Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A1 F1 I1 R1 1696 279.3 15874187 97.8% 15524954 93.0

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 3,339,701 C→T G265G (GGC→GGT)  yrbH → putative isomerase

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009133,339,7010CT99.0% 1312.7 / ‑2.6 397G265G (GGC→GGT) yrbHputative isomerase
Reads supporting (aligned to +/- strand):  ref base C (2/2);  new base T (218/173);  total (222/175)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 4.48e-01

Only 100 of 404 total aligned reads displayed.

AAATCTTGGTATGACTGTCATTTGCGATGACAATATGATGATTGAAGGCATCTTTACCGACGGTGATTTACGCCGTGTCTTCGATATGGGCGTGGATGTTCGTCAGTTAAGTATTGCCGATGTGATGACGCC‑GGGGGGAATACGTGTGCGCCCTGGCATTCTGGCCGTTGAGGCACTGAA  >  NC_000913/3339611‑3339790
                                                                                          |                                                                                          
aaaTCTTGGTATGACTGTCATTTGCGATGACAATATGATGATTGAAGGCATCTTTACCGACGGTGATTTACGCCGTGTCTTCGATATGGgtgt                                                                                          >  1:5144283/1‑93 (MQ=255)
 aaTCTTGGTATGACTGTCATTTGCGATGACAATATGATGATTGAAGGCATCTTTACCGACGGTGATTTACGCCGTGTCTTCGATATGGGtgtg                                                                                         >  1:532054/1‑93 (MQ=255)
   tCTTGGTATGACTGTCATTTGCGATGACAATATGATGATTGAAGGCATCTTTACCGACGGTGATTTACGCCGTGTCTTCGATATGGGTGTGGa                                                                                       >  1:4705804/1‑93 (MQ=255)
   tCTTGGTATGACTGTCATTTGCGATGACAATATGATGATTGAAGGCATCTTTACCGACGGTGATTTACGCCGTGTCTTCGATATGGGTGTGGa                                                                                       >  2:7132041/1‑93 (MQ=255)
     ttGGTATGACTGTCATTTGCGATGACAATATGATGATTGAAGGCATCTTTATCGACGGTTATTTACGCCGTGTCTTCTATATGGGTGTGGATg                                                                                     >  1:6997604/1‑93 (MQ=255)
     ttGGTATGACTGTCATTTGCGATGACAATATGATGATTGAAGGCATCTTTACCGACGGTGATTTACGCCGTGTCTTCGATATGGGTGTGGATg                                                                                     <  1:12582/93‑1 (MQ=255)
     ttGGTATGACTGTCATTTGCGATGACAATATGATGATTGAAGGCATCTTTACCGACGGTGATTTACGCCGTGTCTTCGATATGGGTGTGGATg                                                                                     >  2:1754256/1‑93 (MQ=255)
       tgTATGACTGTCATTTGCGATGACAATATGATGATTGAAGGCATCTTTACCGACGGTGATTTACGCCGTGTCTTCGATATGGGTGTGGATGtt                                                                                   <  1:310519/92‑1 (MQ=255)
       ggTATGACTGTCATTTGCGATGACAATATGATGATTGAAGGCATCTTTACCGACGGTGATTTACGCCGTGTCTTCGATATGGGTGTGGATGtt                                                                                   <  2:5927817/93‑1 (MQ=255)
       ggTATGACTGTCATTTGCGATGACAATATGATGATTGAAGGCATCTTTACCGACGGTGATTTACGCCGTGTCTTCGATATGGGTGTGGATGtt                                                                                   <  1:4763013/93‑1 (MQ=255)
       ggTATGACTGTCATTTGCGATGACAATATGATGATTGAAGGCATCTTTACCGACGGTGATTTACGCCGTGTCTTCGATATGGGTGTGGATGtt                                                                                   >  2:7146869/1‑93 (MQ=255)
         tATGACTGTCATTTGCGATGACAATATGATGATTGAAGGCATCTTTACCGACGGTGATTTACGCCGTGTCTTCGATATGGGTGTGGATGTTCg                                                                                 >  2:2354127/1‑93 (MQ=255)
           tGACTGTCATTTGCGATGACAATATGATGATTGAAGGCATCTTTACCGACGGTGATTTACGCCGTGTCTTCGATATGGGTGTGGATGTTCGTc                                                                               <  2:6782072/93‑1 (MQ=255)
             aCTGTCATTTGCGATGACAATATGATGATTGAAGGCATCTTTACCGACGGTGATTTACGCCGTGTCTTCGATATGGGTGTGGATGTTCGTCAg                                                                             >  1:287399/1‑93 (MQ=255)
               tGTCATTTGCGATGACAATATGATGATTGAAGGCATCTTTACCGACGGTGATTTACGCCGTGTCTTCGATATGGGTGTGGATGTTCGTCAGtt                                                                           >  1:6368238/1‑93 (MQ=255)
               tGTCATTTGCGATGACAATATGATGATTGAAGGCATCTTTACCGACGGTGATTTACGCCGTGTCTTCGATATGGGTGTGGATGTTCGTCAGtt                                                                           >  1:1563356/1‑93 (MQ=255)
               tGTCATTTGCGATGACAATATGATGATTGAAGGCATCTTTACCGACGGTGATTTACGCCGTGTCTTCGATATGGGTGTGGATGTTCGTCAGtt                                                                           >  2:858834/1‑93 (MQ=255)
                   aTTTGCGATGACAATATGATGATTGAAGGCATCTTTACCGACGGTGATTTACGCCGTGTCTTCGATATGGGTGTGGATGTTCGTCAGTTAAGt                                                                       <  1:3574869/93‑1 (MQ=255)
                    tttGCGATGACAATATGATGATTGAAGGCATCTTTACCGACGGTGATTTACGCCGTGTCTTCGATATGGGTGTGGATGTTCGTCAGTTAAGTa                                                                      >  1:1853128/1‑93 (MQ=255)
                    tttGCGATGACAATATGATGATTGAAGGCATCTTTACCGACGGTGATTTACGCCGTGTCTTCGATATGGGTGTGGATGTTCGTCAGTTAAGTa                                                                      >  2:1578067/1‑93 (MQ=255)
                      tGCGATGACAATATGATGATTGAAGGCATCTTTACCGACGGTGATTTACGCCGTGTCTTCGATATGGGTGTGGATGTTCGTCAGTTAAGTAtt                                                                    <  2:1340296/93‑1 (MQ=255)
                      tGCGATGACAATATGATGATTGAAGGCATCTTTACCGACGGTGATTTACGCCGTGTCTTCGATATGGGTGTGGATGTTCGTCAGTTAAGTAtt                                                                    <  1:7564501/93‑1 (MQ=255)
                        cGATGACAATATGATGATTGAAGGCATCTTTACCGACGGTGATTTACGCCGTGTCTTCGATATGGGTGTGGATGTTCGTCAGTTAAGTATTGc                                                                  >  2:2900169/1‑93 (MQ=255)
                        cGATGACAATATGATGATTGAAGGCATCTTTACCGACGGTGATTTACGCCGTGTCTTCGATATGGGTGTGGATGTTCGTCAGTTAAGTATTGc                                                                  >  2:5336116/1‑93 (MQ=255)
                        cGATGACAATATGATGATTGAAGGCATCTTTACCGACGGTGATTTACGCCGTGTCTTCGATATGGGTGTGGATGTTCGTCAGTTAAGTATTGc                                                                  <  2:3564397/93‑1 (MQ=255)
                         taTGACAATATGATAATTGAAGGCATCTTTCCCGACGGTGATTTACGCCGTGTCTTCGATATGGGTGTGGATGTTCGTCAGTTAAGTATTGcc                                                                 <  2:2847739/92‑1 (MQ=255)
                            gACAATATGATGATTGAAGGCATCTTTACCGACGGTGATTTACGCCGTGTCTTCGATATGGGTGTGGATGTTCGTCAGTTAAGTATTGCCGAt                                                              >  1:501026/1‑93 (MQ=255)
                            gACAATATGATGATTGAAGGCATCTTTACCGACGGTGATTTACGCCGTGTCTTCGATATGGGTGTGGATGTTCGTCAGTTAAGTATTGCCGAt                                                              <  1:3353930/93‑1 (MQ=255)
                            gACAATATGATGATTGAAGGCATCTTTACCGACGGTGATTTACGCCGTGTCTTCGATATGGGTGTGGATGTTCGTCAGTTAAGTATTGCCGAt                                                              <  1:2920504/93‑1 (MQ=255)
                               aaTATGATGATTGAAGGCATCTTTACCGACGGTGATTTACGCCGTGTCTTCGATATGGGTGTGGATGTTCGTCAGTTAAGTATTGCCGAtgtg                                                           >  2:5535023/1‑93 (MQ=255)
                               aaTATGATGATTGAAGGCATCTTTACCGACGGTGATTTACGCCGTGTCTTCGATATGGGTGTGGATGTTCGTCAGTTAAGTATTGCCGAtgtg                                                           >  1:631202/1‑93 (MQ=255)
                                atatGATGATTGAAGGCATCTTTACCGACGGTGATTTACGCCGTGTCTTCGATATGGGTGTGGATGTTCGTCAGTTAAGTATTGCCGATGtga                                                          <  1:1662648/93‑1 (MQ=255)
                                atatGATGATTGAAGGCATCTTTACCGACGGTGATTTACGCCGTGTCTTCGATATGGGTGTGGATGTTCGTCAGTTAAGTATTGCCGATGtga                                                          >  2:4649290/1‑93 (MQ=255)
                                atatGATGATTGAAGGCATCTTTACCGACGGTGATTTACGCCGTGTCTTCGATATGGGTGTGGATGTTCGTCAGTTAAGTATTGCCGATGtga                                                          <  2:3383153/93‑1 (MQ=255)
                                 tatGATGATTGAAGGCATCTTTACCGACGGTGATTTACGCCGTGTCTTCGATATGGGTGTGGATGTTCGTCAGTTAAGTATTGCCGATGtgat                                                         >  1:5626311/1‑93 (MQ=255)
                                   tgatgaTTGAAGGCATCTTTACCGACGGTGATTTACGCCGTGTCTTCGATATGGGTGTGGATGTTCGTCAGTTAAGTATTGCCGATGtgatga                                                       >  1:4267763/1‑93 (MQ=255)
                                   tgatgaTTGAAGGCATCTTTACCGACGGTGATTTACGCCGTGTCTTCGATATGGGTGTGGATGTTCGTCAGTTAAGTATTGCCGATGtgatga                                                       <  1:6600328/93‑1 (MQ=255)
                                   tgatgaTTGAAGGCATCTTTACCGACGGTGATTTACGCCGTGTCTTCGATATGGGTGTGGATGTTCGTCAGTTAAGTATTGCCGATGtgatga                                                       <  2:4807210/93‑1 (MQ=255)
                                   tgatgaTTGAAGGCATCTTTACCGACGGTGATTTACGCCGTGTCTTCGATATGGGTGTGGATGTTCGTCAGTTAAGTATTGCCGATGtgatga                                                       <  1:3411956/93‑1 (MQ=255)
                                   tgatgaTTGAAGGCATCTTTACCGACGGTGATTTACGCCGTGTCTTCGATATGGGTGTGGATGTTCGTCAGTTAAGTATTGCCGATGtgatga                                                       <  1:3920274/93‑1 (MQ=255)
                                    gatgatTGAAGGCATCTTTACCGACGGTGATTTACGCCGTGTCTTCGATATGGGTGTGGATGTTCGTCAGTTAAGTATTGCCGATGTGATGAc                                                      >  2:6510217/1‑93 (MQ=255)
                                    gatgatTGAAGGCATCTTTACCGACGGTGATTTACGCCGTGTCTTCGATATGGGTGTGGATGTTCGTCAGTTAAGTATTGCCGATGTGATGAc                                                      >  2:2079968/1‑93 (MQ=255)
                                      tgatTGAAGGCATCTTTACCGACGGTGATTTACGCCGTGTCTTCGATATGGGTGTGGATGTTCGTCAGTTAAGTATTGCCGATGTGATGACGc                                                    >  1:2555314/1‑93 (MQ=255)
                                      tgatTGAAGGCATCTTTACCGACGGTGATTTACGCCGTGTCTTCGATATGGGTGTGGATGTTCGTCAGTTAAGTATTGCCGATGTGATGACGc                                                    >  1:1171182/1‑93 (MQ=255)
                                        atTGAAGGCATCTTTACCGACGGTGATTTACGCCGTGTCTTCGATATGGGTGTGGATGTTCGTCAGTTAAGTATTGCCGATGTGATGACGCC‑g                                                 >  2:6412028/1‑93 (MQ=255)
                                         ttGAAGGCATCTTTACCGACGGTGATTTACGCCGTGTCTTCGATATGGGTGTGGATGTTCGTCAGTTAAGTATTGCCGATGTGATGACGCC‑gg                                                >  2:3159404/1‑93 (MQ=255)
                                         ttGAAGGCATCTTTACCGACGGTGATTTACGCCGTGTCTTCGATATGGGTGTGGATGTTCGTCAGTTAAGTATTGCCGATGTGATGACGCC‑gg                                                >  1:1360325/1‑93 (MQ=255)
                                          tGAAGGCATCTTTACCGACGGTGATTTACGCCGTGTCTTCGATATGGGTGTGGATGTTCGTCAGTTAAGTATTGCCGATGTGATGACGCC‑ggg                                               <  2:1942805/93‑1 (MQ=255)
                                           gAAGGCATCTTTACCGACGGTGATTTACGCCGTGTCTTCGATATGGGTGTGGATGTTCGTCAGTTAAGTATTGCCGATGTGATGACGCC‑gggg                                              <  2:7717800/93‑1 (MQ=255)
                                           gAAGGCATCTTTACCGACGGTGATTTACGCCGTGTCTTCGATATGGGTGTGGATGTTCGTCAGTTAAGTATTGCCGATGTGATGACGCC‑gggg                                              <  2:812572/93‑1 (MQ=255)
                                           gAAGGCATCTTTACCGACGGTGATTTACGCCGTGTCTTCGATATGGGTGTGGATGTTCGTCAGTTAAGTATTGCCGATGTGATGACGCC‑gggg                                              <  1:1085130/93‑1 (MQ=255)
                                           gAAGGCATCTTTACCGACGGTGATTTACGCCGTGTCTTCGATATGGGGGTGGATGTTCGTCAGTTAAGTATTGCCGATGTGATGACGCC‑gggg                                              >  1:4097987/1‑93 (MQ=255)
                                            aaGGCATCTTTACCGACGGTGATTTACGGCGTGTCTTCGATATGGGTGTGGATGTTCGTCAGTTAAGTATTGCCGATGTGATGACGCC‑ggggg                                             <  1:6064494/93‑1 (MQ=255)
                                            aaGGCATCTTTACCGACGGTGATTTACGCCGTGTCTTCGATATGGGTGTGGATGTTCGTCAGTTAAGTATTGCCGATGTGATGACGCC‑ggggg                                             >  1:956542/1‑93 (MQ=255)
                                             aGGCATCTTTACCGACGGTGATTTACGCCGTGTCTTCGATATGGGTGTGGATGTTCGTCAGTTAAGTATTGCCGATGTGATGGCGCC‑gggggg                                            >  2:6965949/1‑93 (MQ=255)
                                              ggCATCTTTACCGACGGTGATTTACGCCGTGTCTTCGATATGGGTGTGGATGTTCGTCAGTTAAGTATTGCCGATGTGATGACGCC‑GGGGGGa                                           >  2:7613758/1‑93 (MQ=255)
                                              ggCATCTTTA‑CGACGGTGATTTACGCCGTGTCTTCGATATGGGTGTGGATGTTCGTCAGTTAAGTATTGCCGATGTGATGACGCC‑GGGGGGaa                                          <  2:1302260/93‑1 (MQ=255)
                                              agCATCTTTACCGACGGTGATTTACGCCGTGTATTCGATATGGGTGTGGATGTTCGTCGGTTAAGTATTGCCGATGTGATGACGCC‑GGGGGGa                                           <  2:4029278/92‑1 (MQ=255)
                                               gCATCTTTACCGACGGGGATTTACGCCGTGTCTTCGATATGGGTGTGGATGTTCGTCAGTTAAGTATTGCCGATGTGATGACGCC‑GGGGGGaa                                          >  2:3932635/1‑93 (MQ=255)
                                                 aTCTTTACCGACGGTGATTTACGCCGTGTCTTCGATATGGGTGTGGATGTTCGTCAGTTAAGTATTGCCGATGTGATGACGCC‑GGGGGGAATa                                        >  1:6096500/1‑93 (MQ=255)
                                                 aTCTTTACCGACGGTGATTTACGCCGTGTCTTCGATATGGGTGTGGATGTTCGTCAGTTAAGTATTGCCGATGTGATGACGCC‑GGGGGGAATa                                        >  1:2721334/1‑93 (MQ=255)
                                                  tCTTTACCGACGGTGATTTACGCCGTGTCTTCGATATGGGTGTGGATGTTCGTCAGTTAAGTATTGCCGATGTGATGACGCC‑GGGGGGAATAc                                       >  2:5167178/1‑93 (MQ=255)
                                                  tCTTTACCGACGGTGATTTACGCCGTGTCTTCGATATGGGTGTGGATGTTCGTCAGTTAAGTATTGCCGATGTGATGACGCC‑GGGGGGAATAc                                       >  1:3593933/1‑93 (MQ=255)
                                                   cTTTACCGACGGTGATTTACGCCGTGTCTTCGATATGGGTGTGGATGTTCGTCAGTTAAGTATTGCCGATGTGATGACGCC‑GGGGGGAATACg                                      <  1:4595672/93‑1 (MQ=255)
                                                   cTTTACCGACGGTGATTTACGCCGTGTCTTCGATATGGGTGTGGATGTTCGTCAGTTAAGTATTGCCGATGTGATGACGCC‑GGGGGGAATACg                                      <  1:5537830/93‑1 (MQ=255)
                                                    tttACCGACGGTGATTTACGCCGTGTCTTCGATATGGGTGTGGATGTTCGTCAGTTAAGTATTGCCGATGTGATGACGCC‑GGGGGGGATACgg                                     >  2:6083808/1‑92 (MQ=255)
                                                     ttACCGACGGTGATTTACGCCGTGTCTTCGATATGGGTGTGGATGTTCGTCAGTTAAGTATTGCCGATGTGATGACGCC‑GGGGGGAATACgtg                                    <  2:4455268/93‑1 (MQ=255)
                                                       aCCGACGGTGATTTACGCCGTGTCTTCGATATGGGTGTGGATGTTCGTCAGTTAAGTATTGCCGATGTGATGACGCC‑GGGGGGAATACGtgtg                                  >  2:1060939/1‑93 (MQ=255)
                                                       aCCGACGGTAATTTACGCCGTGTCTTCGATATGGGTGTGGATGTTCGTCAGTTAAGTATTGCCGATGTGATGACGCC‑GGGGGGAATACGtgtg                                  >  1:6816923/1‑93 (MQ=255)
                                                        ccGACGGTGATTTACGCCGTGTCTTCGATATGGGTGTGGATGTTCGTCAGTTAAGTATTGCCGATGTGATGACGCCGGGGGGGAATACGggtg                                  >  2:3800262/1‑93 (MQ=255)
                                                          gACGGTGATTTACGCCGTGTCTTCGATATGGGTGTGGATGTTCGTCAGTTAAGTATTGCCGATGTGATGACGCC‑GGGGGGAATACGTGTgcgc                               <  2:6281688/93‑1 (MQ=255)
                                                          gACGGTGATTTACGCCGTGTCTTCGATATGGGTGTGGATGTTCGTCAGTTAAGTATTGCCGATGTGATGACGCC‑GGGGGGAATACGTGTgcgc                               <  1:5375559/93‑1 (MQ=255)
                                                           aCGGTGATTTACGCCGTGTCTTCGATATGGGTGTGGATGTTCGTCAGTTAAGTATTGCCGATGTGATGACGCC‑GGGGGGAATACGTGTGCGcc                              >  2:4241920/1‑93 (MQ=255)
                                                           aCGGTGATTTACGCCGTGTCTTCGATATGGGTGTGGATGTTCGTCAGTTAAGTATTGCCGATGTGATGACGCC‑GGGGGGAATACGTGTGCGcc                              >  1:7341638/1‑93 (MQ=255)
                                                           aCGGTGATTTACGCCGTGTCTTCGATATGGGTGGGGATGTTCGTCAGTTAAGTATTGCCGATGTGATGACGCC‑GGGGGGAATACGTGTGCGcc                              >  2:5674879/1‑93 (MQ=255)
                                                            cGGTGATTTACGCCGTGTCTTCGATATGGGTGTGGATGTTCGTCAGTTAAGTATTGCCGATGTGATGACGCC‑GGGGGGAATACGTGTGCGccc                             <  2:5011101/93‑1 (MQ=255)
                                                            cGGTGATTTACGCCGTGTCTTCGATATGGGTGTGGATGTTCGTCAGTTAAGTATTGCCGATGTGATGACGCC‑GGGGGGAATACGTGTGCGccc                             >  2:6703812/1‑93 (MQ=255)
                                                              gTGATTTACGCCGTGTCTTCGATATGGGTGTGGATGTTCGTCAGTTAAGTATTGCCGATGTGATGACGCC‑GGGGGGAATACGTGTGCGCCCTg                           <  1:7932796/93‑1 (MQ=255)
                                                              gTGATTTACGCCGTGTCTTCGATATGGGTGTGGATGTTCGTCAGTTAAGTATTGCCGATGTGATGACGCC‑GGGGGGAATACGTGTGCGCCCTg                           >  1:4439078/1‑93 (MQ=255)
                                                                 aTTTACGCCGTGTCTTCGATATGGGTGTGGATGTTCGTCAGTTAAGTATTGCCGATGTGATGACGCC‑GGGGGGAATACGTGTGCGCCCTGGCa                        <  2:2817191/93‑1 (MQ=255)
                                                                 aTTTACGCCGTGTCTTCGATATGGGTGTGGATGTTCGTCAGTTAAGTATTGCCGATGTGATGACGCC‑GGGGGGAATACGTGTGCGCCCTGGCa                        <  2:2206242/93‑1 (MQ=255)
                                                                    tACGCCGTGTCTTCGATATGGGTGTGGATGTTCGTCAGTTAAGTATTGCCGATGTGATGACGCC‑GGGGGGAATACGTGTGCGCCCTGGCATTc                     >  2:3078333/1‑93 (MQ=255)
                                                                    tACGCCGTGTCTTCGATATGGGTGTGGATGTTCGTCAGTTAAGTATTGCCGATGTGATGACGCC‑GGGGGGAATACGTGTGCGCCCTGGCATTc                     <  2:2064003/93‑1 (MQ=255)
                                                                     aCGCCGTGTCTTCGATATGGGTGTGGATGTTCGTCAGTTAAGTATTGCCGATGTGATGACGCC‑GGGGGGAATACGTGTGCGCCCTGGCATTCt                    <  1:7153332/93‑1 (MQ=255)
                                                                      cGCCGTGTCTGCGATATGGGTGTGGATGTTCGTCAGTTAAGTATTGCCGATGTGATGACGCC‑GGGGGGAATACGTGTGCGCCCTGGCATTCTg                   <  2:3255757/93‑1 (MQ=255)
                                                                       gCCGTGTCTTCGATATGGGTGTGGATGTTCGTCAGTTAAGTATTGCCGATGTGATGACGCC‑GGGGGGAATACGTGTGCGCCCTGGCATTCTgg                  <  2:7298740/93‑1 (MQ=255)
                                                                        ccGTGTCTTCGATATGGGCGTGGATGTTCGTCAGTTAAGTATTGCCGATGTGATGACGCC‑GGGGGGCATACGTGTGCGCCCTGGCATTCTGGc                 >  1:3780696/1‑93 (MQ=255)
                                                                            gtCTTCGATATGGGTGTGGATGTTCGTCAGTTAAGTATTGCCGATGTGATGACGCC‑GGGGGGAATACGTGTGCGCCCTGGCATTCTGGCCGtt             <  2:1673342/93‑1 (MQ=255)
                                                                              cTTCGATATGGGTGTGGATGTTCGTCAGTTAAGTATTGCCGATGTGATGACGCC‑GGGGGGAATACGTGTGCGCCCTGGCATTCTGGCCGTTGa           >  2:1880950/1‑93 (MQ=255)
                                                                              cTTCGATATGGGTGTGGATGTTCGTCAGTTAAGTATTGCCGATGTGATGACGCC‑GGGGGGAATACGTGTGCGCCCTGGCATTCTGGCCGTTGa           <  2:523150/93‑1 (MQ=255)
                                                                               ttCGATATGGGTGTGGATGTTCGTCAGTTAAGTATTGCCGATGTGATGACGCC‑GGGGGGAATACGTGTGCGCCCTGGCATTCTGGCCGTTGAg          >  1:2127126/1‑93 (MQ=255)
                                                                               ttCGATATGGGTGTGGATGTTCGTCAGTTAAGTATTGCCGATGTGATGACGCC‑GGGGGGAATACGTGTGCGCCCTGGCATTCTGGCCGTTGAg          >  1:1938807/1‑93 (MQ=255)
                                                                               ttCGATATGGGTGTGGATGTTCGTCAGTTAAGTATTGCCGATGTGATGACGCC‑GGGGGGAATACGTGTGCGCCCTGGCATTCTGGCCGTTGAg          <  1:6176151/93‑1 (MQ=255)
                                                                               ttCGATATGGGTGTGGATGTTCGTCAGTTAAGTATTGCCGATGTGATGACGCC‑GGGGGGAATACGTGTGCGCCCTGGCATTCTGGCCGTTGAg          <  1:7814203/93‑1 (MQ=255)
                                                                                  gATATGGGTGTGGATGTTCGTCAGTTAAGTATTGCCGATGTGATGACGCC‑GGGGGGAATACGTGTGCGCCCTGGCATTCTGGCCGTTGAGGCa       >  2:5081687/1‑93 (MQ=255)
                                                                                   atatGGGTGTGGATGTTCGTCAGTTAAGTATTGCCGATGTGATGACGCC‑GGGGGGAATACGTGTGCGCCCTGGCATTCTGGCCGTTGAGGCAc      >  1:4846302/1‑93 (MQ=255)
                                                                                    tatGGGTGTGGATGTTCGTCAGTTAAGTATTGCCGATGTGATGACGCC‑GGGGGGAATACGTGTGCGCCCTGGCATTCTGGCCGTTGAGGCACt     >  2:2498412/1‑93 (MQ=255)
                                                                                     atGGGTGTGGATGTTCGTCAGTTAAGTATTGCCGATGTGATGAAGCC‑GGGGGGAATAGGTGTGCGCCCTGGCATTCTGGCCGTTGAGGCAGTg    >  1:2269023/1‑93 (MQ=255)
                                                                                      tGGGTGTGGATGTTCGTCAGTTAAGTATTGCCGATGTGATGACGCC‑GGGGGGAATACGTGTGCGCCCTGGCATTCTGGCCGTTGAGGCACTGa   >  2:7522640/1‑93 (MQ=255)
                                                                                      tGGGTGTGGATGTTCGTCAGTTAAGTATTGCCGATGTGATGACGCC‑GGGGGGAATACGTGTGCGCCCTGGCATTCTGGCCGTTGAGGCACTGa   >  1:1004463/1‑93 (MQ=255)
                                                                                          |                                                                                          
AAATCTTGGTATGACTGTCATTTGCGATGACAATATGATGATTGAAGGCATCTTTACCGACGGTGATTTACGCCGTGTCTTCGATATGGGCGTGGATGTTCGTCAGTTAAGTATTGCCGATGTGATGACGCC‑GGGGGGAATACGTGTGCGCCCTGGCATTCTGGCCGTTGAGGCACTGAA  >  NC_000913/3339611‑3339790

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 28 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

BRESEQ :: bam2aln output Only 200 of 202 total aligned reads displayed.
AAAAATCTTGGTATGACTGTCATTTGCGATGACAATATGATGATTGAAGGCATCTTTACCGACGGTGATTTACGCCGTGTCTTCGATATGGGCGTGGATGTTCGTCAGTTAAGTATTGCCGATGTGATGACGCCGGGGGGAATACGTGTGCGCCCTGGCATTCTGGCCGTTGAGGCACTGAACTT  >  NC_000913/3339609‑3339793
                                                                                            |                                                                                            
AAAAATCTTGGTATGACTGTCATTTGCGATGACAATATGATGATTGAAGGCATCTTTACCGACGGTGATTTACGCCGTGTCTTCGATATGGGTG                                                                                             >  SRR4302543.2929072/1‑94 (MQ=60)
AAAAATCTTGGTATGACTGTCATTTGCGATGACAATATGATGATTGAAGGCATCTTTACCGACGGTGATTTACGCCGTGTCTTCGATATGGGTG                                                                                             <  SRR4302543.1903601/94‑1 (MQ=60)
 AAAATCTTGGTATGACTGTCATTTGCGATGACAATATGATGATTGAAGGCATCTTTACCGACGGTGATTTACGCCGTGTCTTCGATATGGGTGT                                                                                            >  SRR4302543.5190792/1‑94 (MQ=60)
  AAATCTTGGTATGACTGTCATTTGCGATGACAATATGATGATTGAAGGCATCTTTACCGACGGTGATTTACGCCGTGTCTTCGATATGGGTGTG                                                                                           >  SRR4302543.536984/1‑94 (MQ=60)
  AAATCTTGGTATGACTGTCATTTGCGATGACAATATGATGATTGAAGGCATCTTTACCGACGGTGATTTACGCCGTGTCTTCGATATGGGTGTG                                                                                           <  SRR4302543.1310211/94‑1 (MQ=60)
   AATCTTGGTATGACTGTCATTTGCGATGACAATATGATGATTGAAGGCATCTTTACCGACGGTGATTTACGCCGTGTCTTCGATATGGGTGTGG                                                                                          >  SRR4302543.5375512/1‑94 (MQ=60)
    ATCTTGGTATGACTGTCATTTGCGATGACAATATGATGATTGAAGGCATCTTTACCGACGGTGATTTACGCCGTGTCTTCGATATGGGTGTGGA                                                                                         >  SRR4302543.4748799/1‑94 (MQ=60)
    ATCTTGGTATGACTGTCATTTGCGATGACAATATGATGATTGAAGGCATCTTTACCGACGGTGATTTACGCCGTGTCTTCGATATGGGTGTGGA                                                                                         >  SRR4302543.7081518/1‑94 (MQ=60)
     TCTTGGTATGACTGTCATTTGCGATGACAATATGATGATTGAAGGCATCTTTACCGACGGTGATTTACGCCGTGTCTTCGATATGGGTGTGGAT                                                                                        <  SRR4302543.2948838/94‑1 (MQ=60)
      CTTGGTATGACTGTCATTTGCGATGACAATATGATGATTGAAGGCATCTTTATCGACGGTTATTTACGCCGTGTCTTCTATATGGGTGTGGATG                                                                                       >  SRR4302543.7063724/1‑94 (MQ=60)
      CTTGGTATGACTGTCATTTGCGATGACAATATGATGATTGAAGGCATCTTTACCGACGGTGATTTACGCCGTGTCTTCGATATGGGTGTGGATG                                                                                       >  SRR4302543.7192883/1‑94 (MQ=60)
      CTTGGTATGACTGTCATTTGCGATGACAATATGATGATTGAAGGCATCTTTACCGACGGTGATTTACGCCGTGTCTTCGATATGGGTGTGGATG                                                                                       >  SRR4302543.6064122/1‑94 (MQ=60)
      CTTGGTATGACTGTCATTTGCGATGACAATATGATGATTGAAGGCATCTTTACCGACGGTGATTTACGCCGTGTCTTCGATATGGGTGTGGATG                                                                                       >  SRR4302543.6852229/1‑94 (MQ=60)
       TTGGTATGACTGTCATTTGCGATGACAATATGATGATTGAAGGCATCTTTACCGACGGTGATTTACGCCGTGTCTTCGATATGGGTGTGGATGT                                                                                      <  SRR4302543.12690/94‑1 (MQ=60)
       TTGGTATGACTGTCATTTGCGATGACAATATGATGATTGAAGGCATCTTTACCGACGGTGATTTACGCCGTGTCTTCGATATGGGTGTGGATGT                                                                                      <  SRR4302543.1583435/94‑1 (MQ=60)
       TTGGTATGACTGTCATTTGCGATGACAATATGATGATTGAAGGCATCTTTACCGACGGTGATTTACGCCGTGTCTTCGATATGGGTGTGGATGT                                                                                      <  SRR4302543.642205/94‑1 (MQ=60)
         TGTATGACTGTCATTTGCGATGACAATATGATGATTGAAGGCATCTTTACCGACGGTGATTTACGCCGTGTCTTCGATATGGGTGTGGATGTTC                                                                                    <  SRR4302543.313316/94‑1 (MQ=60)
         GGTATGACTGTCATTTGCGATGACAATATGATGATTGAAGGCATCTTTACCGACGGTGATTTACGCCGTGTCTTCGATATGGGTGTGGATGTTC                                                                                    <  SRR4302543.3145730/94‑1 (MQ=60)
         GGTATGACTGTCATTTGCGATGACAATATGATGATTGAAGGCATCTTTACCGACGGTGATTTACGCCGTGTCTTCGATATGGGTGTGGATGTTC                                                                                    <  SRR4302543.4806536/94‑1 (MQ=60)
          GTATGACTGTCATTTGCGATGACAATATGATGATTGAAGGCATCTTTACCGACGGTGATTTACGCCGTGTCTTCGATATGGGTGTGGATGTTCG                                                                                   >  SRR4302543.339046/1‑94 (MQ=60)
           TATGACTGTCATTTGCGATGACAATATGATGATTGAAGGCATCTTTACCGACGGTGATTTACGCCGTGTCTTCGATATGGGTGTGGATGTTCGT                                                                                  <  SRR4302543.4214808/94‑1 (MQ=60)
           TATGACTGTCATTTGCGATGACAATATGATGATTGAAGGCATCTTTACCGACGGTGATTTACGCCGTGTCTTCGATATGGGTGTGGATGTTCGT                                                                                  >  SRR4302543.6223917/1‑94 (MQ=60)
           TATGACTGTCATTTGCGATGACAATATGATGATTGAAGGCATCTTTACCGACGGTGATTTACGCCGTGTCTTCGATATGGGTGTGGATGTTCGT                                                                                  >  SRR4302543.6223918/1‑94 (MQ=60)
           TATGACTGTCATTTGCGATGACAATATGATGATTGAAGGCATCTTTACCGACGGTGATTTACGCCGTGTCTTCGATATGGGTGTGGATGTTCGT                                                                                  <  SRR4302543.1906535/94‑1 (MQ=60)
           TATGACTGTCATTTGCGATGACAATATGATGATTGAAGGCATCTTTACCGACGGTGATTTACGCCGTGTCTTCGATATGGGTGTGGATGTTCGT                                                                                  <  SRR4302543.7371785/94‑1 (MQ=60)
            ATGACTGTCATTTGCGATGACAATATGATGATTGAAGGCATCTTTACCGACGGTGATTTACGCCGTGTCTTCGATATGGGTGTGGATGTTCGTC                                                                                 >  SRR4302543.4590607/1‑94 (MQ=60)
            ATGACTGTCATTTGCGATGACAATATGATGATTGAAGGCATCTTTACCGACGGTGATTTACGCCGTGTCTTCGATATGGGTGTGGATGTTCGTC                                                                                 >  SRR4302543.3921164/1‑94 (MQ=60)
            ATGACTGTCATTTGCGATGACAATATGATGATTGAAGGCATCTTTACCGACGGTGATTTACGCCGTGTCTTCGATATGGGTGTGGATGTTCGTC                                                                                 <  SRR4302543.2799553/94‑1 (MQ=60)
              GACTGTCATTTGCGATGACAATATGATGATTGAAGGCATCTTTACCGACGGTGATTTACGCCGTGTCTTCGATATGGGTGTGGATGTTCGTCAG                                                                               <  SRR4302543.4665948/94‑1 (MQ=60)
              GACTGTCATTTGCGATGACAATATGATGATTGAAGGCATCTTTACCGACGGTGATTTACGCCGTGTCTTCGATATGGGTGTGGATGTTCGTCAG                                                                               >  SRR4302543.289962/1‑94 (MQ=60)
               ACTGTCATTTGCGATGACAATATGATGATTGAAGGCATCTTTACCGACGGTGATTTACGCCGTGTCTTCGATATGGGTGTGGATGTTCGTCAGT                                                                              >  SRR4302543.5384782/1‑94 (MQ=60)
               ACTGTCATTTGCGATGACAATATGATGATTGAAGGCATCTTTACCGACGGTGATTTACGCCGTGTCTTCGATATGGGTGTGGATGTTCGTCAGT                                                                              >  SRR4302543.3707909/1‑94 (MQ=60)
               ACTGTCATTTGCGATGACAATATGATGATTGAAGGCATCTTTACCGACGGTGATTTACGCCGTGTCTTCGATATGGGTGTGGATGTTCGTCAGT                                                                              <  SRR4302543.7722535/94‑1 (MQ=60)
                CTGTCATTTGCGATGACAATATGATGATTGAAGGCATCTTTACCGACGGTGATTTACGCCGTGTCTTCGATATGGGTGTGGATGTTCGTCAGTT                                                                             >  SRR4302543.6428132/1‑94 (MQ=60)
                CTGTCATTTGCGATGACAATATGATGATTGAAGGCATCTTTACCGACGGTGATTTACGCCGTGTCTTCGATATGGGTGTGGATGTTCGTCAGTT                                                                             >  SRR4302543.1577318/1‑94 (MQ=60)
                CTGTCATTTGCGATGACAATATGATGATTGAAGGCATCTTTACCGACGGTGATTTACGCCGTGTCTTCGATATGGGTGTGGATGTTCGTCAGTT                                                                             >  SRR4302543.7538304/1‑94 (MQ=60)
                 TGTCATTTGCGATGACAATATGATGATTGAAGGCATCTTTACCGACGGTGATTTACGCCGTGTCTTCGATATGGGTGTGGATGTTCGTCAGTTA                                                                            >  SRR4302543.346707/1‑94 (MQ=60)
                 TGTCATTTGCGATGACAATATGATGATTGAAGGCATCTTTACCGACGGTGATTTACGCCGTGTCTTCGATATGGGTGTGGATGTTCGTCAGTTA                                                                            >  SRR4302543.3991321/1‑94 (MQ=60)
                  GTCATTTGCGATGACAATATGATGATTGAAGGCATCTTTACCGACGGTGATTTACGCCGTGTCTTCGATATGGGTGTGGATGTTCGTCAGTTAA                                                                           >  SRR4302543.3489874/1‑94 (MQ=60)
                   TCATTTGGGATGACAATATGGTGATTGAAGGCATCTTTACCGACGGTGATTTACGCCGTGTCTTCGATATGGGTGTGGATGTTCGTCAGTTAAG                                                                          <  SRR4302543.4603607/94‑1 (MQ=60)
                   TCATTTGCGATGACAATATGATGATTGAAGGCATCTTTACCGACGGTGATTTACGCCGTGTCTTCGATATGGGTGTTGATGTTCGTCAGTTAAG                                                                          <  SRR4302543.6161027/94‑1 (MQ=60)
                   TCATTTGCGATGACAATATGATGATTGAAGGCATCTTTACCGACGGTGATTTACGCCGTGTCTTCGATATGGGTGTGGATGTTCGTCAGTTAAG                                                                          <  SRR4302543.2808142/94‑1 (MQ=60)
                   TCATTTGCGATGACAATATGATGATTGAAGGCATCTTTACCGACGGTGATTTACGCCGTGTCTTCGATATGGGTGTGGATGTTCGTCAGTTAAG                                                                          >  SRR4302543.3612770/1‑94 (MQ=60)
                   TCATTTGCGATGACAATATGATGATTGAAGGCATCTTTACCGACGGTGATTTACGCCGTGTCTTCGATATGGGTGTGGATGTTCGTCAGTTAAG                                                                          <  SRR4302543.4260277/94‑1 (MQ=60)
                    CATTTGCGATGACAATATGATGATTGAAGGCATCTTTACCGACGGTGATTTACGCCGTGTCTTCGATATGGGTGTGGATGTTCGTCAGTTAAGT                                                                         >  SRR4302543.6349691/1‑94 (MQ=60)
                    CATTTGCGATGACAATATGATGATTGAAGGCATCTTTACCGACGGTGATTTACGCCGTGTCTTCGATATGGGTGTGGATGTTCGTCAGTTAAGT                                                                         >  SRR4302543.1618729/1‑94 (MQ=60)
                     ATTTGCGATGACAATATGATGATTGAAGGCATCTTTACCGACGGTGATTTACGCCGTGTCTTCGATATGGGTGTGGATGTTCGTCAGTTAAGTA                                                                        <  SRR4302543.3606464/94‑1 (MQ=60)
                     ATTTGCGATGACAATATGATGATTGAAGGCATCTTTACCGACGGTGATTTACGCCGTGTCTTCGATATGGGTGTGGATGTTCGTCAGTTAAGTA                                                                        >  SRR4302543.5241309/1‑94 (MQ=60)
                     ATTTGCGATGACAATATGATGATTGAAGGCATCTTTACCGACGGTGATTTACGCCGTGTCTTCGATATGGGTGTGGATGTTCGTCAGTTAAGTA                                                                        <  SRR4302543.1325934/94‑1 (MQ=60)
                     ATTTGCGATGACAATATGATGATTGAAGGCATCTTTACCGACGGTGATTTACGCCGTGTCTTCGATATGGGTGTGGATGTTCGTCAGTTAAGTA                                                                        >  SRR4302543.4691581/1‑94 (MQ=60)
                     ATTTGCGATGACAATATGATGATTGAAGGCATCTTTACCGACGGTGATTTACGCCGTGTCTTCGATATGGGTGTGGATGTTCGTCAGTTAAGTA                                                                        >  SRR4302543.1869790/1‑94 (MQ=60)
                     ATTTGCGATGACAATATGATGATTGAAGGCATCTTTACCGACGGTGATTTACGCCGTGTCTTCGATATGGGAGTGGATGTTCGTCAGTTAAGTA                                                                        >  SRR4302543.1289483/1‑94 (MQ=60)
                     ATTTGCGATGACAATATGATGATTGAAGGCATCTTTACCGACGGCGATTTACGCCGTGTCTTCGATATGGGTGTGGATGTTCGTCAGTTAA‑TAT                                                                       >  SRR4302543.6871251/1‑94 (MQ=60)
                      TTTGCGATGACAATATGATGATTGAAGGCATCTTTACCGACGGTGATTTACGCCGTGTCTTCGATATGGGTGTGGATGTTCGTCAGTTAAGTAT                                                                       <  SRR4302543.5519551/94‑1 (MQ=60)
                      TTTGCGATGACAATATGATGATTGAAGGCATCTTTACCGACGGTGATTTACGCCGTGTCTTCGATATGGGTGTGGATGTTCGTCAGTTAAGTAT                                                                       <  SRR4302543.182530/94‑1 (MQ=60)
                      TTTGCGATGACAATATGATGATTGAAGGCATCTTTACCGACGGTGATTTACGCCGTGTCTTCGATATGGGTGTGGATGTTCGTCAGTTAAGTAT                                                                       >  SRR4302543.3915227/1‑94 (MQ=60)
                       TTGCGATGACAATATGATGATTGAAGGCATCTTTACCGACGGTGATTTACGCCGTGTCTTCGATATGGGTGTGGATGTTCGTCAGTTAAGTATT                                                                      <  SRR4302543.6489176/94‑1 (MQ=60)
                        TGCGATGACAATATGATGATTGAAGGCATCTTTACCGACGGTGATTTACGCCGTGTCTTCGATATGGGTGTGGATGTTCGTCAGTTAAGTATTG                                                                     <  SRR4302543.443169/94‑1 (MQ=60)
                        TGCGATGACAATATGATGATTGAAGGCATCTTTACCGACGGTGATTTACGCCGTGTCTTCGATATGGGTGTGGATGTTCGTCAGTTAAGTATTG                                                                     <  SRR4302543.7636492/94‑1 (MQ=60)
                          CGATGACGATATGATGATTGAAGGCATCTTTACCGACGGTGATTTACGCCGTGTCTTCGATATGAGCGTGGATGTTGGTCAGTTAAGTATTGCC                                                                   >  SRR4302543.1235200/1‑94 (MQ=60)
                          CGATGACAATATGATGATTGAAGGCATCTTTACCGACGGTGATTTACGCCGTGTCTTCGATATGGGTGTGGATGTTCGTCAGTTAAGTATTGCC                                                                   <  SRR4302543.2916007/94‑1 (MQ=60)
                          CGATGACAATATGATGATTGAAGGCATCTTTACCGACGGTGATTTACGCCGTGTCTTCGATATGGGTGTGGATGTTCGTCAGTTAAGTATTGCC                                                                   >  SRR4302543.6152125/1‑94 (MQ=60)
                          CGATGACAATATGATGATTGAAGGCATCTTTACCGACGGTGATTTACGCCGTGTCTTCGATATGGGTGTGGATGTTCGTCAGTTAAGTATTGCC                                                                   >  SRR4302543.2179847/1‑94 (MQ=60)
                          CGATGACAATATGATGATTGAAGGCATCTTTACCGACGGTGATTTACGCCGTGTCTTCGATATGGGTGTGGATGTTCATCAGTTAAGTATTGCG                                                                   >  SRR4302543.613099/1‑94 (MQ=60)
                           GATGACAATATGATGATTGAAGGCATCTTTACCGACGGTGATTTACGCCGTGTCTTCGATATGGGTGTGGATGTTCGTCAGTTAAGTATTGCCG                                                                  >  SRR4302543.6627856/1‑94 (MQ=60)
                           GATGACAATATGATGATTGAAGGCATCTTTACCGACGGTGATTTACGCCGTGTCTTCGATATGGGTGTGGATGTTCGTCAGTTAAGTATTGCCG                                                                  >  SRR4302543.4820533/1‑94 (MQ=60)
                           GATGACAATATGATGATTGAAGGCATCTTTACCGACGGTGATTTACGCCGTGTCTTCGATATGGGTGTGGATGTTCGTCAGTTAAGTATTGCCG                                                                  <  SRR4302543.7699913/94‑1 (MQ=60)
                           GATGACAATATGATGATTGAAGGCATCTTTACCGACGGTGATTTACGCCGTGTCTTCGATATGGGTGTGGATGTTCGTCAGTTAAGTATTGCCG                                                                  <  SRR4302543.2283966/94‑1 (MQ=60)
                             TGACAATATGATGATTGAAGGCATCTTTACCGACGGTGATTTACGCCGTGTCTTCGATATGGGTGTGGATGTTCGTCAGTTAAGTATTGCCGAT                                                                >  SRR4302543.505666/1‑94 (MQ=60)
                              GACAATATGATGATTGAAGGCATCTTTACCGACGGTGATTTACGCCGTGTCTTCGATATGGGTGTGGATGTTCGTCAGTTAAGTATTGCCGATG                                                               <  SRR4302543.3384118/94‑1 (MQ=60)
                              GACAATATGATGATTGAAGGCATCTTTACCGACGGTGATTTACGCCGTGTCTTCGATATGGGTGTGGATGTTCGTCAGTTAAGTATTGCCGATG                                                               <  SRR4302543.1504996/94‑1 (MQ=60)
                              GACAATATGATGATTGAAGGCATCTTTACCGACGGTGATTTACGCCGTGTCTTCGATATGGGTGTGGATGTTCGTCAGTTAAGTATTGCCGATG                                                               <  SRR4302543.290008/94‑1 (MQ=60)
                              GACAATATGATGATTGAAGGCATCTTTACCGACGGTGATTTACGCCGTGTCTTCGATATGGGTGTGGATGTTCGTCAGTTAAGTATTGCCGATG                                                               <  SRR4302543.2947039/94‑1 (MQ=60)
                               ACAATATGATGATTGAAGGCATCTTTACCGACGGTGATTTACGCCGTGTCTTCGATATGGGTGTGGATGTTCGTCAGTTAAGTATTGCCGATGT                                                              <  SRR4302543.4937959/94‑1 (MQ=60)
                                CAATATGATGATTGAAGGCATCTTTACCGACGGTGATTTACGCCGTGTCTTCGATATGGGTGTGGATGTTCGTCAGTTAAGTATTGCCGATGTG                                                             >  SRR4302543.636973/1‑94 (MQ=60)
                                  ATATGATGATTGAAGGCATCTTTACCGACGGTGATTTACGCCGTGTCTTCGATATGGGTGTGGATGTTCGTCAGTTAAGTATTGCCGATGTGAT                                                           <  SRR4302543.1677541/94‑1 (MQ=60)
                                  ATATGATGATTGAAGGCATCTTTACCGACGGTGATTTACGCCGTGTCTTCGATATGGGTGTGGATGTTCGTCAGTTAAGTATTGCCGATGTGAT                                                           >  SRR4302543.5677584/1‑94 (MQ=60)
                                   TATGATGATTGAAGGCATCTTTACCGACGGTGATTTACGCCGTGTCTTCGATATGGGTGTGGATGTTCGTCAGTTAAGTATTGCCGATGTGATG                                                          <  SRR4302543.3442284/94‑1 (MQ=60)
                                   TATGATGATTGAAGGCATCTTTACCGACGGTGATTTACGCCGTGTCTTCGATATGGGTGTGGATGTTCGTCAGTTAAGTATTGCCGATGTGATG                                                          >  SRR4302543.7612071/1‑94 (MQ=60)
                                    ATGATGATTGAAGGCATCTTTACCGACGGTGATTTACGCCGTGTCTTCGATATGGGTGTGGATGTTCGTCAGTTAAGTATTGCCGATGTGATGA                                                         >  SRR4302543.4306535/1‑94 (MQ=60)
                                    ATGATGATTGAAGGCATCTTTACCGACGGTGATTTACGCCGTGTCTTCGATATGGGTGTGGATGTTCGTCAGTTAAGTATTGCCGATGTGATGA                                                         <  SRR4302543.1101761/94‑1 (MQ=60)
                                    ATGATGATTGAAGGCATCTTTACCGACGGTGATTTACGCCGTGTCTTCGATATGGGTGTGGATGTTCGTCAGTTAAGTATTGCCGATGTGATGA                                                         >  SRR4302543.4761829/1‑94 (MQ=60)
                                    ATGATGATTGAAGGCATCTCTACCGACGGCGATTTACGCCGTGACTAAGATATGGGGGGGGATGTTCCTCAGTTccgttttgccgctgtgatgc                                                         >  SRR4302543.4761828/1‑74 (MQ=28)
                                     TGATGATTGAAGGCATCTTTACCGACGGTGATTTACGCCGTGTCTTCGATATGGGTGTGGATGTTCGTCAGTTAAGTATTGCCGATGTGATGAC                                                        >  SRR4302543.5590006/1‑94 (MQ=60)
                                     TGATGATTGAAGGCATCTTTACCGACGGTGATTTACGCCGTGTCTTCGATATGGGTGTGGATGTTCGTCAGTTAAGTATTGCCGATGTGATGAC                                                        <  SRR4302543.3442500/94‑1 (MQ=60)
                                     TGATGATTGAAGGCATCTTTACCGACGGTGATTTACGCCGTGTCTTCGATATGGGTGTGGATGTTCGTCAGTTAAGTATTGCCGATGTGATGAC                                                        <  SRR4302543.3954871/94‑1 (MQ=60)
                                     TGATGATTGAAGGCATCTTTACCGACGGTGATTTACGCCGTGTCTTCGATATGGGTGTGGATGTTCGTCAGTTAAGTATTGCCGATGTGATGAC                                                        <  SRR4302543.6662523/94‑1 (MQ=60)
                                     TGATGATTGAAGGCATCTTTACCGACGGTGATTTACGCCGTGTCTTCGATATGGGTGTGGATGTTCGTCAGTTAAGTATTGCCGATGTGATGAC                                                        >  SRR4302543.4872445/1‑94 (MQ=60)
                                      GATGATTGAAGGCATCTTTACCGACGGTGATTTACGCCGTGTCTTCGATATGGGTGTGGATGTTCGTCAGTTAAGTATTGCCGATGTGATGACG                                                       <  SRR4302543.829645/94‑1 (MQ=60)
                                      GATGATTGAAGGCATCTTTACCGACGGTGATTTACGCCGTGTCTTCGATATGGGTGTGGATGTTCGTCAGTTAAGTATTGCCGATGTGATGACG                                                       <  SRR4302543.7169525/94‑1 (MQ=60)
                                       ATGATTGAAGGCATCTTTACCGACGGTGATTTACGCCGTGTCTTCGATATGGGTGTGGATGTTCGTCAGTTAAGTATTGCCGATGTGATGACGC                                                      <  SRR4302543.1089067/94‑1 (MQ=60)
                                       ATGATTGAAGGCATCTTTACCGACGGTGATTTACGCCGTGTCTTCGATATGGGTGTGGATGTTCGTCAGTTAAGTATTGCCGATGTGATGACGC                                                      >  SRR4302543.2578678/1‑94 (MQ=60)
                                       ATGATTGAAGGCATCTTTACCGACGGTGATTTACGCCGTGTCTTCGATATGGGTGTGGATGTTCGTCAGTTAAGTATTGCCGATGTGATGACGC                                                      >  SRR4302543.1181811/1‑94 (MQ=60)
                                       ATGATTGAAGGCATCTTTACCGACGGTGATTTACGCCGTGTCTTCGATATGGGTGTGGATGTTCGTCAGTTAAGTATTGCCGATGTGATGACGC                                                      >  SRR4302543.5535020/1‑94 (MQ=60)
                                        TGATTGAAGGCATCTTTACCGACGGTGATTTACGCCGTGTCTTCGATATGGGTGTGGATGTTCGTCAGTTAAGTATTGCCGATGTGATGACGCC                                                     >  SRR4302543.5806952/1‑94 (MQ=60)
                                        TGATTGAAGGCATCTTTACCGACGGTGATTTACGCCGTGTCTTCGATATGGGTGTGGATGTTCGTCAGTTAAGTATTGCCGATGTGATGACGCC                                                     >  SRR4302543.4984117/1‑94 (MQ=60)
                                         GATTGAAGGCATCTTTACCGACGGTGATTTACGCCGTGTCTTCGATATGGGTGTGGATGTTCGTCAGTTAAGTATTGCCGATGTGATGACGCCG                                                    <  SRR4302543.4437684/94‑1 (MQ=60)
                                         GATTGAAGGCATCTTTACCGACGGTGATTTACGCCGTGTCTTCGATATGGGTGTGGATGTTCGTCAGTTAAGTATTGCCGATGTGATGACGCCG                                                    <  SRR4302543.4853645/94‑1 (MQ=60)
                                         GATTGAAGGCATCTTTACCGACGGTGATTTACGCCGTGTCTTCGATATGGGTGTGGATGTTCGTCAGTTAAGTATTGCCGATGTGATGACGCCG                                                    >  SRR4302543.4451013/1‑94 (MQ=60)
                                         GATTGAAGGCATCTTTACCGACGGTGATTTACGCCGTGTCTTCGATATGGGTGTGGATGTTCGTCAGTTAAGTATTGCCGATGTGATGACGCCG                                                    >  SRR4302543.1602808/1‑94 (MQ=60)
                                          ATTGAAGGCATCTTTACCGACGGTGATTTACGCCGTGTCTTCGATATGGGTGTGGATGTTCGTCAGTTAAGTATTGCCGATGTGATGACGCCGG                                                   >  SRR4302543.1372510/1‑94 (MQ=60)
                                          ATTGAAGGCATCTTTACCGACGGTGATTTACGCCGTGTCTTCGATATGGGTGTGGATGTTCGTCAGTTAAGTATTGCCGATGTGATGACGCCGG                                                   >  SRR4302543.835010/1‑94 (MQ=60)
                                          ATTGAAGGCATCTTTACCGACGGTGATTTACGCCGTGTCTTCGATATGGGCGTGGATGTTCGTCAGTTAAGTATTGCCGATGTGATGACGCCGG                                                   >  SRR4302543.7995538/1‑94 (MQ=60)
                                            TGAAGGCATCTTTACCGACGGTGATTTACGCCGTGTCTTCGATATGGGTGTGGATGTTCGTCAGTTAAGTATTGCCGATGTGATGACGCCGGGG                                                 <  SRR4302543.7350517/94‑1 (MQ=60)
                                            TGAAGGCATCTTTACCGACGGTGATTTACGCCGTGTCTTCGATATGGGGGTGGATGTTCGTCAGTTAAGTATTGCCGATGTGATGACGCCGGGG                                                 >  SRR4302543.4134801/1‑94 (MQ=60)
                                             TAAGGCATCGTTACCGACGGTGATTTGCGCCGTGGCTTCGATATGGGTGTGGATGTTCGTCAGTTAAGTATTGCCGATGTGATGACGCCGGGGG                                                <  SRR4302543.1094880/94‑1 (MQ=60)
                                             GAAGGCATCTTTACCGACGGTGATTTACGCCGTGTCTTCGATATGGGTGTGGATGTTCGTCAGTTAAGTATTGCCGATGTGATGACGCCGGGGG                                                >  SRR4302543.6386538/1‑94 (MQ=60)
                                             GAAGGCATCTTTACCGACGGTGATTTACGCCGTGTCTTCGATATGGGTGTGGATGTTCGTCAGTTAAGTATTGCCGATGTGATGACGCCGGGGG                                                >  SRR4302543.964923/1‑94 (MQ=60)
                                             GAAGGCATCTTTACCGACGGTGATTTACGCCGTGTCTTCGATATGGGTGTGGATGTTCGTCAGTTAAGTATTGCCGATGTGATGACGCCGGGGG                                                >  SRR4302543.964924/1‑94 (MQ=60)
                                             GAAGGCATCTTTACCGACGGTGATTTACGCCGTGTCTTCGATATGGGTGTGGATGTTCGTCAGTTAAGTATTGCCGATGTGATGACGCCGGGGG                                                >  SRR4302543.3919238/1‑94 (MQ=60)
                                             GAAGGCATCTTTACCGACGGTGATTTACGCCGTGTCTTCGATATGGGTGTGGATGTTCGTCAGTTAAGTATTGCCGATGTGATGACGCCGGGGG                                                <  SRR4302543.1094884/94‑1 (MQ=60)
                                              AAGGCATCTTTACCGACGGTGATTTACGGCGTGTCTTCGATATGGGTGTGGATGTTCGTCAGTTAAGTATTGCCGATGTGATGACGCCGGGGGG                                               <  SRR4302543.6121963/94‑1 (MQ=60)
                                              AAGGCATCTTTACCGACGGTGATTTACGCCGTGTCTTCGATATGGGTGTGGATGTTCGTCAGTTAAGTATTGCCGATGTGATGACGCCGGGGGG                                               >  SRR4302543.7490011/1‑94 (MQ=60)
                                              AAGGCATCTTTACCGACGGTGATTTACGCCGTGTCTTCGATATGGGTGTGGATGTTCGTCAGTTAAGTATTGCCGATGTGATGACGCCGGGGGG                                               <  SRR4302543.7724411/94‑1 (MQ=60)
                                               AGGCATCTTTACCGACGGTGATTTACGCCGTGTCTTCGATATGGGTGTGGATGTTCGTCAGTTAAGTATTGCCGATGTGATGACGCCGGGGGGA                                              >  SRR4302543.4529827/1‑94 (MQ=60)
                                               AGGCATCTTTACCGACGGTGATTTACGCCGTGTCTTCGATATGGGTGTGGATGTTCGTCAGTTAAGTATTGCCGATGTGATGACGCCGGGGGGA                                              >  SRR4302543.2138351/1‑94 (MQ=60)
                                               AGGCATCTTTACCGACGGTGATTTACGCCGTGTCTTCGATATGGGTGTGGATGTTCGTCAGTTAAGTATTGCCGATGTGATGACGCCGGGGGGA                                              >  SRR4302543.561895/1‑94 (MQ=60)
                                               AGGCATCTTTACCGACGGTGATTTACGCCGTGTCTTCGATATGGGTGTGGATGTTCGTCAGTTAAGTATTGCCGATGTGATGACGCCGGGGGGA                                              >  SRR4302543.262086/1‑94 (MQ=60)
                                                GGCATCTTTACCGACGGTGATTTACGCCGTGTCTTCGATATGGGCGTGGATGTTCGTCAGTTAAGTATTGCCGATGTGATGACGCCGGGGGGAA                                             <  SRR4302543.4701328/94‑1 (MQ=60)
                                                  CATCTTTACCGACGGTGATTTACGCCGTGTCTTCGATATGGGTGTGGATGTTCGTCAGTTAAGTATTGCCGATGTGATGACGCCGGGGGGAATA                                           >  SRR4302543.2746079/1‑94 (MQ=60)
                                                  CATCTTTACCGACGGTGATTTACGCCGTGTCTTCGATATGGGTGTGGATGTTCGTCAGTTAAGTATTGCCGATGTGATGACGCCGGGGGGAATA                                           >  SRR4302543.6154267/1‑94 (MQ=60)
                                                   ATCTTTACCGACGGTGATTTACGCCGTGTCTTCGATATGGGTGTGGATGTTCGTCAGTTAAGTATTGCCGATGTGATGACGCCGGGGGGAATAC                                          >  SRR4302543.3111724/1‑94 (MQ=60)
                                                   ATCTTTACCGACGGTGATTTACGCCGTGTCTTCGATATGGGTGTGGATGTTCGTCAGTTAAGTATTGCCGATGTGATGACGCCGGGGGGAATAC                                          >  SRR4302543.6394707/1‑94 (MQ=60)
                                                   ATCTTTACCGACGGTGATTTACGCCGTGTCTTCGATATGGGTGTGGATGTTCGTCAGTTAAGTATTGCCGATGTGATGACGCCGGGGGGAATAC                                          >  SRR4302543.1269235/1‑94 (MQ=60)
                                                   ATCTTTACCGACGGTGATTTACGCCGTGTCTTCGATATGGGTGTGGATGTTCGTCAGTTAAGTATTGCCGATGTGATGACGCCGGGGGGAATAC                                          >  SRR4302543.2185935/1‑94 (MQ=60)
                                                   ATCTTTACCGACGGTGATTTACGCCGTGTCTTCGATATGGGTGTGGATGTTCGTCAGTTAAGTATTGCCGATGTGATGACGCCGGGGGGAATAC                                          >  SRR4302543.3154489/1‑94 (MQ=60)
                                                   ATCTTTACCGACGGTGATTTACGCCGTGTCTTCGATATGGGTGTGGATGTTCGTCAGTTAAGTATTGCCGATGTGATGACGCCGGGGGGAATAC                                          >  SRR4302543.3625655/1‑94 (MQ=60)
                                                     CTTTACCGACGGTGATTTACGCCGTGTCTTCGATATGGGTGTGGATGTTCGTCAGTTAAGTATTGCCGATGTGATGACGCCGGGGGGAATACGT                                        <  SRR4302543.4637406/94‑1 (MQ=60)
                                                     CTTTACCGACGGTGATTTACGCCGTGTCTTCGATATGGGTGTGGATGTTCGTCAGTTAAGTATTGCCGATGTGATGACGCCGGGGGGAATACGT                                        <  SRR4302543.5588180/94‑1 (MQ=60)
                                                      TTTACCGACGGTGATTTACGCCGTGTCTTCGATATGGGTGTGGATGTTCGTCAGTTAAGTATTGCCGATGTGATGACGCCGGGGGGAATACGTG                                       <  SRR4302543.797421/94‑1 (MQ=60)
                                                      TTTACCGACGGTGATTTACGCCGTGTCTTCGATATGGGTGTGGATGTTCGTCAGTTAAGTATTGCCGATGTGATGACGCCGGGGGGAATACGTG                                       <  SRR4302543.4182959/94‑1 (MQ=60)
                                                       TTACCGACGGTGATTTACGCCGTGTCTTCGATATGGGTGTGGATGTTCGTCAGTTAAGTATTGCCGATGTGATGACGCCGGGGGGAATACGTGT                                      <  SRR4302543.6148021/94‑1 (MQ=60)
                                                        TACCGACGGTAATTTACGCCGTGTCTTCGATATGGGTGTGGATGTTCGTCAGTTAAGTATTGCCGATGTGATGACGCCGGGGGGAATACGTGTG                                     >  SRR4302543.6881278/1‑94 (MQ=60)
                                                         ACCGACGGTGATTTACGCCGTGTCTTCGATATGGGGGTGGATGTTCGTCAGTTAAGAATTGCCGATGTGATGAGGCCGGGGGGAATAGGTGTGC                                    >  SRR4302543.7280389/1‑94 (MQ=60)
                                                           CGACGGTGATTTACGCCGTGTCTTCGATATGGGTGTGGATGTTCGTCAGTTAAGTATTGCCGATGTGATGACGCCGGGGGGAATACGTGTGCGC                                  >  SRR4302543.6827407/1‑94 (MQ=60)
                                                            GACGGTGATTTACGCCGTGTCTTCGATATGGGTGTGGATGTTCGTCAGTTAAGTATTGCCGATGTGATGACGCCGGGGGGAATACGTGTGCGCC                                 >  SRR4302543.7412268/1‑94 (MQ=60)
                                                            GACGGTGATTTACGCCGTGTCTTCGATATGGGTGTGGATGTTCGTCAGTTAAGTATTGCCGATGTGATGACGCCGGGGGGAATACGTGTGCGCC                                 <  SRR4302543.5424255/94‑1 (MQ=60)
                                                            GACGGTGATTTACGCCGTGTCTTCGATATGGGTGTGGATGTTCGTCAGTTAAGTATTGCCGATGTGATGACGCCGGGGGGAATACGTGTGCGCC                                 >  SRR4302543.2073101/1‑94 (MQ=60)
                                                             ACGGTGATTTACGCCGTGTCTTCGATATGGGTGTGGATGTTCGTCAGTTAAGTATTGCCGATGTGATGACGCCGGGGGGAATACGTGTGCGCCC                                <  SRR4302543.3655634/94‑1 (MQ=60)
                                                              CGGTGATTTACGCCGTGTCTTCGATATGGGTGTGGATGTTCGTCAGTTAAGTATTGCCGATGTGATGACGCCGGGGGGAATACGTGTGCGCCCT                               >  SRR4302543.401328/1‑94 (MQ=60)
                                                              CGGTGATTTACGCCGTGTCTTCGATATGGGTGTGGATGTTCGTCAGTTAAGTATTGCCGATGTGATGACGCCGGGGGGAATACGTGTGCGCCCT                               >  SRR4302543.5672465/1‑94 (MQ=60)
                                                              CGGTGATTTACGCCGTGTCTTCGATATGGGTGTGGATGTTCGTCAGTTAAGTATTGCCGATGTGATGACGCCGGGGGGAATACGTGTGCGCCCT                               <  SRR4302543.3427846/94‑1 (MQ=60)
                                                               GGTGATTTACGCCGTGTCTTCGATATGGGTGTGGATGTTCGTCAGTTAAGTATTGCCGATGTGATGACGCCGGGGGGAATACGTGTGCGCCCTG                              >  SRR4302543.4479277/1‑94 (MQ=60)
                                                               GGTGATTTACGCCGTGTCTTCGATATGGGTGTGGATGTTCGTCAGTTAAGTATTGCCGATGTGATGACGCCGGGGGGAATACGTGTGCGCCCTG                              <  SRR4302543.6271763/94‑1 (MQ=60)
                                                                GTGATTTACGCCGTGTCTTCGATATGGGTGTGGATGTTCGTCAGTTAAGTATTGCCGATGTGATGACGCCGGGGGGAATACGTGTGCGCCCTGG                             <  SRR4302543.5069732/94‑1 (MQ=60)
                                                                GTGATTTACGCCGTGTCTTCGATATGGGTGTGGATGTTCGTCAGTTAAGTATTGCCGATGTGATGACGCCGGGGGGAATACGTGTGCGCCCTGG                             <  SRR4302543.8007261/94‑1 (MQ=60)
                                                                 TGATTTACGCCGTGTCTTCGATATGGGTGTGGATGTTCGTCAGTTAAGTATTGCCGATGTGATGACGCCGGGGGGAATACGTGTGCGCCCTGGG                            <  SRR4302543.2505582/94‑1 (MQ=60)
                                                                 TGATTTACGCCGTGTCTTCGATATGGGTGTGGATGTTCGTCAGTTAAGTATTGCCGATGTGATGACGCCGGGGGGAATACGTGTGCGCCCTGGC                            >  SRR4302543.501753/1‑94 (MQ=60)
                                                                 TGATTTACGCCGTGTCTTCGATATGGGTGTGGATGTTCGTCAGTTAAGTATTGCCGATGTGATGACGCCGGGGGGAATACGTGTGCGCCCTGGC                            >  SRR4302543.3596532/1‑94 (MQ=60)
                                                                  GATTTACGCCGTGTCTTCGATATGGGTGTGGATGTTCGTCAGTTAAGTATTGCCGATGTGATGACGCCGGGGGGAATACGTGTGCGCCCTGGCA                           >  SRR4302543.1483851/1‑94 (MQ=60)
                                                                   ATTTACGCCGTGTCTTCGATATGGGTGTGGATGTTCGTCAGTTAAGTATTGCCGATGTGATGACGCCGGGGGGAATACGTGTGCGCCCTGGCAT                          <  SRR4302543.6467327/94‑1 (MQ=60)
                                                                   ATTTACGCCGTGTCTTCGATATGGGTGTGGATGTTCGTCAGTTAAGTATTGCCGATGTGATGACGCCGGGGGGAATACGTGTGCGCCCTGGCAT                          >  SRR4302543.7028510/1‑94 (MQ=60)
                                                                   ATTTACGCCGTGTCTTCGATATGGGTGTGGATGTTCGTCAGTTAAGTATTGCCGATGTGATGACGCCGGGGGGAATACGTGTGCGCCCTGGCAT                          >  SRR4302543.1873628/1‑94 (MQ=60)
                                                                    TTTACGCCGTGTCTTCGATATGGGTGTGGATGTTCGTCAGTTAAGTATTGCCGATGTGATGACGCCGGGGGGAATACGTGTGCGCCCTGGCATT                         >  SRR4302543.4755908/1‑94 (MQ=60)
                                                                     TTACGCCGTGTCTTCGATATGGGTGTGGATGTTCGTCAGTTAAGTATTGCCGATGTGATGACGCCGGGGGGAATACGTGTGCGCCCTGGCATTC                        >  SRR4302543.1147943/1‑94 (MQ=60)
                                                                      TACGCCGTGTCTTCGATATGGGTGTGGATGTTCGTCAGTTAAGTATTGCCGATGTGATGACGCCGGGGGGAATACGTGTGCGCCCTGGCATTCT                       <  SRR4302543.1824596/94‑1 (MQ=60)
                                                                      TACGCCGTGTCTTCGATATGGGTGTGGATGTTCGTCAGTTAAGTATTGCCGATGTGATGACGCCGGGGGGAATACGTGTGCGCCCTGGCATTCT                       <  SRR4302543.527192/94‑1 (MQ=60)
                                                                      TACGCCGTGTCTTCGATATGGGTGTGGATGTTCGTCAGTTAAGTATTGCCGATGTGATGACGCCGGGGGGAATACGTGTGCGCCCTGGCATTCT                       <  SRR4302543.1121197/94‑1 (MQ=60)
                                                                       ACGCCGTGTCTTCGATATGGGTGTGGATGTTCGTCAGTTAAGTATTGCCGATGTGATGACGCCGGGGGGAATACGTGTGCGCCCTGGCATTCTG                      <  SRR4302543.2858721/94‑1 (MQ=60)
                                                                       ACGCCGTGTCTTCGATATGGGTGTGGATGTTCGTCAGTTAAGTATTGCCGATGTGATGACGCCGGGGGGAATACGTGTGCGCCCTGGCATTCTG                      <  SRR4302543.7222853/94‑1 (MQ=60)
                                                                        CGCCGTGTCTTCGATATGGGTGTGGATGTTCGTCAGTTAAGTATTGCCGATGTGATGACGCCGGGGGGAATACGTGTGCGCCCTGGCATTCTGG                     <  SRR4302543.4749394/94‑1 (MQ=60)
                                                                        CGCCGTGTCTTCGATATGGGTGTGGATGTTCGTCAGTTAAGTATTGCCGATGTGATGACGCCGGGGGGAATACGTGTGCGCCCTGGCATTCTGG                     <  SRR4302543.5420718/94‑1 (MQ=60)
                                                                         GCCGTGTCTTCGATATGGGCGTGGATGTTCGTCAGTTAAGTATTGCCGATGTGATGACGCCGGGGGGCATACGTGTGCGCCCTGGCATTCTGGC                    >  SRR4302543.3813996/1‑94 (MQ=60)
                                                                          CCGTGTCTTCGATATGGGTGTGGATGTTCGTCAGTTAAGTATTGCCGATGTGATGACGCCGGGGGGCATACGTGTGCGCCCTGGCATTCTGGCC                   >  SRR4302543.7918548/1‑94 (MQ=60)
                                                                          CCGTGTCTTCGATATGGGTGTGGATGTTCGTCAGTTAAGTATTGCCGATGTGATGACGCCGGGGGGAATACGTGTGCGCCCTGGCATTCTGGCC                   <  SRR4302543.2594629/94‑1 (MQ=60)
                                                                          CCGTGTCTTCGATATGGGTGTGGATGTTCGTCAGTTAAGTATTGCCGATGTGATGACGCCGGGGGGAATACGTGTGCGCCCTGGCATTCTGGCC                   <  SRR4302543.5133239/94‑1 (MQ=60)
                                                                          CCGTGTCTTCGATATGGGTGTGGATGTTCGTCAGTTAAGTATTGCCGATGTGATGACGCCGGGGGGAATACGTGTGCGCCCTGGCATTCTGGCC                   >  SRR4302543.3620327/1‑94 (MQ=60)
                                                                           CGTGTCTTCGATATGGGTGTGGATGTTCGTCAGTTAAGTATTGCCGATGTGATGACGCCGGGGGGAATACGTGTGCGCCCTGGCATTCTGGCCG                  >  SRR4302543.3957024/1‑94 (MQ=60)
                                                                           CGTGTCTTCGATATGGGTGTGGATGTTCGTCAGTTAAGTATTGCCGATGTGATGACGCCGGGGGGAATACGTGTGCGCCCTGGCATTCTGGCCG                  <  SRR4302543.1210581/94‑1 (MQ=60)
                                                                           CGTGTCTTCGATATGGGTGTGGATGTTCGTCAGTTAAGTATTGCCGATGTGATGACGCCGGGGGGAATACGTGTGCGCCCTGGCATTCTGGCCG                  >  SRR4302543.198365/1‑94 (MQ=60)
                                                                           CGTGTCTTCGATATGGGTGTGGATGTTCGTCAGTTAAGTATTGCCGATGTGATGACGCCGGGGGGAATACGTGTGCGCCCTGGCATTCTGGCCG                  >  SRR4302543.5087486/1‑94 (MQ=60)
                                                                            GTGTCTTCGATATGGGTGTGGATGTTCGTCAGTTAAGTATTGCCGATGTGATGACGCCGGGGGGAATACGTGTGCGCCCTGGCATTCTGGCCGT                 >  SRR4302543.1915538/1‑94 (MQ=60)
                                                                             TGTCTTCGATATGGGTGTGGATGTTCGTCAGTTAAGTATTGCCGATGTGATGACGCCGGGGGGAATACGTGTGCGCCCTGGCATTCTGGCCGTT                >  SRR4302543.1392960/1‑94 (MQ=60)
                                                                             TGTCTTCGATATGGGTGTGGATGTTCGTCAGTTAAGTATTGCCGATGTGATGACGCCGGGGGGAATACGTGTGCGCCCTGGCATTCTGGCCGTT                <  SRR4302543.319389/94‑1 (MQ=60)
                                                                              GTCTTCGATATGGGTGTGGATGTTCGTCAGTTAAGTATTGCCGATGTGATGACGCCGGGGGGAATACGTGTGCGCCCTGGCATTCTGGCCGTTG               >  SRR4302543.6962428/1‑94 (MQ=60)
                                                                              GTCTTCGATATGGGTGTGGATGTTCGTCAGTTAAGTATTGCCGATGTGATGACGCCGGGGGGAATACGTGTGCGCCCTGGCATTCTGGCCGTTG               <  SRR4302543.5514213/94‑1 (MQ=60)
                                                                                CTTCGATATGGGTGTGGATGTTCGTCAGTTAAGTATTGCCGATGTGATGACGCCGGGGGGAATACGTGTGCGCCCTGGCATTCTGGCCGTTGAG             >  SRR4302543.703286/1‑94 (MQ=60)
                                                                                CTTCGATATGGGTGTGGATGTTCGTCAGTTAAGTATTGCCGATGTGATGACGCCGGGGGGAATACGTGTGCGCCCTGGCATTCTGGCCGTTGAG             >  SRR4302543.2146167/1‑94 (MQ=60)
                                                                                CTTCGATATGGGTGTGGATGTTCGTCAGTTAAGTATTGCCGATGTGATGACGCCGGGGGGAATACGTGTGCGCCCTGGCATTCTGGCCGTTGAG             <  SRR4302543.1038866/94‑1 (MQ=60)
                                                                                CTTCGATATGGGTGTGGATGTTCGTCAGTTAAGTATTGCCGATGTGATGACGCCGGGGGGAATACGTGTGCGCCCTGGCATTCTGGCCGTTGAG             <  SRR4302543.5547480/94‑1 (MQ=60)
                                                                                CTTCGATATGGGTGTGGATGTTCGTCAGTTAAGTATTGCCGATGTGATGACGCCGGGGGGAATACGTGTGCGCCCTGGCATTCTGGCCGTTGAG             >  SRR4302543.1956227/1‑94 (MQ=60)
                                                                                CTTCGATATGGGTGTGGATGTTCGTCAGTTAAGTATTGCCGATGTGATGACGCCGGGGGGAATACGTGTGCGCCCTGGCATTCTGGCCGTTGAG             >  SRR4302543.6001778/1‑94 (MQ=60)
                                                                                 TTCGATATGGGTGTGGATGTTCGTCAGTTAAGTATTGCCGATGTGATGACGCCGGGGGGAATACGTGTGCGCCCTGGCATTCTGGCCGTTGAGG            <  SRR4302543.7887842/94‑1 (MQ=60)
                                                                                 TTCGATATGGGTGTGGATGTTCGTCAGTTAAGTATTGCCGATGTGATGACGCCGGGGGGAATACGTGTGCGCCCTGGCATTCTGGCCGTTGAGG            <  SRR4302543.6234548/94‑1 (MQ=60)
                                                                                 TTCGATATGGGTGTGGATGTTCGTCAGTTAAGTATTGCCGATGTGATGACGCCGGGGGGAATACGTGTGCGCCCTGGCATTCTGGCCGTTGAGG            <  SRR4302543.5213860/94‑1 (MQ=60)
                                                                                 TTCGATATGGGTGTGGATGTTCGTCAGTTAAGTATTGCCGATGTGATGACGCCGGGGGGAATACGTGTGCGCCCTGGCATTCTGGCCGTTGAGG            <  SRR4302543.2926323/94‑1 (MQ=60)
                                                                                   CGATATGGGTGTGGATGTTCGTCAGTTAAGTATTGCCGATGTGATGACGCCGGGGGGAATACGTGTGCGCCCTGGCATTCTGGCCGTTGAGGCA          <  SRR4302543.7279752/94‑1 (MQ=60)
                                                                                    GATATGGGTGTGGATGTTCGTCAGTTAAGTATTGCCGATGTGATGACGCCGGGGGGAATACGTGTGCGCCCTGGCATTCTGGCTGTTGAGGCAC         <  SRR4302543.2446397/94‑1 (MQ=60)
                                                                                    GATATGGGTGTGGATGTTCGTCAGTTAAGTATTGCCGATGTGATGACGCCGGGGGGAATACGTGTGCGCCCTGGCATTCTGGCCGTTGAGGCAC         <  SRR4302543.1717537/94‑1 (MQ=60)
                                                                                    GATATGGGTGTGGATGTTCGTCAGTTAAGTATTGCCGATGTGATGACGCCGGGGGGAATACGTGTGCGCCCTGGCATTCTGGCCGTTGAGGCAC         <  SRR4302543.2653349/94‑1 (MQ=60)
                                                                                    GATATGGGTGTGGATGTTCGTCAGTTAAGTATTGCCGATGTGATGACGCCGGGGGGAATACGTGTGCGCCCTGGCATTCTGGCCGTTGAGGCAC         >  SRR4302543.4890496/1‑94 (MQ=60)
                                                                                     ATATGGGTGTGGATGTTCGTCAGTTAAGTATTGCCGATGTGATGACGCCGGGGGGAATACGTGTGCGCCCTGGCATTCTGGCCGTTGAGGCACT        >  SRR4302543.3609063/1‑94 (MQ=60)
                                                                                      TATGGGTGTGGATGTTCGTCAGTTAAGTATTGCCGATGTGATGACGCCGGGGGGAATACGTGTGCGCCCTGGCATTCTGGCCGTTGAGGCACTG       >  SRR4302543.3800370/1‑94 (MQ=60)
                                                                                      TATGGGTGTGGATGTTCGTCAGTTAAGTATTGCCGATGTGATGACGCCGGGGGGAATACGGGTGGGCCCTGGCATTCTGGCCGTTGAGGCACTG       >  SRR4302543.2289747/1‑94 (MQ=60)
                                                                                      TATGGGTGTGGATGTTCGTCAGTTAAGTATTGCCGATGTGATGAAGCCGGGGGGAATAGGTGTGCGCCCTGGCATTCTGGCCGTTGAGGCAGTG       >  SRR4302543.2289746/1‑94 (MQ=60)
                                                                                       ATGGGTGTGGATGTTCGTCAGTTAAGTATTGCCGATGTGATGACGCCGGGGGGAATACGTGTGCGCCCTGGCATTCTGGCCGTTGAGGCACTGA      >  SRR4302543.1013346/1‑94 (MQ=60)
                                                                                       ATGGGTGTGGATGTTCGTCAGTTAAGTATTGCCGATGTGATGACGCCGGGGGGAATACGTGTGCGCCCTGGCATTCTGGCCGTTGAGGCACTGA      <  SRR4302543.6325595/94‑1 (MQ=60)
                                                                                       ATGGGTGTGGATGTTCGTCAGTTAAGTATTGCCGATGTGATGACGCCGGGGGGAATACGTGTGCGCCCTGGCATTCTGGCCGTTGAGGCACTGA      >  SRR4302543.302134/1‑94 (MQ=60)
                                                                                           GTGTGGATGTTCGTCAGTTAAGTATTGCCGATGTGATGACGCCGGGGGGAATACGTGTGCGCCCTGGCATTCTGGCCGTTGAGGCACTGAACTT  >  SRR4302543.7989466/1‑94 (MQ=60)
                                                                                           GTGTGGATGTTCGTCAGTTAAGTATTGCCGATGTGATGACGCCGGGGGGAATACGTGTGCGCCCTGGCATTCTGGCCGTTGAGGCACTGAACTT  >  SRR4302543.932497/1‑94 (MQ=60)
                                                                                            |                                                                                            
AAAAATCTTGGTATGACTGTCATTTGCGATGACAATATGATGATTGAAGGCATCTTTACCGACGGTGATTTACGCCGTGTCTTCGATATGGGCGTGGATGTTCGTCAGTTAAGTATTGCCGATGTGATGACGCCGGGGGGAATACGTGTGCGCCCTGGCATTCTGGCCGTTGAGGCACTGAACTT  >  NC_000913/3339609‑3339793

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 2 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑