Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.

ALE, Flask, Isolate	Predicted Mutations	Mean Coverage	Total Reads	Percent Mapped	Mapped Reads	Average Read Length
A1 F1 I1 R1	1696	279.3	15874187	97.8%	15524954	93.0

Breseq alignment

BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	3,359,299	T→C	G163G (GGT→GGC)	gltF →	GltF

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	3,359,299	0	T	C	99.7%	977.1 / NA	311	G163G (GGT→GGC)	gltF	GltF
Reads supporting (aligned to +/- strand): ref base T (0/0); major base C (166/144); minor base A (0/1); total (166/145)
Fisher's exact test for biased strand distribution p-value = 4.66e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 324 total aligned reads displayed.

AGGTTCTGCGCCTAATGGACAAAAAATTGGCGCTGCATCCATTGGTATTGACAGGTCTAATGGTGGGATTCACGCGGCGGACGATACAGGTGAAATTCCTGTCGACCTGATTCAAACTGACCACTGGTCAGCAGCGACCCCCACATGGAAAGCCTCATCTAATGGCGCATTCTGCTCGCT  >  NC_000913/3359209‑3359388

  gTTCTGCGCCTAATGGACAAAAAATTGGCGCTGCATCCATTGGTATTGACAGGTCTAATGGTGGGATTCACGCGGCGGACGATACAGGCGaaa                                                                                       >  1:567356/1‑93 (MQ=255)

  gTTCTGCGCCTAATGGACAAAAAATTGGCGCTGCATCCATTGGTATTGACAGGTCTAATGGTGGGATTCACGCGGCGGACGATACAGGCGaaa                                                                                       <  2:1738142/93‑1 (MQ=255)

   ttCTGCGCCTAATGGACAAAAAATTGGCGCTGCATCCATTGGTATTGACAGGTCTAATGGTGGGATTCACGCGGCGGACGATACAGGCGAAAt                                                                                      >  1:628791/1‑93 (MQ=255)

    tCTGCGCCTAATGGACAAAAAATTGGCGCTGCATCCATTGGTATTGACAGGTCTAATGGTGGGATTCACGCGGCGGACGATACAGGCGAAAtt                                                                                     <  1:4723952/93‑1 (MQ=255)

     cTGCGCCTAATGGACAAAAAATTGGCGCTGCATCCATTGGTATTGACAGGTCTAATGGTGGGATTCACGCGGCGGACGATACAGGCGAAATTc                                                                                    <  1:2035806/93‑1 (MQ=255)

      tGCGCCTAATGGACAAAAAATTGGCGCTGCATCCATTGGTATTGACAGGTCTAATGGTGGGATTCACGCGGCGGACGATACAGGCGAAATTcc                                                                                   <  2:4895372/93‑1 (MQ=255)

       gcgcCTAATGGACAAAAAATTGGCGCTGCATCCATTGGTATTGACAGGTCTAATGGTGGGATTCACGCGGTGGACGATACAGGCGAAATTCCt                                                                                  <  2:2756828/93‑1 (MQ=255)

       gcgcCTAATGGACAAAAAATTGGCGCTGCATCCATTGGTATTGACAGGTCTAATGGTGGGATTCACGCGGCGGACGATACAGGCGAAATTCCt                                                                                  <  2:5288621/93‑1 (MQ=255)

       gcgcCTAATGGACAAAAAATTGGCGCTGCATCCATTGGTATTGACAGGTCTAATGGTGGGATTCACGCGGCGGACGATACAGGCGAAATTCCt                                                                                  <  1:874450/93‑1 (MQ=255)

        cgcCTAATGGACAAAAAATTGGCGCTGCATCCATTGGTATTGACAGGTCTAATGGTGGGATTCACGCGGCGGACGATACAGGCGAAATTCCTg                                                                                 <  2:2366289/93‑1 (MQ=255)

         gcCTAATGGACAAAAAATTGGCGCTGCATCCATTGGTATTGACAGGTCTAATGGTGGGATTCACGCGGCGGACGATACAGGCGAAATTCCTGt                                                                                <  1:885147/93‑1 (MQ=255)

         gcCTAATGGACAAAAAATTGGCGCTGCATCCATTGGTATTGACAGGTCTAATGGTGGGATTCACGCGGCGGACGATACAGGCGAAATTCCTGt                                                                                <  1:6172600/93‑1 (MQ=255)

         gcCTAATGGACAAAAAATTGGCGCTGCATCCATTGGTATTGACAGGTCTAATGGTGGGATTCACGCGGCGGACGATACAGGCGAAATTCCTGt                                                                                <  1:3370015/93‑1 (MQ=255)

         gcCTAATGGACAAAAAATTGGCGCTGCATCCATTGGTATTGACAGGTCTAATGGTGGGATTCACGCGGCGGACGATACAGGCGAAATTCCTGt                                                                                <  2:7434737/93‑1 (MQ=255)

         gcCTAATGGACAAAAAATTGGCGCTGCATCCATTGGTATTGACAGGTCTAATGGTGGGATTCACGCGGCGGACGATACAGGCGAAATTCCTGt                                                                                <  1:2429029/93‑1 (MQ=255)

            tAATGGACAAAAAATTGGCGCTGCATCCATTGGTATTGACAGGTCTAATGGTGGGATTCACGCGGCGGACGATACAGGCGAAATTCCTGTCGa                                                                             >  1:7821229/1‑93 (MQ=255)

              aTGGACAAAAAATTGGCGCTGCATCCATTGGTATTGACAGGTCTAATGGTGGGATTCACGCGGCGGACGATACAGGCGAAATTCCTGTCGAcc                                                                           <  1:3266195/93‑1 (MQ=255)

              aTGGACAAAAAATTGGCGCTGCATCCATTGGTATTGACAGGTCTAATGGTGGGATTCACGCGGCGGACGATACAGGCGAAATTCCTGTCGAcc                                                                           >  2:6213432/1‑93 (MQ=255)

               tGGACAAAAAATTGGCGCTGCATCCATTTGTATTGACAGGGCTAATGGTGGGATTCACGCGGCGGACGATACAGGCGAAAATTCTGTCGACCt                                                                          >  2:4803683/1‑93 (MQ=255)

                 gACAAAAAATTGGCGCTGCATCCATTGGTATTGACAGGTCTAATGGTGGGATTCACGCGGCGGACGATACAGGCGAAATTCCTGTCGACCTGa                                                                        >  2:1338488/1‑93 (MQ=255)

                  gcAAAAAATTGGCGCTGCATCCATTGGTATTGACAGGTCTAATGGTGGGATTCACGCGGCGGACGATACAGGCGAAATTCCTGTCGACCTGAt                                                                       <  1:4531868/92‑1 (MQ=255)

                  aCAAAAAATTGGCGCTGCATCCATTGGTATTGACAGGTCTAATGGTGGGATTCACGCGGCGGACGATACAGGCGAAATTCCTGTCGACCTGAt                                                                       >  1:5044666/1‑93 (MQ=255)

                   cAAAAAATTGGCGCTGCATCCATTGGTATTGACAGGTCTAATGGTGGGATTCACGCGGCGGACGATACAGGCGAAATTCCTGTCGACCTGAtt                                                                      <  1:6436208/93‑1 (MQ=255)

                   cAAAAAATTGGCGCTGCATCCATTGGTATTGACAGGTCTAATGGTGGGATTCACGCGGCGGACGATACAGGCGAAATTCCTGTCGACCTGAtt                                                                      <  2:3796896/93‑1 (MQ=255)

                    aaaaaaTTGGCGCTGCATCCATTGGTATTGACAGGTCTAATGGTGGGATTCACGCGGCGGACGATACAGGCGAAATTCCTGTCGACCTGATTc                                                                     >  2:5877501/1‑93 (MQ=255)

                       aaaTTGGCGCTGCATCCATTGGTATTGACAGGTCTAATGGTGGGATTCACGCGGCGGACGATACAGGCGAAATTCCTGTCGACCTGATTCaaa                                                                  <  1:1815331/93‑1 (MQ=255)

                        aaTTGGCGCTGCATCCATTGGTATTGACAGGTCTAATGGTGGGATTCACGCGGCGGACGATACAGGCGAAATTCCTGTCGACCTGATTCAAAc                                                                 >  2:6411335/1‑93 (MQ=255)

                        aaTTGGCGCTGCATCCATTGGTATTGACAGGTCTAATGGTGGGATTCACGCGGCGGACGATACAGGCGAAATTCCTGTCGACCTGATTCAAAc                                                                 <  2:7271511/93‑1 (MQ=255)

                         aTTGGCGCTGCATCCATTGGTATTGACAGGTCTAATGGTGGGATTCACGCGGCGGACGATACAGGCGAAATTCCTGTCGACCTGATTCAAAcg                                                                >  1:306992/1‑92 (MQ=255)

                         aTTGGCGCTGCATCCATTGGTATTGACAGGTCTAATGGTGGGATTCACGCGGCGGACGATACAGGCGAAATTCCTGTCGACCTGATTCAAACt                                                                >  1:6787604/1‑93 (MQ=255)

                         aTTGGCGCGGCATCCATTGGTATTGACAGGTCTAATGGTGGGATTCACGCGGCGGACGATACAGGCGAAATTCCTGTCGACCTGATTCAAACt                                                                <  2:3709001/93‑1 (MQ=255)

                          ttGGCGCTGCATCCATTGGTATTGACAGGTCTAATGGTGGGATTCACGCGGCGGACGATACAGGCGAAATTCCTGTCGACCTGATTCAAACTg                                                               >  1:1100492/1‑93 (MQ=255)

                          ttGGCGCTGCATCCATTGGTATTGACAGGTCTAATGGTGGGATTCACGCGGCGGACGATACAGGCGAAATTCCTGTCGACCTGATTCAAACTg                                                               >  2:2107004/1‑93 (MQ=255)

                               gcTGCATCCATTGGTATTGACAGGTCTAATGGTGGGATTCACGCGGCGGACGATACAGGCGAAATTCCTGTCGACCTGATTCAAACTGACCAc                                                          >  2:3588443/1‑93 (MQ=255)

                                cTGCATCCATTGGTATTGACAGGTCTAATGGTGGGATTCACGCGGCGGACGATACAGGCGAAATTCCTGTCGACCTGATTCAAACTGACCACt                                                         <  2:3276536/93‑1 (MQ=255)

                                  gCATCCATTGGTATTGACAGGTCTAATGGTGGGATTCACGCGGCGGACGATACAGGCGAAATTCCTGTCGACCTGATTCAAACTGACCACTgg                                                       <  2:7838063/93‑1 (MQ=255)

                                   cATCCATTGGTATTGACAGGTCTAATGGTGGGATTCACGCGGCGGACGATACAGGCGAAATTCCTGTCGACCTGATTCAAACTGACCACTGGt                                                      >  1:7127558/1‑93 (MQ=255)

                                    aTCCATTGGTATTGACAGGTCTAATGGTGGGATTCACGCGGCGGACGATACAGGCGAAATTCCTGTCGACCTGATTCAAACTGACCACTGGTc                                                     <  1:1247816/93‑1 (MQ=255)

                                      ccATTGGTATTGACAGGTCTAATGGTGGGATTCACGCGGCGGACGATACAGGCGAAATTCCTGTCGACCTGATTCAAACTGACCACTGGTcag                                                   >  1:4801796/1‑93 (MQ=255)

                                       cATTGGTATTGACAGGTCTAATGGTGGGATTCACGCGGCGGACGATACAGGCGAAATTCCTGTCGACCTGATTCAAACTGACCACTGGTcagc                                                  >  1:2709503/1‑93 (MQ=255)

                                       cATTGGTATTGACAGGTCTAATGGTGGGATTCACGCGGCGGACGATACAGGCGAAATTCCTGTCGACCTGATTCAAACTGACCACTGGTcagc                                                  <  2:1077436/93‑1 (MQ=255)

                                       cATTGGTATTGACAGGTCTAATGGTGGGATTCACGCGGCGGACGATACAGGCGAAATTCCTGTCGACCTGATTCAAACTGACCACTGGTcagc                                                  <  2:683544/93‑1 (MQ=255)

                                        aTTGGTATTGACAGGTCTAATGGTGGGATTCACGCGGCGGACGATACAGGCGAAATTCCTGTCGACCTGATTCAAACTGACCACTGGTcagca                                                 <  1:6015859/93‑1 (MQ=255)

                                        aTTGGTATTGACAGGTCTAATGGTGGGATTCACGCGGCGGACGATACAGGCGAAATTCCTGTCGACCTGATTCAAACTGACCACTGGTcagca                                                 <  1:5318956/93‑1 (MQ=255)

                                        aTTGGTATTGACAGGTCTAATGGTGGGATTCACGCGGCGGACGATACAGGCGAAATTCCTGTCGACCTGATTCAAACTGACCACTGGTcagca                                                 >  1:6689848/1‑93 (MQ=255)

                                        aTTGGTATTGACAGGTCTAATGGTGGGATTCACGCGGCGGACGATACAGGCGAAATTCCTGTCGACCTGATTCAAACTGACCACTGGTcagca                                                 <  1:3566322/93‑1 (MQ=255)

                                        aTTGGTATTGACAGGTCTAATGGTGGGATTCACGCGGCGGACGATACAGGCGAAATTCCTGTCGACCTGATTCAAACTGACCACTGGTcagca                                                 <  2:6261539/93‑1 (MQ=255)

                                          tGGTATTGACAGGTCTAATTGTGGAATTCACGCGGCGGACGATACAGGCGAAATTCCTGTCGACCTGATTCAAACTGACCACTGGTCagcagc                                               <  2:7517475/93‑1 (MQ=255)

                                          tGGTATTGACAGGTCTAATGGTGGGATTCACGCGGCGGACGATACAGGCGAAATTCCTGTCGACCTGATTCAAACTGACCACTGGTcagcaga                                               >  1:4276684/1‑92 (MQ=255)

                                          tGGTATTGACAGGTCTAATGGTGGGATTCACGCGGCGGACGATACAGGCGAAATTCCTGTCGACCTGATTCAAACTGACCACTGGTCagcagc                                               >  1:2338191/1‑93 (MQ=255)

                                            gTATTGACAGGTCTAATGGTGGGATTCACGCGGCGGACGATACAGGCGAAATTCCTGTCGACCTGATTCAAACTGACCACTGGTCAGCAGCGa                                             >  1:5528087/1‑93 (MQ=255)

                                            gTATTGACAGGTCTAATGGTGGGATTCACGCGGCGGACGATACAGGCGAAATTCCTGTCGACCTGATTCAAACTGACCACTGGTCAGCAGCGa                                             <  1:5091020/93‑1 (MQ=255)

                                            gTATTGACAGGCCTAATGGTGGGATTCACGCGGCGGACGATACAGGCGAAATTCCTGTAGACCTGATTCAAAATGACCACTGGTCAGCAGCGa                                             >  2:4204133/1‑93 (MQ=255)

                                             tATTGACAGGTCTAATGGTGGGATTCACGCGGCGGACGATACAGGCGAAATTCCTGTCGACCTGATTCAAACTGACCACTGGTCAGCAGCGAc                                            >  1:3671494/1‑93 (MQ=255)

                                             tATTGACAGGTCTAATGGTGGGATTCACGCGGCGGACGATACAGGCGAAATTCCTGTCGACCTGATTCAAACTGACCACTGGTCAGCAGCGAc                                            <  1:7502716/93‑1 (MQ=255)

                                              aTTGACAGGTCTAATGGTGGGATTCACGCGGCGGACGATACAGGCGAAATTCCTGTCGACCTGATTCAAACTGACCACTGGTCAGCAGCGAcc                                           >  2:862572/1‑93 (MQ=255)

                                               ttGACAGGTCTAATGGTGGGATTCACGCGGCGGACGATACAGGCGAAATTCCTGTCGACCTGATTCAAACTGACCACTGGTCAGCAGCGcccc                                          >  2:2040160/1‑93 (MQ=255)

                                               ttGACAGGTCTAATGGTGGGATTCACGCGGCGGACGATACAGGCGAAATTCCTGTCGACCTGATTCAAACTGACCACTGGTCAGCAGCGAccc                                          >  1:1929902/1‑93 (MQ=255)

                                               ttGACAGGTCTAATGGTGGGATTCACGCGGCGGACGATACAGGCGAAATTCCTGTCGACCTGATTCAAACTGACCACTGGTCAGCAGCGAccc                                          >  2:3515552/1‑93 (MQ=255)

                                               ttGACAGGTCTAATGGTGGGATTCACGCGGCGGACGATACAGGCGAAATTCCTGTCGACCTGATTCAAACTGACCACTGGTCAGCAGCGAccc                                          <  2:3350730/93‑1 (MQ=255)

                                                 gACAGGTCTAATGGTGGGATTCACGCGGCGGACGATACAGGCGAAATTCCTGTCGACCTGATTCAAACTGACCACTGGTCAGCAGCGAccccc                                        >  1:7087536/1‑93 (MQ=255)

                                                   cAGGTCTAATGGTGGGATTCACGCGGCGGACGATACAGGCGCAATTTCTGTCGACCTGGTTCAAACTGACCACTGGTCAGCAGCGaccacccc                                      >  2:5855781/1‑91 (MQ=255)

                                                    agttCTAATGGTGTGATTCATGCGGCGGACGATACAGGCGAAATTCCTGCCGACCTGATTCAAACTGACCACTGGTCAGCAGCGACCCCcaca                                     <  2:5751131/90‑1 (MQ=255)

                                                    aGGTCTAATGGTGGGATTCACGCGGCGGACGATACAGGCGAAATTCCTGTCGACCTGATTCAAACTGACCACTGGTCAGCAGCGACCCCcaca                                     <  2:712623/93‑1 (MQ=255)

                                                     ggTCTAATGGTGGGATTCACGCGGCGGACGATACAGGCGAAATTCCTGTCGACCTGATTCAAACTGACCACTGGTCAGCAGCGACCCCCACAt                                    >  1:2853280/1‑93 (MQ=255)

                                                     ggTCTAATGGTGGGATTCACGCGGCGGACGATACAGGCGAAATTCCTGTCGACCTGATTAAAACTGACCACTGGTCAGAAGCGACCCCCACAt                                    >  1:2258562/1‑93 (MQ=255)

                                                       tCTAATGGTGGGATTCACGCGGCGGACGATACAGGCGAAATTCCTGTCGACCTGATTCAAACTGACCACTGGTCAGCAGCGACCCCCACATgg                                  >  1:212525/1‑93 (MQ=255)

                                                       tCTAATGGTGGGATTCACGCGGCGGACGATACAGGCGAAATTCCTGTCGACCTGATTCAAACTGACCACTGGTCAGCAGCGACCCCCACATgg                                  >  1:3501338/1‑93 (MQ=255)

                                                         tAATGGTGGGATTCACGCGGCGGACGATACAGGCGAAATTCCTGTCGACCTGATTCAAACTGACCACTGGTCAGCAGCGACCCCCACATGGaa                                <  2:1479585/93‑1 (MQ=255)

                                                         tAATGGTGGGATTCACGCGGCGGACGATACAGGCGAAATTCCTGTCGACCTGATTCAAACTGACCACTGGTCAGCAGCGACCCCCACATGGaa                                >  2:5525285/1‑93 (MQ=255)

                                                          aaTGGTGGGATTCACGCGGCGGACGATACAGGCGAAATTCCTGTCGACCTGATTCAAACTGACCACTGGTCAGCAGCGACCCCCACATGGaaa                               <  2:6597504/93‑1 (MQ=255)

                                                          aaTGGTGGGATTCACGCGGCGGACGATACAGGCGAAATTCCTGTCGACCTGATTCAAACTGACCACTGGTCAGCAGCGACCCCCACATGGaaa                               <  2:1042629/93‑1 (MQ=255)

                                                              tggggATTTACTCGGCGGACGATACAGGCGAAATTCCTGTCGACCCGATGTAAACTGACCACTGGTCAGCAGCGACCTCCTCATGGTAAGCCt                           >  2:7041664/3‑93 (MQ=255)

                                                               tggGATTCACGCGGCGGACGATACAGGCGAAATTCCTGTCGACCTGATTCAAACTGACCACTGGTCAGCAGCGACCCCCACATGGAAAGCCTc                          <  2:3017168/93‑1 (MQ=255)

                                                                  gATTCACGCGGCGGACGATACAGGCGAAATTCCTGTCGACCTGATTCAAACTGACCACTGGTCAGCAGCGACCCCCACATGGAAAGCCTCATc                       <  2:6660673/93‑1 (MQ=255)

                                                                  gATTCACGCGGCGGACGATACAGGCGAAATTCCTGTCGACCTGATTCAAACTGACCACTGGTCAGCAGCGACCCCCACATGGAAAGCCTCATc                       <  1:1517405/93‑1 (MQ=255)

                                                                   aTTCACGCGGCGGACGATACAGGCGAAATTCCTGTCGACCTGATTCAAACTGACCACTGGTCAGCAGCGACCCCCACATGGAAAGCCTCATCt                      <  1:853992/93‑1 (MQ=255)

                                                                    ttCACGCGGCGGACGATACAGGCGAAATTCCTGTCGACCTGATTCAAACTGACCACTGGTCAGCAGCGACCCCCACATGGAAAGCCTCATCTa                     >  2:2293338/1‑93 (MQ=255)

                                                                    ttCACGCGGCGGACGATACAGGCGAAATTCCTGTCGACCTGATTCAAACTGACCACTGGTCAGCAGCGACCCCCACATGGAAAGCCTCATCTa                     >  2:4526859/1‑93 (MQ=255)

                                                                     tCACGCGGCGGACGATACAGGCGAAATTCCTGTCGACCTGATTCAAACTGACCACTGGTCAGCAGCGACCCCCACATGGAAAGCCTCATCTaa                    <  2:3324404/93‑1 (MQ=255)

                                                                     tCACGCGGCGGACGATACAGGCGAAATTCCTGTCGACCTGATTCAAACTGACCACTGGTCAGCAGCGACCCCCACATGGAAAGCCTCATCTaa                    <  1:5390019/93‑1 (MQ=255)

                                                                     tCACGCGGCGGACGATACAGGCGAAATTCCTGTCGACCTGATTCAAACTGACCACTGGTCAGCAGCGACCCCCACATGGAAAGCCTCATCTaa                    <  2:5922922/93‑1 (MQ=255)

                                                                      cACGCGGCGGACGATACAGGCGAAATTCCTGTCGACCTGATTCAAACTGACCACTGGTCAGCAGCGACCCCCACATGGAAAGCCTCATCTAAt                   <  1:1335587/93‑1 (MQ=255)

                                                                        cgcgGCGGACGATACAGGCGAAATTCCTGTCGACCTGATTCAAACTGACCACTGGTCAGCAGCGACCCCCACATGGAAAGCCTCATCTAATgg                 >  2:427234/1‑93 (MQ=255)

                                                                        cgcgGCGGACGATACAGGCGAAATTCCTGTCGACCTGATTCAAACTGACCACTGGTCAGCAGCGACCCCCACATGGAAAGCCTCATCTAATgg                 >  2:6090379/1‑93 (MQ=255)

                                                                            gcggACGATACAGGCGAAATTCCTGTCGACCTGATTCAAACTGACCACTGGTCAGCAGCGACCCCCACATGGAAAGCCTCATCTAATGGCGCa             >  2:562244/1‑93 (MQ=255)

                                                                             gggACGATACAGGCGAAATTCCTGTCGACCTGATTCAAACTGACCACTGGTCAGCAGCGACCCCCACATGGAAAGCCTCATCTAATGGCGCAt            <  1:5158790/92‑1 (MQ=255)

                                                                              ggACGATACAGGCGAAATTCCTGTCGACCTGATTCAAACTGACCACTGGTCAGCAGCGACCCCCACATGGAAAGCCTCATCTAATGGCGCAtt           >  1:2561567/1‑93 (MQ=255)

                                                                              ggACGATACAGGCGAAATTCCTGTCGACCTGATTCAAACTGACCACTGGTCAGCAGCGACCCCCACATGGAAAGCCTCATCTAATGGCGCAtt           >  2:2610207/1‑93 (MQ=255)

                                                                              ggACGATACAGGCGAAATTCCTGTCGACCTGATTCAAACTGACCACTGGTCAGCAGCGAACCCCACATGGAAAGCCTCATCTAATGGCGCAtt           >  1:7650799/1‑93 (MQ=255)

                                                                               gACGATACAGGCGAAATTCCTGTCGACCTGATTCAAACTGACCACTGGTCAGCAGCGACCCCCACATGGAAAGCCTCATCTAATGGCGCATTc          <  1:7192993/93‑1 (MQ=255)

                                                                               gACGATACAGGCGAAATTCCTGTCGACCTGATTCAAACTGACCACTGGTCAGCAGCGACCCCCACATGGAAAGCCTCATCTAATGGCGCATTc          >  2:2657348/1‑93 (MQ=255)

                                                                                aCGATACAGGCGAAATTCCTGTCGACATGATTCAAACTGACCACTGGTCAGCAGCGACCCCCACATGGAAAGCCTCATCTAATGGCGCATTCt         <  2:3541208/93‑1 (MQ=255)

                                                                                aCGAGACAGGCGAAATTCCTGTCGACCTGATTCAAACTGACCACTGGTCAGCAGCGACCCCCACATGGAAAGCCTCATCTAATGGCGCATTCt         <  2:4432783/93‑1 (MQ=255)

                                                                                   aTACAGGCGAAATTCCTGTGGCCCTGATTCAAGCTGACCACTGGTCAGCACCGCCCCCCACATGGAAAGCGTCATATAATCGCGCATTCTGcg      >  1:4082305/1‑92 (MQ=255)

                                                                                   aTACAGGCGAAATTCCTGTCGACCTGATTCAAACTGACCACTGGTCAGCAGCGACCCCCACATGGAAAGCCTCATCTAATGGCGCATTCTGCt      <  2:6449959/93‑1 (MQ=255)

                                                                                   aTACAGGCGAAATTCCTGTCGACCTGATTCAAACTGACCACTGGTCAGCAGCGACCCCCACATGGAAAGCCTCATCTAATGGCGCATTCTGCt      >  1:4438096/1‑93 (MQ=255)

                                                                                   aTACAGGCGAAATTCCTGTCGACCTGATTCAAACTGACCACTGGTCAGCAGCGACCCCCACATGGAAAGCCTCATCTAATGGCGCATTCTGCt      >  1:7352606/1‑93 (MQ=255)

                                                                                     aCAGGCGAAATTCCTGTCGACCTGATTCAAACTGACCACTGGTCAGCAGCGACCCCCACATGGAAAGCCTCATCTAATGGCGCATTCTGCTCg    >  1:3122997/1‑93 (MQ=255)

                                                                                       aGGCGAAATTCCTGTCGACCTGATTCAAACTGACCACTGGTCAGCAGCGACCCCCACATGGAAAGCCTCATCTAATGGCGCATTCTGCTCGCt  <  2:7214902/93‑1 (MQ=255)

AGGTTCTGCGCCTAATGGACAAAAAATTGGCGCTGCATCCATTGGTATTGACAGGTCTAATGGTGGGATTCACGCGGCGGACGATACAGGTGAAATTCCTGTCGACCTGATTCAAACTGACCACTGGTCAGCAGCGACCCCCACATGGAAAGCCTCATCTAATGGCGCATTCTGCTCGCT  >  NC_000913/3359209‑3359388

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 19 ≤` `ATCG/ATCG` `< 29 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`

GATK/CNVnator alignment

BRESEQ :: bam2aln output

TTTAGGTTCTGCGCCTAATGGACAAAAAATTGGCGCTGCATCCATTGGTATTGACAGGTCTAATGGTGGGATTCACGCGGCGGACGATACAGGTGAAATTCCTGTCGACCTGATTCAAACTGACCACTGGTCAGCAGCGA‑CCCCCACATGGAAAGCCTCATCTAATGGCGCATTCTGCTCGCTGACA  >  NC_000913/3359206‑3359392

TTTAGGTTCTGCGCCTAATGGACAAAAAATTGGCGCTGCATCCATTGGTATTGACAGGTCTAATGGTGGGATTCACGCGGCGGACGATACAGGC                                                                                                <  SRR4302543.1589114/94‑1 (MQ=60)

TTTAGGTTCTGCGCCTAATGGACAAAAAATTGGCGCTGCATCCATTGGTATTGACAGGACTAATGGTGGGATTCACGCGGCGGACGATACAGGG                                                                                                >  SRR4302543.6067828/1‑94 (MQ=60)

  TAGGTTCTGCGCCTAATGGACAAAAAATTGGCGCTGCATCCATTGGTATTGACAGGTCTAATGGTGGGATTCACGCGGCGGACGATACAGGCGA                                                                                              >  SRR4302543.2668295/1‑94 (MQ=60)

   AGGTTCTGCGCCTAATGGACAAAAAATTGGCGCTGCATCCATTGGTATTGACAGGTCTAATGGTGGGATTCACGCGGCGGACGATACAGGCGAA                                                                                             <  SRR4302543.3364198/94‑1 (MQ=60)

   AGGTTCTGCGCCTAATGGACAAAAAATTGGCGCTGCATCCATTGGTATTGACAGGTCTAATGGTGGGATTCACGCGGCGGACGATACAGGCGAA                                                                                             <  SRR4302543.2059145/94‑1 (MQ=60)

    GGTTCTGCGCCTAATGGACAAAAAATTGGCGCTGCATCCATTGGTATTGACAGGTCTAATGGTGGGATTCACGCGGCGGACGATACAGGCGAAA                                                                                            >  SRR4302543.572548/1‑94 (MQ=60)

    GGTTCTGCGCCTAATGGACAAAAAATTGGCGCTGCATCCATTGGTATTGACAGGTCTAATGGTGGGATTCACGCGGCGGACGATACAGGCGAAA                                                                                            >  SRR4302543.7842523/1‑94 (MQ=60)

    GGTTCTGCGCCTAATGGACAAAAAATTGGCGCTGCATCCATTGGTATTGACAGGTCTAATGGTGGGATTCACGCGGCGGACGATACAGGCGAAA                                                                                            >  SRR4302543.4376104/1‑94 (MQ=60)

    GGTTCTGCGCCTAATGGACAAAAAATTGGCGCTGCATCCATTGGTATTGACAGGTCTAATGGTGGGATTCACGCGGCGGACGATACAGGCGAAA                                                                                            >  SRR4302543.871353/1‑94 (MQ=60)

     GTTCTGCGCCTAATGGACAAAAAATTGGCGCTGCATCCATTGGTATTGACAGGTCTAATGGTGGGATTCACGCGGCGGACGATACAGGCGAAAT                                                                                           <  SRR4302543.7173019/94‑1 (MQ=60)

     GTTCTGCGCCTAATGGACAAAAAATTGGCGCTGCATCCATTGGTATTGACAGGTCTAATGGTGGGATTCACGCGGCGGACGATACAGGCGAAAT                                                                                           >  SRR4302543.6552621/1‑94 (MQ=60)

     GTTCTGCGCCTAATGGACAAAAAATTGGCGCTGCATCCATTGGTATTGACAGGTCTAATGGTGGGATTCACGCGGCGGACGATACAGGCGAAAT                                                                                           >  SRR4302543.2157807/1‑94 (MQ=60)

     GTTCTGCGCCTAATGGACAAAAAATTGGCGCTGCATCCATTGGTATTGACAGGTCTAATGGTGGGATTCACGCGGCGGACGATACAGGCGAAAT                                                                                           >  SRR4302543.634542/1‑94 (MQ=60)

      TTCTGCGCCTAATGGACAAAAAATTGGCGCTGCATCCATTGGTATTGACAGGTCTAATGGTGGGATTCACGCGGCGGACGATACAGGCGAAATT                                                                                          >  SRR4302543.3749258/1‑94 (MQ=60)

      TTCTGCGCCTAATGGACAAAAAATTGGCGCTGCATCCATTGGTATTGACAGGTCTAATGGTGGGATTCACGCGGCGGACGATACAGGCGAAATT                                                                                          >  SRR4302543.6816546/1‑94 (MQ=60)

      TTCTGCGCCTAATGGACAAAAAATTGGCGCTGCATCCATTGGTATTGACAGGTCTAATGGTGGGATTCACGCGGCGGACGATACAGGCGAAATT                                                                                          <  SRR4302543.5156802/94‑1 (MQ=60)

       TCTGCGCCTAATGGACAAAAAATTGGCGCTGCATCCATTGGTATTGACAGGTCTAATGGTGGGATTCACGCGGCGGACGATACAGGCGAAATTC                                                                                         <  SRR4302543.4767111/94‑1 (MQ=60)

        CTGCGCCTAATGGACAAAAAATTGGCGCTGCATCCATTGGTATTGACAGGTCTAATGGTGGGATTCACGCGGCGGACGATACAGGCGAAATTCC                                                                                        <  SRR4302543.2054083/94‑1 (MQ=60)

        CTGCGCCTAATGGACAAAAAATTGGCGCTGCATCCATTGGTATTGACAGGTCTAATGGTGGGATTCACGCGGCGGACGATACAGGCGAAATTCC                                                                                        >  SRR4302543.121541/1‑94 (MQ=60)

         TGCGCCTAATGGACAAAAAATTGGCGCTGCATCCATTGGTATTGACAGGTCTAATGGTGGGATTCACGCGGCGGACGATACAGGCGAAATTCCT                                                                                       <  SRR4302543.3388117/94‑1 (MQ=60)

         TGCGCCTAATGGACAAAAAATTGGCGCTGCATCCATTGGTATTGACAGGTCTAATGGTGGGATTCACGCGGCGGACGATACAGGCGAAATTCCT                                                                                       <  SRR4302543.3138570/94‑1 (MQ=60)

          GCGCCTAATGGACAAAAAATTGGCGCTGCATCCATTGGTATTGACAGGTCTAATGGTGGGATTCACGCGGCGGACGATACAGGCGAAATTCCTG                                                                                      <  SRR4302543.737518/94‑1 (MQ=60)

          GCGCCTAATGGACAAAAAATTGGCGCTGCATCCATTGGTATTGACAGGTCTAATGGTGGGATTCACGCGGCGGACGATACAGGCGAAATTCCTG                                                                                      <  SRR4302543.7027226/94‑1 (MQ=60)

          GCGCCTAATGGACAAAAAATTGGCGCTGCATCCATTGGTATTGACAGGTCTAATGGTGGGATTCACGCGGCGGACGATACAGGCGAAATTCCTG                                                                                      <  SRR4302543.882234/94‑1 (MQ=60)

           CGCCTAATGGACAAAAAATTGGCGCTGCATCCATTGGTATTGACAGGTCTAATGGTGGGATTCACGCGGCGGACGATACAGGCGAAATTCCTGT                                                                                     >  SRR4302543.6320549/1‑94 (MQ=60)

            GCCTAATGGACAAAAAATTGGCGCTGCATCCATTGGTATTGACAGGTCTAATGGTGGGATTCACGCGGCGGACGATACAGGCGAAATTCCTGTC                                                                                    <  SRR4302543.892989/94‑1 (MQ=60)

            GCCTAATGGACAAAAAATTGGCGCTGCATCCATTGGTATTGACAGGTCTAATGGTGGGATTCACGCGGCGGACGATACAGGCGAAATTCCTGTC                                                                                    <  SRR4302543.3400286/94‑1 (MQ=60)

            GCCTAATGGACAAAAAATTGGCGCTGCATCCATTGGTATTGACAGGTCTAATGGTGGGATTCACGCGGCGGACGATACAGGCGAAATTCCTGTC                                                                                    <  SRR4302543.6230977/94‑1 (MQ=60)

            GCCTAATGGACAAAAAATTGGCGCTGCATCCATTGGTATTGACAGGTCTAATGGTGGGATTCACGCGGCGGACGATACAGGCGAAATTCCTGTC                                                                                    >  SRR4302543.239878/1‑94 (MQ=60)

            GCCTAATGGACAAAAAATTGGCGCTGCATCCATTGGTATTGACAGGTCTAATGGTGGGATTCACGCGGCGGACGATACAGGCGAAATTCCTGTC                                                                                    <  SRR4302543.2450950/94‑1 (MQ=60)

             CCTAATGGACAAAAAATTGGCGCTGCATCCATTGGTATTGACAGGTCTAATGGTGGGATTCACGCGGCGGACGATACAGGCGAAATTCCTGTCG                                                                                   <  SRR4302543.273679/94‑1 (MQ=60)

             CCTAATGGACAAAAAATTGGCGCTGCATCCATTGGTATTGACAGGTCTAATGGTGGGATTCACGCGGCGGACGATACAGGCGAAATTCCTGTCG                                                                                   >  SRR4302543.7663219/1‑94 (MQ=60)

             CCTAATGGACAAAAAATTGGCGCTGCATCCATTGGTATTGACAGGTCTAATGGTGGGATTCACGCGGCGGACGATACAGGCGAAATTCCTGTCG                                                                                   <  SRR4302543.2288918/94‑1 (MQ=60)

              CTAATGGACAAAAAATTGGCGCTGCATCCATTGGTATTGACAGGTCTAATGGTGGGATTCACGCGGCGGACGATACAGGCGAAATTCCTGTCGA                                                                                  >  SRR4302543.7894911/1‑94 (MQ=60)

                AATGGACAAAAAATTGGCGCTGCATCCATTGGTATTGACAGGTCTAATGGTGGGATTCACGCGGCGGACGATACAGGCGAAATTCCTGTCGACC                                                                                >  SRR4302543.5268727/1‑94 (MQ=60)

                 ATGGACAAAAAATTGGCGCTGCATCCATTGGTATTGACAGGTCTAATGGTGGGATTCACGCGGCGGACGATACAGGCGAAATTCCTGTCGACCT                                                                               <  SRR4302543.3295710/94‑1 (MQ=60)

                  TGGACAAAAAATTGGCGCTGCATCCATTGGTATTGACAGGTCTAATGGTGGGATTCACGCGGCGGACGATACAGGCGAAATTCCTGTCGACCTG                                                                              <  SRR4302543.5020577/94‑1 (MQ=60)

                  TGGACAAAAAATTGGCGCTGCATCCATTGGTATTGACAGGTCTAATGGTGGGATTCACGCGGCGGACGATACAGGCGAAATTCCTGTCGACCTG                                                                              <  SRR4302543.7451753/94‑1 (MQ=60)

                  TGGACAAAAAATTGGCGCTGCATCCATTGGTATTGACAGGTCTAATGGTGGGATTCACGCGGCGGACGATACAGGCGAAATTCCTGTCGACCTG                                                                              >  SRR4302543.5805756/1‑94 (MQ=60)

                    GACAAAAAATTGGCGCTGCATCCATTGGTATTGACAGGTCTAATGGTGGGATTCACGCGGCGGACGATACAGGCGAAATTCCTGTCGACCTGAT                                                                            <  SRR4302543.868671/94‑1 (MQ=60)

                    GACAAAAAATTGGCGCTGCATCCATTGGTATTGACAGGTCTAATGGTGGGATTCACGCGGCGGACGATACAGGCGAAATTCCTGTCGACCTGAT                                                                            >  SRR4302543.5090535/1‑94 (MQ=60)

                    GACAAAAAATTGGCGCTGCATCCATTGGTATTGACAGGTCTAATGGTGGGATTCACGCGGCGGACGATACAGGCGAAATTCCTGTCGACCTGAT                                                                            <  SRR4302543.7036405/94‑1 (MQ=60)

                     GCAAAAAATTGGCGCTGCATCCATTGGTATTGACAGGTCTAATGGTGGGATTCACGCGGCGGACGATACAGGCGAAATTCCTGTCGACCTGATT                                                                           <  SRR4302543.4573116/94‑1 (MQ=60)

                     ACAAAAAATTGGCGCTGCATCCATTGGTATTGACAGGTCTAATGGTGGGATTCACGCGGCGGACGATACAGGCGAAATTCCTGTCGACCTGATT                                                                           <  SRR4302543.7309534/94‑1 (MQ=60)

                     ACAAAAAATTGGCGCTGCATCCATTGGTATTGACAGGTCTAATGGTGGGATTCACGCGGCGGACGATACAGGCGAAATTCCTGTCGACCTGATT                                                                           <  SRR4302543.3667516/94‑1 (MQ=60)

                     ACAAAAAATTGGCGCTGCATCCATTGGTATTGACAGGTCTAATGGTGGGATTCACGCGGCGGACGATACAGGCGAAATTCCTGTCGACCTGATT                                                                           <  SRR4302543.4573115/94‑1 (MQ=60)

                      CAAAAAATTGGCGCTGCATCCATTGGTATTGACAGGTCTAATGGTGGGATTCACGCGGCGGACGATACAGGCGAAATTCCTGTCGACCTGATTC                                                                          <  SRR4302543.6496849/94‑1 (MQ=60)

                      AAAAAAATTGGCGCTGCATCCATTGGTATTGACAGGTCTAATGGTGGGATTCACGCGGAGGACGATACAGGCGAAATTCCTGTCGACCTGATTC                                                                          <  SRR4302543.251137/94‑1 (MQ=60)

                         AAAATTGGCGCTGCATCCATTGGTATTGACAGGTCTAATGGTGGGATTCACGCGGCGGACGATACAGGCGAAATTCCTGTCGACCTGATTCAAA                                                                       >  SRR4302543.4387285/1‑94 (MQ=60)

                          AAATTGGCGCTGCATCCATTGGTATTGACAGGTCTAATGGTGGGATTCACGCGGCGGACGATACAGGCGAAATTCCTGTCGACCTGATTCAAAC                                                                      <  SRR4302543.1831615/94‑1 (MQ=60)

                          AAATTGGCGCTGCATCCATTGGTATTGACAGGTCTAATGGTGGGATTCACGCGGCGGACGATACAGGCGAAATTCCTGTCGACCTGATTCAAAC                                                                      >  SRR4302543.3260797/1‑94 (MQ=60)

                           AATTGGCGCTGCATCCATTGGTATTGACAGGTCTAATGGTGGGATTCACGCGGCGGACGATACAGGCGAAATTCCTGTCGACCTGATTCAAACT                                                                     <  SRR4302543.3752835/94‑1 (MQ=60)

                           AATTGGCGCTGCATCCATTGGTATTGACAGGTCTAATGGTGGGATTCACGCGGCGGACGATACAGGCGAAATTCCTGTCGACCTGATTCAAACT                                                                     >  SRR4302543.6851706/1‑94 (MQ=60)

                           AATTGGCGCTGCATCCATTGGTATTGACAGGTCTAATGGTGGGATTCACGCGGCGGACGATACAGGCGAAATTCCTGTCGACCTGATTCAAACG                                                                     >  SRR4302543.309761/1‑94 (MQ=60)

                            ATTGGCGCTGCATCCATTGGTATTGACAGGTCTAATGGTGGGATTCACGCGGCGGACGATACAGGCGAAATTCCTGTCGACCTGATTCAAACTG                                                                    >  SRR4302543.1110405/1‑94 (MQ=60)

                            ATTGGCGCTGCATCCATTGGTATTGACAGGTCTAATGGTGGGATTCACGCGGCGGACGATACAGGCGAAATTCCTGTCGACCTGATTCAAACTG                                                                    >  SRR4302543.2130756/1‑94 (MQ=60)

                            ATTGGCGCTGCATCCATTGGTATTGACAGGTCTAATGGTGGGATTCACGCGGCGGACGATACAGGCGAAATTCCTGTCGACCTGATTCAAACTG                                                                    >  SRR4302543.904955/1‑94 (MQ=60)

                              TGGCGCTGCATCCATTGGTATTGACAGGTCTAATGGTGGGATTCACGCGGCGGACGATACAGGCGAAATTCCTGTCGACCTGATTCAAACTGAC                                                                  <  SRR4302543.3744407/94‑1 (MQ=60)

                               GGCGCTGCATCCATTGGTATTGACAGGTCTAATGGTGGGATTCACGCGGCGGACGATACAGGCGAAATTCCTGTCGACCTGATTCAAACTGACC                                                                 <  SRR4302543.299122/94‑1 (MQ=60)

                                GCGCTGCATCCATTGGTATTGACAGGTCTAATGGTGGGATTCACGCGGCGGACGATACAGGCGAAATTCCTGTCGACCTGATTCAAACTGACCA                                                                >  SRR4302543.4790829/1‑94 (MQ=60)

                                 CGCTGCATCCATTGGTATTGACAGGTCTAATGGTGGGATTCACGCGGCGGACGATACAGGCGAAATTCCTGTCGACCTGATTCAAACTGACCAC                                                               >  SRR4302543.6581829/1‑94 (MQ=60)

                                   CTGCATCCATTGGTATTGACAGGTCTAATGGTGGGATTCACGCGGCGGACGATACAGGCGAAATTCCTGTCGACCTGATTCAAACTGACCACTG                                                             >  SRR4302543.4313896/1‑94 (MQ=60)

                                    TGCATCCATTGGTATTGACAGGTCTAATGGTGGGATTCACGCGGCGGACGATACAGGCGAAATTCCTGTCGACCTGATTCAAACTGACCACTGG                                                            >  SRR4302543.7164590/1‑94 (MQ=60)

                                    TGCATCCATTGGTATTGACAGGTCTAATGGTGGGATTCACGCGGCGGACGATACAGGCGAAATTCCTGTCGACCTGATTCAAACTGACCACTGG                                                            >  SRR4302543.3416912/1‑94 (MQ=60)

                                    TGCATCCATTGGTATTGACAGGTCTAATGGTGGGATTCACGCGGCGGACGATACAGGCGAAATTCCTGTCGACCTGATTCAAACTGACCACTGG                                                            <  SRR4302543.1837515/94‑1 (MQ=60)

                                    TGCATCCATTGGTATTGACAGGTCTAATGGTGGGATTCACGCGGCGGACGATACAGGCGAAATTCCTGTCGACCTGATTCAAACTGACCACTGG                                                            <  SRR4302543.3583640/94‑1 (MQ=60)

                                     GCATCCATTGGTATTGACAGGTCTAATGGTGGGATTCACGCGGCGGACGATACAGGCGAAATTCCTGTCGACCTGATTCAAACTGACCACTGGT                                                           >  SRR4302543.7196810/1‑94 (MQ=60)

                                      CATCCATTGGTATTGACAGGTCTAATGGTGGGATTCACGCGGCGGACGATACAGGCGAAATTCCTGTCGACCTGATTCAAACTGACCACTGGTC                                                          <  SRR4302543.5410140/94‑1 (MQ=60)

                                      CATCCATTGGTATTGACAGGTCTAATGGTGGGATTCACGCGGCGGACGATACAGGCGAAATTCCTGTCGACCTGATTCAAACTGACCACTGGTC                                                          >  SRR4302543.1431262/1‑94 (MQ=60)

                                       ATCCATTGGTATTGACAGGTCTAATGGTGGGATTCACGCGGCGGACGATACAGGCGAAATTCCTGTCGACCTGATTCGAACTGACCACTGGTCA                                                         >  SRR4302543.1412547/1‑94 (MQ=60)

                                       ATCCATTGGTATTGACAGGTCTAATGGTGGGATTCACGCGGCGGACGATACAGGCGAAATTCCTGTCGACCTGATTCAAACTGACCACTGGTCC                                                         >  SRR4302543.3341638/1‑94 (MQ=60)

                                       ATCCATTGGTATTGACAGGTCTAATGGTGGGATTCACGCGGCGGACGATACAGGCGAAATTCCTGTCGACCTGATTCAAACTGACCACTGGTCA                                                         >  SRR4302543.995763/1‑94 (MQ=60)

                                       ATCCATTGGTATTGACAGGTCTAATGGTGGGATTCACGCGGCGGACGATACAGGCGAAATTCCTGTCGACCTGATTCAAACTGACCACTGGTCA                                                         >  SRR4302543.2242861/1‑94 (MQ=60)

                                       ATCCATTGGTATTGACAGGTCTAATGGTGGGATTCACGCGGCGGACGATACAGGCGAAATTCCTGTCGACCTGATTCAAACTGACCACTGGTCA                                                         <  SRR4302543.1259015/94‑1 (MQ=60)

                                        TCCATTGGTATTGACAGGTCTAATGGTGGGATTCACGCGGCGGACGATACAGGCGAAATTCCTGTCGACCTGATTCACACTGACCACTGGTCAG                                                        >  SRR4302543.4661228/1‑94 (MQ=60)

                                        TCCATTGGTATTGACAGGTCTAATGGTGGGATTCACGCGGCGGACGATACAGGCGAAATTCCTGTCGACCTGATTCAAACTGACCACTGGTCAG                                                        >  SRR4302543.4845679/1‑94 (MQ=60)

                                        ACCATTGGTATTGACAGGTCTAATGGTGGGATTCACGCGGCGGACGATACAGGCGAAATTCCTGTCGACCTGATTCAAACTGACCACTGGTCAG                                                        <  SRR4302543.2635195/94‑1 (MQ=60)

                                         CCATTGGTATTGACAGGTCTAATGGTGGGATTCACGCGGCGGACGATACAGGCGAAATTCCTGTCGACCTGATTCAAACTGACCACTGGTCAGC                                                       >  SRR4302543.3052058/1‑94 (MQ=60)

                                         CCATTGGTATTGACAGGTCTAATGGTGGGATTCACGCGGCGGACGATACAGGCGAAATTCCTGTCGACCTGATTCAAACTGACCACTGGTCAGC                                                       >  SRR4302543.7229506/1‑94 (MQ=60)

                                         CCATTGGTATTGACAGGTCTAATGGTGGGATTCACGCGGCGGACGATACAGGCGAAATTCCTGTCGACCTGATTCAAACTGACCACTGGTCAGC                                                       >  SRR4302543.2734105/1‑94 (MQ=60)

                                          CATTGGTATTGACAGGTCTAATGGTGGGATTCACGCGGCGGACGATACAGGCGAAATTCCTGTCGACCTGATTCAAACTGACCACTGGTCAGCA                                                      >  SRR4302543.6752998/1‑94 (MQ=60)

                                           ATTGGTGTTGACAGGTTTAATGGTGGGATTCACGCGGCGGACGATACAGGCGAAATTCCTGTCGACCTGATTCAAACTGACCACTGGTCAGCAG                                                     <  SRR4302543.6071612/94‑1 (MQ=60)

                                           ATTGGTATTGACAGGTCTAATGGTGGGATTCACGCGGCGGACGATACAGGCGAAATTCCTGTCGACCTGATTCAAACTGACCACTGGTCAGCAG                                                     <  SRR4302543.5367018/94‑1 (MQ=60)

                                           ATTGGTATTGACAGGTCTAATGGTGGGATTCACGCGGCGGACGATACAGGCGAAATTCCTGTCGACCTGATTCAAACTGACCACTGGTCAGCAG                                                     >  SRR4302543.5371548/1‑94 (MQ=60)

                                           ATTGGTATTGACAGGTCTAATGGTGGGATTCACGCGGCGGACGATACAGGCGAAATTCCTGTCGACCTGATTCAAACTGACCACTGGTCAGCAG                                                     >  SRR4302543.7932289/1‑94 (MQ=60)

                                           ATTGGTATTGACAGGTCTAATGGTGGGATTCACGCGGCGGACGATACAGGCGAAATTCCTGTCGACCTGATTCAAACTGACCACTGGTCAGCAG                                                     >  SRR4302543.4991926/1‑94 (MQ=60)

                                           ATTGGTATTGACAGGTCTAATGGTGGGATTCACGCGGCGGACGATACAGGCGAAATTCCTGTCGACCTGATTCAAACTGACCACTGGTCAGCAG                                                     <  SRR4302543.6071489/94‑1 (MQ=60)

                                           ATTGGTATTGACAGGTCTAATGGTGGGATTCACGCGGCGGACGATACAGGCGAAATTCCTGTCGACCTGATTCAAACTGACCACTGGTCAGCAG                                                     >  SRR4302543.5904818/1‑94 (MQ=60)

                                           ATTGGTATTGACAGGTCTAATGGTGGGATTCACGCGGCGGACGATACAGGCGAAATTCCTGTCGACCTGATTCAAACTGACCACTGGTCAGCAG                                                     >  SRR4302543.3539768/1‑94 (MQ=60)

                                           ATTGGTATTGACAGGTCTAATGGTGGGATTCACGCGGCGGACGATACAGGCGAAATTCCTGTCGACCTGATTCAAACTGACCACTGGTCAGCAG                                                     <  SRR4302543.3597873/94‑1 (MQ=60)

                                           ATTGGTATTGACAGGTCTAATGGGGGGATTCACGCGGCGGCCGATACAGGCGAAATTCCGGCGGACCTGTTTCAAATTGACCACTGGTCggcgc                                                     >  SRR4302543.2488819/1‑89 (MQ=55)

                                            TTGGTATTGACAGGTCTAATGGTGGGATTCACGCGGCGGACGATACAGGCGAAATTCCTGTCGACCTGATTCAAACTGACCACTGGTCAGCAGC                                                    >  SRR4302543.2359407/1‑94 (MQ=60)

                                            TTGGTATTGACAGGTCTAATGGTGGGATTCACGCGGCGGACGATACAGGCGAAATTCCTGTCGACCTGATTCAAACTGACCACTGGTCAGCAGA                                                    >  SRR4302543.4315555/1‑94 (MQ=60)

                                             TGGTATTGACAGGTCTAATGGTGGGATTCACGCGTCGGACGATACAGGCGAAATTCCTGTCGACCTGATTCAAACTGACCACTGGTCAGCAGCG                                                   <  SRR4302543.6134360/94‑1 (MQ=60)

                                             TGGTATTGACAGGTCTAATGGTGGGATTCACGCGGCGGACGATACAGGCGAAATTCCTGTCGACCTGATTCAAACTGACCACTGGTCAGCAGCG                                                   <  SRR4302543.6774575/94‑1 (MQ=60)

                                             TGGTATTGACAGGTCTAATGGTGGGATTCACGCGGCGGACGATACAGGCGAAATTCCTGTCGACCTGATTCAAACTGACCACTGGTCAGCAGCG                                                   >  SRR4302543.248376/1‑94 (MQ=60)

                                             TGGTATTGACAGGTCTAATGGTGGGATTCACGCGGCGGACGATACAGGCGAAATTCCTGTCGACCTGATTCAAACTGACCACTGGTCAGCAGCG                                                   <  SRR4302543.4230044/94‑1 (MQ=60)

                                              GGTATTGACAGGTCTAATGGTGGGATTCACGCGGCGGACGATACAGGCGAAATTCCTGTCGACCTGATTCAAACTGACCACTGGTCAGCAGCGA                                                  >  SRR4302543.5578303/1‑94 (MQ=60)

                                              GGTATTGACAGGTCTAATGGTGGGATTCACGCGGCGGACGATACAGGCGAAATTCCTGTCGACCTGATTCAAACTGACCACTGGTCAGCAGCGA                                                  >  SRR4302543.5191619/1‑94 (MQ=60)

                                               GTATTGACAGGTCTAATGGTGGGATTCACGCGGCGGACGATACAGGCGAAATTCCTGTCGACCTGATTCAAACTGACCACTGGTCAGCAGCGA‑C                                                <  SRR4302543.5137152/94‑1 (MQ=60)

                                               GTATTGACAGGTCTAATGGTGGGATTCACGCGGCGGACGATACAGGCGAAATTCCTGTCGACCTGATTCAAACTGACCACTGGTCAGCAGCGA‑C                                                >  SRR4302543.3703730/1‑94 (MQ=60)

                                               GTATTGACAGGTCTAATGGTGGGATTCACGCGGCGGACGATACAGGCGAAATTCCTGTCGACCTGATTCAAACTGACCACCGGTCAGCAGCGA‑C                                                >  SRR4302543.3703726/1‑94 (MQ=60)

                                                TATTGACAGGTCTAATGGTGGGATTCACGCGGCGGACGATACAGGCGAAATTCCTGTCGACCTGATTCAAACTGACCACTGGTCAGCAGCGA‑CC                                               <  SRR4302543.7574446/94‑1 (MQ=60)

                                                TATTGACAGGTCTAATGGTGGGATTCACGCGGCGGACGATACAGGCGAAATTCCTGTCGACCTGATTCAAACTGACCACTGGTCAGCAGCGA‑CC                                               >  SRR4302543.7249379/1‑94 (MQ=60)

                                                TATTGACAGGTCTAATGGTGGGATTCACGCGGCGGACGATACAGGCGAAATTCCTGTCGACCTGATTCAAACTGACCACTGGTCAGCAGCGA‑CC                                               <  SRR4302543.1329518/94‑1 (MQ=60)

                                                TATTGACAGGTCTAATGGTGGGATTCACGCGGCGGACGATACAGGCGAAATTCCTGTCGACCTGATTCAAACTGACCACTGGTCAGCAGCGA‑CC                                               <  SRR4302543.1329517/94‑1 (MQ=60)

                                                 ATTGACAGGTCTAATGGTGGGATTCACGCGGCGGACGATACAGGCGAAATTCCTGTCGACCTGATTCAAACTGACCACTGGTCAGCAGCGA‑CCC                                              >  SRR4302543.1947269/1‑94 (MQ=60)

                                                 ATTGACAGGTCTAATGGTGGGATTCACGCGGCGGACGATACAGGCGAAATTCCTGTCAACCTGATTCAAACTCACCACTGGTCAGTAGAGA‑CCC                                              >  SRR4302543.6343557/1‑94 (MQ=60)

                                                   TGACAGGTCTAATGGTGGGATTCACGCGGCGGACGATACAGGCGAAATTCCTGTCGACCTGATTCAAACTGACCACTGGTCAGCAGCGA‑CCCCC                                            <  SRR4302543.1608037/94‑1 (MQ=60)

                                                   TGACAGGTCTAATGGTGGGATTCACGCGGCGGACGATACAGGCGAAATTCCTGTCGACCTGATTCAAACTGACCACTGGTCAGCAGCGA‑CCCCC                                            >  SRR4302543.7156364/1‑94 (MQ=60)

                                                      CAGGTCTAATGGTGGGATTCACGCGGCGGACGATACAGGCGAAATTCCTGTCGACCTGATTCAAACTGACCACTGGTCAGCAGCGA‑CCCCCACA                                         >  SRR4302543.848228/1‑94 (MQ=60)

                                                       AGGTCTAATGGTGGGATTCACGCGGCGGACGATACAGGCGAAATTCCTGTCGACCTGATTCAAACTGACCACTGGTCAGCAGCGA‑CCCCCACAT                                        >  SRR4302543.5235555/1‑94 (MQ=60)

                                                       AGGTCTAATGGTGGGATTCACGCGGCGGACGATACAGGCGAAATTCCTGTCGACCTGATTCAAACTGACCACTGGTCAGCAGCGA‑CCCCCACAT                                        >  SRR4302543.2879317/1‑94 (MQ=60)

                                                       AGGTCTAATGGTGGGATTCACGCGGCGGACGATACAGGCGAAATTCCTGTCGACCTGATTAAAACTGACCACTGGTCAGAAGCGA‑CCCCCACAT                                        >  SRR4302543.2279136/1‑94 (MQ=60)

                                                        GGTCTAATGGTGGGATTCACGCGGCGGACGATACAGGCGAAATTCCTGTCGACCTGATTCAAACTGACCACTGGTCAGCAGCGA‑CCCCCACATG                                       <  SRR4302543.1157739/94‑1 (MQ=60)

                                                        GGTCTAATGGTGGGATTCACGCGGCGGACGATACAGGCGAAATTCCTGTCGACCTGATTCAAACTGACCACTGGTCAGCAGCGA‑CCCCCACATG                                       <  SRR4302543.2372011/94‑1 (MQ=60)

                                                         GTCTAATGGTGGGATTCACGCGGCGGACGATACAGGCGAAATTCCTGTCGACCTGATTCAAACTGACCACTGGTCAGCAGCGA‑CCCCCACATGG                                      >  SRR4302543.3532652/1‑94 (MQ=60)

                                                         GTCTAATGGTGGGATTCACGCGGCGGACGATACAGGCGAAATTCCTGTCGACCTGATTCAAACTGACCACTGGTCAGCAGCGA‑CCCCCACATGG                                      >  SRR4302543.214342/1‑94 (MQ=60)

                                                            TAATGGTGGGATTCACGCGGCGGACGATACAGGCGAAATTCCTGTCGACCTGATTCAAACTGACCACTGGTCAGCAGCGA‑CCCCCACATGGAAA                                   <  SRR4302543.1621951/94‑1 (MQ=60)

                                                            TAATGGTGGGATTCACGCGGCGGACGATACAGGCGAAATTCCTGTCGACCTGATTCAAACTGACCACTGGTCAGCAGCGA‑CCCCCACATGGAAA                                   <  SRR4302543.4562488/94‑1 (MQ=60)

                                                             AATGGTGGGATTCACGCGGCGGACGATACAGGCGAAATTCCTGTCGACCTGATTCAAACTGACCACTGGTCAGCAGCGA‑CCCCCACATGGAAAG                                  >  SRR4302543.5503693/1‑94 (MQ=60)

                                                             AATGGTGGGATTCACGCGGCGGACGATACAGGCGAAATTCCTGTCGACCTGATTCAAACTGACCACTGGTCAGCAGCGA‑CCCCCACATGGAAAG                                  >  SRR4302543.2281222/1‑94 (MQ=60)

                                                              ATGGTGGGATTCACGCGGCGGACGATACAGGCGAAATTCCTGTCGACCTGATTCAAACTGACCACTGGTCAGCAGCGA‑CCCCCACATGGAAAGC                                 >  SRR4302543.5108015/1‑94 (MQ=60)

                                                                GGTGGGATTCACGCGGCGGACGATACAGGCGAAATTCCTGTCGACCTGATTCAAACTGACCACTGGTCAGCAGCGA‑CCCCCACATGGAAAGCCT                               <  SRR4302543.603014/94‑1 (MQ=60)

                                                                  GGGGATTCACGCGGCGGACGATACAGGCGAAATTCCTGTCGACCTGATTCAAACTGACCACTGGTCAGCAGCGA‑CCCCCACATGGAAAGCCTCA                             <  SRR4302543.2302179/94‑1 (MQ=60)

                                                                   GGGATTCACGCGGCGGACGATACAGGCGAAATTCCTGTCGACCTGATTCAAACTGACCACTGGTCAGCAGCGA‑CCCCCACATGGAAAGCCTCAT                            <  SRR4302543.7230955/94‑1 (MQ=60)

                                                                   GGGATTCACGCGGCGGACGATACAGGCGAAATTCCTGTCGACCTGATTCAAACTGACCACTGGTCAGCAGCGA‑CCCCCACATGGAAAGCCTCAT                            <  SRR4302543.1906288/94‑1 (MQ=60)

                                                                    GGATTCACGCGGCGGACGATACAGGCGAAATTCCTGTCGACCTGATTCAAACTGACCACTGGTCAGCAGCGA‑CCCCCACATGGAAAGCCTCATC                           >  SRR4302543.6413249/1‑94 (MQ=60)

                                                                    GGATTCACGCGGCGGACGATACAGGCGAAATTCCTGTCGACCTGATTCAAACTGACCACTGGTCAGCAGCGA‑CCCCCACATGGAAAGCCTCATC                           <  SRR4302543.3213609/94‑1 (MQ=60)

                                                                    GGATTCACGCGGCGGACGATACAGGCGAAATTCCTGTCGACCTGATTCAAACTGACCACTGGTCAGCAGCGA‑CCCCCACATGGAAAGCCTCATC                           <  SRR4302543.2806642/94‑1 (MQ=60)

                                                                     GATTCACGCGGCGGACGATACAGGCGAAATTCCTGTTGACCTGATTCAAACTGACCACTGGTCAGCAGCGA‑CCCCCACATGGAAAGCCTCATCT                          <  SRR4302543.781023/94‑1 (MQ=60)

                                                                     GATTCACGCGGCGGACGATACAGGCGAAATTCCTGTCGACCTGATTCAAACTGACCACTGGTCAGCAGCGA‑CCCCCACATGGAAAGCCTCATCT                          <  SRR4302543.5124291/94‑1 (MQ=60)

                                                                     GATTCACGCGGCGGACGATACAGGCGAAATTCCTGTCGACCTGATTCAAACTGACCACTGGTCAGCAGCGA‑CCCCCACATGGAAAGCCTCATCT                          <  SRR4302543.781022/94‑1 (MQ=60)

                                                                     GATTCACGCGGCGGACGATACAGGCGAAATTCCTGTCGACCTGATTCAAACTGACCACTGGTCAGCAGCGA‑CCCCCACATGGAAAGCCTCATCT                          <  SRR4302543.1531032/94‑1 (MQ=60)

                                                                      ATTCACGCGGCGGACGATACAGGCGAAATTCCTGTCGACCTGATTCAAACTGACCACTGGTCAGCAGCGACCCCCCACATGGAAAGCCTCATCT                          >  SRR4302543.2814088/1‑94 (MQ=60)

                                                                      ATTCACGCGGCGGACGATACAGGCGAAATTCCTGTCGACCTGATTCAAACTGACCACTGGTCAGCAGCGA‑CCCCCACATGGCAAGCCTCATCTA                         >  SRR4302543.758329/1‑94 (MQ=60)

                                                                      ATTCACGCGGCGGACGATACAGGCGAAATTCCTGTCGACCTGATTCAAACTGACCACTGGTCAGCAGCGA‑CCCCCACATGGAAAGCCTCATCTA                         <  SRR4302543.861587/94‑1 (MQ=60)

                                                                       TTCACGCGGCGGACGATACAGGCGAAATTCCTGTCGACCTGATTCAAACTGACCACTGGTCAGCAGCGA‑CCCCCACATGGAAAGCCTCATCTAA                        >  SRR4302543.2052813/1‑94 (MQ=60)

                                                                       TTCACGCGGCGGACGATACAGGCGAAATTCCTGTCGACCTGATTCAAACTGACCACTGGTCAGCAGCGA‑CCCCCACATGGAAAGCCTCATCTAA                        >  SRR4302543.924058/1‑94 (MQ=60)

                                                                        TCACGCGGCGGACGATACAGGCGAAATTCCTGTCGACCTGATTCAAACTGACCACTGGTCAGCAGCGA‑CCCCCACATGGAAAGCCTCATCTAAT                       <  SRR4302543.5439007/94‑1 (MQ=60)

                                                                        TCACGCGGCGGACGATACAGGCGAAATTCCTGTCGACCTGATTCAAACTGACCACTGGTCAGCAGCGA‑CCCCCACATGGAAAGCCTCATCTAAT                       <  SRR4302543.5659918/94‑1 (MQ=60)

                                                                         CACGCGGCGGACGATACAGGCGAAATTCCTGTCGACCTGATTCAAACTGACCACTGGTCAGCAGCGA‑CCCCCACATGGAAAGCCTCATCTAATG                      <  SRR4302543.1347498/94‑1 (MQ=60)

                                                                             CGGCGGACGATACAGGCGAAATTCCTGTCGACCTGATTCAAACTGACCACTGGTCAGCAGCGA‑CCCCCACATGGAAAGCCTCATCTAATGGCGC                  >  SRR4302543.883228/1‑94 (MQ=60)

                                                                               GCGGACGATACAGGCGAAATTCCTGTCGACCTGATTCAAACTGACCACTGGTCAGCAGCGA‑CCCCCACATGGAAAGCCTCATCTAATGGCGCAT                <  SRR4302543.5216155/94‑1 (MQ=60)

                                                                                GGGACGATACAGGCGAAATTCCTGTCGACCTGATTCAAACTGACCACTGGTCAGCAGCGA‑CCCCCACATGGAAAGCCTCATCTAATGGCGCATT               <  SRR4302543.5205414/94‑1 (MQ=60)

                                                                                CGGACGATACAGGCGAAATTCCTGTCGACCTGATTCAAACTGACCACTGGTCAGCAGCGA‑CCCCCACATGGAAAGCCTCATCTAATGGCGCATT               >  SRR4302543.2584974/1‑94 (MQ=60)

                                                                                CGGACGATACAGGCGAAATTCCTGTCGACCTGATTCAAACTGACCACTGGTCAGCAGCGA‑CCCCCACATGGAAAGCCTCATCTAATGGCGCATT               <  SRR4302543.1978485/94‑1 (MQ=60)

                                                                                CGGACGATACAGGCGAAATTCCTGTCGACCTGATTCAAACTGACCACTGGTCAGCAGCGA‑ACCCCACATGGAAAGCCTCATCTAATGGCGCATT               >  SRR4302543.7723344/1‑94 (MQ=60)

                                                                                 GGACGATACAGGCGAAATTCCTGTCGACCTGATTCAAACTGACCACTGGTCAGCAGCGA‑CCCCCACATGGAAAGCCTCATCTAATGGCGCATTC              <  SRR4302543.7437388/94‑1 (MQ=60)

                                                                                 GGACGATACAGGCGAAATTCCTGTCGACCTGATTCAAACTGACCACTGGTCAGCAGCGA‑CCCCCACATGGAAAGCCTCATCTAATGGCGCATTC              <  SRR4302543.886625/94‑1 (MQ=60)

                                                                                  GGCGATACAGGCGAAATTCCTGTCGACCTGATTCAAACTGACCACTGGTCAGCAGCGA‑CCCCCACATGGAAAGCCTCATCTAATGGCGCATTCT             <  SRR4302543.6652278/94‑1 (MQ=60)

                                                                                  GACGATACAGGCGAAATTCCTGTCGACCTGATTCAAACTGACCACTGGTCAGCAGCGA‑CCCCCACATGGAAAGCCTCATCTAATGGCGCATTCT             <  SRR4302543.7262748/94‑1 (MQ=60)

                                                                                   ACGATACAGGCGAAATTCCTGTCGACCTGATTCAAACTGACCACTGGTCAGCAGCGA‑CCCCCACATGGAAAGCCTCATCTAATGGCGCATTCTG            <  SRR4302543.6406495/94‑1 (MQ=60)

                                                                                    CGATACAGGCGAAATTCCTGTCGACCTGATTCAAACTGACCACTGGTCAGCAGCGA‑CCCCCACATGGAAAGCCTCATCTAATGGCGCATTCTGC           >  SRR4302543.5498335/1‑94 (MQ=60)

                                                                                    CGATACAGGCGAAATTCCTGTCGACCTGATTCAAACTGACCACTGGTCAGCAGCGA‑CACCCACATGGAAAGCCTCATCTAATGGCGCATTCTGT           >  SRR4302543.4808333/1‑94 (MQ=60)

                                                                                     GATACAGGCGAAATTCCTGTCGACCTGATTCAAACTGACCACTGGTCAGCAGCGA‑CCCCCACATGGAAAGCCTCATCTAATGGCGCATTCTGCT          >  SRR4302543.348083/1‑94 (MQ=60)

                                                                                     GATACAGGCGAAATTCCTGTCGACCTGATTCAAACTGACCACTGGTCAGCAGCGA‑CCCCCACATGGAAAGCCTCATCTAATGGCGCATTCTGCT          >  SRR4302543.4478289/1‑94 (MQ=60)

                                                                                     GATACAGGCGAAATTCCTGTCGACCTGATTCAAACTGACCACTGGTCAGCAGCGA‑CCCCCACATGGAAAGCCTCATCTAATGGCGCATTCTGCT          >  SRR4302543.7423336/1‑94 (MQ=60)

                                                                                      ATAGAGGAGAAATTCCTGTCGACCTGATTCGAACTGTCCACTGGTCAGCAGCGC‑CCCCCACATGGAAAGCCTCATCTAATGGCGCATTCTGCTC         <  SRR4302543.4713865/94‑1 (MQ=60)

                                                                                      ATACAGGCGAAATTCCTGTCGACCTGATTCAAACTGACCACTGGTCAGCAGCGA‑CCCCCACATGGAAAGCCTCATCTAATGGCGCATTCTGCTC         >  SRR4302543.190082/1‑94 (MQ=60)

                                                                                      ATACAGGCGAAATTCCTGTCGACCTGATTCAAACTGACCACTGGTCAGCAGCGA‑CCCCCACATGGAAAGCCTCATCTAATGGCGAATTCTGCTC         <  SRR4302543.4713866/94‑1 (MQ=60)

                                                                                       TACAGGCGAAATTCCTGTCGACCTGATTCAAACTGACCACTGGTCAGCAGCGA‑CCCCCACATGGAAAGCCTCATCTAATGGCGCATTCTGCTCG        >  SRR4302543.5699675/1‑94 (MQ=60)

                                                                                       TACAGGCGAAATTCCTGTCGACCTGATTCAAACTGACCACTGGTCAGCAGCGA‑CCCCCACATGGAAAGCCTCATCTAATGGCGCATTCTGCTCG        >  SRR4302543.3148221/1‑94 (MQ=60)

                                                                                       TACAGGCGAAATTCCTGTCGACCTGATTCAAACTGACCACTGGTCAGCAGCGA‑CCCCCACATGGAAAGCCTCATCTAATGGCGCATTCTGCTCG        >  SRR4302543.3151085/1‑94 (MQ=60)

                                                                                          AGGCGAAATTCCTGTCGACCTGATTCAAACTGACCACTGGTCAGCAGCGA‑CCCCCACATGGAAAGCCTCATCTAATGGCGCATTCTGCTCGCTG     >  SRR4302543.1874067/1‑94 (MQ=60)

                                                                                          AGGCGAAATTCCTGTCGACCTGATTCAAACTGACCACTGGTCAGCAGCGA‑CCCCCACATGGAAAGCCTCATCTAATGGCGCATTCTGCTCGCTG     >  SRR4302543.3688222/1‑94 (MQ=60)

                                                                                            GCGAAATTCCTGTCGACCTGATTCAAACTGACCACTGGTCAGCAGCGA‑CCCCCACATGGAAAGCCTCATCTAATGGCGCATTCTGCTCGCTGAC   >  SRR4302543.2275091/1‑94 (MQ=60)

                                                                                             CGAAATTCCTGTCGACCTGATTCAAACTGACCACTGGTCAGCAGCGA‑CCCCCACATGGAAAGCCTCATCTAATGGCGCATTCTGCTCGCTGACA  >  SRR4302543.5546451/1‑94 (MQ=60)

                                                                                             CGAAATTCCTGTCGACCTGATTCAAACTGACCACTGGTCAGCAGCGA‑CCCCCACATGGAAAGCCTCATCTAATGGCGCATTCTGCTCGCTGACA  >  SRR4302543.2586393/1‑94 (MQ=60)

TTTAGGTTCTGCGCCTAATGGACAAAAAATTGGCGCTGCATCCATTGGTATTGACAGGTCTAATGGTGGGATTCACGCGGCGGACGATACAGGTGAAATTCCTGTCGACCTGATTCAAACTGACCACTGGTCAGCAGCGA‑CCCCCACATGGAAAGCCTCATCTAATGGCGCATTCTGCTCGCTGACA  >  NC_000913/3359206‑3359392

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 0 ≤` `ATCG/ATCG` `< 6 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`