGATCGTCATCCCGCTGATGATTATCC‑CGATGCTCGGTTCCAATACCGTGCA                                                                       <  SRR4302543.3951801/94‑1 (MQ=60)

                          CGAAAACGGCGTTCCGGCGC‑GCGCAGCGTGGATCCAGTTCCTGATCGTCCTCCCGCTGATGCTTATCC‑CGATGCTCGCTTCCCATACCGTGCAG                                                                      >  SRR4302543.7037260/1‑94 (MQ=60)

                          CGAAAACGGCGTTCCGGCGC‑GCGCAGCGTGGATCCAGTTCCTGATCGTCATCCCGCTGATGATTATCC‑CGATGCTCGGTTCCAATACCGTGCAG                                                                      <  SRR4302543.6467994/94‑1 (MQ=60)

                           ggggcgggggggggcgccggggggggggtgctccttgtctttgacggtaacCCCGCTGATGATTATCC‑CGATGCTCGGTTCCAATACCGTGCAG                                                                      <  SRR4302543.7787023/43‑1 (MQ=60)

                           gagagCGGCGTTCCGGCGC‑GCGCAGCGTGAATCCAGTTCCTGATCGTCATCCCGCTGATGATTATCC‑CGATGCTCGGTTCCAATACCGTGCAGG                                                                     <  SRR4302543.7078333/89‑1 (MQ=60)

                           GAAAACGGCGTTCCGGCGC‑GCGCAGCGTGGATCCAGTTCCTGATCGTCATCCCGCTGATGATTATCC‑CGATGCTCGGTTCCAATACCGTGCAGG                                                                     <  SRR4302543.639415/94‑1 (MQ=60)

                           GAAAACGGCGTTCCGGCGC‑GCGCAGCGTGGATCCAGTTCCTGATCGTCATCCCGCTGATGATTATCC‑CGATGCTCGGTTCCAATACCGTGCAGG                                                                     >  SRR4302543.328369/1‑94 (MQ=60)

                           GAAAACGGCGTTCCGGCGC‑GCGCAGCGTGGATCCAGTTCCTGATCGTCATCCCGCTGATGATTATCC‑CGATGCTCGGTTCCAATACCGTGCAGG                                                                     >  SRR4302543.2550954/1‑94 (MQ=60)

                           GAAAACGGCGTTCCGGCGC‑GCGCAGCGTGGATCCAGTTCCTGATCGTCATCCCGCTGATGATTATCC‑CGATGCTCGGTTCCAATACCGTGCAGG                                                                     >  SRR4302543.7335291/1‑94 (MQ=60)

                           GAAAACGGCGTTCCGGCGC‑GCGCAGCGTGGATCCAGTTCCTGATCGTCATCCCGCTGATGATTATCC‑CGATGCTCGGTTCCAATACCGTGCAGG                                                                     <  SRR4302543.6122175/94‑1 (MQ=60)

                           GAAAACGGCGTTCCGGCGC‑GCGCAGCGTGGATCCAGTTCCTGATCGTCATCCCGCTGATGATTATCC‑CGATGCTCGGTTCCAATACCGTGCAGG                                                                     >  SRR4302543.1117797/1‑94 (MQ=60)

                             AAACGGCGTTCCGGCGC‑GCGGAGCGTGGATCCAGTTCCTGATCGTCATCCCGCTGATGATTATCC‑CGATGCTCGGTTCCAATACCGTGCAGGAT                                                                   >  SRR4302543.7737146/1‑94 (MQ=60)

                             AAACGGCGTTCCGGCGC‑GCGCAGCGTGGATCCAGTTCCTGATCGTCATCCCGCTGATGATTATCC‑CGATGCTCGGTTCCAATACCGTGCAGGAT                                                                   >  SRR4302543.2937651/1‑94 (MQ=60)

                             AAACGGCGTTCCGGCGC‑GCGCAGCGTGGATCCAGTTCCTGATCGTCATCCCGCTGATGATTATCC‑CGATGCTCGGTTCCAATACCGTGCAGGAT                                                                   <  SRR4302543.6683922/94‑1 (MQ=60)

                             AAACGGCGTTCCGGCGC‑GCGCAGCGTGGATCCAGTTCCTGATCGTCATCCCGCTGATGATTATCC‑CGATGCTCGGTTCCAATACCGTGCAGGAT                                                                   <  SRR4302543.2383822/94‑1 (MQ=60)

                             AAACGGCGTTCCGGCGC‑GCGCAGCGTGGATCCAGTTCCTGATCGTCATCCCGCTGATGATTATCC‑CGATGCTCGGTTCCAATACCGTGCAGGAT                                                                   <  SRR4302543.872466/94‑1 (MQ=60)

                              AACGGCGTTCCGGCGC‑GCGCAGCGTGGATCCAGTTCCTGATCGTCATCCCGCTGATGATTATCC‑CGATGCTCGGTTCCAATACCGTGCAGGATC                                                                  <  SRR4302543.2012036/94‑1 (MQ=60)

                              AACGGCGTTCCGGCGC‑GCGCAGCGTGGATCCAGTTCCTGATCGTCATCCCGCTGATGATTATCC‑CGATGCTCGGTTCCAATACCGTGCAGGATC                                                                  <  SRR4302543.5010433/94‑1 (MQ=60)

                              AACGGCGTGCCGGCGC‑GCGCAGCGTGGATCCAGTTCCTGATCGTCATCCCGCTGATGATTATCC‑CGATGCTCGGTTCCAATACCGTGCAGGATC                                                                  <  SRR4302543.1887392/94‑1 (MQ=60)

                              AACGGCGCTCCGGCTC‑GCGCAGCGTGGAACCAGTTCCTGATCGTCATCCCGCTGATGATTATCC‑CGATGCTCGGTTCCAATACCGTGCAGGATC                                                                  <  SRR4302543.2745690/94‑1 (MQ=60)

                               ACGGCGGTCCGGCGC‑GCGCAGCGTGGATCCAGTTCCTGATCGTCATCCCGCTGATGATTATCC‑CGATGCTCGGTTCCAATACCGTGCAGGATCT                                                                 <  SRR4302543.4468726/94‑1 (MQ=60)

                                CGGCGTTCCGGCGC‑GCGCAGCGTGGATCCAGTTCCTGATCGTCATCCCGCTGATGATTATCC‑CGATGCTCGGTTCCAATACCGTGCAGGATCTG                                                                <  SRR4302543.3787707/94‑1 (MQ=60)

                                CGGCGTTCCGGCGC‑GCGCAGCGTGGATCCAGTTCCTGATCGTCATCCCGCTGATGATTATCC‑CGATGCTCGGTTCCAATACCGTGCAGGATCTG                                                                <  SRR4302543.3787706/94‑1 (MQ=60)

                                CGGCGTTCCGGCGC‑GCGCAGCGTGGATCCAGTTCCTGATCGTCATCCCGCTGATGATTATCC‑CGATGCTCGGTTCCAATACCGTGCAGGATCTG                                                                >  SRR4302543.2858886/1‑94 (MQ=60)

                                CGGCGTTCCGGCGC‑GCGCAGCGTGGATCCAGTTCCTGATCGTCATCCCGCTGATGATTATCC‑CGATGCTCGGTTCCAATACCGTGCAGGATCTG                                                                <  SRR4302543.2118377/94‑1 (MQ=60)

                                CGGCGTTCCGGCGC‑GCGCAGCGTGGATCCAGTTCCTGATCGTCATCCCGCTGATGATTATCC‑CGATGCTCGGTTCCAATACCGTGCAGGATCTG                                                                >  SRR4302543.101853/1‑94 (MQ=60)

                                 GGCGTTCCGGCGC‑GCGCAGCGTGGATCCAGTTCCTGATCGTCATCCCGCTGATGATTATCC‑CGATGCTCGGTTCCAATACCGTGCAGGATCTGA                                                               >  SRR4302543.1941514/1‑94 (MQ=60)

                                  GCGTTCCGGCGC‑GCGCAGCGTGGATCCAGTTCCTGATCGTCATCCCGCTGATGATTATCC‑CGATGCTCGGTTCCAATACCGTGCAGGATCTGAT                                                              <  SRR4302543.6926531/94‑1 (MQ=60)

                                  GCGTTCCGGCGC‑GCGCAGCGTGGATCCAGTTCCTGATCGTCATCCCGCTGATGATTATCC‑CGATGCTCGGTTCCAATACCGTGCAGGATCTGAT                                                              <  SRR4302543.2529313/94‑1 (MQ=60)

                                   CGTTCCGGCGC‑GCGCAGCGTGGATCCAGTTCCTGATCGTCATCCCGCTGATGATTATCC‑CGATGCGCGGTTGCAATACCGTGGAGGATGTGATG                                                             >  SRR4302543.1744687/1‑94 (MQ=60)

                                    GTTCCGGCGC‑GCGCAGCGTTGATCCAGTTCCTGATCGTCATCCCGCTGATGATTATCC‑CGATGCTCGGTTCCAATACCGTGCAGGATCTGATGA                                                            <  SRR4302543.5699423/94‑1 (MQ=60)

                                    GTTCCGGCGC‑GCGCAGCGTGGATCCAGTTCCTGATCGTCATCCCGCTGATGATTATCC‑CGATGCTCGGTTCCAATACCGTGCAGGATCTGATGA                                                            <  SRR4302543.5699424/94‑1 (MQ=60)

                                    GTTCCGGCGC‑GCGCAGCGTGGATCCAGTTCCTGATCGTCATCCCGCTGATGATTATCC‑CGATGCTCGGTTCCAATACCGTGCAGGATCTGATGA                                                            <  SRR4302543.3292880/94‑1 (MQ=60)

                                     TTCCGGCGC‑GCGCAGCGTGGATCCAGTTCCTGATCGTCATCCCGCTGATGATTATCC‑CGATGCTCGGTTCCAATACCGTGCAGGATCTGATGAA                                                           <  SRR4302543.5591954/94‑1 (MQ=60)

                                     TTCCGGCGC‑GCGCAGCGTGGATCCAGTTCCTGATCGTCATCCCGCTGATGATTATCC‑CGATGCTCGGTTCCAATACCGTGCAGGATCTGATGAA                                                           <  SRR4302543.6389921/94‑1 (MQ=60)

                                     TTCCGGCGC‑GCGCAGCGTGGATCCAGTTCCTGATCGTCATCCCGCTGATGATTATCC‑CGATGCTCGGTTCCAATACCGTGCAGGATCTGATGAA                                                           <  SRR4302543.4018939/94‑1 (MQ=60)

                                     TTCCGGCGC‑GCGCAGCGTGGATCCAGTTCCTGATCGTCATCCCGCTGATGATTATCC‑CGATGCTCGGTTCCAATACCGTGCAGGATCTGATGAA                                                           >  SRR4302543.3258139/1‑94 (MQ=60)

                                     TTCCGGCGC‑GCGCAGCGTGGATCCAGTTCCTGATCGTCATCCCGCTGATGATTATCC‑CGATGCTCGGTTCCAATACCGTGCAGGATCTGATGAA                                                           <  SRR4302543.3127902/94‑1 (MQ=60)

                                      TCCGGCGC‑GCGCAGCGTGGATCCAGTTCCTGATCGTCATCCCGCTGATGATTATCC‑CGATGCTCGGTTCCAATACCGTGCAGGATCTGATGAAT                                                          <  SRR4302543.1114411/94‑1 (MQ=60)

                                       CCGGCGC‑GCGCAGCGTGGATCCAGTTCCTGATCGTCATCCCGCTGATGATTATCC‑CGATGCTCGGTTCCAATACCGTGCAGGATCTGATGAATA                                                         >  SRR4302543.6603326/1‑94 (MQ=60)

                                       CCGGCGC‑GCGCAGCGTGGATCCAGTTCCTGAGCGGCATCCCGCTGATGAGGATCC‑CGATGCGCGGTGCCAATACCGGGCAGGATCcgaggaaga                                                         >  SRR4302543.7072271/1‑85 (MQ=27)

                                        CGGCGC‑GCGCAGCGTGGATCCAGTTCCTGATCGTCATCCCGCTGATGATTATCC‑CGATGCTCGGTTCCAATACCGTGCAGGATCTGATGAATAC                                                        <  SRR4302543.4068024/94‑1 (MQ=60)

                                        CGGCGC‑GCGCAGCGTGGATCCAGTTCCTGATCGTCATCCCGCTGATGATTATCC‑CGATGCTCGGTTCCAATACCGTGCAGGATCTGATGAATAC                                                        >  SRR4302543.3043732/1‑94 (MQ=60)

                                         GGCGC‑GCGCAGCGTGGATCCAGTTCCTGATCGTCATCCCGCTGATGATTATCC‑CGATGCTCGGTTCCAATACCGTGCAGGATCTGATGAATACT                                                       >  SRR4302543.6756116/1‑94 (MQ=60)

                                           CGC‑GCGCAGCGTGGATCCAGTTCCTGATCGTCATCCCGCTGATGATTATCC‑CGATGCTCGGTTCCAATACCGTGCAGGATCTGATGAATACTAT                                                     <  SRR4302543.5997161/94‑1 (MQ=60)

                                           CGC‑GCGCAGCGTGGATCCAGTTCCTGATCGTCATCCCGCTGATGATTATCC‑CGATGCTCGGTTCCAATACCGTGCAGGATCTGATGAATACTAT                                                     <  SRR4302543.4998244/94‑1 (MQ=60)

                                           CGC‑GCGCAGCGTGGATCCAGTTCCTGATCGTCATCCCGCTGATGATTATCC‑CGATGCTCGGTTCCAATACCGTGCAGGATCTGATGAATACTAT                                                     <  SRR4302543.1354403/94‑1 (MQ=60)

                                           CGC‑GCGCAGCGTGGATCCAGTTCCTGATCGTCATCCCGCTGATGATTATCC‑CGATGCTCGGTTCCAATACCGTGCAGGATCTGATGAATACTAT                                                     <  SRR4302543.4570352/94‑1 (MQ=60)

                                           CGC‑GCGCAGCGTGGATCCAGTTCCTGATCGTCATCCCGCTGATGATTAT‑CACGATGTTCGGATCCAATACCGAGCAGGATATGATGAATACTGT                                                     >  SRR4302543.1737305/1‑94 (MQ=60)

                                            ggcGCGCAGCGTGGATCCAGTTCCTGATCGTCATCCCGCTGATGATTATCC‑CGATGCTCGGTTCCAATACCGTGCAGGATCTGATGAATACTAT                                                     <  SRR4302543.4570353/91‑1 (MQ=60)

                                             gcGCGCAGCGTGGATCCAGTTCCTGATCGTCATCCCGCTGATGATTATCC‑CGATGCTCGGTTCCAATACCGTGCAGGATCTGATGAATACTATT                                                    <  SRR4302543.6405873/92‑1 (MQ=60)

                                             gcGCGCAGCGTGGATCCAGTTCCTGATCGTCATCCCGCTGATGATTATCC‑CGATGCTCGGTTCCAATACCGTGCAGGATCTGATGAATACTATT                                                    <  SRR4302543.5904996/92‑1 (MQ=60)

                                              CGCGCAGCGTGGATCCAGTTCCTGATCGTCATCCCGCTGATGATTATCC‑CGATGCTCGGTTCCAATACCGTGagagtggagatcggaagagcgg                                                   >  SRR4302543.2087159/1‑72 (MQ=60)

                                              CGCGCAGCGTGGATCCAGTGCCTGATCGTCATCCCGCTGATGATTATCC‑CGATGCTCGGTTCCAATACCGTGCAGGATCTGATGAATACTATTA                                                   <  SRR4302543.1949849/94‑1 (MQ=60)

                                               GCGCAGCGTGGATCCAGTTCCTGATCGTCATCCCGCTGATGATTATCC‑CGATGCTCGGTTCCAATACCGTGCAGGATCTGATGAATACTATTAT                                                  <  SRR4302543.1043717/94‑1 (MQ=60)

                                               GCGCAGCGTGGATCCAGTTCCTGATCGTCATCCCGCTGATGATTATCC‑CGATGCTCGGTTCCAATACCGTGCAGGATCTGATGAATACTATTAT                                                  <  SRR4302543.5755272/94‑1 (MQ=60)

                                               GCGCAGCGTGGATCCAGTTCCTGATCGTCATCCCGCTGATGATTATCC‑CGATGCTCGGTTCCAATACCGTGCAGGATCTGATGAATACTATTAT                                                  >  SRR4302543.4122658/1‑94 (MQ=60)

                                                CGCAGCGTGGATCCAGTTCCTGATCGTCATCCCGCTGATGATTATCC‑CGCTGCTCGGTTCCCATCCCGTGCAGGATCTGATGAATACTATTATT                                                 >  SRR4302543.145332/1‑94 (MQ=60)

                                                 GCAGCGTGGATCCAGTTCCTGATCGTCATCCCGCTGATGATTATCC‑CGATGCTCGGTTCCAATACCGTGCAGGATCTGATGAATACTATTATTA                                                <  SRR4302543.7864547/94‑1 (MQ=60)

                                                  CAGCGTGGATCCAGTTCCTGATCGTCATCCCGCTGATGATTATCC‑CGATGCTCGGTTCCAATACCGTGCAGGATCTGATGAATACTATTATTAA                                               >  SRR4302543.1515461/1‑94 (MQ=60)

                                                  CAGCGTGGATCCAGTTCCTGATCGTCATCCCGCTGATGATTATCC‑CGATGCTCGGTTCCAATACCGTGCAGGATCTGATGAATACTATTATTAA                                               >  SRR4302543.6156206/1‑94 (MQ=60)

                                                    GCGTGGATCCAGTTCCTGATCGTCATCCCGCTGATGATTATCC‑CGATGCTCGGTTCCAATACCGTGCAGGATCTGATGAATACTATTATTAATA                                             <  SRR4302543.898978/94‑1 (MQ=60)

                                                    GCGTGGATCCAGTTCCTGATCGTCATCCCGCTGATGATTATCC‑CGATGCTCGGTTCCAATACCGTGCAGGATCTGATGAATACTATTATTAATA                                             <  SRR4302543.7105631/94‑1 (MQ=60)

                                                    GCGTGGATCCAGTTCCTGATCGTCATCCCGCTGATGATTATCC‑CGATGCTCGGTTCCAATACCGTGCAGGATCTGATGAATACTATTATTAATA                                             <  SRR4302543.6655388/94‑1 (MQ=60)

                                                    GCGTGGATCCAGTTCCTGATCGTCATCCCGCTGATGATTATCC‑CGATGCTCGGTTCCAATACCGTGCAGGATCTGATGAATACTATTATTAATA                                             <  SRR4302543.4155679/94‑1 (MQ=60)

                                                     CGTGGATCCAGTTCCTGATCGTCATCCCGCTGATGATTATCC‑CGATGCTCGGTTCCAATACCGTGCAGGATCTGATGAATACTATTATTAATAT                                            <  SRR4302543.5806630/94‑1 (MQ=60)

                                                     CGTGGATCCAGTTCCTGATCGTCATCCCGCTGATGATTATCC‑CGATGCTCGGTTCCAATACCGTGCAGGATCTGATGAATACTATTATTAATAT                                            <  SRR4302543.7159033/94‑1 (MQ=60)

                                                     CGTGGATCCAGTTCCTGATCGTCATCCCGCTGATGATTATCC‑CGATGCTCGGTTCCAATACCGTGCAGGATCTGATGAATACTATTATTAATAT                                            <  SRR4302543.6900332/94‑1 (MQ=60)

                                                      GTGGATCCAGTTCCTGATCGTCATCCCGCTGATGATTATCC‑CGATGCTCGGTTCCAATACCGTGCAGGATCTGATGAATACTATTATTAATATG                                           <  SRR4302543.6164929/94‑1 (MQ=60)

                                                      GTGGATCCAGTTCCTGATCGTCATCCCGCTGATGATTATCC‑CGATGCTCGGTTCCAATACCGTGCAGGATCTGATGAATACTATTATTAATATG                                           <  SRR4302543.1025130/94‑1 (MQ=60)

                                                      GTGGATCCAGTTCCTGATCGTCATCCCGCTGATGATTATCC‑CGATGCTCGGTTCCAATACCGTGCAGGATCTGATGAATACTATTATTAATATG                                           <  SRR4302543.2451686/94‑1 (MQ=60)

                                                      GTGGATCCAGTTCCTGATCGTCATCCCGCTGATGATTATCC‑CGATGCTCGGTTCCAATACCGTGCAGGATCTGATGAATACTATTATTAATATG                                           <  SRR4302543.4007265/94‑1 (MQ=60)

                                                      GTGGATCCAGTTCCTGATCGTCATCCCGCTGATGATTATCC‑CGATGCTCGGTTCCAATACCGTGCAGGATCTGATGAATACTATTATTAATATG                                           >  SRR4302543.2804024/1‑94 (MQ=60)

                                                      GTGGATCCAGTTCCTGATCGTCATCCCGCTGATGATTATCC‑CGATGCTCGGTTCCAATACCGTGCAGGATCTGATGAATACTATTATTAATATG                                           >  SRR4302543.1921211/1‑94 (MQ=60)

                                                      GTGGATCCAGTTCCTGATCGTCATCCCGCTGATGATTATCC‑CGATGCTCGGTTCCAATACCGTGCAGGATCTGATGAATACTATTATTAATATG                                           <  SRR4302543.5009514/94‑1 (MQ=60)

                                                      GTGGATCCAGTTCCTGATCGTCATCCCGCTGATGATTATCC‑CGATGCTCGGTTCCAATACCGTGCAGGATCTGATGAATACTATTATTAATATG                                           <  SRR4302543.5021364/94‑1 (MQ=60)

                                                        GGATCCAGTTCCTGATCGTCATCCCGCTGATGATTATCC‑CGATGCTCGGTTCCAATACCGTGCAGGATCTGATGAATACTATTATTAATATGAC                                         >  SRR4302543.7507748/1‑94 (MQ=60)

                                                        GGATCCAGTTCCTGATCGTCATCCCGCTGATGATTATCC‑CGATGCTCGGTTCCAATACCGTGCAGGATCTGATGAATACTATTATTAATATGAC                                         <  SRR4302543.6622174/94‑1 (MQ=60)

                                                         GATCCAGTTCCTGATCGTCATCCCGCTGATGATTATCC‑CGATGCTCGGTTCCAATACCGTGCAGGATCTGATGAATACTATTATTAATATGACC                                        <  SRR4302543.6233334/94‑1 (MQ=60)

                                                         GATCCAGTTCCTGATCGTCATCCCGCTGATGATTATCC‑CGATGCTCGGTTCCAATACCGTGCAGGATCTGATGAATACTATTATTAATATGACC                                        <  SRR4302543.6233333/94‑1 (MQ=60)

                                                         GATCCAGTTCCTGATCGTCATCCCGCTGATGATTATCC‑CGATGCTCGGTTCCAATACCGTGCAGGATCTGATGAATACTATTATTAATATGACC                                        >  SRR4302543.5192838/1‑94 (MQ=60)

                                                          ATCCAGTTCCTGATCGTCATCCCGCTGATGATTATCC‑CGATGCTCGGTTCCAATACCGTGCAGGATCTGATGAATACTATTATTAATATGACCG                                       <  SRR4302543.4303933/94‑1 (MQ=60)

                                                          ATCCAGTTCCTGATCGTCATCCCGCTGATGATTATCC‑CGATGCTCGGTTCCAATACCGTGCAGGATCTGATGAATACTATTATTAATATGACCG                                       <  SRR4302543.6346803/94‑1 (MQ=60)

                                                          ATCCAGTTCCTGATCGTCATCCCGCTGATGATTATCC‑CGATGCTCGGTTCCAATACCGTGCAGGATCTGATGAATACTATTATTAATATGACCG                                       <  SRR4302543.4303932/94‑1 (MQ=60)

                                                          ATCCAGTTCCTGATCGTCATCCCGCTGATGATTATCC‑CGATGCTCGGTTCCAATACCGTGCAGGATCTGATGAATACTATTATTAATATGACCG                                       >  SRR4302543.1931749/1‑94 (MQ=60)

                                                          ATCCAGTTCCTGATCGTCATCCCGCTGATGATTATCC‑CGATGCTCGGTTCCAATACCGTGCAGGATCTGATGAATACTATTATTAATATGACCG                                       <  SRR4302543.5328067/94‑1 (MQ=60)

                                                            CCAGTTCCTGATCGTCATCCCGCTGATGATTATCC‑CGATGCTCGGTTCCAATACCGTGCAGGATCTGATGAATACTATTATTAATATGACCGCC                                     >  SRR4302543.966719/1‑94 (MQ=60)

                                                             CAGTTCCTGATCGTCATCCCGCTGATGATTATCC‑CGATGCTCGGTTCCAATACCGTGCAGGATCTGATGAATACTATTATTAATATGACCGCCG                                    <  SRR4302543.303003/94‑1 (MQ=60)

                                                              AGTTCCTGATCGTCATCCCGCTGATGATTATCC‑CGATGCTCGGTTCCAATACCGTGCAGGATCTGATGAATACTATTATTAATATGACCGCCGC                                   >  SRR4302543.912059/1‑94 (MQ=60)

                                                              AGTTCCTGATCGTCATCCCGCTGATGATTATCC‑CGATGCTCGGTTCCAATACCGTGCAGGATCTGATGAATACTATTATTAATATGACCGCCGC                                   >  SRR4302543.7354315/1‑94 (MQ=60)

                                                               GTTCCTGATCGTCATCCCGCTGATGATTATCC‑CGATGCTCGGTTCCAATACCGTGCAGGATCTGATGAATACTATTATTAATATGACCGCCGCA                                  <  SRR4302543.3811582/94‑1 (MQ=60)

                                                               GTTCCTGATCGTCATCCCGCTGATGATTATCC‑CGACGCTCGGTTCCAATACCGTGCAGGATCTGATGAATACTATTATTAATATGACCGCCGCA                                  <  SRR4302543.6161734/94‑1 (MQ=60)

                                                                 TCCTGATCGTCATCCCGCTGATGATTATCC‑CGATGCTCGGTTCCAATACCGTGCAGGATCTGATGAATACTATTATTAATATGACCGCCGCAGC                                >  SRR4302543.1566432/1‑94 (MQ=60)

                                                                  CCTGATCGTCATCCCGCTGATGATTATCC‑CGATGCTCGGTTCCAATACCGTGCAGGATCTGATGAATACTATTATTAATATGACCGCCGCAGCG                               >  SRR4302543.914261/1‑94 (MQ=60)

                                                                  CCTGATCGTCATCCCGCTGATGATTATCC‑CGATGCTCGGTTCCAATACCGTGCAGGATCTGATGAATACTATTATTAATATGACCGCCGCAGCG                               >  SRR4302543.2273680/1‑94 (MQ=60)

                                                                   CTGATCGTCATCCCGCTGATGATTATCC‑CGATGCTCGGTTCCAATACCGTGCAGGATCTGATGAATACTATTATTAATATGACCGCCGCAGCGT                              >  SRR4302543.1919581/1‑94 (MQ=60)

                                                                   CTGATCGTCATCCCGCTGATGATTATCC‑CGATGCTCGGTTCCAATACCGTGCAGGATCTGATGAATACTATTATTAATATGACCGCCGCAGCGT                              >  SRR4302543.857642/1‑94 (MQ=60)

                                                                    TGATCGTCATCCCGCTGATGATTATCC‑CGATGCTCGGTTCCAATACCGTGCAGGATCTGATGAATACTATTATTAATATGACCGCCGCAGCGTC                             <  SRR4302543.3349239/94‑1 (MQ=60)

                                                                     GATCGTCATCCCGCTGATGATTATCC‑CGATGCTCGGTTCCAATACCGTGCAGGATCTGATGAATACTATTATTAATATGACCGCCGCAGCGTCC                            >  SRR4302543.7469901/1‑94 (MQ=60)

                                                                     GATCGTCATCCCGCTGATGATTATCC‑CGATGCTCGGTTCCAATACCGTGCAGGATCTGATGAATACTATTATTAATATGACCGCCGCAGCGTCC                            <  SRR4302543.3014041/94‑1 (MQ=60)

                                                                     GATCGTCATCCCGCTGATGATTATCC‑CGATGCTCGGTTCCAATACCGTGCAGGATCTGATGAATACTATTATTAATATGACCGCCGCAGCGTCC                            <  SRR4302543.5250934/94‑1 (MQ=60)

                                                                     GATCGTCATCCCGCTGATGATTATCC‑CGATGCTCGGTTCCAATACCGTGCAGGATCTGATGAATACTATTATTAATATGACCGCCGCAGCGTCC                            >  SRR4302543.3474791/1‑94 (MQ=60)

                                                                       TCGTCATCCCGCTGATGATTATCC‑CGATGCTCGGTTCCAATACCGTGCAGGATCTGATGAATACTATTATTAATATGACCGCCGCAGCGTCCAT                          <  SRR4302543.4043287/94‑1 (MQ=60)

                                                                       TCGTCATCCCGCTGATGATTATCC‑CGATGCTCGGTTCCAATACCGTGCAGGATCTGATGAATACTATTATTAATATGACCGCCGCAGCGTCCAT                          <  SRR4302543.4591913/94‑1 (MQ=60)

                                                                       TCGTCATCCCGCTGATGATTATCC‑CGATGCTCGGTTCCAATACCGTGCAGGATCTGATGAATACTATTATTAATATGACCGCCGCAGCGTCCAT                          <  SRR4302543.506342/94‑1 (MQ=60)

                                                                       TCGTCATCCCGCTGATGATTATCC‑CGATGCTCGGTTCCAATACCGTGCAGGATCTGATGAATACTATTATTAATATGACCGCCGCAGCGTCCAT                          <  SRR4302543.609520/94‑1 (MQ=60)

                                                                       TCGTCATCCCGCTGATGATTATCC‑CGATGCTCGGTGCCAATACCGTGCAGGATCTGATGAATACTATTATTAATATGACCGCCGCAGCGTCCAT                          <  SRR4302543.4194579/94‑1 (MQ=60)

                                                                        CGTCATCCCGCTGATGATTATCC‑CGATGCTCGGTTCCAATACCGTGCAGGATCTGATGAATACTATTATTAATATGACCGCCGCAGCGTCCATG                         <  SRR4302543.6304299/94‑1 (MQ=60)

                                                                        CGTCATCCCGCTGATGATTATCC‑CGATGCGCGGTTCCAATACCGTGCAGGATCTGATGAATACTATTATTAATATGACCGCCGCAGCGTCCATG                         <  SRR4302543.7767283/94‑1 (MQ=60)

                                                                         GTCATCCCGCTGATGATTATCC‑CGATGCTCGGTTCCAATACCGTGCAGGATCTGATGAATACTATTATTAATATGACCGCCGCAGCGTCCATGC                        <  SRR4302543.6706261/94‑1 (MQ=60)

                                                                         GTCATCCCGCTGATGATTATCC‑CGATGCTCGGTTCCAATACCGTGCAGGATCTGATGAATACTATTATTAATATGACCGCCGCAGCGTCCATGC                        >  SRR4302543.4355208/1‑94 (MQ=60)

                                                                          TCATCCCGCTGATGATTATCC‑CGATGCTCGGTTCCAATACCGTGCAGGATCTGATGAATACTATTATTAATATGACCGCCGCAGCGTCCATGCT                       >  SRR4302543.7985093/1‑94 (MQ=60)

                                                                          TCATCCCGCTGATGATTATCC‑CGATGCTCGGTTCCAATACCGTGCAGGATCTGATGAATACTATTATTAATATGACCGCCGCAGCGTCCATGCT                       <  SRR4302543.3677651/94‑1 (MQ=60)

                                                                           CATCCCGCTGATGATTATCC‑CGATGCTCGGTTCCAATACCGTGCAGGATCTGATGAATACTATTATTAATATGACCGCCGCAGCGTCCATGCTT                      >  SRR4302543.7634304/1‑94 (MQ=60)

                                                                            ATCCCGCTGATGATTATCC‑CTATGCTCGGTTCCAATACCGTGCAGGATCTGATGAATACTATTATTAATATGACCGCCGCAGCGTCCATGCTTC                     >  SRR4302543.2863564/1‑94 (MQ=60)

                                                                            ATCCCGCTGATGATTATCC‑CGATGCTCGGTTCCAATACCGTGCAGGATCTGATGAATACTATTATTAATATGACCGCCGCAGCGTCCATGCTTC                     >  SRR4302543.7353522/1‑94 (MQ=60)

                                                                            ATCCCGCTGATGATTATCC‑CGATGCTCGGTTCCAATACCGTGCAGGATCTGATGAATACTATTATTAATATGACCGCCGCAGCGTCCATGCTTC                     >  SRR4302543.2120940/1‑94 (MQ=60)

                                                                            ATCCCGCTGATGATTATCC‑CGATGCTCGGTTCCAATACCGTGCAGGATCTGATGAATACTATTATTAATATGACCGCCGCAGCGTCCATGCTTC                     >  SRR4302543.608398/1‑94 (MQ=60)

                                                                             TCCCGCTGATGATTATCC‑CGATGCTCGGTTCCAATACCGTGCAGGATCTGATGAATACTATTATTAATATGACCGCCGCAGCGTCCATGCTTCC                    <  SRR4302543.6950273/94‑1 (MQ=60)

                                                                             TCCCGCTGATGATTATCC‑CGATGCTCGGTTCCAATACCGTGCAGGATCTGATGAATACTATTATTAATATGACCGCCGCAGCGTCCATGCTTCC                    <  SRR4302543.7942415/94‑1 (MQ=60)

                                                                             TCCCGCTGATGATTATCC‑CGATGCTCGGTTCCAATACCGTGCAGGATCTGATGAATACTATTATTAATATGACCGCCGCAGCGTCCATGCTTCC                    <  SRR4302543.1678397/94‑1 (MQ=60)

                                                                             TCCCGCTGATGATTATCC‑CGATGCTCGGTTCCAATACCGTGCAGGATCTGATGAATACTATTATTAATATGACCGCCGCAGCGTCCATGCTTCC                    <  SRR4302543.142495/94‑1 (MQ=60)

                                                                              CCCGCTGATGATTATCC‑CGATGCTCGGTTCCAATACCGTGCAGGATCTGATGAATACTATTATTAATATGACCGCCGCAGCGTCCATGCTTCCG                   >  SRR4302543.756936/1‑94 (MQ=60)

                                                                               CCGCTGATGATTATCC‑CGATGCTCGGTTCCAATACCGTGCAGGATCTGATGAATACTATTATTAATATGACCGCCGCAGCGTCCATGCTTCCGC                  >  SRR4302543.2229853/1‑94 (MQ=60)

                                                                               CCGCTGATGATTATCC‑CGATGCTCGGTTCCAATACCGTGCAGGATCTGATGAATACTATTATTAATATGACCGCCGCAGCGTCCATGCTTCCGC                  <  SRR4302543.2751262/94‑1 (MQ=60)

                                                                               CCGCTGATGATTATCC‑CGACGCTCGGTTCCAATACCGTGCAGGATCTGATGAATACTATTATTAATATGACCGCCGCAGCGTCCATGCTTCCGC                  >  SRR4302543.4354930/1‑94 (MQ=60)

                                                                                 GCTGATGATTATCC‑CGATGCTCGGTTCCAATACCGTGCAGGATCTGATGAATACTATTATTAATATGACCGCCGCAGCGTCCATGCTTCCGCCG                >  SRR4302543.2786331/1‑94 (MQ=60)

                                                                                  CTGATGATTATCC‑CGATGCTCGGTTCCAATACCGTGCAGGATCTGATGAATACTATTATTAATATGACCGCCGCAGCGTCCATGCTTCCGCCGT               >  SRR4302543.5269962/1‑94 (MQ=60)

                                                                                   TGATGATTATCC‑CGATGCTCGGTTCCAATACCGTGCAGGATCTGATGAATACTATTATTAATATGACCGCCGCAGCGTCCATGCTTCCGCCGTT              >  SRR4302543.4223316/1‑94 (MQ=60)

                                                                                   TGATGATTATCC‑CGATGCTCGGTTCCAATACCGTGCAGGATCTGATGAATACTATTATTAATATGACCGCCGCAGCGTCCATGCTTCCGCCGTT              <  SRR4302543.6814755/94‑1 (MQ=60)

                                                                                    GATGATTATCC‑CGATGCTCGGTTCCAATACCGTGCAGGATCTGATGAATACTATTATTAATATGACCGCCGCAGCGTCCATGCTTCCGCCGTTA             <  SRR4302543.5628991/94‑1 (MQ=60)

                                                                                    GATGATTATCC‑CGATGCTCGGTTCCAATACCGTGCAGGATCTGATGAATACTATTATTAATATGACCGCCGCAGCGTCCATGCTTCCGCCGTTA             <  SRR4302543.6888661/94‑1 (MQ=60)

                                                                                    GATGATTATCC‑CGATGCTCGCTTCCAATCCCGTGGAGGATCTGATTAATACTATTATTAATATGACCGCCGCAGCGTCCATGCTTCCGCCGTTA             <  SRR4302543.6888660/94‑1 (MQ=60)

                                                                                     ATGATTATCC‑CGATGCTCGGTTCCAATACCGTGCAGGATCTGATGAATACTATTATTAATATGACCGCCGCAGCGTCCATGCTTCCGCCGTTAT            >  SRR4302543.1925971/1‑94 (MQ=60)

                                                                                     ATGATTATCC‑CGATGCTCGGTTCCAATACCGTGCAGGATCTGATGAATACTATTATTAATATGACCGCCGCAGCGTCCATGCTTCCGCCGTTAT            >  SRR4302543.5888204/1‑94 (MQ=60)

                                                                                       GATTATCC‑CGATGCTCGGTTCCAATACCGTGCAGGATCTGATGAATACTATTATTAATATGACCGCCGCAGCGTCCATGCTTCCGCCGTTATTC          >  SRR4302543.3348734/1‑94 (MQ=60)

                                                                                         TTATCC‑CGATGCTCGGTTCCAATACCGTGCAGGATCTGATGAATACTATTATTAATATGACCGCCGCAGCGTCCATGCTTCCGCCGTTATTCAT        <  SRR4302543.5308284/94‑1 (MQ=60)

                                                                                           atcC‑CGATGCTCGGTTCCAATACCGTGCAGGATCTGATGAATACTATTATTAATATGACCGCCGCAGCGTCCATGCTTCCGCCGTTATTCATCA      >  SRR4302543.384041/4‑94 (MQ=60)

                                                                                           atcC‑CGATGCTCGGTTCCAATACCGTGCAGGATCTGATGAATACTATTATTAATATGACCGCCGCAGCGTCCATGCTTCCGCCGTTATTCATCA      <  SRR4302543.5098631/91‑1 (MQ=60)

                                                                                            tcC‑CGATGCTCGGTTCCAATACCGTGCAGGATCTGATGAATACTATTATTAATATGACCGCCGCAGCGTCCATGCTTCCGCCGTTATTCATCAT     <  SRR4302543.4587452/92‑1 (MQ=60)

                                                                                            tcC‑CGATGCTCGGTTCCAATACCGTGCAGGATCTGATGAATACTATTATTAATATGACCGCCGCAGCGTCCATGCTTCCGCCGTTATTCATCAT     <  SRR4302543.3498099/92‑1 (MQ=60)

                                                                                            C‑C‑CGATGCTCGGTTCCAATACCGTGCAGGATCTGATGAATACTATTATTAATATGACCGCCGCAGCGTCCATGCTTCCGCCGTTATTCATCATG    <  SRR4302543.6258904/94‑1 (MQ=60)

                                                                                            C‑C‑CGATGCTCGGTTCCAATACCGTGCAGGATCTGATGAATACTATTATTAATATGACCGCCGCAGCGTCCATGCTTCCGCCGTTATTCATCATG    >  SRR4302543.5913170/1‑94 (MQ=60)

                                                                                            C‑C‑CGATGCTCGGTTCCAATACCGTGCAGGATCTGATGAATACTATTATTAATATGACCGCCGCAGCGTCCATGCTTCCGCCGTTATTCATCATG    <  SRR4302543.520133/94‑1 (MQ=60)

                                                                                            C‑C‑CGATGCTCGGTTCCAATACCGTGCAGGATCTGATGAATACTATTATTAATATGACCGCCGCAGCGTCCATGCTTCCGCCGTTATTCATCATG    <  SRR4302543.7121455/94‑1 (MQ=60)

                                                                                            C‑C‑CGATGCTCGGTTCCAATACCGGGCAGGATCTGATGAATACTATTATTAATATGACCGCCGCAGCGTCCATGCTTCCGCCGTTATTCATCATC    >  SRR4302543.4604002/1‑94 (MQ=60)

                                                                                                CGATGCTCGGTTCCAATACCGTGCAGGATCTGATGAATACTATTATTAATATGACCGCCGCAGCGTCCATGCTTCCGCCGTTATTCATCATGCT  <  SRR4302543.563135/94‑1 (MQ=60)

                                                                                                CGATGCTCCGTTCCAATACCGTGCAGGATCTGATGAATACTATTATTAATATGACCGCCGCAGCGTCCATGCTTCCGCCGTTATTCATCATGCT  <  SRR4302543.2702556/94‑1 (MQ=60)

TTTGGTAAGAAAACCGTCGAACTGAACGAAAACGGCGTTCCGGCGCGGCGCAGCGTGGATCCAGTTCCTGATCGTCATCCCGCTGATGATTAT‑C‑CGATGCTCGGTTCCAATACCGTGCAGGATCTGATGAATACTATTATTAATATGACCGCCGCAGCGTCCATGCTTCCGCCGTTATTCATCATGCT  >  NC_000913/3224832‑3225019

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 0 ≤` `ATCG/ATCG` `< 2 ≤` `ATCG/ATCG` `< 26 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`