Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.

ALE, Flask, Isolate	Predicted Mutations	Mean Coverage	Total Reads	Percent Mapped	Mapped Reads	Average Read Length
A1 F1 I1 R1	1696	279.3	15874187	97.8%	15524954	93.0

Breseq alignment

BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	3,339,422	T→C	D172D (GAT→GAC)	yrbH →	putative isomerase

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	3,339,422	0	T	C	99.7%	1001.6 / NA	321	D172D (GAT→GAC)	yrbH	putative isomerase
Reads supporting (aligned to +/- strand): ref base T (0/0); major base C (166/154); minor base A (1/0); total (167/154)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 333 total aligned reads displayed.

TGTGCATCTGTGTGTTAAAGTAGCGAAAGAAGCCTGTCCGTTAGGGCTGGCACCGACCAGCAGCACCACCGCCACGCTGGTTATGGGCGATGCCCTCGCTGTCGCGCTGTTAAAAGCACGCGGCTTTACTGCTGAAGATTTTGCGCTCTCACACCCAGGCGGCGCACTGGGTCGTAAACT  >  NC_000913/3339332‑3339511

tgtgCATCTGTGAGTTAAAGTAGCGAAAGAAGCCTGGCCGTTAGGGCTGGCACCGACCAGCAGCACCACCGCCACGCTGGTTATGGGCGACGc                                                                                         >  2:1762923/1‑93 (MQ=255)

 gtgCATCTGTGTGTTAAAGTAGCGAAAGAAGCCTGTCCGTTAGGGCTGGCACCGACCAGCAGCACCACCGCCACGCTGGTTATGGGCGACGcc                                                                                        <  1:1730022/93‑1 (MQ=255)

 gtgCATCTGTGTGTTAAAGTAGCGAAAGAAGCCTGTCCGTTAGGGCTGGCACCGACCAGCAGCACCACCGCCACGCTGGTTATGGGCGACGcc                                                                                        >  1:4885434/1‑93 (MQ=255)

 gtgCAGCTGGGTGTTAAAGTAGCGAAAGAAGCCTGTCCGTTAGGGCTGGCACCGACCAGCAGCACCACCGCCACGCTGGTTATGGGCGACGcc                                                                                        <  1:3878456/93‑1 (MQ=255)

   gCATCTGTGTGTTAAAGTAGCGAAAGAAGCCTGTCCGTTAGGGCTGGCACCGACCAGCAGCACCACCGCCACGCTGGTTATGGGCGACGCCCt                                                                                      <  1:1316865/93‑1 (MQ=255)

   gCATCTGTGTGTTAAAGTAGCGAAAGAAGCCTGTCCGTTAGGGCTGGCACCGACCAGCAGCACCACCGCCACGCTGGTTATGGGCGACGCCCt                                                                                      >  1:6128430/1‑93 (MQ=255)

   gCATCTGTGTGTTAAAGTAGCGAAAGAAGCCTGTCCGTTAGGGCTGGCACCGACCAGCAGCACCACCGCCACGCTGGTTATGGGCGACGCCCt                                                                                      >  2:6706341/1‑93 (MQ=255)

      tCTGTGTGTTAAAGTAGCGAAAGAAGCCTGTCCGTTAGGGCTGGCACCGACCAGCAGCACCACCGCCACGCTGGTTATGGGCGACGCCCTCGc                                                                                   <  2:1061168/93‑1 (MQ=255)

      tCTGTGTGTTAAAGTAGCGAAAGAAGCCTGTCCGTTAGGGCTGGCACCGACCAGCAGCACCACCGCCACGCTGGTTATGGGCGACGCCCTCGc                                                                                   <  2:2801219/93‑1 (MQ=255)

        tgtgtgTTAAAGTAGCGAAAGAAGCCTGTCCGTTAGGGCTGGCACCGACCAGCAGCACCACCGCCACGCTGGTTATGGGCGACGCCCTCGCTg                                                                                 <  1:5562471/93‑1 (MQ=255)

        tgtgtgTTAAAGTAGCGAAAGAAGCCTGTCCGTTAGGGCTGGCACCGACCAGCAGCACCACCGCCACGCTGGTTATGGGCGACGCCCTCGCTg                                                                                 <  1:4548153/93‑1 (MQ=255)

         gtgtgtTAAAGTAGCGAAAGAAGCCTGTCCGTTAGGGCTGGCACCGACCAGCAGCACCACCGCCACGCTGGTTATGGGCGACGCCCTCGCTGt                                                                                >  2:6883859/1‑93 (MQ=255)

          tgtgtTAAAGTAGCGAAAGCAGCCTGTCCGTTAGGGCTGGCACCGACCAGCAGCACCACCGCCACGCTGGTTATGGGCGACGCCCTCGCTGTc                                                                               <  1:7019173/93‑1 (MQ=255)

          tgtgtTAAAGTAGCGAAAGAAGCCTGTCCGTTAGGGCTGGCACCGACCAGCAGCACCACCGCCACGCTGGTTATGGGCGACGCCCTCGCTGTc                                                                               >  2:1976809/1‑93 (MQ=255)

          tgtgtTAAAGTAGCGAAAGAAGCCTGTCCGTTAGGGCTGGCACCGACCAGCAGCACCACCGCCACGCTGGTTATGGGCGACGCCCTCGCTGTc                                                                               >  2:3282071/1‑93 (MQ=255)

           gtgtTAAAGTAGCGAAAGAAGCCTGTCCGTTAGGGCTGGCACCGACCAGCAGCACCACCGCCACGCTGGTTATGGGCGACGCCCTCGCTGTcg                                                                              <  2:1846577/93‑1 (MQ=255)

           gtgtTAAAGTAGCGAAAGAAGCCTGTCCGTTAGGGCTGGCACCGACCAGCAGCACCACCGCCACGCTGGTTATGGGCGACGCCCTCGCTGTcg                                                                              >  2:7306434/1‑93 (MQ=255)

            tgtTAAAGTAGCGAAAGAAGCCTGTCCGTTAGGGCTGGCACCGACCAGCAGCACCACCGCCACGCTGGTTATGGGCGACGCCCTCGCTGTcgc                                                                             >  1:7232578/1‑93 (MQ=255)

             gtTAAAGTAGCGAAAGAAGCCTGTCCGTTAGGGCTGGCACCGACCAGCAGCACCACCGCCACGCTGGTTATGGGCGACGCCCTCGCTGTcgcg                                                                            >  2:5618662/1‑93 (MQ=255)

             gtTAAAGTAGCGAAAGAAGCCTGTCCGTTAGGGCTGGCACCGACCAGCAGCACCACCGCCACGCTGGTTATGGGCGACGCCCTCGCTGTcgcg                                                                            >  2:424000/1‑93 (MQ=255)

              ttAAAGTAGCGAAAGAAGCCTGTCCGTTAGGGCTGGCACCGACCAGCAGCACCACCGCCACGCTGGTTATGGGCGACGCCCTCGCTGTCgcgc                                                                           >  1:7311965/1‑93 (MQ=255)

                 aaGTAGCGAAAGAAGCCTGTCCGTTAGGGCTGGCACCGACCAGCAGCACCACCGCCACGCTGGTTATGGGCGACGCCCTCGCTGTCGCGCTGt                                                                        <  1:3386787/93‑1 (MQ=255)

                      gCGAAAGAAGCCTGTCCGTTAGGGCTGGCACCGACCAGCAGCACCACCGCCACGCTGGTTATGGGCGACGCCCTCGCTGTCGCGCTGTTaaaa                                                                   <  1:7202304/93‑1 (MQ=255)

                      gCGAAAGAAGCCTGTCCGTTAGGGCTGGCACCGACCAGCAGCACCACCGCCACGCTGGTTATGGGCGACGCCCTCGCTGTCGCGCTGTTaaaa                                                                   <  1:5048986/93‑1 (MQ=255)

                      gCGAAAGAAGCCTGTCCGTTAGGGCTGGCACCGACCAGCAGCACCACCGCCACGCTGGTTATGGGCGACCCCCTCGCTGTCGCGCTGTTaaaa                                                                   <  2:5982489/93‑1 (MQ=255)

                         aaaGAAGCCTGTCCGTTAGGGCTGGCACCGACCAGCAGCACCACCGCCACGCTGGTTATGGGCGACGCCCTCGCTGTCGCGCTGTTAAAAGCa                                                                <  2:4449291/93‑1 (MQ=255)

                         aaaGAAGCCTGTCCGTTAGGGCTGGCACCGACCAGCAGCACCACCGCCACGCTGGTTATGGGCGACGCCCTCGCTGTCGCGCTGTTAAAAGCa                                                                >  1:1579823/1‑93 (MQ=255)

                         aaaGAAGCCTGTCCGTTAGGGCTGGCACCGACCAGCAGCACCACCGCCACGCTGGTTATGGGCGACGCCCTCGCTGTCGCGCTGTTAAAAGCa                                                                <  2:7075796/93‑1 (MQ=255)

                          aagaagCCTGTCCGTTAGGGCTGGCACCGACCAGCAGCACCACCGCCACGCTGGTTATGGGCGACGCCCTCGCTGTCGCGCTGTTAAAAGCAc                                                               >  2:121497/1‑93 (MQ=255)

                          aagaagCCTGTCCGTTAGGGCTGGCACCGACCAGCAGCACCACCGCCACGCTGGTTATGGGCGACGCCCTCGCTGTCGCGCTGTTAAAAGCAc                                                               >  1:6075901/1‑93 (MQ=255)

                            gaagCCTGTCCGTTAGGGCTGGCACCGACCAGCAGCACCACCGCCACGCTGGTTATGGGCGACGCCCTCGCTGTCGCGCTGTTAAAAGCAcgc                                                             >  1:4234101/1‑93 (MQ=255)

                            gaagCCTGTCCGTTAGGGCTGGCACCGACCAGCAGCACCACCGCCACGCTGGTTATGGGCGACGCCCTCGCTGTCGCGCTGTTAAAAGCAcgc                                                             <  2:403926/93‑1 (MQ=255)

                            gaagCCTGTCCGTTAGGGCTGGCACCGACCAGCAGCACCACCGCCACGCTGGTTATGGGCGACGCCCTCGCTGTCGCGCTGTTAAAAGCAcgc                                                             <  2:608830/93‑1 (MQ=255)

                            gaagCCTGTCCGTTAGGGCTGGCACCGACCAGCAGCACCACCGCCACGCTGGTTATGGGCGACGCCCTCGCTGTCGCGCTGTTAAAAGCAcgc                                                             >  2:1689108/1‑93 (MQ=255)

                            gaagCCTGTCCGTTAGGGCTGGCACCGACCAGCAGCACCACCGCCACGCTGGTTATGGGCGACGCCCTCGCTGTCGCGCTGTTAAAAGCAcgc                                                             <  2:1331851/93‑1 (MQ=255)

                            gaagCCTGTCCGTTAGGGCTGGCACCGACCAGCAGCACCACCGCCACGCTGGTTATGGGCGACGCCCTCGCTGTCGCGCTGTTAAAAGCAcgc                                                             <  1:6890525/93‑1 (MQ=255)

                             aagCCTGTCCGTTAGGGCTGGCACCGACCAGCAGCACCACCGCCACGCTGGTTATGGGCGACGCCCTCGCTGTCGCGCTGTTAAAAGCAcgcg                                                            <  2:5476183/93‑1 (MQ=255)

                              agCCTGTCCGTTAGGGCTGGCACCGACCAGCAGCACCACCGCCACGCTGGTTATGGGCGACGCCCTCGCTGTCGCGCTGTTAAAAGCACGCgg                                                           >  1:287356/1‑93 (MQ=255)

                              agCCTGTCCGTTAGGGCTGGCACCGACCAGCAGCACCACCGCCACGCTGGTTATGGGCGACGCCCTCGCTGTCGCGCTGTTAAAAGCACGCgg                                                           >  2:3898209/1‑93 (MQ=255)

                               gCCTGTCCGTTAGGGCTGGCACCGACCAGCAGCACCACCGCCACGCTGGTTATGGGCGACGCCCTCGCTGTCGCGCTGTTAAAAGCACGCGGc                                                          >  2:3638258/1‑93 (MQ=255)

                                ccTGTCCGTTAGGGCTGGCACCGACCAGCAGCACCACCGCCACGCTGGTTATGGGCGACGCCCTCGCTGTCGCGCTGTTAAAAGCACGCGGCt                                                         <  2:2443894/93‑1 (MQ=255)

                                 cTGTCCGTTAGGGCTGGCACCGACCAGCAGCACCACCGCCACGCTGGTTATGGGCGACGCCCTCGCTGTCGCGCTGTTAAAAGCACGCGGCtt                                                        >  1:115571/1‑93 (MQ=255)

                                 cTGTCCGTTAGGGCTGGCACCGACCAGCAGCACCACCGCCACGCTGGTTATGGGCGACGCCCTCGCTGTCGCGCTGTTAAAAGCACGCGGCtt                                                        <  1:3807971/93‑1 (MQ=255)

                                  tGTCCGTTAGGGCTGGCACCGACCAGCAGCACCACCGCCACGCTGGTTATGGGCGACGCCCTCGCTGTCGCGCTGTTAAAAGCACGCGGCttt                                                       >  2:7902861/1‑93 (MQ=255)

                                   gTCCGTTAGGGCTGGCACCGACCAGCAGCACCACCGCCACGCTGGTTATGGGCGACGCCCTCGCTGTCGCGCTGTTAAAAGCACGCGGCTTTa                                                      >  2:7556753/1‑93 (MQ=255)

                                     ccGTTAGGGCTGGCACCGACCAGCAGCACCACCGCCACGCTGGTTATGGGCGACGCCCTCGCTGTCGCGCTGTTAAAAGCACGCGGCTTTAct                                                    <  1:4107245/93‑1 (MQ=255)

                                      cGTTAGGGCTGGCACCGACCAGCAGCACCACCGCCACGCTGGTTATGGGCGACGCCCTCGCTGTCGCGCTGTTAAAAGCACGCGGCTTTActg                                                   >  2:12582/1‑93 (MQ=255)

                                       gTTAGGGCTGGCACCGACCAGCAGCACCACCGCCACGCTGGTTATGGGCGACGCCCTCGCTGTCGCGCTGTTAAAAGCACGCGGCTTTActgc                                                  >  2:7114445/1‑93 (MQ=255)

                                       gTTAGGGCTGGCACCGACCAGCAGCACCACCGCCACGCTGGTTATGGGCGACGCCCTCGCTGTCGCGCTGTTAAAAGCACGCGGCTTTActgc                                                  >  1:4084185/1‑93 (MQ=255)

                                        ttAGGGCTGGCACCGACCAGCAGCACCACCGCCACGCTGGTTATGGGCGACGCCCTCGCTGTCGCGCTGTTAAAAGCACGCGGCTTTActgct                                                 >  2:4712355/1‑93 (MQ=255)

                                           gggCTGGCACCGACCAGCAGCACCACCGCCACGCTGGTTATGGGCGACGCCCTCGCTGTCGCGCTGTTAAAAGCACGCGGCTTTACTGCTGaa                                              <  1:6405792/93‑1 (MQ=255)

                                           gggCTGGCACCGACCAGCAGCACCACCGCCACGCTGGTTATGGGCGACGCCCTCGCTGTCGCGCTGTTAAAAGCACGCGGCTTTACTGCTGaa                                              <  2:2750157/93‑1 (MQ=255)

                                           ggccTGGCCCCGACCAGCAGCACCACCGCCACGCTGGTTATGGGCGACGCCCTCGCTGTCGCGCTGTTAAAAGCACGCGGCTTTACTGCTGaa                                              <  2:5963423/90‑1 (MQ=255)

                                              cTGGCACCGACCAGCAGCACCACCGCCACGCTGGTTATGGGCGACGCCCTCGCTGTCGCGCTGTTAAAAGCACGCGGCTTTACTGCTGAAGAt                                           >  2:2075953/1‑93 (MQ=255)

                                              cTGGCACCGACCAGCAGCACCACCGCCACGCTGGTTATGGGCGACGCCCTCGCTGTCGCGCTGTTAAAAGCACGCGGCTTTACTGCTGAAGAt                                           <  1:5454617/93‑1 (MQ=255)

                                               tGGCACCGACCAGCAGCACCACCGCCACGCTGGTTATGGGCGACGCCCTCGCTGTCGCGCTGTTAAAAGCACGCGGCTTTACTGCTGAAGAtt                                          >  1:3599028/1‑93 (MQ=255)

                                                ggCACCGACCAGCAGCACCACCGCCACGCTGGTTATGGGCGACGCCCTCGCTGTCGCGCTGTTAAAAGCACGCGGCTTTACTGCTGAAGAttt                                         >  2:5715768/1‑93 (MQ=255)

                                                ggCACCGACCAGCAGCACCACCGCCACGCTGGTTATGGGCGACGCCCTCGCTGTCGCGCTGTTAAAAGCACGCGGCTTTACTGCTGAAGAttt                                         <  2:5256045/93‑1 (MQ=255)

                                                ggCACCGACCAGCAGCACCACCGCCACGCTGGTTATGGGCGACGCCCTCGCTGTCGCGCTGTTAAAAGCACGCGGCTTTACTGCTGAAGAttt                                         <  2:2627599/93‑1 (MQ=255)

                                                ggCACAGACCAGCAGCACCACCGCCACGCTGGTTATGGGCGACGCCCTCGCTGTCGCGCTGTTAAAAGCACGCGGCTTTACTGCTGAAGAttt                                         <  2:4628300/93‑1 (MQ=255)

                                                 gCACCGACCAGCAGCACCACCGCCACGCTGGTTATGGGCGACGCCCTCGCTGTCGCTCTGTTAAAAGCACGCGGCTTTACTGCTGAAGAtttt                                        <  1:2805219/93‑1 (MQ=255)

                                                 gCACCGACCAGCAGCACCACCGCCACGCTGGTTATGGGCGACGCCCTCGCTGTCGCGCTGTTAAAAGCACGCGGCTTTACTGCTGAAGAtttt                                        >  1:3461238/1‑93 (MQ=255)

                                                  cACCGACCAGCAGCACCACCGCCACGCTGGTTATGGGCGACGCCCTCGCTGTCGCGCTGTTAAAAGCACGCGGCTTTACTGCTGAAGATTTTg                                       >  1:5927818/1‑93 (MQ=255)

                                                   aCCGACCAGCAGCACCACCGCCACGCTGGTTATGGGCGACGCCCTCGCTGTCGCGCTGTTAAAAGCACGCGGCTTTACTGCTGAAGATTTTgc                                      <  2:2395732/93‑1 (MQ=255)

                                                     cGACCAGCAGCACCACCGCCACGCTGGTTATGGGCGACGCCCTCGCTGTCGCGCTGTTAAAAGCACGCGGCTTTACTGCTGAAGATTTTgcgc                                    >  1:1461521/1‑93 (MQ=255)

                                                      gACCAGCAGCACCACCGCCACGCTGGTTATGGGCGACGCCCTCGCTGTCGCGCTGTTAAAAGCACGCGGCTTTACTGCTGAAGATTTTGCGct                                   >  2:5372068/1‑93 (MQ=255)

                                                      gACCAGCAGCACCACCGCCACGCTGGTTATGGGCGACGCCCTCGCTGTCGCGCTGTTAAAAGCACGCGGCTTTACTGCTGAAGATTTTGCGct                                   >  2:624886/1‑93 (MQ=255)

                                                       aCCAGCAGCACCACCGCCACGCTGGTTATGGGCGACGCCCTCGCTGTCGCGCTGTTAAAAGCACGCGGCTTTACTGCTGAAGATTTTGCGctc                                  >  1:2505519/1‑93 (MQ=255)

                                                        ccAGCAGCACCACCGCCACGCTGGTTATGGGCGACGCCCTCGCTGTCGCGCTGTTAAAAGCACGCGGCTTTACTGCTGAAGATTTTGCGctct                                 <  1:5677268/93‑1 (MQ=255)

                                                        ccAGCAGCACCACCGCCACGCTGGTTATGGGCGACGCCCTCGCTGTCGCGCTGTTAAAAGCACGCGGCTTTACTGCTGAAGATTTTGCGctct                                 <  1:3292588/93‑1 (MQ=255)

                                                         cagcagCACCACCGCCACGCTGGTTATGGGCGACGCCCTCGCTGTCGCGCTGTTAAAAGCACGCGGCTTTACTGCTGAAGATTTTGCGCtctc                                <  1:6454305/93‑1 (MQ=255)

                                                         cagcagCACCACCGCCACGCTGGTTATGGGCGACGCCCTCGCTGTCGCGCTGTTAAAAGCACGCGGCTTTACTGCTGAAGATTTTGCGCtctc                                >  1:1925251/1‑93 (MQ=255)

                                                          agcagcACCACCGCCACGCTGGTTATGGGCGACGCCCTCGCTGTCGCGCTGTTAAAAGCACGCGGCTTTACTGCTGAAGATTTTGCGCTCTca                               <  2:6987038/93‑1 (MQ=255)

                                                          agcagcACCACCGCCACGCTGGTTATGGGCGACGCCCTCGCTGTCGCGCTGTTAAAAGCACGCGGCTTTACTGCTGAAGATTTTGCGCTCTca                               <  2:3811819/93‑1 (MQ=255)

                                                           gcagcaCCACCGCCACGCTGGTTATGGGCGACGCCCTCGCTGTCGCGCTGTTAAAAGCACGCGGCTTTACTGCTGAAGATTTTGCGCTCTcac                              >  1:5137682/1‑93 (MQ=255)

                                                             agcaCCACCGCCACGCTGGTTATGGGCGACGCCCTCGCTGTCGCGCTGTTAAAAGCACGCGGCTTTACTGCTGAAGATTTTGCGCTCTCacac                            <  2:3477865/93‑1 (MQ=255)

                                                              gcaCCACCGCCACGCTGGTTATGGGCGACGCCCTCGCTGTCGCGCTGTTAAAAGCACGCGGCTTTACTGCTGAAGATTTTGCGCTCTCACAcc                           >  2:2905260/1‑93 (MQ=255)

                                                              gcaCCACCGCCACGCTGGTTATGGGCGACGCCCTCGCTGTCGCGCTGTTAAAAGCACGCGGCTTTACTGCTGAAGATTTTGCGCTCTCACAcc                           >  1:7082465/1‑93 (MQ=255)

                                                               caccacCGCCACGCTGGTTATGGGCGACGCCCTCGCTGTCGCGCTGTTAAAAGCACGCGGCTTTACTGCTGAAGATTTTGCGCTCTCCCAccc                          >  1:7445400/1‑93 (MQ=255)

                                                               caccacCGCCACGCTGGTTATGGGCGACGCCCTCGCTGTCGCGCTGTTAAAAGCACGCGGCTTTACTGCTGAAGATTTTGCGCTCTCACAccc                          >  2:3076121/1‑93 (MQ=255)

                                                               caccacCGCCACGCTGGTTATGGGCGACGCCCTCGCTGTCGCGCTGTTAAAAGCACGCGGCTTTACTGCTGAAGATTTTGCGCTCTCACAccc                          >  2:650388/1‑93 (MQ=255)

                                                                accaccGCCACGCTGGTTATGGGCGACGCCCTCGCTGTCGCGCTGTTAAAAGCACGCGGCTTTACTGCTGAAGATTTTGCGCTCTCACACCCa                         <  1:7650424/93‑1 (MQ=255)

                                                                accaccGCCACGCTGGTTATGGGCGACGCCCTCGCTGTCGCGCTGTTAAAAGCACGCGGCTTTACTGCTGAAGATTTTGCGCTCTCACACCCa                         >  2:3235395/1‑93 (MQ=255)

                                                                  caccGCCACGCTGGTTATGGGCGACGCCCTCGCTGTCGCGCTGTTAAAAGCACGCGGCTTTACTGCTGAAGATTTTGCGCTCTCACACCCAgg                       <  2:3141516/93‑1 (MQ=255)

                                                                   accGCCACGCTGGTTATGGGCGACGCCCTCGCTGTCGCGCTGTTAAAAGCACGCGGCTTTACTGCTGAAGATTTTGCGCTCTCACACCCAggc                      >  1:4772936/1‑93 (MQ=255)

                                                                     cGCCACGCTGGTTATGGGCGACGCCCTCGCTGTCGCGCTGTTAAAAGCACGCGGCTTTACTGCTGAAGATTTTGCGCTCTCACACCCAggcgg                    >  1:6232735/1‑93 (MQ=255)

                                                                        cACGCTGGTTATGGGCGACGCCCTCGCTGTCGCGCTGTTAAAAGCACGCGGCTTTACTGCTGAAGATTTTGCGCTCTCACACCCAGGCGgcgc                 >  2:4869367/1‑93 (MQ=255)

                                                                         aCGCTGGGTATGGGCGACGCCCTCGCTGTCGCGCTGTTAAAAGCACGCGGCTTTACTGCTGAAGATTTTGCGCTCTCACACCCAGGCGGCGCa                <  1:6565311/93‑1 (MQ=255)

                                                                           gCTGGTTATGGGCGACGCCCTCGCTGTCGCGCTGTTAAAAGCACGCGGCTTTACTGCTGAAGATTTTGCGCTCTCACACCCAGGCGGCGCACt              >  2:7646561/1‑93 (MQ=255)

                                                                           gCTGGTTATGGGCGACGCCCTCGCTGTCGCGCTGTTAAAAGCACGCGGCTTTACTGCTGAAGATTTTGCGCTCTCACACCCAGGCGGCGCACt              <  1:7830045/93‑1 (MQ=255)

                                                                            cTGGTTATGGGGGACGCCCTCGCTGTCGCGCTGTTAAAAGCACGCGGCTTTACTGCTGAAGATTTTGCGCTCTCACACCCAGGCGGCGCACTg             >  2:4145498/1‑93 (MQ=255)

                                                                            cTGGTTATGGGCGACGCCCTCGCTGTCGCGCTGTTAAAAGCACGCGGCTTTACTGCTGAAGATTTTGCGCTCTCACACCCAGGCGGCGCACTg             <  1:3030732/93‑1 (MQ=255)

                                                                            cTGGTTATGGGCGACGCCCTCGCTGTCGCGCTGTTAAAAGCACGCGGCTTTACTGCTGAAGATTTTGCGCTCTCACACCCAGGCGGCGCACTg             <  1:2021032/93‑1 (MQ=255)

                                                                             tGGTTATGGGCGACGCCCTCGCTGTCGCGCTGTTAAAAGCACGCGGCTTTACTGCTGAAGATTTTGCGCTCTCACACCCAGGCGGCGCACTgg            >  1:951245/1‑93 (MQ=255)

                                                                              ggTTATGGGCGACGCCCTCGCTGTCGCGCTGTTAAAAGCACGCGGCTTTACTGCTGAAGATTTTGCGCTCTCACACCCAGGCGGCGCACTggg           <  2:7210692/93‑1 (MQ=255)

                                                                              ggTTATGGGCGACGCCCTCGCTGTCGCGCTGATAAAAGCACGCGGCTTTACTGCTGCAGATTTTGCGCTCTCACACCCAGGCGGCGCACTggg           >  2:4562084/1‑93 (MQ=255)

                                                                                ttATGGGCGACGCCCTCGCTGTCGCGCTGTTAAAAGCACGCGGCTTTACTGCTGAAGATTTTGCGCTCTCACACCCAGGCGGCGCACTGGGTc         >  2:1641931/1‑93 (MQ=255)

                                                                                 tATGGGCGACGCCCTCGCTGTCGCGCTGTTAAAAGCACGCGGCTTTACTGCTGAAGATTTTGCGCTCTCACACCCAGGCGGCGCACTGGGTCg        <  1:2401126/93‑1 (MQ=255)

                                                                                     ggCGACGCCCTCGCTGTCGCGCTGTTAAAAGCACGCGGCTTTACTGCTGAAGATTTTGCGCTCTCACACCCAGGCGGCGCACTGGGTCGTaaa    <  1:2835339/93‑1 (MQ=255)

                                                                                      gCGACGCCCTCGCTGTCGCGCTGTTAAAAGCACGCGGCTTTACTGCTGAAGATTTTGCGCTCTCACACCCAGGCGGCGCACTGGGTCGTAAAc   <  2:1108246/93‑1 (MQ=255)

TGTGCATCTGTGTGTTAAAGTAGCGAAAGAAGCCTGTCCGTTAGGGCTGGCACCGACCAGCAGCACCACCGCCACGCTGGTTATGGGCGATGCCCTCGCTGTCGCGCTGTTAAAAGCACGCGGCTTTACTGCTGAAGATTTTGCGCTCTCACACCCAGGCGGCGCACTGGGTCGTAAACT  >  NC_000913/3339332‑3339511

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 20 ≤` `ATCG/ATCG` `< 29 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`

GATK/CNVnator alignment

BRESEQ :: bam2aln output

AGATGTGCATCTGTGTGTTAAAGTAGCGAAAGAAGCCTGTCCGTTAGGGCTGGCACCGACCAGCAGCACCACCGCCACGCTGGTTATGGGCGATGCCCTCGCTGTCGCGCTGTTAAAAGCACGCGGCTTTACTGCTGAAGATTTTGCGCTCTCACACCCAGGCGGCGCACTGGGTCGTAAACTTCTG  >  NC_000913/3339329‑3339515

AGATGTGCATCTGTGTGTTAAAGTAGCGAAAGAAGCCTGTCCGTTAGGGCTGGCACCGACCAGCAGCACCACCGCCACGCTGGTTATGGGCGAC                                                                                               <  SRR4302543.4735328/94‑1 (MQ=60)

AGATGTGCATCTGTGTGTTAAAGTAGCGAAAGAAGCCTGTCCGTTAGGGCTGGCACCGACCAGCAGCACCACCGCCACGCTGGTTATGGGCGAC                                                                                               >  SRR4302543.4153408/1‑94 (MQ=60)

AGATGTGCATCTGTGTGTTAAAGTAGCGAAAGAAGCCTGTCCGTTAGGGCTGGCACCGACCAGCAGCACCACCGCCACGCTGGTTATGGGCGAC                                                                                               >  SRR4302543.6459894/1‑94 (MQ=60)

AGATGTGCATCTGTGTGTTAAAGTAGCGAAAGAAGCCTGTCCGTTAGGGCTGGCACCGACCAGCAGCACCACCGCCACGCTGGTTATGGGCGAC                                                                                               <  SRR4302543.6849085/94‑1 (MQ=60)

AGATGTGCATCTGTGTGTTAAAGTAGCGAAAGAAGCCTGTCCGTTAGGGCTGGCACCGACCAGCAGCACCACCGCCACGCTGGTTATGGGCGAC                                                                                               <  SRR4302543.7035706/94‑1 (MQ=60)

AGATGTGCATCTGTGTGTTAAAGTAGCGAAAGAAGCCTGTCCGTTAGGGCTGGCACCGACCAGCAGCACCACCGCCACGCTGGTTATGGGCGAC                                                                                               >  SRR4302543.7655340/1‑94 (MQ=60)

 GATGTGCATCTGTGTGTTAAAGTAGCGAAAGAAGCCTGTCCGTTAGGGCTGGCACCGACCAGCAGCACCACCGCCACGCTGGTTATGGGCGACG                                                                                              <  SRR4302543.7187396/94‑1 (MQ=60)

   TGTGCATCTGTGTGTTAAAGTAGCGAAAGAAGCCTGTCCGTTAGGGCTGGCACCGACCAGCAGCACCACCGCCACGCTGGTTATGGGCGACGCC                                                                                            >  SRR4302543.3283522/1‑94 (MQ=60)

   TGTGCATCTGTGTGTTAAAGTAGCGAAAGAAGCCTGTCCGTTAGGGCTGGCACCGACCAGCAGCACCACCGCCACGCTGGTTATGGGCGACGCC                                                                                            >  SRR4302543.4929968/1‑94 (MQ=60)

    GTGCATCTGTGTGTTAAAGTAGCGAAAGAAGCCTGTCCGTTAGGGCTGGCACCGACCAGCAGCACCACCGCCACGCTGGTTATGGGCGACGCCC                                                                                           <  SRR4302543.1745446/94‑1 (MQ=60)

    GTGCAGCTGGGTGTTAAAGTAGCGAAAGAAGCCTGTCCGTTAGGGCTGGCACCGACCAGCAGCACCACCGCCACGCTGGTTATGGGCGACGCCC                                                                                           <  SRR4302543.3912699/94‑1 (MQ=60)

     TGCATCTGTGTGTTAAAGTAGCGAAAGAAGCCTGTCCGTTAGGGCTGGCACCGACCAGCAGCACCACCGCCACGCTGGTTATGGGCGACGCCCT                                                                                          >  SRR4302543.6186479/1‑94 (MQ=60)

      GCATCTGTGTGTTAAAGTAGCGAAAGAAGCCTGTCCGTTAGGGCTGGCACCGACCAGCAGCACCACCGCCACGCTGGTTATGGGCGACGCCCTC                                                                                         <  SRR4302543.7997736/94‑1 (MQ=60)

      GCATCTGTGTGTTAAAGTAGCGAAAGAAGCCTGTCCGTTAGGGCTGGCACCGACCAGCAGCACCACCGCCACGCTGGTTATGGGCGACGCCCTC                                                                                         >  SRR4302543.3141830/1‑94 (MQ=60)

      GCATCTGTGTGTTAAAGTAGCGAAAGAAGCCTGTCCGTTAGGGCTGGCACCGACCAGCAGCACCACCGCCACGCTGGTTATGGGCGACGCCCTC                                                                                         <  SRR4302543.1328569/94‑1 (MQ=60)

       CATCTGTGTGTTAAAGTAGCGAAAGAAGCCTGTCCGTTAGGGCTGGCACCGACCAGCAGCACCACCGCCACGCTGGTTATGGGGGACGCCCTCG                                                                                        >  SRR4302543.1643600/1‑94 (MQ=60)

       CATCTGTGTGTTAAAGTAGCGAAAGAAGCCTGTCCGTTAGGGCTGGCACCGACCAGCAGCACCACCGCCACGCTGGTTATGGGCGACGCCCTCG                                                                                        >  SRR4302543.125892/1‑94 (MQ=60)

       CATCTGTGTGTTAAAGTAGCGAAAGAAGCCTGTCCGTTAGGGCTGGCACCGACCAGCAGCACCACCGCCACGCTGGTTATGGGCGACGCCCTCG                                                                                        >  SRR4302543.2835876/1‑94 (MQ=60)

        ATCTGTGTGTTAAAGTAGCGAAAGAAGCCTGTCCGTTAGGGCTGGCACCGACCAGCAGCACCACCGCCACGCTGGTTATGGGCGACGCCCTCGC                                                                                       >  SRR4302543.7790788/1‑94 (MQ=60)

        ATCTGTGTGTTAAAGTAGCGAAAGAAGCCTGTCCGTTAGGGCTGGCACCGACCAGCAGCACCACCGCCACGCTGGTTATGGGCGACGCCCTCGC                                                                                       >  SRR4302543.1352265/1‑94 (MQ=60)

        ATCTGTGTGTTAAAGTAGCGAAAGAAGCCTGTCCGTTAGGGCTGGCACCGACCAGCAGCACCACCGCCACGCTGGTTATGGGCGACGCCCTCGC                                                                                       <  SRR4302543.1910290/94‑1 (MQ=60)

         TCTGTGTGTTAAAGTAGCGAAAGAAGCCTGTCCGTTAGGGCTGGCACCGACCAGCAGCACCACCGCCACGCTGGTTATGGGCGACGCCCTCGCT                                                                                      <  SRR4302543.2514579/94‑1 (MQ=60)

          CTGTGTGTTAAAGTAGCGAAAGAAGCCTGTCCGTTAGGGCTGGCACCGACCAGCAGCACCACCGCCACGCTGGTTATGGGCGACGCCCTCGCTG                                                                                     >  SRR4302543.2411818/1‑94 (MQ=60)

           TGTGTGTTAAAGTAGCGAAAGAAGCCTGTCCGTTAGGGCTGGCACCGACCAGCAGCACCACCGCCACGCTGGTTATGGGCGACGCCCTCGCTGT                                                                                    <  SRR4302543.4589573/94‑1 (MQ=60)

           TGTGTGTTAAAGTAGCGAAAGAAGCCTGTCCGTTAGGGCTGGCACCGACCAGCAGCACCACCGCCACGCTGGTTATGGGCGACGCCCTCGCTGT                                                                                    <  SRR4302543.5613062/94‑1 (MQ=60)

            GTGTGTTAAAGTAGCGAAAGAAGCCTGTCCGTTAGGGCTGGCACCGACCAGCAGCACCACCGCCACGCTGGTTATGGGCGACGCCCTCGCTGTC                                                                                   >  SRR4302543.3489806/1‑94 (MQ=60)

            GTGTGTTAAAGTAGCGAAAGAAGCCTGTCCGTTAGGGCTGGCACCGACCAGCAGCACCACCGCCACGCTGGGTATGGGCGAAGCCCTCGCTGTC                                                                                   >  SRR4302543.3489803/1‑94 (MQ=60)

             TGTGTTAAAGTAGCGAAAGCAGCCTGTCCGTTAGGGCTGGCACCGACCAGCAGCACCACCGCCACGCTGGTTATGGGCGACGCCCTCGCTGTCG                                                                                  <  SRR4302543.7086329/94‑1 (MQ=60)

             TGTGTTAAAGTAGCGAAAGAAGCCTGTCCGTTAGGGCTGGCACCGACCAGCAGCACCACCGCCACGCTGGTTATGGGCGACGCCCTCGCTGTCG                                                                                  >  SRR4302543.5551033/1‑94 (MQ=60)

             TGTGTTAAAGTAGCGAAAGAAGCCTGTCCGTTAGGGCTGGCACCGACCAGCAGCACCACCGCCACGCTGGTTATGGGCGACGCCCTCGCTGTCG                                                                                  <  SRR4302543.1439692/94‑1 (MQ=60)

              GTGTTAAAGTAGCGAAAGAAGCCTGTCCGTTAGGGCTGGCACCGACCAGCAGCACCACCGCCACGCTGGTTATGGGCGACGCCCTCGCTGTCGC                                                                                 >  SRR4302543.7302620/1‑94 (MQ=60)

                GTTAAAGTAGCGAAAGAAGCCTGTCCGTTAGGGCTGGCACCGACCAGCAGCACCACCGCCACGCTGGTTATGGGCGACGCCCTCGCTGTCGCGC                                                                               >  SRR4302543.7382441/1‑94 (MQ=60)

                GTTAAAGTAGCGAAAGAAGCCTGTCCGTTAGGGCTGGCACCGACCAGCAGCACCACCGCCACGCTGGTTATGGGCGACGCCCTCGCTGTCGCGC                                                                               >  SRR4302543.3954403/1‑94 (MQ=60)

                GTTAAAGTAGCGAAAGAAGCCTGTCCGTTAGGGCTGGCACCGACCAGCAGCACCACCGCCACGCTGGTTATGGGCGACGCCCTCGCTGTCGCGC                                                                               >  SRR4302543.2442471/1‑94 (MQ=60)

                 TTAAAGTAGCGAAAGAAGCCTGTCCGTTAGGGCTGGCACCGACCAGCAGCACCACCGCCACGCTGGTTATGGGCGACGCCCTCGCTGTCGCGCT                                                                              >  SRR4302543.6056631/1‑94 (MQ=60)

                 TTAAAGTAGCGAAAGAAGCCTGTCCGTTAGGGCTGGCACCGACCAGCAGCACCACCGCCACGCTGGTTATGGGCGACGCCCTCGCTGTCGCGCT                                                                              <  SRR4302543.3796190/94‑1 (MQ=60)

                  TAAAGTAGCGAAAGAAGCCTGTCCGTTAGGGCTGGCACCGACCAGCAGCACCACCGCCACGCTGGTTATGGGCGACGCCCTCGCTGTCGCGCTG                                                                             <  SRR4302543.7371348/94‑1 (MQ=60)

                  TAAAGTAGCGAAAGAAGCCTGTCCGTTAGGGCTGGCACCGACCAGCAGCACCACCGCCACGCTGGTTATGGGCGACGCCCTCGCTGTCGCGCTG                                                                             <  SRR4302543.5316741/94‑1 (MQ=60)

                  TAAAGTAGCGAAAGAAGCCTGTCCGTTAGGGCAGGCACCGACCAGCAGCACCACCGCCACGCTGGTTATGGGCGACGCCCTCGCTGTCGCGCTG                                                                             <  SRR4302543.6720861/94‑1 (MQ=60)

                    AAGTAGCGAAAGAAGCCTGTCCGTTAGGGCTGGCACCGACCAGCAGCACCACCGCCACGCTGGTTATGGGCGACGCCCTCGCTGTCGCGCTGTT                                                                           <  SRR4302543.3417154/94‑1 (MQ=60)

                        AGCGAAAGAAGCCTGTCCGTTAGGGCTGGCACCGACCAGCAGCACCACCGCCACGCTGGTTATGGGCGACGCCCTCGCTGTCGCGCTGTTAAAA                                                                       >  SRR4302543.6585727/1‑94 (MQ=60)

                        AGCGAAAGAAGCCTGTCCGTTAGGGCTGGCACCGACCAGCAGCACCACCGCCACGCTGGTTATGGGCGACGCCCTCGCTGTCGCGCTGTTAAAA                                                                       <  SRR4302543.3628848/94‑1 (MQ=60)

                         GCGAAAGAAGCCTGTCCGTTAGGGCTGGCACCGACCAGCAGCACCACCGCCACGCTGGTTATGGGCGACGCCCTCGCTGTCGCGCTGTTAAAAG                                                                      >  SRR4302543.299939/1‑94 (MQ=60)

                         GCGAAAGAAGCCTGTCCGTTAGGGCTGGCACCGACCAGCAGCACCACCGCCACGCTGGTTATGGGCGACGCCCTCGCTGTCGCGCTGTTAAAAG                                                                      <  SRR4302543.5859215/94‑1 (MQ=60)

                         GCGAAAGAAGCCTGTCCGTTAGGGCTGGCACCGACCAGCAGCACCACCGCCACGCTGGTTATGGGCGACGCCCTCGCTGTCGCGCTGTTAAAAG                                                                      <  SRR4302543.5094893/94‑1 (MQ=60)

                         GCGAAAGAAGCCTGTCCGTTAGGGCTGGCACCGACCAGCAGCACCACCGCCACGCTGGTTATGGGCGACGCCCTCGCTGTCGCGCTGTTAAAAG                                                                      <  SRR4302543.7272132/94‑1 (MQ=60)

                          CGAAAGAAGCCTGTCCGTTAGGGCTGGCCCCGACCAGCAGCACCACCGCCACGCTGGTTATGGGCGACGCCCTCGCTGTCGCGCTGTTAAAAGC                                                                     <  SRR4302543.7109045/94‑1 (MQ=60)

                          CGAAAGAAGCCTGTCCGTTAGGGCTGGCACCGACCAGCAGCACCACCGCCACGCTGGTTATGGGCGACGCCCTCGCTGTCGCGCTGTTAAAAGC                                                                     <  SRR4302543.502583/94‑1 (MQ=60)

                           GAAAGAAGCCTGTCCGTTAGGGCTGGCACCGACCAGCAGCACCACCGCCACGCTGGTTATGGGCGACGCCCTCGCTGTCGCGCTGTTAAAAGCA                                                                    >  SRR4302543.5907367/1‑94 (MQ=60)

                           GAAAGAAGCCTGTCCGTTAGGGCTGGCACCGACCAGCAGCACCACCGCCACGCTGGTTATGGGCGACGCCCTCGCTGTCGCGCTGTTAAAAGCA                                                                    >  SRR4302543.5164723/1‑94 (MQ=60)

                           GAAAGAAGCCTGTCCGTTAGGGCTGGCACCGACCAGCAGCACCACCGCCACGCTGGTTATGGGCGACGCCCTCGCTGTCGCGCTGTTAAAAGCA                                                                    <  SRR4302543.6139521/94‑1 (MQ=60)

                           GAAAGAAGCCTGTCCGTTAGGGCTGGCACCGACCAGCAGCACCACCGCCACGCTGGTTATGGGCGACGCCCTCGCTGTCGCGCTGTTAAAAGCA                                                                    >  SRR4302543.1593924/1‑94 (MQ=60)

                           GAAAGAAGCCTGTCCGTTAGGGCTGGCACCGACCAGCAGCACCACCGCCACGCTGGTTATGGGCGACGCCCTCGCTGTCGCGCTGTTAAAAGCA                                                                    >  SRR4302543.4551383/1‑94 (MQ=60)

                            AAAGAAGCCTGTCCGTTAGGGCTGGCCCCGACCAGCAGCACCACCGCCACGCTGGTTATGGGCGACGCCCTCGCTGTCGCGCTGTTAAAAGCAC                                                                   <  SRR4302543.7269063/94‑1 (MQ=60)

                            AAAGAAGCCTGTCCGTTAGGGCTGGCACCGACCAGCAGCACCACCGCCACGCTGGTTATGGGCGACGCCCTCGCTGTCGCGCTGTTAAAAGCAC                                                                   <  SRR4302543.4095913/94‑1 (MQ=60)

                            AAAGAAGCCTGTCCGTTAGGGCTGGCACCGACCAGCAGCACCACCGCCACGCTGGTTATGGGCGACGCCCTCGCTGTCGCGCTGTTAAAAGCAC                                                                   <  SRR4302543.5332532/94‑1 (MQ=60)

                            AAAGAAGCCTGTCCGTTAGGGCTGGCACCGACCAGCAGCACCACCGCCACGCTGGTTATGGGCGACGCCCTCGCTGTCGCGCTGTTAAAAGCAC                                                                   <  SRR4302543.7269062/94‑1 (MQ=60)

                            AAAGAAGCCTGTCCGTTAGGGCTGGCACCGACCAGCAGCACCACCGCCACGCTGGTTATGGGCGACGCCCTCGCTGTCGCGCTGTTAAAAGCAC                                                                   >  SRR4302543.6133493/1‑94 (MQ=60)

                            AAAGAAGCCTGTCCGTTAGGGCTGGCACCGACCAGCAGCACCACCGCCACGCTGGTTATGGGCGACGCCCTCGCTGTCGCGCTGTTAAAAGCAC                                                                   <  SRR4302543.5542383/94‑1 (MQ=60)

                            AAAGAAGCCTGTCCGTTAGGGCTGGCACCGACCAGCAGCACCACCGCCACGCTGGTTATGGGCGACGCCCTCGCTGTCGCGCTGTTAAAAGCAC                                                                   <  SRR4302543.7627936/94‑1 (MQ=60)

                            AAAGAAGCCTGTCCGTTAGGGCTGGCACCGACCAGCAGCACCACCGCCACGCTGGTTATGGGCGACGCCCTCGCTGTCGCGCTGTTAAAAGCAC                                                                   >  SRR4302543.4726321/1‑94 (MQ=60)

                            AAAGAAGCCTGTCCGTTAGGGCTGGCACAGACCAGCAGCACCACCGCCACGCTGGTTATGGGCGACGCCCTCGCTGTCGCGCTGTTAAAAGCAC                                                                   <  SRR4302543.5086389/94‑1 (MQ=60)

                             AAGAAGCCTGTCCGTTAGGGCTGGCACCGACCAGCAGCACCACCGCCACGCTGGTTATGGGCGACGCCCTCGCTGTCGCGCTGTTAAAAGCACG                                                                  <  SRR4302543.2163428/94‑1 (MQ=60)

                              AGAAGCCTGTCCGTTAGGGCTGGCACCGACCAGCAGCACCACCGCCACGCTGGTTATGGGCGACGCCCTCGCTGTCGCGCTGTTAAAAGCACGC                                                                 >  SRR4302543.4272508/1‑94 (MQ=60)

                               GAAGCCTGTCCGTTAGGGCTGGCACCGACCAGCAGCACCACCGCCACGCTGGTTATGGGCGACGCCCTCGCTGTCGCGCTGTTAAAAGCACGCG                                                                <  SRR4302543.4191942/94‑1 (MQ=60)

                               GAAGCCTGTCCGTTAGGGCTGGCACCGACCAGCAGCACCACCGCCACGCTGGTTATGGGCGACGCCCTCGCTGTCGCGCTGTTAAAAGCACGCG                                                                <  SRR4302543.6955316/94‑1 (MQ=60)

                                AAGCCTGTCCGTTAGGGCTGGCACCGACCAGCAGCACCACCGCCACGCTGGTTATGGGCGACGCCCTCGCTGTCGCGCTGTTAAAAGCACGCGG                                                               >  SRR4302543.289918/1‑94 (MQ=60)

                                  GCCTGTCCGTTAGGGCTGGCACCGACCAGCAGCACCACCGCCACGCTGGTTATGGGCGACGCCCTCGCTGTCGCGCTGTTAAAAGCACGCGGCT                                                             <  SRR4302543.2849241/94‑1 (MQ=60)

                                  GCCTGTCCGTTAGGGCTGGCACCGACCAGCAGCACCACCGCCACGCTGGTTATGGGCGACGCCCTCGCTGTCGCGCTGTTAAAAGCACGCGGCT                                                             >  SRR4302543.1542926/1‑94 (MQ=60)

                                   CCTGTCCGTTAGGGCTGGCACCGACCAGCAGCACCACCGCCACGCTGGTTATGGGCGACGCCCTCGCTGTCGCGCTGTTAAAAGCACGCGGCTT                                                            >  SRR4302543.116619/1‑94 (MQ=60)

                                   CCTGTCCGTTAGGGCTGGCACCGACCAGCAGCACCACCGCCACGCTGGTTATGGGAGACGCCCTCGCTGTCGCGCTGTTAAAAGCACGCGGCTT                                                            >  SRR4302543.116620/1‑94 (MQ=60)

                                    CTGTCCGTTAGGGCTGGCACCGACCAGCAGCACCACCGCCACGCTGGTTATGGGCGACGCCCTCGCTGTCGCGCTGTTAAAAGCACGCGGCTTT                                                           <  SRR4302543.3841546/94‑1 (MQ=60)

                                    CTGTCCGTTAGGGCTGGCACCGACCAGCAGCACCACCGCCACGCTGGTTATGGGCGACGCCCTCGCTGTCGCGCTGTTAAAAGCACGCGGCTTT                                                           >  SRR4302543.3585195/1‑94 (MQ=60)

                                    CTGTCCGTTAGGGCTGGCACCGACCAGCAGCACCACCGCCACGCTGGTTATGGGCGACGCCCTCGCTGTCGCGCTGTTAAAAGCACGCGGCTTT                                                           >  SRR4302543.6038795/1‑94 (MQ=60)

                                    CTGTCCGTTAGGGCTGGCACCGACCAGCAGCACCACCGCCACGCTGGTTATGGGCGACGCCCTCGCTGTCGCGCTGTTAAAAGCACGCGGCTTT                                                           >  SRR4302543.5056708/1‑94 (MQ=60)

                                    CTGTCCGTTAGGGCTGGCACCGACCAGCAGCACCACCGCCACGCTGGTTATGGGCGACGCCCTCGCTGTCGCGCTGTTAAAAGCACGCGGCTTT                                                           >  SRR4302543.2555296/1‑94 (MQ=60)

                                    CTGTCCGTTAGGGCTGGCACCGACCAGCAGCACCACCGCCACGCTGGTTATGGGCGACGCCCTCGCTGTCGCGCTGTTAAAAGCACGCGGCTTT                                                           <  SRR4302543.2350935/94‑1 (MQ=60)

                                    CTGTCCGTTAGGGCTGGCACCGACCAGCAGCACCACCGCCACGCTGGTTATGGGCGACGCCCTCGCTGTCGCGCTGTTAAAAGCACGCGGCTTT                                                           >  SRR4302543.1663320/1‑94 (MQ=60)

                                     TGTCCGTTAGGGCTGGCACCGACCAGCAGCACCACCGCCACGCTGGTTATGGGCGACGCCCTCGCTGTCGCGCTGTTAAAAGCACGCGGCTTTA                                                          <  SRR4302543.7175206/94‑1 (MQ=60)

                                      GTCCGTTAGGGCTGGCACCGACCAGCAGCACCACCGCCACGCTGGTTATGGGCGACGCCCTCGCTGTCGCGCTGTTAAAAGCACGCGGCTTTAC                                                         <  SRR4302543.6956466/94‑1 (MQ=60)

                                      GTCCGTTAGGGCTGGCACCGACCAGCAGCACCACCGCCACGCTGGTTATGGGCGACGCCCTCGCTGTCGCGCTGTTAAAAGCACGCGGCTTTAC                                                         >  SRR4302543.7601784/1‑94 (MQ=60)

                                        CCGTTAGGGCTGGCACCGACCAGCAGCACCACCGCCACGCTGGTTATGGGCGACGCCCTCGCTGTCGCGCTGTTAAAAGCACGCGGCTTTACTG                                                       <  SRR4302543.4144194/94‑1 (MQ=60)

                                         CGTTAGGGCTGGCACCGACCAGCAGCACCACCGCCACGCTGGTTATGGGCGACGCCCTCGCTGTCGCGCTGTTAAAAGCACGCGGCTTTACTGC                                                      >  SRR4302543.4120800/1‑94 (MQ=60)

                                          GTTAGGGCTGGCACCGACCAGCAGCACCACCGCCACGCTGGTTATGGGCGACGCCCTCGCTGTCGCGCTGTTAAAAGCACGCGGCTTTACTGCT                                                     >  SRR4302543.4928931/1‑94 (MQ=60)

                                          GTTAGGGCTGGCACCGACCAGCAGCACCACCGCCACGCTGGTTATGGGCGACGCCCTCGCTGTCGCGCTGTTAAAAGCACGCGGCTTTACTGCT                                                     >  SRR4302543.1960255/1‑94 (MQ=60)

                                          GTTAGGGCTGGCACCGACCAGCAGCACCACCGCCACGCTGGTTATGGGCGACGCCCTCGCTGTCGCGCTGTTAAAAGCACGCGGCTTTACTGCT                                                     >  SRR4302543.150276/1‑94 (MQ=60)

                                          GTTAGGGCTGGCACCGACCAGCAGCACCACCGCCACGCTGGTTATGGGCGACGCCCTCGCTGTCGCGCTGTTAAAAGCACGCGGCTTTACTGCT                                                     <  SRR4302543.4865421/94‑1 (MQ=60)

                                            TAGGGCTGGCACCGACCAGCAGCACCACCGCCACGCTGGTTATGGGCGACGCCCTCGCTGTCGCGCTGTTAAAAGCACGCGGCTTTACTGCTGA                                                   >  SRR4302543.413135/1‑94 (MQ=60)

                                             AGGGCTGGCACCGACCAGCAGCACCACCGCCACGCTGGTTATGGGCGACGCCCTCGCTGTCGCGCTGTTAAAAGCACGCGGCTTTACTGCTGAA                                                  >  SRR4302543.2856341/1‑94 (MQ=60)

                                             AGGGCTGGCACCGACCAGCAGCACCACCGCCACGCTGGTTATGGGCGACGCCCTCGCTGTCGCGCTGTTAAAAGCACGCGGCTTTACTGCTGAA                                                  >  SRR4302543.4127855/1‑94 (MQ=60)

                                              GGGCTGGCACCGACCAGCAGCACCACCGCCACGCTGGTTATGGGCGACGCCCTCGCTGTCGCGCTGTTAAAAGCACGCGGCTTTACTGCTGAAG                                                 <  SRR4302543.6466120/94‑1 (MQ=60)

                                               GGCTGGCACCGACCAGCAGCACCACCGCCACGCTGGTTATGGGCGACGCCCTCGCTGTCGCGCTGTTAAAAGCACGCGGCTTTACTGCTGAAGA                                                >  SRR4302543.2639880/1‑94 (MQ=60)

                                                GCTGGCACCGACCAGCAGCACCACCGCCACGCTGGTTATGGGCGACGCCCTCGCTGTCGCGCTGTTAAAAGCACGCGGCTTTACTGCTGAAGAT                                               <  SRR4302543.6323701/94‑1 (MQ=60)

                                                 CTGGCACCGACCAGCAGCACCACCGCCACGCTGGTTATGGGCGACGCCCTCGCTGTCGCGCTGTTAAAAGCACGCGGCTTTACTGCTGAAGATT                                              <  SRR4302543.5504075/94‑1 (MQ=60)

                                                 CTGGCACCGACCAGCAGCACCACCGCCACGCTGGTTATGGGCGACGCCCTCGCTGTCGCGCTGTTAAAAGCACGCGGCTTTACTGCTGAAGATT                                              <  SRR4302543.3407092/94‑1 (MQ=60)

                                                 CTGGCACCGACCAGCAGCACCACCGCCACGCTGGTTATGGGCGACGCCCTCGCTGTCGCGCTGTTAAAAGCACGCGGCTTTACTGCTGAAGATT                                              >  SRR4302543.3630787/1‑94 (MQ=60)

                                                   TGCACCGCCCAGCAGCACCACCGCCACGCTGGTTATGGGCGACGCCCTCGCTGTCGCGCTGTTAAAAGCACGCGGCTTTACTGCTGAAGATTTT                                            <  SRR4302543.6418564/94‑1 (MQ=60)

                                                   GGCACCGACCAGCAGCACCACCGCCACGCTGGTTATGGGCGACGCCCTCGCTGTCGCGCTGTTAAAAGCACGCGGCTTTACTGCTGAAGATTTT                                            <  SRR4302543.4004068/94‑1 (MQ=60)

                                                   GGCACCGACCAGCAGCACCACCGCCACGCTGGTTATGGGCGACGCCCTCGCTGTCGCGCTGTTAAAAGCACGCGGCTTTACTGCTGAAGATTTT                                            <  SRR4302543.6418562/94‑1 (MQ=60)

                                                   GGCACCGACCAGCAGCACCACCGCCACGCTGGTTATGGGCGACGCCCTCGCTGTCGCGCTGTTAAAAGCACGCGGCTTTACTGCTGAAGATTTT                                            >  SRR4302543.3492241/1‑94 (MQ=60)

                                                    GCACCGACCAGCAGCACCACCGCCACGCTGGTTATGGGCGACGCCCTCGCTGTCGCTCTGTTAAAAGCACGCGGCTTTACTGCTGAAGATTTTG                                           <  SRR4302543.2830886/94‑1 (MQ=60)

                                                    GCACCGACCAGCAGCACCACCGCCACGCTGGTTATGGGCGACGCCCTCGCTGTCGCGCTGTTAAAAGCACGCGGCTTTACTGCTGAAGATTTTG                                           >  SRR4302543.5982008/1‑94 (MQ=60)

                                                    GCACCGACCAGCAGCACCACCGCCACGCTGGTTATGGGCGACGCCCTCGCTGTCGCGCTGTTAAAAGCACGCGGCTTTACTGCTGAAGATTTTG                                           <  SRR4302543.615103/94‑1 (MQ=60)

                                                     CACCGACCAGCAGCACCACCGCCACGCTGGTTATGGGCGACGCCCTCGCTGTCGCGCTGTTAAAAGCACGCGGCTTTACTGCTGAAGATTTTGC                                          <  SRR4302543.7385221/94‑1 (MQ=60)

                                                     CACCGACCAGCAGCACCACCGCCACGCTGGTTATGGGCGACGCCCTCGCTGTCGCGCTGTTAAAAGCACGCGGCTTTACTGCTGAAGATTTTGC                                          >  SRR4302543.647873/1‑94 (MQ=60)

                                                     CACCGACCAGCAGCACCACCGCCACGCTGGTTATGGGCGACGCCCTCGCTGTCGCGCTGTTAAAAGCACGCGGCTTTACTGCTGAAGATTTTGC                                          >  SRR4302543.647874/1‑94 (MQ=60)

                                                      ACCGACCAGCAGCACCACCGCCACGCTGGTTATGGGCGACGCCCTCGCTGTCGCGCTGTTAAAAGCACGCGGCTTTACTGCTGAAGATTTTGCG                                         <  SRR4302543.3365588/94‑1 (MQ=60)

                                                       CCGACCAGCAGCACCACCGCCACGCTGGTTATGGGCGACGCCCTCGCTGTCGCGCTGTTAAAAGCACGCGGCTTTACTGCTGAAGATTTTGCGC                                        >  SRR4302543.1474698/1‑94 (MQ=60)

                                                         GACCAGCAGCACCACCGCCACGCTGGTTATGGGCGACGCCCTCGCTGTCGCGCTGTTAAAAGCACGCGGCTTTACTGCTGAAGATTTTGCGCTC                                      >  SRR4302543.2528270/1‑94 (MQ=60)

                                                         GACCAGCAGCACCACCGCCACGCTGGTTATGGGCGACGCCCTCGCTGTCGCGCTGTTAAAAGCACGCGGCTTTACTGCTGAAGATTTTGCGCTC                                      >  SRR4302543.7957883/1‑94 (MQ=60)

                                                          ACCAGCAGCACCACCGCCACGCTGGTTATGGGGGACGCCCTCGCTGTCGCGCTGTTAAAAGCACGCGGCTTTACTGCTGAAGATTTTGCGCTCT                                     >  SRR4302543.3056198/1‑94 (MQ=60)

                                                           CCAGCAGCACCACCGCCACGCTGGTTATGGGCGACGCCCTCGCTGTCGCGCTGTTAAAAGCACGCGGCTTTACTGCTGAAGATTTTGCGCTCTC                                    <  SRR4302543.7279403/94‑1 (MQ=60)

                                                           CCAGCAGCACCACCGCCACGCTGGTTATGGGCGACGCCCTCGCTGTCGCGCTGTTAAAAGCACGCGGCTTTACTGCTGAAGATTTTGCGCTCTC                                    <  SRR4302543.3322298/94‑1 (MQ=60)

                                                           CCAGCAGCACCACCGCCACGCTGGTTATGGGCGACGCCCTCGCTGTCGCGCTGTTAAAAGCACGCGGCTTTACTGCTGAAGATTTTGCGCTCTC                                    <  SRR4302543.5729090/94‑1 (MQ=60)

                                                           CCAGCAGCACCACCGCCACGCTGGTTATGGGCGACGCCCTCGCTGTCGCGCTGTTAAAAGCACGCGGCTTTACTGCTGAAGATTTTGCGCTCTC                                    >  SRR4302543.1942600/1‑94 (MQ=60)

                                                           CCAGCAGCACCACCGCCACGCTGGTTATGGGCGACGCCCTCGCTGTCGCGCTGTTAAAAGCACGCGGCTTTACTGCTGAAGATTTTGCGCTCTC                                    >  SRR4302543.2873740/1‑94 (MQ=60)

                                                           CCAGCAGCACCACCGCCACGCTGGTTATGGGCGACGCCCTCGCTGTCGCGCTGTTAAAAGCACGCGGCTTTACTGCTGAAGATTTTGCGCTCTC                                    >  SRR4302543.2873741/1‑94 (MQ=60)

                                                            CAGCAGCACCACCGCCACGCTGGTTATGGGCGACGCCCTCGCTGTCGCGCTGTTAAAAGCACGCGGCTTTACTGCTGAAGATTTTGCGCTCTCA                                   <  SRR4302543.6515122/94‑1 (MQ=60)

                                                             AGCAGCACCACCGCCACGCTGGTTATGGGCGACGCCCTCGCTGTCGCGCTGTTAAAAGCACGCGGCTTTACTGCTGAAGATTTTGCGCTCTCAC                                  <  SRR4302543.6118786/94‑1 (MQ=60)

                                                             AGCAGCACCACCGCCACGCTGGTTATGGGCGACGCCCTCGCTGTCGCGCTGTTAAAAGCACGCGGCTTTACTGCTGAAGATTTTGCGCTCTCAC                                  >  SRR4302543.6284681/1‑94 (MQ=60)

                                                             AGCAGCACCACCGCCACGCTGGTTATGGGCGACGCCCTCGCTGTCGCGCTGTTAAAAGCACGCGGCTTTACTGCTGAAGATTTTGCGCTCTCAC                                  <  SRR4302543.5685620/94‑1 (MQ=60)

                                                             AGCAGCACCACCGCCACGCTGGTTATGGGCGACGCCCTCGCTGTCGCGCTGTTAAAAGCACGCGGCTTTACTGCTGAAGATTTTGCGCTCTCAC                                  <  SRR4302543.199005/94‑1 (MQ=60)

                                                             AGCAGCACCACCGCCACGCTGGTTATGGGCGACGCCCTCGCTGTCGCGCTGTTAAAAGCACGCGGCTTTACTGCTGAAGATTTTGCGCTCTCAC                                  >  SRR4302543.5184124/1‑94 (MQ=60)

                                                               CAGCACCACCGCCACGCTGGTTATGGGCGACGCCCTCGCTGTCGCGCTGTTAAAAGCACGCGGCTTTACTGCTGAAGATTTTGCGCTCTCACAC                                <  SRR4302543.7126668/94‑1 (MQ=60)

                                                                AGCACCACCGCCACGCTGGTTATGGGCGACGCCCTCGCTGTCGCGCTGTTAAAAGCACGCGGCTTTACTGCTGAAGATTTTGCGCTCTCACACC                               >  SRR4302543.7151246/1‑94 (MQ=60)

                                                                AGCACCACCGCCACGCTGGTTATGGGCGACGCCCTCGCTGTCGCGCTGTTAAAAGCACGCGGCTTTACTGCTGAAGATTTTGCGCTCTCACACC                               >  SRR4302543.1734977/1‑94 (MQ=60)

                                                                 GCACCACCGCCACGCTGGTTATGGGCGACGCCCTCGCTGTCGCGCTGTTAAAAGCACGCGGCTTTACTGCTGAAGATTTTGCGCTCTCCCACCC                              >  SRR4302543.7516754/1‑94 (MQ=60)

                                                                 GCACCACCGCCACGCTGGTTATGGGCGACGCCCTCGCTGTCGCGCTGTTAAAAGCACGCGGCTTTACTGCTGAAGATTTTGCGCTCTCACACCC                              <  SRR4302543.6524329/94‑1 (MQ=60)

                                                                  CACCACCGCCACGCTGGTTATGGGCGACGCCCTCGCTGTCGCGCTGTTAAAAGCACGCGGCTTTACTGCTGAAGATTTTGCGCTCTCACACCCA                             >  SRR4302543.3675463/1‑94 (MQ=60)

                                                                  CACCACCGCCACGCTGGTTATGGGCGACGCCCTCGCTGTCGCGCTGTTAAAAGCACGCGGCTTTACTGCTGAAGATTTTGCGCTCTCACACCCA                             <  SRR4302543.4249272/94‑1 (MQ=60)

                                                                  CACCACCGCCACGCTGGTTATGGGCGACGCCCTCGCTGTCGCGCTGTTAAAAGCACGCGGCTTTACTGCTGAAGATTTTGCGCTCTCACACCCA                             <  SRR4302543.4487005/94‑1 (MQ=60)

                                                                   ACCACCGCCACGCTGGTTATGGGCGACGCCCTCGCTGTCGCGCTGTTAAAAGCACGCGGCTTTACTGCTGAAGATTTTGCGCTCTCACACCCAG                            <  SRR4302543.7722967/94‑1 (MQ=60)

                                                                    CCACCGCCACGCTGGTTATGGGCGACGCCCTCGCTGTCGCGCTGTTAAAAGCACGCGGCTTTACTGCTGAAGATTTTGCGCTCTCACACCCAGG                           <  SRR4302543.4467839/94‑1 (MQ=60)

                                                                     CACCGCCACGCTGGTTATGGGCGACGCCCTCGCTGTCGCGCTGTTAAAAGCACGCGGCTTTACTGCTGAAGATTTTGCGCTCTCACACCCAGGC                          >  SRR4302543.4816558/1‑94 (MQ=60)

                                                                       CCGCCACGCTGGTTATGGGCGACGCCCTCGCTGTCGCGCTGTTAAAAGCACGCGGCTTTACTGCTGAAGATTTTGCGCTCTCACACCCAGGCGG                        >  SRR4302543.6291557/1‑94 (MQ=60)

                                                                        CGCCACGCTGGTTATGGGCGACGCCCTCGCTGTCGCGCTGTTAAAAGCACGCGGCTTTACTGCTGAAGATTTTGCGCTCTCACACCCAGGCGGC                       <  SRR4302543.6210134/94‑1 (MQ=60)

                                                                         GCCACGCTGGTTATGGGCGACGCCCTCGCTGTCGCGCTGTTAAAAGCACGCGGCTTTACTGCTGAAGATTTTGCGCTCTCACACCCAGGCGGCG                      >  SRR4302543.7435680/1‑94 (MQ=60)

                                                                          CCACGCTGGTTATGGGCGACGCCCTCGCTGTCGCGCTGTTAAAAGCACGCGGCTTTACTGCTGAAGATTTTGCGCTCTCACACCCAGGCGGCGC                     >  SRR4302543.3886437/1‑94 (MQ=60)

                                                                           CACGCTGGTTATGGGCGACGCCCTCGCTGTCGCGCTGTTAAAAGCACGCGGCTTTACTGCTGAAGATTTTGCGCTCTCACACCCAGGCGGCGCA                    >  SRR4302543.7393547/1‑94 (MQ=60)

                                                                           CACGCTGGTTATGGGCGACGCCCTCGCTGTCGCGCTGTTAAAAGCACGCGGCTTTACTGCTGAAGATTTTGCGCTCTCACACCCAGGCGGCGCA                    >  SRR4302543.3582964/1‑94 (MQ=60)

                                                                            ACGCTGGTTATGGGCGACGCCCTCGCTGTCGCGCTGTTAAAAGCACGCGGCTTTACTGCCGAAGATTTTGCGCTCTCACACCCAGGCGGCGCAC                   <  SRR4302543.6627089/94‑1 (MQ=60)

                                                                            ACGCTGGGTATGGGCGACGCCCTCGCTGTCGCGCTGTTAAAAGCACGCGGCTTTACTGCTGAAGATTTTGCGCTCTCACACCCAGGCGGCGCAC                   <  SRR4302543.6627087/94‑1 (MQ=60)

                                                                             CGCTGGTTATGGGCGACGCCCTCGCTGTCGCGCTGTTAAAAGCACGCGGCTTTACTGCTGAAGATTTTGCGCTCTCACACCCAGGCGGCGCACT                  >  SRR4302543.7798989/1‑94 (MQ=60)

                                                                              GCTGGTTATGGGCGACGCCCTCGCTGTCGCGCTGTTAAAAGCACGCGGCTTTACTGCTGAAGATTTTGCGCTCTCACACCCAGGCGGCGCACTG                 <  SRR4302543.7903777/94‑1 (MQ=60)

                                                                               CTGGTTATGGGCGACGCCCTCGCTGTCGCGCTGTTAAAAGCACGCGGCTTTACTGCTGAAGATTTTGCGCTCTCACACCCAGGCGGCGCACTGG                >  SRR4302543.4630727/1‑94 (MQ=60)

                                                                               CTGGTTATGGGCGACGCCCTCGCTGTCGCGCTGTTAAAAGCACGCGGCTTTACTGCTGAAGATTTTGCGCTCTCACACCCAGGCGGCGCACTGG                <  SRR4302543.2039189/94‑1 (MQ=60)

                                                                               CTGGTTATGGGCGACGCCCTCGCTGTCGCGCTGTTAAAAGCACGCGGCTTTACTGCTGAAGATTTTGCGCTCTCACACCCAGGCGGCGCACTGG                <  SRR4302543.5542755/94‑1 (MQ=60)

                                                                               CTGGTTATGGGCGACGCCCTCGCTGTCGCGCTGTTAAAAGCACGCGGCTTTACTGCTGAAGATTTTGCGCTCTCACACCCAGGCGGCGCACTGG                >  SRR4302543.959556/1‑94 (MQ=60)

                                                                               CTGGTTATGGGCGACGCCCTCGCTGTCGCGCTGTTAAAAGCACGCGGCTTTACTGCTGAAGATTTTGCGCTCTCACACCCAGGCGGCGCACTGG                <  SRR4302543.3058103/94‑1 (MQ=60)

                                                                                TGGTTATGGGCGACGCCCTCGCTGTCGCGCTGTTAAAAGCACGCGGCTTTACTGCTGAAGATTTTGCGCTCTCACACCCAGGCGGCGCACTGGG               <  SRR4302543.565680/94‑1 (MQ=60)

                                                                                TGGTTATGGGCGACGCCCTCGCTGTCGCGCTGTTAAAAGCACGCGGCTTTACTGCTGAAGATTTTGCGCTCTCACACCCAGGCGGCGCACTGGG               >  SRR4302543.7295640/1‑94 (MQ=60)

                                                                                 GGTTATGGGCGACGCCCTCGCTGTCGCGCTGTTAAAAGCACGCGGCTTTACTGCTGAAGATTTTGCGCTCTCACACCCAGGCGGCGCACTGGGT              >  SRR4302543.7369149/1‑94 (MQ=60)

                                                                                  GTTATGGGCGACGCCCTCGCTGTCGCGCTGTTAAAAGCACGCGGCTTTACTGCTGAAGATTTTGCGCTCTCACACCCAGGCGGCGCACTGGGTC             >  SRR4302543.1805033/1‑94 (MQ=60)

                                                                                  GTTATGGGCGACGCCCTCGCTGTCGCGCTGTTAAAAGCACGCGGCTTTACTGCTGAAGATTTTGCGCTCTCACACCCAGGCGGCGCACTGGGTC             <  SRR4302543.3871331/94‑1 (MQ=60)

                                                                                  GTTATGGGCGACGCCCTCGCTGTCGCGCTGTTAAAAGCACGCGGCTTTACTGCTGAAGATTTTGCGCTCTCACACCCAGGCGGCGCACTGGGTC             >  SRR4302543.3228129/1‑94 (MQ=60)

                                                                                   TTATGGGCGACGCCCTCGCTGTCGCGCTGTTAAAAGCACGCGGCTTTACTGCTGAAGATTTTGCGCTCTCACACCCAGGCGGCGCACTGGGTCG            <  SRR4302543.6755036/94‑1 (MQ=60)

                                                                                    TATGGGCGACGCCCTCGCTGTCGCGCTGTTAAAAGCACGCGGCTTTACTGCTGAAGATTTTGCGCTCTCACACCCAGGCGGCGCACTGGGTCGT           <  SRR4302543.2422838/94‑1 (MQ=60)

                                                                                     ATGGGCGACGCCCTCGCTGTCGCGCTGTTAAAAGCACGCGGCTTTACTGCTGAAGATTTTGCGCTCTCACACCCAGGCGGCGCACTGGGTCGTA          >  SRR4302543.880361/1‑94 (MQ=60)

                                                                                     ATGGGCGACGCCCTCGCTGTCGCGCTGTTAAAAGCACGCGGCTTTACTGCTGAAGATTTTGCGCTCTCACACCCAGGCGGCGCACTGGGTCGTA          <  SRR4302543.968574/94‑1 (MQ=60)

                                                                                     ATGGGCGACGCCCTCGCTGTCGCGCTGTTAAAAGCACGCGGCTTTACTGCTGAAGATTTTGCGCTCTCACACCCAGGCGGCGCACTGGGTCGTA          <  SRR4302543.5160515/94‑1 (MQ=60)

                                                                                       GGGCGACGCCCTCGCTGTCGCGCTGTTAAAAGCACGCGGCTTTACTGCTGAAGATTTTGCGCTCTCACACCCAGGCGGCGCACTGGGTCGTAAA        <  SRR4302543.7045224/94‑1 (MQ=60)

                                                                                        GGCGACGCCCTCGCTGTCGCGCTGTTAAAAGCACGCGGCTTTACTGCTGAAGATTTTGCGCTCTCACACCCAGGCGGCGCACTGGGTCGTAAAC       <  SRR4302543.2861268/94‑1 (MQ=60)

                                                                                           GACGCCCTCGCTGTCGCGCTGTTAAAAGCACGCGGCTTTACTGCTGAAGATTTTGCGCTCTCACACCCAGGCGGCGCACTGGGTCGTAAACTTC    >  SRR4302543.1502861/1‑94 (MQ=60)

                                                                                           GACGCCCTCGCTGTCGCGCTGTTAAAAGCACGCGGCTTTACTGCTGAAGATTTTGCGCTCTCACACCCAGGCGGCGCACTGGGTCGTAAACTTC    <  SRR4302543.3300141/94‑1 (MQ=60)

                                                                                            ACGCCCTCGCTGTCGCGCTGTTAAAAGCACGCGGCTTTACTGCTGAAGATTTTGCGCTCTCACACCCAGGCGGCGCACTGGGTCGTAAACTTCT   <  SRR4302543.2554593/94‑1 (MQ=60)

                                                                                            ACGCCCTCGCTGTCGCGCTGTTAAAAGCACGCGGCTTTACTGCTGAAGATTTTGCGCTCTCACACCCAGGCGGCGCACTGGGTCGTAAACTTCT   <  SRR4302543.7901845/94‑1 (MQ=60)

                                                                                            ACGCCCTCGCTGTCGCGCTGTTAAAAGCACGCGGCTTTACTGCTGAAGATTTTGCGCTCTCACACCCAGGCGGCGCACTGGGTCGTAAACTTCT   <  SRR4302543.6548756/94‑1 (MQ=60)

                                                                                            ACGCCCTCGCTGTCGCGCTGTTAAAAGCACGCGGCTTTACTGCTGAAGATTTTGCGCTCTCACACCCAGGCGGCGCACTGGGTCGTAAACTTCT   >  SRR4302543.6132681/1‑94 (MQ=60)

                                                                                             CGCCCTCGCTGTCGCGCTGTTAAAAGCACGCGGCTTTACTGCTGAAGATTTTGCGCTCTCACACCCAGGCGGCGCACTGGGTCGTAAACTTCTG  <  SRR4302543.2949477/94‑1 (MQ=60)

                                                                                             CGCCCTCGCTGTCGCGCTGTTAAAAGCACGCGGCTTTACTGCTGAAGATTTTGCGCTCTCACACCCAGGCGGCGCACTGGGTCGTAAACTTCTG  <  SRR4302543.4371321/94‑1 (MQ=60)

AGATGTGCATCTGTGTGTTAAAGTAGCGAAAGAAGCCTGTCCGTTAGGGCTGGCACCGACCAGCAGCACCACCGCCACGCTGGTTATGGGCGATGCCCTCGCTGTCGCGCTGTTAAAAGCACGCGGCTTTACTGCTGAAGATTTTGCGCTCTCACACCCAGGCGGCGCACTGGGTCGTAAACTTCTG  >  NC_000913/3339329‑3339515

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 0 ≤` `ATCG/ATCG` `< 16 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`