Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A1 F1 I1 R1 1696 279.3 15874187 97.8% 15524954 93.0

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 3,370,778 A→G V145A (GTA→GCA)  nanA ← N‑acetylneuraminate lyase

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009133,370,7780AG99.7% 1210.2 / ‑5.3 386V145A (GTA→GCA) nanAN‑acetylneuraminate lyase
Reads supporting (aligned to +/- strand):  ref base A (1/0);  new base G (197/188);  total (198/188)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 5.84e-01

Only 100 of 396 total aligned reads displayed.

TCCATCTGATAGAGATCGCCAGAGGTCTGTTTCAGCGCACCTACGCCAGGCAATGTAACAAGTGTGTTGATCTGATCCAGGGTCAGTTTTACCCCACTCAGGGCTGGAATGTTGTACACCACCATCGGCAAACCATCCGCCGAATCAATAATTGCCCGATAGTGATCGCAGTGTTCTTCA  >  NC_000913/3370688‑3370867
                                                                                          |                                                                                         
    tCTGATAGAGATCGCCAGAGGTCTGTTTCAGCGCACCTACGCCAGGCAATGTAACAAGTGTGTTGATCTGATCCAGGGTCAGTTTTGCCCCAc                                                                                     >  2:1190785/1‑93 (MQ=255)
    tCTGATAGAGATCGCCAGAGGTCTGTTTCAGCGCACCTACGCCAGGCAATGTAACAAGTGTGTTGATCTGATCCAGGGTCAGTTTTGCCCCAc                                                                                     <  2:4958379/93‑1 (MQ=255)
    tCTGATAGAGATCGCCAGAGGTCTGTTTCAGCGCACCTACGCCAGGCAATGTAACAAGTGTGTTGATCTGATCCAGGGTCAGTTTTGCCCCAc                                                                                     >  1:2786190/1‑93 (MQ=255)
      tGATAGAGATCGCCAGAGGTCTGTTTCAGCGCACCTACGCCAGGCAATGTAACAAGTGTGTTGATCTGATCCAGGGTCAGTTTTGCCCCACTc                                                                                   >  2:6495736/1‑93 (MQ=255)
      tGATAGAGATCGCCAGAGGTCTGTTTCAGCGCACCTACGCCAGGCAATGTAACAAGTGTGTTGATCTGATCCAGGGTCAGTTTTGCCCCACTc                                                                                   >  1:659784/1‑93 (MQ=255)
       gATAGAGATCGCCAGAGGTCTGTTTCAGCGCACCTACGCCAGGCAATGTAACAAGTGTGTTGATCTGATCCAGGGTCAGTTTTGCCCCACTCa                                                                                  <  1:7338722/93‑1 (MQ=255)
       gATAGAGATCGCCAGAGGTCTGTTTCAGCGCACCTACGCCAGGCAATGTAACAAGTGTGTTGATCTGATCCAGGGTCAGTTTTGCCCCACTCa                                                                                  >  1:284845/1‑93 (MQ=255)
        aTAGAGATCGCCAGAGGTCTGTTTCAGCGCACCTACGCCAGGCAATGTAACAAGTGTGTTGATCTGATCCAGGGTCAGTTTTGCCCCACTCAg                                                                                 >  1:4089006/1‑93 (MQ=255)
         tAGAGATCGCCAGAGGTCTGTTTCAGCGCACCTACGCCAGGCAATGTAACAAGTGTGTTGATCTGATCCAGGGTCAGTTTTGCCCCACTCAgg                                                                                <  2:4877867/93‑1 (MQ=255)
         tAGAGATCGCCAGAGGTCTGTTTCAGCGCACCTACGCCAGGCAATGTAACAAGTGTGTTGATCTGATCCAGGGTCAGTTTTGCCCCACTCAgg                                                                                <  2:1071370/93‑1 (MQ=255)
         tAGAGATCGCCAGAGGTCTGTTTCAGCGCACCTACGCCAGGCAATGTAACAAGTGTGTTGATCTGATCCAGGGTCAGTTTTGCCCCACTCAgg                                                                                >  1:4414395/1‑93 (MQ=255)
           gagaTCGCCAGAGGTCTGTTTCATCGCACCTACGCCAGGCAATGTAACAAGTGTGTTGATCTGATCCAGGGTCAGTTTTGCCCCACTCAGGGc                                                                              <  2:4284258/93‑1 (MQ=255)
           gagaTCGCCAGAGGTCTGTTTCAGCGCACCTACGCCAGGCAATGTAACAAGTGTGTTGATCTGATCCAGGGTCAGTTTTGCCCCACTCAGGGc                                                                              <  1:5852944/93‑1 (MQ=255)
           gagaTCGCCAGAGGTCTGTTTCAGCGCACCTACGCCAGGCAATGTAACAAGTGTGTTGATCTGATCCAGGGTCAGTTTTGCCCCACTCAGGGc                                                                              >  2:1334870/1‑93 (MQ=255)
           gagaTCGCCAGAGGTCTGTTTCAGCGCACCTACGCCAGGCAATGTAACAAGTGTGTTGATCTGATCCAGGGTCAGTTTTGCCCCACTCAGGGc                                                                              >  2:5086889/1‑93 (MQ=255)
             gaTCGCCAGAGGTCTGTTTCAGCGCACCTACGCCAGGCAATGTAACAAGTGTGTTGATCTGATCCAGGGTCAGTTTTGCCCCACTCAGGGCTg                                                                            >  1:6808948/1‑93 (MQ=255)
              aTCGCCAGAGGTCTGTTTCAGCGCACCTACGCCAGGCAATGTAACAAGTGTGTTGATCTGATCCAGGGTCAGTTTTGCCCCACTCAGGGCTgg                                                                           >  1:3188514/1‑93 (MQ=255)
               tCGCCAGAGGTCTGTTTCAGCGCACCTACGCCAAGCAATGTAACAAGTGTGTTGATCTGATCCAGGGTCAGTTTTGCCCCACTCAGGGCTGGa                                                                          >  2:2573312/1‑93 (MQ=255)
                cGCCAGAGGTCTGTTTCAGCGCACCTACGCCAGGCAATGTAACAAGTGTGTTGATCTGATCCAGGGTCAGTTTTGCCCCACTCAGGGCTGGaa                                                                         <  2:5673145/93‑1 (MQ=255)
                cGCCAGAGGTCTGTTTCAGCGCACCTACGCCAGGCAATGTAACAAGTGTGTTGATCTGATCCAGGGTCAGTTTTGCCCCACTCAGGGCTGGaa                                                                         <  2:4581139/93‑1 (MQ=255)
                 gCCAGAGGTCTGTTTCAGCGCACCTACGCCAGGCAATGTAACAAGTGTGTTGATCTGATCCAGGGTCAGTTTTGCCCCACTCAGGGCTGGAAt                                                                        <  2:6784399/93‑1 (MQ=255)
                 gCCAGAGGTCTGTTTCAGCGCACCTACGCCAGGCAATGTAACAAGTGTGTTGATCTGATCCAGGGTCAGTTTTGCCCCACTCAGGGCTGGAAt                                                                        >  2:5507178/1‑93 (MQ=255)
                   cAGAGGTCTGTTTCAGCGCACCTACGCCAGGCAATGTAACAAGTGTGTTGATCTGATCCAGGGTCAGTTTTGCCCCACTCAGGGCTGGAAtgt                                                                      <  1:4656627/93‑1 (MQ=255)
                    agagGTCTGTTTCAGCGCACCTACGCCAGGCAATGTAACAAGTGTGTTGATCTGATCCAGGGTCAGTTTTGCCCCACTCAGGGCTGGAAtgtt                                                                     <  2:4024797/93‑1 (MQ=255)
                    agagGTCTGTTTCAGCGCACCTACGCCAGGCAATGTAACAAGTGTGTTGATCTGATCCAGGGTCAGTTTTGCCCCACTCAGGGCTGGAAtgtt                                                                     >  1:7168514/1‑93 (MQ=255)
                    agagGTCTGTTTCAGCGCACCTACGCCAGGCAATGTAACAAGTGTGTTGATCTGATCCAGGGTCAGTTTTGCCCCACTCAGGGCTGGAAtgtt                                                                     <  2:3057503/93‑1 (MQ=255)
                    agagGTCTGTTTCAGCGCACCTACGCCAGGCAATGTAACAAGTGTGTTGATCTGATCCAGGGTCAGTTTTGCCCCACTCAGGGCTGGAAtgtt                                                                     >  1:5477855/1‑93 (MQ=255)
                    agagGTCTGTTTCAGCGCACCTACGCCAGGCAATGTAACAAGTGTGTTGATCTGATCCAGGGTCAGTTTTGCCCCACTCAGGGCTGGAAtgtt                                                                     >  2:5410796/1‑93 (MQ=255)
                     gagGTCTGTTTCAGCGCACCTACGCCAGGCAATGTAACAAGTGTGTTGATCTGATCCAGGGTCAGTTTTGCCCCACTCAGGGCTGGAAtgttg                                                                    <  2:7359561/93‑1 (MQ=255)
                      agGTCTGTTTCAGCGCACCTACGCCAGGCAATGTAACAAGTGTGTTGATCTGATCCAGGGTCAGTTTTGCCCCACTCAGGGCTGGAAtgttgt                                                                   >  1:7584366/1‑93 (MQ=255)
                        gTCTGTTTCAGCGCACCTACGCCAGGCAATGTAACAAGTGTGTTGATCTGATCCAGGGTCAGTTTTGCCCCACTCAGGGCTGGAATGTTGTac                                                                 >  2:3198112/1‑93 (MQ=255)
                        gTCTGTTTCAGCGCACCTACGCCAGGCAATGTAACAAGTGTGTTGATCTGATCCAGGGTCAGTTTTGCCCCACTCAGGGCTGGAATGTTGTac                                                                 <  1:5677067/93‑1 (MQ=255)
                         tCTGTTTCAGCGCACCTACGCCAGGCAATGTAACAAGTGTGTTGATCTGATCCAGGGTCAGTTTTGCCCCACTCAGGGCTGGAATGTTGTaca                                                                >  1:887528/1‑93 (MQ=255)
                         tCTGTTTCAGCGCACCTACGCCAGGCAATGTAACAAGTGTGTTGATCTGATCCAGGGTCAGTTTTGCCCCACTCAGGGCTGGAATGTTGTaca                                                                >  1:3897470/1‑93 (MQ=255)
                         tCTGTTTCAGCGCACCTACGCCAGGCAATGTAACAAGTGTGTTGATCTGATCCAGGGTCAGTTTTGCCCCACTCAGGGCTGGAATGTTGTaca                                                                >  2:166042/1‑93 (MQ=255)
                                cAGCGCACCTACGCCAGGCAATGTAACAAGTGTGTTGATCTGATCCAGGGTCAGTTTTGCCCCACTCAGGGCTGGAATGTTGTACACCACCAt                                                         <  2:1953730/93‑1 (MQ=255)
                                 aGCGCACCTACGCCAGGCAATGTAACAAGTGTGTTGATCTGATCCAGGGTCAGTTTTGCCCCACTCAGGGCTGGAATGTTGTACACCACCATc                                                        <  2:6007632/93‑1 (MQ=255)
                                 aGCGCACCTACGCCAGGCAATGTAACAAGTGTGTTGATCTGATCCAGGGTCAGTTTTGCCCCACTCAGGGCTGGAATGTTGTACACCACCATc                                                        >  2:7184347/1‑93 (MQ=255)
                                    gcACCTACGCCAGGCAATGTAACAAGTGTGTTGATCTGATCCAGGGTCAGTTTTGCCCCACTCAGGGCTGGAATGTTGTACACCACCATCGGc                                                     >  2:5770516/1‑93 (MQ=255)
                                     cACCTACGCCAGGCAATGTAACAAGTGTGTTGATCTGATCCAGGGTCAGTTTTGCCCCACTCAGGGCTGGAATGTTGTACACCACCATCGGCa                                                    >  1:4298719/1‑93 (MQ=255)
                                     cACCTACGCCAGGCAATGTAACAAGTGTGTTGATCTGATCCAGGGTCAGTTTTGCCCCACTCAGGGCTGGAATGTTGTACACCACCATCGCCa                                                    >  1:1360846/1‑93 (MQ=255)
                                       ccTACGCCAGGCAATGTAACAAGTGTGTTGATCTGATCCAGGGTCAGTTTTGCCCCACTCAGGGCTGGAATGTTGTACACCACCACCGGCaaa                                                  <  2:4160821/93‑1 (MQ=255)
                                         tACGCCAGGCAATGTAACAAGTGTGTTGATCTGATCCAGGGTCAGTTTTGCCCCACTCAGGGCTGGAATGTTGTACACCACCATCGGCAAAcc                                                <  1:7714029/93‑1 (MQ=255)
                                         tACGCCAGGCAATGTAACAAGTGTGTTGATCTGATCCAGGGTCAGTTTTGCCCCACTCAGGGCTGGAATGTTGTACACCACCATCGGCAAAcc                                                >  1:3757709/1‑93 (MQ=255)
                                          aCGCCAGGCAATGTAACAAGTGTTTTGATCTGATCCAGGGTCAGGTTTAACCCACTCAGGGCTGGAATTCTGTAAACCACCATCGGCAAAcct                                               >  2:2717041/1‑92 (MQ=255)
                                          aCGCCAGGCAATGTAACAAGTGTGTTGATCTGATCCAGGGTCAGTTTTGCCCCACTCAGGGCTGGAATGTTGTACACCACCATCGGCAAACCa                                               <  2:3297063/93‑1 (MQ=255)
                                             ccAGGCAATGTAACAAGTGTGTTGATCTGATCCAGGGTCAGTTTTGCCCCACTCAGGGCTGGAATGTTGTACACCACCATCGGCAAACCATcc                                            <  1:2150830/93‑1 (MQ=255)
                                              cAGGCAATGTAACAAGTGTGTTGATCTGATCCAGGGTCAGTTTTGCCCCACTCAGGGCTGGAATGTTGTACACCACCATCGGCAAACCATccg                                           >  1:630488/1‑93 (MQ=255)
                                              cAGGCAATGTAACAAGTGTGTTGATCTGATCCAGGGTCAGTTTTGCCCCACTCAGGGCTGGAATGTTGTACACCACCATCGGCAAACCATccg                                           >  1:2637686/1‑93 (MQ=255)
                                               aGGCAATGTAACAAGTGTGTTGATCTGATCCAGGGTCAGTTTTGCCCCACTCAGGGCTGGAATGTTGTACACCACCATCGGCAAACCATccgc                                          <  1:502836/93‑1 (MQ=255)
                                               aGGCAATGTAACAAGTGTGTTGATCTGATCCAGGGTCAGTTTTGCCCCACTCAGGGCTGGAATGTTGTACACAACCATCGGCAAACCATccgc                                          >  2:6571561/1‑93 (MQ=255)
                                                ggCAATGTAACAAGTGTGTTGATCTGATCCAGGGTCAGTTTTGCCCCACTCAGGGCTGGAATGTTGTACACCACCATCGGCAAACCATccgcc                                         <  1:1471966/93‑1 (MQ=255)
                                                  cAATGTAACAAGTGTGTTGATCTGATCCAGGGTCAGTTTTGCCCCACTCAGGGCTGGAATGTTGTACACCACCATCGGCAAACCATCCGCCGa                                       >  1:483038/1‑93 (MQ=255)
                                                   aaTGTAACAAGTGTGTTGATCTGATCCAGGGTCAGTTTTGCCCCACTCAGGGCTGGAATGTTGTACACCACCATCGGCAAACCATCCGCCGaa                                      >  2:3904454/1‑93 (MQ=255)
                                                     tGTAACAAGTGTGTTGATCTGATCCAGGGTCAGTTTTGCCCCACTCAGGGCTGGAATGTTGTACACCACCATCGGCAAACCATCCGCCGAATc                                    >  1:6058697/1‑93 (MQ=255)
                                                       tAACAAGTGTGTTGATCTGATCCAGGGTCAGTTTTGCCCCACTCAGGGCTGGAATGTTGTACACCACCATCGGCAAACCATCCGCCGAATCaa                                  >  1:7406092/1‑93 (MQ=255)
                                                       tAACAAGTCTGTTGATCTGATCCAGGGTCAGTTTTGCCCCACTCAGGGCTGGAATGTTGTACACCACCATCGGCAAACCATCCGCCGAATCaa                                  <  1:4344688/93‑1 (MQ=255)
                                                        aaCAAGTGTGTTGATCTGATCCAGGGTCAGTTTTGCCCCACTCAGGGCTGGAATGTTGTACACCACCATCGGCAAACCATCCGCCGAATCaat                                 <  2:3610279/93‑1 (MQ=255)
                                                        aaCAAGTGTGTTGATCTGATCCAGGGTCAGTTTTGCCCCACTCAGGGCTGGAATGTTGTACACCACCATCGGCAAACCATCCGCCGAATCaat                                 >  1:6915812/1‑93 (MQ=255)
                                                         aCAAGTGTGTTGATCTGATCCAGGGTCAGTTTTGCCCCACTCAGGGCTGGAATGTTGTACACCACCATCGGCAAACCATCCGCCGAATCaata                                <  2:4372659/93‑1 (MQ=255)
                                                         aCAAGTGTGTTGATCTGATCCAGGGTCAGTTTTGCCCCACTCAGGGCTGGAATGTTGTACACCACCATCGGCAAACCATCCGCCGAATCaata                                <  1:5208059/93‑1 (MQ=255)
                                                         aCAAGTGTGTTGATCTGATCCAGGGTCAGTTTTGCCCCACTCAGGGCTGGAATGTTGTACACCACCATCGGCAAACCATCCGCCGAATCaata                                <  1:5989191/93‑1 (MQ=255)
                                                          cAAGTGTGTTGATCTGATCCAGGGTCAGTTTTGCCCCACTCAGGGCTGGAATGTTGTACACCACCATCGGCAAACCATCCGCCGAATCaataa                               >  1:2446538/1‑93 (MQ=255)
                                                           aaGTGTGTTGATCTGATCCAGGGTCAGTTTTGCCCCACTCAGGGCTGGAATGTTGTACACCACCATCGGCAAACCATCCGCCGAATCaataat                              <  2:1276016/93‑1 (MQ=255)
                                                             gtgtgtTGATCTGATCCAGGGTCAGTTTTGCCCCACTCAGGGCTGGAATGTTGTACACCACCATCGGCAAACCATCCGCCGAATCAATAATTg                            >  1:1571732/1‑93 (MQ=255)
                                                              tgtgtTGATCTGATCCAGGGTCAGTTTTGCCCCACTCAGGGCTGGAATGTTGTACACCACCATCGGCAAACCATCCGCCGAATCAATAATTGc                           <  2:2938758/93‑1 (MQ=255)
                                                              tgtgtTGATCTGATCCAGGGTCAGTTTTGCCCCACTCAGGGCTGGAATGTTGTACACCACCATCGGCAAACCATCCGCCGAATCAATAATTGc                           >  2:7421763/1‑93 (MQ=255)
                                                              tgtgtTGATCTGATCCAGGGTCAGTTTTGCCCCACTCAGGGCTGGAATGTTGTACACCACCATCGGCAAACCATCCGCCGAATCAATAATTGc                           <  2:6093282/93‑1 (MQ=255)
                                                               gtgtTGATCTGATCCAGGGTCAGTTTTGCCCCACTCAGGGCTGGAATGTTGTACACCACCATCGGCAAACCATCCGCCGAATCAATAATTGcc                          <  2:4443722/93‑1 (MQ=255)
                                                                tgtTGATCTGATCCAGGGTCAGTTTTGCCCCACTCAGGGCTGGAATGTTGTACACCACCATCGGCAAACCATCCGCCGAATCAATAATTGccc                         <  1:3715175/93‑1 (MQ=255)
                                                                 gtTGATCTGATCCAGGGTCAGTTTTGCCCCACTCAGGGCTGGAATGTTGTACACCACCATCGGCAAACCATCCGCCGAATCAATAATTGCCCg                        >  1:1968413/1‑93 (MQ=255)
                                                                 gtTGATCTGATCCAGGGTCAGTTTTGCCCCACTCAGGGCTGGAATGTTGTACACCACCATCGGCAAACCATCCGCCGAATCAATAATTGCCCg                        >  2:1850132/1‑93 (MQ=255)
                                                                  ttGATCTGATCCAGGGTCAGTTTTGCCCCACTCAGGGCTGGAATGTTGTACACCACCATCGGCAAACCATCCGCCGAATCAATAATTGCCCGa                       >  1:1163089/1‑93 (MQ=255)
                                                                  ttGATCTGATCCAGGGTCAGTTTTGCCCCACTCAGGGCTGGAATGTTGTACACCACCATCGGCAAACCATCCGCCGAATCAATAATTGCCCGa                       >  2:7896997/1‑93 (MQ=255)
                                                                  ttGATCTGATCCAGGGGCAGTTTTGCCCCACTCAGGGCTGGAATGTTGTACACCACCATCGGCAAACCACCCGCCGAATCAATAATTGCCCGa                       <  2:1564904/93‑1 (MQ=255)
                                                                   tgatctgatcCAGGGTCAGTTTTGCCCCACTCAGGGCTGGAATGTTGTACACCACCATCGGCAAACCATCCGCCGAATCAATAATTGCCCGAt                      <  2:2838303/93‑1 (MQ=255)
                                                                    gatctgatcCAGGGTCAGTTTTGCCCCACTCAGGGCTGGAATGTTGTACACCACCATCGGCAAACCATCCGCCGAATCAATAATTGCCCGATa                     <  1:1812308/93‑1 (MQ=255)
                                                                    gatctgatcCAGGGTCAGTTTTGCCCCACTCAGGGCTGGAATGTTGTACACCACCATCGGCAAACCATCCGCCGAATCAATAATTGCCCGATa                     <  2:2191395/93‑1 (MQ=255)
                                                                    gatctgatcCAGGGTCAGTTTTGCCCCACTCAGGGCTGGAATGTTGTACACCACCATCGGCAAACCATCCGCCGAATCAATAATTGCCCGATa                     >  1:307459/1‑93 (MQ=255)
                                                                    gatctgatcCAGGGTCAGTTTTGCCCCACTCAGGGCTGGAATGTTGTACACCACCATCGGCAAACCATCCGCCGAATCAATAATTGCCCGATa                     <  1:6418901/93‑1 (MQ=255)
                                                                      tctgatcCAGGGTCAGTTTTGCCCCACTCAGGGCTGGAATGTTGTACACCACCATCGGCAAACCATCCGCCGAATCAATAATTGCCCGATAGt                   >  2:3426785/1‑93 (MQ=255)
                                                                        tgatcCAGGGTCAGTTTTGCCCCACTCAGGGCTGGAATGTTGTACACCACCATCGGCAAACCATCCGCCGAATCAATAATTGCCCGATAGTGa                 >  2:4759852/1‑93 (MQ=255)
                                                                        tgatcCAGGGTCAGTTTTGCCCCACTCAGGGCTGGAATGTTGTACACCACCATCGGCAAACCATCCGCCGAATCAATAATTGCCCGATAGTGa                 <  2:6135340/93‑1 (MQ=255)
                                                                         gatcCAGGGTCAGTTTTGCCCCACTCAGGGCTGGAATGTTGTACACCACCATCGGCAAACCATCCGCCGAATCAATAATTGCCCGATAGTGAt                <  2:6330886/93‑1 (MQ=255)
                                                                          atcCAGGGTCAGTTTTGCCCCACTCAGGGCTGGAATGTTGTACACCACCATCGGCAAACCATCCGCCGAATCAATAATTGCCCGATAGTGATc               >  1:1686339/1‑93 (MQ=255)
                                                                          atcCAGGGTCAGTTTTGCCCCACTCAGGGCTGGAATGTTGTACACCACCATCGGCAAACCATCCGCCGAATCAATAATTGCCCGATAGTGATc               >  2:6633655/1‑93 (MQ=255)
                                                                           tcCAGGGTCAGTTTTGCCCCACTCAGGGCTGGAATGTTGTACACCACCATCGGCAAACCATCCGCCGAATCAATAATTGCCCGATAGTGATCg              >  2:866923/1‑93 (MQ=255)
                                                                           tcCAGGGTCAGTTTTGCCCCACTCAGGGCTGGAATGTTGTACACCACCATCGGCAAACCATCCGCCGAATCAATAATTGCCCGATAGTGATCg              >  2:382348/1‑93 (MQ=255)
                                                                           tcCAGGGTCAGTTTTGCCCCACTCAGGACTGGAATGTTGTACACCACCATCGGCAAACCATCCGCCGAATCAATAATTGCCCGATAGTGATCg              <  1:3557310/93‑1 (MQ=255)
                                                                            ccAGGGTCAGTTTTGCCCCACTCAGGGCTGGAATGTTGTACACCACCATCGGCAAACCATCCGCCGAATCAATAATTGCCCGATAGTGATCGc             <  1:7864218/93‑1 (MQ=255)
                                                                             cAGGGTCAGTTTTGCCCCACTCAGGGCTGGAATGTTGTACACCACCATCGGCAAACCATCCGCCGAATCAATAATTGCCCGATAGTGATCGCa            >  1:3793082/1‑93 (MQ=255)
                                                                              aGGGTCAGTTTTGCCCCACTCAGGGCTGGAATGTTGTACACCACCATCGGCAAACCATCCGCCGAATCAATAATTGCCCGATAGTGATCGCAg           <  1:5402438/93‑1 (MQ=255)
                                                                               gggTCAGTTTTGCCCCACTCAGGGCTGGAATGTTGTACACCACCATCGGCAAACCATCCGCCGAATCAATAATTGCCCGATAGTGATCGCAgt          <  2:3090384/93‑1 (MQ=255)
                                                                               gggTCAATTTTGCCCCACTCAGGGCTGGAATGTTGTACACCACCATCGGCAAACCATCCGCCGAATCAATAATTGCCCGATAGTGATCGCAgt          <  2:7031988/93‑1 (MQ=255)
                                                                                ggTCAGTTTTGCCCCACTCAGGGCTGGAATGTTGTACACCACCATCGGCAAACCATCCGCCGAATCAATAATTGCCCGATAGTGATCGCAgtg         <  1:6668368/93‑1 (MQ=255)
                                                                                ggTCAGTTTTGCCCCACTCAGGGCTGGAATGTTGTACACCACCATCGGCAAACCATCCGCCGAATCAATAATTGCCCGATAGTGATCGCAgtg         >  2:7644513/1‑93 (MQ=255)
                                                                                 gTCAGTTTTGCCCCACTCAGGGCTGGAATGTTGTACACCACCATCGGCAAACCATCCGCCGAATCAATAATTGCCCGATAGTGATCGCAgtgt        >  1:5559721/1‑93 (MQ=255)
                                                                                 gTCAGTTTTGCCCCACTCAGGGCTGGAATGTTGTACACCACCATCGGCAAACCATCCGCCGAATCAATAATTGCCCGATAGTGATCGCAgtgt        <  2:7269743/93‑1 (MQ=255)
                                                                                      ttttGCCCCACTCAGGGCTGGAATGTTGTACACCACCATCGGCAAACCATCCGCCGAATCAATAATTGCCCGATAGTGATCGCAGTGttcttc   <  1:7106348/93‑1 (MQ=255)
                                                                                      ttttGCCCCACTCAGGGCTGGAATGTTGTACACCACCATCGGCAAACCATCCGCCGAATCAATAATTGCCCGATAGTGATCGCAGTGttcttc   >  2:6851043/1‑93 (MQ=255)
                                                                                          |                                                                                         
TCCATCTGATAGAGATCGCCAGAGGTCTGTTTCAGCGCACCTACGCCAGGCAATGTAACAAGTGTGTTGATCTGATCCAGGGTCAGTTTTACCCCACTCAGGGCTGGAATGTTGTACACCACCATCGGCAAACCATCCGCCGAATCAATAATTGCCCGATAGTGATCGCAGTGTTCTTCA  >  NC_000913/3370688‑3370867

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

BRESEQ :: bam2aln output Only 200 of 205 total aligned reads displayed.
TGCTCCATCTGATAGAGATCGCCAGAGGTCTGTTTCAGCGCACCTACGCCAGGCAATGTAACAAGTGTGTTGATCTGATCCAGGGTCAGTTTTACCCCACTCAGGGCTGGAATGTTGTACACCACCATCGGCAAACCATCCGCCGAATCAATAATTGCCCGATAGTGATCGCAGTGTTCTTCAAAGC  >  NC_000913/3370685‑3370871
                                                                                             |                                                                                             
TGCTCCATCTGATAGAGATCGCCAGAGGTCTGTTTCAGCGCACCTACGCCAGGCAATGTAACAAGTGTGTTGATCTGATCCAGGGTCAGTTTTG                                                                                               <  SRR4302543.4007982/94‑1 (MQ=60)
TGCTCCATCTGATAGAGATCGCCAGAGGTCTGTTTCAGCGCACCTACGCCAGGCAATGTAACAAGTGTGTTGATCTGATCCAGGGTCAGTTTTG                                                                                               <  SRR4302543.5757452/94‑1 (MQ=60)
TGCTCCATCTGATAGAGATCGCCAGAGGTCTGTTTCAGCGCACCTACGCCAGGCAATGTAACAAGTGTGTTGATCTGATCCAGGGTCAGTTTTG                                                                                               <  SRR4302543.1599005/94‑1 (MQ=60)
CGCTCCATCTGATAGAGAACGCCAGAGGGCTGTTTCAGCGCACCTACGCCAGGCAATGTAACAAGTGTGTTGATCTGATCCAGGGTCAGTTTTG                                                                                               <  SRR4302543.2720490/94‑1 (MQ=60)
 GCTCCATCTGATAGAGATCGCCAGAGGTCTGTTTCAGCGCACCTACGCCAGGCAATGTAACAAGTGTGTTGATCTGATCCAGGGTCAGTTTTGC                                                                                              >  SRR4302543.5455253/1‑94 (MQ=60)
 GCTCCATCTGATAGAGATCGCCAGAGGTCTGTTTCAGCGCACCTACGCCAGGCAATGTAACAAGTGTGTTGATCTGATCCAGGGTCAGTTTTGC                                                                                              >  SRR4302543.5455252/1‑94 (MQ=60)
  CTCCATCTGATAGAGATCGCCAGAGGTCTGTTTCAGCGCACCTACGCCAGGCAATGTAACAAGTGTGTTGATCTGATCCAGGGTCAGTTTTGCC                                                                                             <  SRR4302543.4560946/94‑1 (MQ=60)
  CTCCATCTGATAGAGATCGCCAGAGGTCTGTTTCAGCGCACCTACGCCAGGCAATGTAACAAGTGTGTTGATCTGATCCAGGGTCAGTTTTGCC                                                                                             >  SRR4302543.4666802/1‑94 (MQ=60)
  CTCCATCTGATAGAGATCGCCAGAGGTCTGTTTCAGCGCACCTACGCCAGGCAATGTAACAAGTGTGTTGATCTGATCCAGGGTCAGTTTTGCC                                                                                             <  SRR4302543.1980787/94‑1 (MQ=60)
    CCATCTGATAGAGATCGCCAGAGGTCTGTTTCAGCGCACCTACGCCAGGCAATGTAACAAGTGTGTTGATCTGATCCAGGGTCAGTTTTGCCCC                                                                                           >  SRR4302543.2904471/1‑94 (MQ=60)
    CCATCTGATAGAGATCGCCAGAGGTCTGTTTCAGCGCACCTACGCCAGGCAATGTAACAAGTGTGTTGATCTGATCCAGGGTCAGTTTTGCCCC                                                                                           >  SRR4302543.4815676/1‑94 (MQ=60)
    CCATCTGATAGAGATCGCCAGAGGTCTGTTTCAGCGCACCTACGCCAGGCAATGTAACAAGTGTGTTGATCTGATCCAGGGTCAGTTTTGCCCC                                                                                           >  SRR4302543.364891/1‑94 (MQ=60)
      ATCTGATAGAGATCGCCAGAGGTCTGTTTCAGCGCACCTACGCCAGGCAATGTAACAAGTGTGTTGATCTGATCCAGGGTCAGTTTTGCCCCAC                                                                                         <  SRR4302543.3800273/94‑1 (MQ=60)
      ATCTGATAGAGATCGCCAGAGGTCTGTTTCAGCGCACCTACGCCAGGCAATGTAACAAGTGTGTTGATCTGATCCAGGGTCAGTTTTGCCCCAC                                                                                         >  SRR4302543.2811609/1‑94 (MQ=60)
      ATCTGATAGAGATCGCCAGAGGTCTGTTTCAGCGCACCTACGCCAGGCAATGTAACAAGTGTGTTGATCTGATCCAGGGTCAGTTTTGCCCCAC                                                                                         >  SRR4302543.4566864/1‑94 (MQ=60)
       TCTGATAGAGATCGCCAGAGGTCTGTTTCAGCGCACCTACGCCAGGCAATGTAACAAGTGTGTTGATCTGATCCAGGGTCAGTTTTGCCCCACT                                                                                        <  SRR4302543.7550753/94‑1 (MQ=60)
        CTGATAGAGATCGCCAGAGGTCTGTTTCAGCGCACCTACGCCAGGCAATGTAACAAGTGTGTTGATCTGATCCAGGGTCAGTTTTGCCCCACTC                                                                                       >  SRR4302543.665845/1‑94 (MQ=60)
         TGATAGAGATCGCCAGAGGTCTGTTTCAGCGCACCTACGCCAGGCAATGTAACAAGTGTGTTGATCTGATCCAGGGTCAGTTTTGCCCCACTCA                                                                                      <  SRR4302543.7961584/94‑1 (MQ=60)
         TGATAGAGATCGCCAGAGGTCTGTTTCAGCGCACCTACGCCAGGCAATGTAACAAGTGTGTTGATCTGATCCAGGGTCAGTTTTGCCCCACTCA                                                                                      >  SRR4302543.287381/1‑94 (MQ=60)
         TGATAGAGATCGCCAGAGGTCTGTTTCAGCGCACCTACGCCAGGCAATGTAACAAGTGTGTTGATCTGATCCAGGGTCAGTTTTGCCCCACTCA                                                                                      >  SRR4302543.6478447/1‑94 (MQ=60)
          GATAGAGATCGCCAGAGGTCTGTTTCAGCGCACCTACGCCAGGCAATGTAACAAGTGTGTTGATCTGATCCAGGGTCAGTTTTGCCCCACTCAG                                                                                     >  SRR4302543.5893347/1‑94 (MQ=60)
          GATAGAGATCGCCAGAGGTCTGTTTCAGCGCACCTACGCCAGGCAATGTAACAAGTGTGTTGATCTGATCCAGGGTCAGTTTTGCCCCACTCAG                                                                                     <  SRR4302543.2619635/94‑1 (MQ=60)
          GATAGAGATCGCCAGAGGTCTGTTTCAGCGCACCTACGCCAGGCAATGTAACAAGTGTGTTGATCTGATCCAGGGTCAGTTTTGCCCCACTCAG                                                                                     >  SRR4302543.4125679/1‑94 (MQ=60)
          GATAGAGATCGCCAGAGGTCTGTTTCAGCGCACCTACGCCAGGCAATGTAACAAGTGTGTTGATCTGATCCAGGGTCAGTTTTGCCCCACTCAG                                                                                     >  SRR4302543.7752021/1‑94 (MQ=60)
          GATAGAGATCGCCAGAGGTCTGTTTCAGCGCACCTACGCCAGGCAATGTAACAAGTGTGTTGATCTGATCCAGGGTCAGTTTTGCCCCACTCAG                                                                                     >  SRR4302543.71065/1‑94 (MQ=60)
          GATAGAGATCGCCAGAGGTCTGTTTCAGCGCACCTACGCCAGGCAATGTAACAAGTGTGTTGATCTGATCCAGGGTCAGTTTTGCCCCACTCAG                                                                                     <  SRR4302543.7235471/94‑1 (MQ=60)
          GATAGAGATCGCCAGAGGTCTGTTTCAGCGCACCTACGCCAGGCAATGTAACAAGTGTGTTGATCTGATCCAGGGTCAGTTTTGCCCCACTCAG                                                                                     <  SRR4302543.7409322/94‑1 (MQ=60)
           ATAGAGATCGCCAGAGGTCTGTTTCAGCGCACCTACGCCAGGCAATGTAACAAGTGTGTTGATCTGATCCAGGGTCAGTTTTGCCCCACTCAGG                                                                                    >  SRR4302543.4254491/1‑94 (MQ=60)
           ATAGAGATCGCCAGAGGTCTGTTTCAGCGCACCTACGCCAGGCAATGTAACAAGTGTGTTGATCTGATCCAGGGTCAGTTTTGCCCCACTCAGG                                                                                    <  SRR4302543.1444721/94‑1 (MQ=60)
           ATAGAGATCGCCAGAGGTCTGTTTCAGCGCACCTACGCCAGGCAATGTAACAAGTGTGTTGATCTGATCCAGGGTCAGTTTTGCCCCACTCAGG                                                                                    >  SRR4302543.4454406/1‑94 (MQ=60)
              GAGATCGCCAGAGGTCTGTTTCAGCGCACCTACGCCAGGCAATGTAACAAGTGTTTTGATCTGATCCAGGGTCAGTTTTGCCCCACTCAGGGCT                                                                                 <  SRR4302543.6180939/94‑1 (MQ=60)
              GAGATCGCCAGAGGTCTGTTTCAGCGCACCTACGCCAGGCAATGTAACAAGTGTTTTGATCTGATCCAGGGTCAGTTTTGCCCCACTCAGGGCT                                                                                 <  SRR4302543.6181166/94‑1 (MQ=60)
              GAGATCGCCAGAGGTCTGTTTCAGCGCACCTACGCCAGGCAATGTAACAAGTGTGTTGATCTGATCCAGGGTCAGTTTTGCCCCACTCAGGGCT                                                                                 <  SRR4302543.5906208/94‑1 (MQ=60)
              GAGATCGCCAGAGGTCTGTTTCAGCGAACCTACGCCAGGCAATGTAACAAGTGTGTTGATCTGATCCAGGGTCAGTTTTGCCCCACTCAGGGCT                                                                                 <  SRR4302543.7035050/94‑1 (MQ=60)
               AGATCGCCAGAGGTCTGTTTCAGCGCACCTACGCCAGGCAATGTAACAAGTGTGTTGATCTGATCCAGGGTCAGTTTTGCCCCACTCAGGGCTG                                                                                >  SRR4302543.6060737/1‑94 (MQ=60)
               AGATCGCCAGAGGTCTGTTTCAGCGCACCTACGCCAGGCAATGTAACAAGTGTGTTGATCTGATCCAGGGTCAGTTTTGCCCCACTCAGGGCTG                                                                                <  SRR4302543.7923875/94‑1 (MQ=60)
               AGATCGCCAGAGGTCTGTTTCAGCGCACCTACGCCAGGCAATGTAACAAGTGTGTTGATCTGATCCAGGGTCAGTTTTGCCCCACTCAGGGCTG                                                                                >  SRR4302543.6873233/1‑94 (MQ=60)
                GATCGCCAGAGGTCTGTTTCAGCGCACCTACGCCAGGCAATGTAACAAGTGTGTTGATCTGATCCAGGGTCAGTTTTGCCCCACTCAGGGCTGG                                                                               >  SRR4302543.3217268/1‑94 (MQ=60)
                   CGCCAGAGGTCTGTTTCAGCGCACCTACGCCAGGCAATGTAACAAGTGTGTTGATCTGATCCAGGGTCAGTTTTGCCCCACTCAGGGCTGGAAT                                                                            >  SRR4302543.4357350/1‑94 (MQ=60)
                   CGCCAGAGGTCTGTTTCAGCGCACCTACGCCAGGCAATGTAACAAGTGTGTTGATCTGATCCAAGGTCAGTTTTGCCCCACTCAGGGCTGGAAT                                                                            <  SRR4302543.5226764/94‑1 (MQ=60)
                    GCCAGAGGTCTGTTTCAGCGCACCTACGCCAGGCAATGTAACAAGTGTGTTGATCTGATCCAGGGTCAGTTTTGCCCCACTCAGGGCTGGAATG                                                                           >  SRR4302543.3889111/1‑94 (MQ=60)
                    GCCAGAGGTCTGTTTCAGCGCACCTACGCCAGGCAATGTAACAAGTGTGTTGATCTGATCCAGGGTCAGTTTTGCCCCACTCAGGGCTGGAATG                                                                           <  SRR4302543.3857778/94‑1 (MQ=60)
                      CAGAGGTCTGTTTCAGCGCACCTACGCCAGGCAATGTAACAAGTGTGTTGATCTGATCCAGGGTCAGTTTTGCCCCACTCAGGGCTGGAATGTT                                                                         <  SRR4302543.4699036/94‑1 (MQ=60)
                      CAGAGGTCTGTTTCAGCGCACCTACGCCAGGCAATGTAACAAGTGTGTTGATCTGATCCAGGGTCAGTTTTGCCCCACTCAGGGCTGGAATGTT                                                                         >  SRR4302543.7677719/1‑94 (MQ=60)
                      CAGAGGTCTGTTTCAGCGCACCTACGCCAGGCAATGTAACAAGTGTGTTGATCTGATCCAGGGTCAGTTTTGCCCCACTCAGGGCTGGAATGTT                                                                         >  SRR4302543.5527497/1‑94 (MQ=60)
                      CAGAGGTCTGTTTCAGCGCACCTACGCCAGGCAATGTAACAAGTGTGTTGATCTGATCCAGGGTCAGTTTTGCCCCACTCAGGGCTGGAATGTT                                                                         <  SRR4302543.5545296/94‑1 (MQ=60)
                      CAGAGGTCTGTTTCAGCGCACCTACGCCAGGCAATGTAACAAGTGTGTTGATCTGATCCAGGGTCAGTTTTGCCCCACTCAGGGCTGGAATGTT                                                                         >  SRR4302543.1880049/1‑94 (MQ=60)
                      CAGAGGTCTGTTTCAGCGCACCTACGCCAGGCAATGTAACAAGTGTGTTGATCTGATCCAGGGTCAGTTTTGCCCCACTCAGGGCTGGAATGTT                                                                         >  SRR4302543.7238133/1‑94 (MQ=60)
                       AGAGGTCTGTTTCAGCGCACCTACGCCAGGCAATGTAACAAGTGTGTTGATCTGATCCAGGGTCAGTTTTGCCCCACTCAGGGCTGGAATGTTG                                                                        >  SRR4302543.3801428/1‑94 (MQ=60)
                        GAGGTCTGTTTCAGCGCACCTACGCCAGGCAATGTAACAAGTGTGTTGATCTGATCCAGGGTCAGTTTTGCCCCACTCAGGGCTGGAATGTTGT                                                                       >  SRR4302543.7656449/1‑94 (MQ=60)
                         AGGTCTGTTTCAGCGCACCTACGCCAGGCAATGTAACAAGTGTGTTGATCTGATCCAGGGTCAGTTTTGCCCCACTCAGGGCTGGAATGTTGTA                                                                      <  SRR4302543.2627614/94‑1 (MQ=60)
                          GGTCTGTTTCAGCGCACCTACGCCAGGCAATGTAACAAGTGTGTTGATCTGATCCAGGGTCAGTTTTGCCCCACTCAGGGCTGGAATGTTGTAC                                                                     <  SRR4302543.180821/94‑1 (MQ=60)
                           GTCTGTTTCAGCGCACCTACGCCAGGCAATGTAGCAAGTGTGTTGATCTGATCCAGGGTCAGTTTTGCCCCACTCAGGGCTGGAATGTTGTACA                                                                    >  SRR4302543.4368691/1‑94 (MQ=60)
                           GTCTGTTTCAGCGCACCTACGCCAGGCAATGTAACAAGTGTGTTGATCTGATCCAGGGTCAGTTTTGCCCCACTCAGGGCTGGAATGTTGTACA                                                                    >  SRR4302543.3931890/1‑94 (MQ=60)
                           GTCTGTTTCAGCGCACCTACGCCAGGCAATGTAACAAGTGTGTTGATCTGATCCAGGGTCAGTTTTGCCCCACTCAGGGCTGGAATGTTGTACA                                                                    <  SRR4302543.5728887/94‑1 (MQ=60)
                           GTCTGTTTCAGCGCACCTACGCCAGGCAATGTAACAAGTGTGTTGATCTGATCCAGGGTCAGTTTTGCCCCACTCAGGGCTGGAATGTTGTACA                                                                    >  SRR4302543.895387/1‑94 (MQ=60)
                            TCTGTTTCAGCGCACCTACGCCAGGCAATGTAACAAGTGTGTTGATCTGATCCAGGGTCAGTTTTGCCCCACTCAGGGCTGGAATGTTGTACAC                                                                   >  SRR4302543.5516610/1‑94 (MQ=60)
                            TCTGTTTCAGCGCACCTACGCCAGGCAATGTAACAAGTGTGTTGATCTGATCCAGGGTCAGTTTTGCCCCACTCAGGGCTGGAATGTTGTACAC                                                                   <  SRR4302543.6035059/94‑1 (MQ=60)
                            TCTGTTTCAGCGCACCTACGCCAGGCAATGTAACAAGTGTGTTGATCTGATCCAGGGTCAGTTTTGCCCCACTCAGGGCTGGAATGTTGTACAC                                                                   <  SRR4302543.7298269/94‑1 (MQ=60)
                             CTGTTTCAGCGCACCTACGCCAGGCAATGTAACAAGTGTGTTGATCTGATCCAGGGTCAGTTTTGCCCCACTCAGGGCTGGAATGTTGTACACC                                                                  >  SRR4302543.6675259/1‑94 (MQ=60)
                             CTGTTTCAGCGCACCTACGCCAGGCAATGTAACAAGTGTGTTGATCTGATCCAGGGTCAGTTTTGCCCCACTCAGGGCTGGAATGTTGTACACC                                                                  >  SRR4302543.6675262/1‑94 (MQ=60)
                             CTGTTTCAGCGCACCTACGCCAGGCAATGTAACAAGTGTGTTGATCTGATCCAGGGTCAGTTTTGCCCCACTCAGGGCTGGAATGTTGTACACC                                                                  >  SRR4302543.1515826/1‑94 (MQ=60)
                               GTTTCAGCGCACCTACGCCAGGCAATGTAACAAGTGTGTTGATCTGATCCAGGGTCAGTTTTGCCCCACTCAGGGCTGGAATGTTGTACACCAC                                                                >  SRR4302543.4379880/1‑94 (MQ=60)
                               GTTTCAGCGCACCTACGCCAGGCAATGTAACAAGTGTGTTGATCTGATCCAGGGTCAGTTTTGCCCCACTCAGGGCTGGAATGTTGTACACCAC                                                                >  SRR4302543.2143476/1‑94 (MQ=60)
                               GTTTCAGCGCACCTACGCCAGGCAATGTAACAAGTGTGTTGATCTGATCCAGGGTCAGTTTTGCCCCACTCAGGGCTGGAATGTTGTACACCAC                                                                >  SRR4302543.3787608/1‑94 (MQ=60)
                               GTTTCAGCGCACCTACGCCAGGCAATGTAACAAGTGTGTTGATCTGATCCAGGGTCAGTTTTGCCCCACTCAGGGCTGGAATGTTGTACACCAC                                                                >  SRR4302543.3787607/1‑94 (MQ=60)
                                 TTCAGCGCACCTACGCCAGGCAATGTAACAAGTGTGTTGATCTGATCCAGGGTCAGTTTTGCCCCACTCAGGGCTGGAATGTTGTACACCACCA                                                              <  SRR4302543.7339711/94‑1 (MQ=60)
                                  TCAGCGCACCTACGCCAGGCAATGTAACAAGTGTGTTGATCTGATCCAGGGTCAGTTTTGCCCCACTCAGGGCTGGAATGTTGTACACCACCAT                                                             <  SRR4302543.5020685/94‑1 (MQ=60)
                                   CAGCGCACCTACGCCAGGCAATGTAACAAGTGTGTTGATCTGATCCAGGGTCAGTTTTGCCCCACTCAGGGCTGGAATGTTGTACACCACCATC                                                            <  SRR4302543.3128754/94‑1 (MQ=60)
                                    AGCGCACCTACGCCAGGCAATGTAACAAGTGTGTTGATCTGATCCAGGGTCAGTTTTGCCCCACTCAGGGCTGGTATGTTGTACACCACCATCG                                                           <  SRR4302543.6312901/94‑1 (MQ=60)
                                    AGCGCACCTACGCCAGGCAATGTAACAAGTGTGTTGATCTGATCCAGGGTCAGTTTTGCCCCACTCAGGGCTGGAATGTTGTACACCACCATCG                                                           >  SRR4302543.6931778/1‑94 (MQ=60)
                                     GCGCACCTACGCCAGGCAATGTAACAAGTGTGTTGATCTGATCCAGGGTCAGTTTTGCCCCACTCAGGGCTGGAATGTTGTACACCACCATCGG                                                          <  SRR4302543.3523752/94‑1 (MQ=60)
                                      CGCACCTACGCCAGGCAATGTAACAAGTGTGTTGATCTGATCCAGGGTCAGTTTTGCCCCACTCAGGGCTGGAATGTTGTACACCACCATCGGC                                                         <  SRR4302543.3690836/94‑1 (MQ=60)
                                       GCACCTACGCCAGGCAATGTAACAAGTGTGTTGATCTGATCCAGGGTCAGTTTTGCCCCACTCAGGGCTGGAATGTTGTACACCACCATCGGCA                                                        >  SRR4302543.1373038/1‑94 (MQ=60)
                                       GCACCTACGCCAGGCAATGTAACAAGTGTGTTGATCTGATCCAGGGTCAGTTTTGCCCCACTCAGGGCTGGAATGTTGTACACCACCATCGGCA                                                        >  SRR4302543.4337783/1‑94 (MQ=60)
                                       GCACCTACGCCAGGCAATGTAACAAGTGTGTTGATCTGATCCAGGGTCAGTTTTGCCCCACTCAGGGCTGGAATGTTGTACACCACCATCGCCA                                                        >  SRR4302543.1373037/1‑94 (MQ=60)
                                        CACCTACGCCAGGCAATGTAACAAGTGTGTTGATCTGATCCAGGGTCAGTTTTGCCCCACTCAGGGCTGGAATGTTGTACACCACCATCGGCAA                                                       >  SRR4302543.3277186/1‑94 (MQ=60)
                                          CCTACGCCAGGCAATGTAACAAGTGTGTTGATCTGATCCGGGGTCAGTTTTGCCCCACTCAGGGCTGGAATGTTGTACACCACCATCGGCAAAC                                                     <  SRR4302543.3532917/94‑1 (MQ=60)
                                           CTACGCCAGGCAATGTAACAAGTGTGTTGATCTGATCCAGGGTCAGTTTTGCCCCACTCAGGGCTGGAATGTTGTACACCACCATCGGCAAACC                                                    >  SRR4302543.3800282/1‑94 (MQ=60)
                                           CTACGCCAGGCAATGTAACAAGTGTGTTGATCTGATCCAGGGTCAGTTTTGCCCCACTCAGGGCTGGAATGTTGTACACCACCATCGGCAAACC                                                    >  SRR4302543.3790774/1‑94 (MQ=60)
                                            TACGCCAGGCAATGTAACAAGTGTGTTGATCTGATCCAGGGTCAGTTTTGCCCCACTCAGGGCTGGAATGTTGTACACCACCATCGGCAAACCA                                                   <  SRR4302543.7786990/94‑1 (MQ=60)
                                             ACGCCAGGCAATGTAACAAGTGTGTTGATCTGATCCAGGGTCAGTTTTGCCCCACTCAGGGCTGGAATGTTGTACACCACCATCGGCAAACCAT                                                  <  SRR4302543.3598006/94‑1 (MQ=60)
                                               GCCAGGCAATGTAACAAGTGTGTTGATCTGATCCAGGGTCAGTTTTGCCCCACTCAGGGCTGGAATGTTGTACACCACCATCGGCAAACCATCC                                                <  SRR4302543.5397441/94‑1 (MQ=60)
                                                CCAGGCAATGTAACAAGTGTGTTGATCTGATCCAGGGTCAGTTTTGCCCCACTCAGGGCTGGAATGTTGTACACCACCATCGGCAAACCATCCG                                               >  SRR4302543.636253/1‑94 (MQ=60)
                                                CCAGGCAATGTAACAAGTGTGTTGATCTGATCCAGGGTCAGTTTTGCCCCACTCAGGGCTGGAATGTTGTACACCACCATCGGCAAACCATCCG                                               <  SRR4302543.5561159/94‑1 (MQ=60)
                                                CCAGGCAATGTAACAAGTGTGTTGATCTGATCCAGGGTCAGTTTTGCCCCACTCAGGGCTGGAATGTTGTACACCACCATCGGCAAACCATCCG                                               <  SRR4302543.2170092/94‑1 (MQ=60)
                                                CCAGGCAATGTAACAAGTGTGTTGATCTGATCCAGGGTCAGTTTTGCCCCACTCAGGGCTGGAATGTTGTACACCACCATCGGCAAACCATCCG                                               >  SRR4302543.2661573/1‑94 (MQ=60)
                                                CCAGGCAATGTAACAAGTGTGTTGATCTGATCCAGGGTCAGTTTTGCCCCACTCAGGGCTGGAATGTTGTACACCACCATCGGCAAACCATCCG                                               >  SRR4302543.5670073/1‑94 (MQ=60)
                                                 CAGGCAATGTAACAAGTGTGTTGATCTGATCCAGGGTCAGTTTTGCCCCACTCAGGGCTGGAATGTTGTACACCACCATCGGCAAACCATCCGC                                              <  SRR4302543.6040402/94‑1 (MQ=60)
                                                 CAGGCAATGTAACAAGTGTGTTGATCTGATCCAGGGTCAGTTTTGCCCCACTCAGGGCTGGAATGTTGTACACCACCATCGGCAAACCATCCGC                                              >  SRR4302543.3151926/1‑94 (MQ=60)
                                                  AGGCAATGTAACAAGTGTGTTGATCTGATCCAGGGTCAGTTTTGCCCCACTCAGGGCTGGAATGTTGTACACCACCATCGGCAAACCATCCGCC                                             >  SRR4302543.1698678/1‑94 (MQ=60)
                                                  AGGCAATGTAACAAGTGTGTTGATCTGATCCAGGGTCAGTTTTGCCCCACTCAGGGCTGGAATGTTGTACACCACCATCGGCAAACCATCCGCC                                             <  SRR4302543.507506/94‑1 (MQ=60)
                                                  AGGCAATGTAACAAGTGTGTTGATCTGATCCAGGGTCAGTTTTGCCCCACTCAGGGCTGGAATGTTGTACACCACCATCGGCAAACCATCCGCC                                             >  SRR4302543.6068877/1‑94 (MQ=60)
                                                  AGGCAATGTAACAAGTGTGTTGATCTGATCCAGGGTCAGTTTTGCCCCACTCAGGGCTGGAATGTTGTACACCACCATCGGCAAACCATCCGCC                                             <  SRR4302543.4624366/94‑1 (MQ=60)
                                                   GGCAATGTAACAAGTGTGTTGATCTGATCCAGGGTCAGTTTTGCCCCACTCAGGGCTGGAATGTTGTACACCACCATCGGCAACCCATCCGCCG                                            >  SRR4302543.538996/1‑94 (MQ=60)
                                                   GGCAATGTAACAAGTGTGTTGATCTGATCCAGGGTCAGTTTTGCCCCACTCAGGGCTGGAATGTTGTACACCACCATCGGCAAACCATCCGCCG                                            <  SRR4302543.4012879/94‑1 (MQ=60)
                                                   GGCAATGTAACAAGTGTGTTGATCTGATCCAGGGTCAGTTTTGCCCCACTCAGGGCTGGAATGTTGTACACCACCATCGGCAAACCATCCGCCG                                            <  SRR4302543.378676/94‑1 (MQ=60)
                                                   GGCAATGTAACAAGTGTGTTGATCTGATCCAGGGTCAGTTTTGCCCCACTCAGGGCTGGAATGTTGTACACCACCATCGGCAAACCATCCGCCG                                            >  SRR4302543.775735/1‑94 (MQ=60)
                                                   GGCAATGTAACAAGTGTGTTGATCTGATCCAGGGTCAGTTTTGCCCCACTCAGGGCTGGAATGTTGTACACCACCATCGGCAAACCATCCGCCG                                            >  SRR4302543.2146202/1‑94 (MQ=60)
                                                   GGCAATGTAACAAGTGTGTTGATCTGATCCAGGGTCAGTTTTGCCCCACTCAGGGCTGGAATGTTGTACACCACCATCGGCAAACCATCCGCCG                                            <  SRR4302543.1485224/94‑1 (MQ=60)
                                                   GGCAATGTAACAAGTGTGTTGATCTGATCCAGGGTCAGTTTTGCCCCACTCAGGGCTGGAATGTTGTACACCACCATCGGCAAACCATCCGCCG                                            <  SRR4302543.3897762/94‑1 (MQ=60)
                                                    GCAATGTAACAAGTGTGTTGATCTGATCCAGGGTCAGTTTTGCCCCGCTCAGGGCTGGAATGTTGTACACCACCATCGGCAAACCATCCGCCGA                                           <  SRR4302543.161922/94‑1 (MQ=60)
                                                    GCAATGTAACAAGTGTGTTGATCTGATCCAGGGTCAGTTTTGCCCCACTCAGGGCTGGAATGTTGTACACCACCATCGGCAAACCATCCGCCGA                                           >  SRR4302543.246283/1‑94 (MQ=60)
                                                    GCAATGTAACAAGTGTGTTGATCTGATCCAGGGTCAGTTTTGCCCCACTCAGGGCTGGAATGTTGTACACCACCATCGGCAAACCATCCGCCGA                                           >  SRR4302543.487498/1‑94 (MQ=60)
                                                      AATGTAACAAGTGTGTTGATCTGATCCAGGGTCAGTTTTGCCCCACTCAGGGCTGGAATGTTGTACACCACCATCGGCAAACCATCCGCCGAAT                                         >  SRR4302543.7426971/1‑94 (MQ=60)
                                                      AATGTAACAAGTGTGTTGATCTGATCCAGGGTCAGTTTTGCCCCACTCAGGGCTGGAATGTTGTACACCACCATCGGCAAACCATCCGCCGAAT                                         >  SRR4302543.7223486/1‑94 (MQ=60)
                                                      AATGTAACAAGTGTGTTGATCTGATCCAGGGTCAGTTGTGCCCCACTCAGGGCTGGAATGTTGTACACCACCATCGGCAAACCATCCGCCGAAT                                         <  SRR4302543.4810502/94‑1 (MQ=60)
                                                       ATGTAACAAGTGTGTTGATCTGATCCAGGGTCAGTTTTGCCCCACTCAGGGCTGGAATGTTGTACACCACCATCGGCAAACCATCCGCCGAATC                                        >  SRR4302543.6116054/1‑94 (MQ=60)
                                                        agtaacaacggggttgattgGATCCAGGGTCAGTTGTGCCCCACTCAGGGCTGGAATGTTGTACACCACCATCGGCAAACCATCCGCCGAATCA                                       <  SRR4302543.2284213/74‑1 (MQ=60)
                                                         GTAACAAGTGTGTTGATCTGATCCAGGGTCAGTTTTGCCCCACTCAGGGCTGGAATGTTGTACACCACCATCGGCAAACCATCCGCCGAATCAA                                      >  SRR4302543.7477168/1‑94 (MQ=60)
                                                         GTAACAAGTGTGTTGATCTGATCCAGGGTCAGTTTTGCCCCACTCAGGGCTGGAATGTTGTACACCACCATCGGCAAACCATCCGCCGAATCAA                                      >  SRR4302543.264454/1‑94 (MQ=60)
                                                         GTAACAAGTGTGTTGATCTGATCCAGGGTCAGTTTTGCCCCACTCAGGGCTGGAATGTTGTACACCACCATCGGCAAACCATCCGCCGAATCAA                                      >  SRR4302543.6437057/1‑94 (MQ=60)
                                                          TAACAAGTGTGTTGATCTGATCCAGGGTCAGTTTTGCCCCACTCAGGGCTGGCATGTTGTACACCACCATCGGCAAACCATACGCCGAATCACT                                     >  SRR4302543.6980818/1‑94 (MQ=60)
                                                          TAACAAGTGTGTTGATCTGATCCAGGGTCAGTTTTGCCCCACTCAGGGCTGGAATGTTGTACACCACCATCGGCAAACCATCCGCCGAATCAAT                                     >  SRR4302543.6980819/1‑94 (MQ=60)
                                                          TAACAAGTCTGTTGATCTGATCCAGGGTCAGTTTTGCCCCACTCAGGGCTGGAATGTTGTACACCACCATCGGCAAACCATCCGCCGAATCAAT                                     <  SRR4302543.4384088/94‑1 (MQ=60)
                                                          GAACAAGTGTGTTGATCTGTTCCAGGGGCAGTTTTGCCCCACTCAGGGCTGGAATGTTGTACACCACCATCGGCAAACCATCCGCCGAATCAAT                                     <  SRR4302543.4384089/94‑1 (MQ=60)
                                                            ACAAGTGTGTTGATCTGATCCAGGGTCAGTTTTGCCCCACTCAGGGCTGGAATGTTGTACACCACCATCGGCAAACCATCCGCCGAATCAATAA                                   <  SRR4302543.5254993/94‑1 (MQ=60)
                                                            ACAAGTGTGTTGATCTGATCCAGGGTCAGTTTTGCCCCACTCAGGGCTGGAATGTTGTACACCACCATCGGCAAACCATCCGCCGAATCAATAA                                   >  SRR4302543.2468591/1‑94 (MQ=60)
                                                            ACAAGTGTGTTGATCTGATCCAGGGTCAGTTTTGCCCCACTCAGGGCTGGAATGTTGTACACCACCATCGGCAAACCATCCGCCGAATCAATAA                                   >  SRR4302543.73162/1‑94 (MQ=60)
                                                            ACAAGTGTGTTGATCTGATCCAGGGTCAGTTTTGCCCCACTCAGGGCTGGAATGTTGTACACCACCATCGGCAAACCATCCGCCGAATCAATAA                                   <  SRR4302543.6044080/94‑1 (MQ=60)
                                                            ACAAGTGTGGTGATCTGATCCAGGGTCAGTTTTGCCCCACTCAGGGCTGGGATGTTGTACACCACCATCGGCAAACCATCCGCCGAATCAATAA                                   <  SRR4302543.1634112/94‑1 (MQ=60)
                                                             CAAGTGTGTTGATCTGATCCAGGGTCCGTTTTGCCCCACTCAGGGCTGGAATGTTGTACACCACCATCGGCAAACCATCCGCCGAATCAATAAT                                  <  SRR4302543.479780/94‑1 (MQ=60)
                                                             CAAGTGTGTTGATCTGATCCAGGGTCAGTTTTGCCCCACTCAGGGCTGGAATGTTGTACACCACCATCGGCAAACCATCCGCCGAATCAATAAT                                  <  SRR4302543.7966944/94‑1 (MQ=60)
                                                             CAAGTGTGTTGATCTGATCCAGGGTCAGTTTTGCCCCACTCAGGGCTGGAATGTTGTACACCACCATCGGCAAACCATCCGCCGAATCAATAAT                                  >  SRR4302543.6578061/1‑94 (MQ=60)
                                                             CAAGTGTGTTGATCTGATCCAGGGTCAGTTTTGCCCCACTCAGGGCTGGAATGTTGTACACCACCATCGGCAAACCATCCGCCGAATCAATAAT                                  <  SRR4302543.6548348/94‑1 (MQ=60)
                                                             CAAGTGTGTTGATCTGATCCAGGGTCAGTTTTGCCCCACTCAGGGCTGGAATGTTGTACACCACCATCGGCAAACCATCCGCCGAATCAATAAT                                  <  SRR4302543.6713232/94‑1 (MQ=60)
                                                              AAGTGTGTTGATCTGATCCAGGGTCAGTTTTGCCCCACTCAGGGCTGGAATGTTGTACACCACCATCGGCAAACCATCCGCCGAATCAATAATT                                 >  SRR4302543.7169621/1‑94 (MQ=60)
                                                              AAGTGTGTTGATCTGATCCAGGGTCAGTTTTGCCCCACTCAGGGCTGGAATGTTGTACACCACCATCGGCAAACCATCCGCCGAATCAATAATT                                 <  SRR4302543.5671842/94‑1 (MQ=60)
                                                               AGTGTGTTGATCTGATCCAGGGTCAGTTTTGCCCCACTCAGGGCTGGAATGTTGTACACCACCATCGGCAAACCATCCGCCGAATCAATAATTG                                >  SRR4302543.1585760/1‑94 (MQ=60)
                                                               AGTGTGTTGATCTGATCCAGGGTCAGTTTTGCCCCACTCAGGGCTGGAATGTTGTACACCACCATCGGCAAACCATCCGCCGAATCAATAATTG                                >  SRR4302543.7591213/1‑94 (MQ=60)
                                                               AGTGTGTTGATCTGATCCAGGGTCAGTTTTGCCCCACTCAGGGCTGGAATGTTGTACACCACCATCGGCAAACCATCCGCCGAATCAATAATTG                                >  SRR4302543.4328970/1‑94 (MQ=60)
                                                               AGTGTGTTGATCTGATCCAGGGTCAGTTTTGCCCCACTCAGGGCTGGAATGTTGTACACCACCATCGGCAAACCATCCGCCGAATCAATAATTG                                >  SRR4302543.1585759/1‑94 (MQ=60)
                                                               AGTGTGTTGATCTGATCCAGGGTCAGTTTTGCCCCACTCAGGGCTGGAATGTTGTACACCACCATCGGCAAACCACCCGCCGAATCAATAATTG                                <  SRR4302543.2803834/94‑1 (MQ=60)
                                                               AGTGTGTTGATCTGATCCAGGGTCAGTTTTGCCCCACTCAGGGCTGGAATGTTGTACACCACCATCGGCAAACCACCCGCCGAATCAATAATTG                                >  SRR4302543.284033/1‑94 (MQ=60)
                                                                GTGTGTTGATCTGATCCAGGGTCAGTTTTGCCCCACTCAGGGCTGGAATGTTGTACACCACCATCGGCAAACCATCCGCCGAATCAATAATTGC                               <  SRR4302543.6859053/94‑1 (MQ=60)
                                                                GTGTGTTGATCTGATCCAGGGTCAGTTTTGCCCCACTCAGGGCTGGAATGTTGTACACCACCATCGGCAAACCATCCGCCGAATCAATAATTGC                               <  SRR4302543.6859056/94‑1 (MQ=60)
                                                                GTGTGTTGATCTGATCCAGGGTCAGTTTTGCCCCACTCAGGGCTGGAATGTTGTACACCACCATCGGCAAACCATCCGCCGAATCAATAATTGC                               >  SRR4302543.407248/1‑94 (MQ=60)
                                                                 TGTGTTGATCTGATCCAGGGTCAGTTTTGCCCCACTCAGGGCTGGAATGTTGTACACCACCATCGGCAAACCATCCGCCGAATCAATAATTTCC                              <  SRR4302543.7410045/94‑1 (MQ=60)
                                                                 TGTGTTGATCTGATCCAGGGTCAGTTTTGCCCCACTCAGGGCTGGAATGTTGTACACCACCATCGGCAAACCATCCGCCGAATCAATAATTGCC                              <  SRR4302543.6045483/94‑1 (MQ=60)
                                                                  GTGTTGATCTGATCCAGGGTCAGTTTTGCCCCACTCAGGGCTGGAATGTTGTACACCACCATCGGCAAACCATCCGCCGAATCAATAATTGCCC                             >  SRR4302543.6043952/1‑94 (MQ=60)
                                                                   TGTTGATCTGATCCAGGGTCAGTTTTGCCCCACTCAGGGCTGGAATGTTGTACACCACCATCGGCAAACCATCCGCCGAATCAATAATTGCCCG                            <  SRR4302543.3747849/94‑1 (MQ=60)
                                                                   TGTTGATCTGATCCAGGGTCAGTTTTGCCCCACTCAGGGCTGGAATGTTGTACACCACCATCGGCAAACCATCCGCCGAATCAATAATTGCCCG                            >  SRR4302543.1986056/1‑94 (MQ=60)
                                                                   TGTTGATCTGATCCAGGGTCAGTTTTGCCCCACTCAGGGCTGGAATGTTGTACACCACCATCGGCAAACCATCCGCCGAATCAATAATTGCCCG                            <  SRR4302543.2815812/94‑1 (MQ=60)
                                                                   TGTTGATCTGATCCAGGGTCAGTTTTGCCCCACTCAGGGCTGGAATGTTGTACACCACCATCGGCAAACCATCCGCCGAATCAATAATTGCCCG                            >  SRR4302543.7794150/1‑94 (MQ=60)
                                                                   TGTTGATCTGATCCAGGGTCAGTTTTGCCCCACTCAGGGCTGGAATGTTGTACACCACCATCGGCAAACCATCCGCCGAATCAATAATTGCCCG                            >  SRR4302543.7794151/1‑94 (MQ=60)
                                                                   TGTTGATCTGATCCAGGGTCAGTTTTGCCCCACTCAGGGCTGGAATGTTGTACACCACCATCGGCAAACCACCCGCCGAATCAATAATTCCCCG                            >  SRR4302543.1569341/1‑94 (MQ=60)
                                                                   TGTTGATCTGATCCAGGGTCAGTTTTGCCCCACTCAGGGCTGCAATGTTGTACACCACCATCGGCAAACCATCCGCCGAATCAATAATTGCCCG                            <  SRR4302543.2815810/94‑1 (MQ=60)
                                                                    GTTGATCTGATCCAGGGTCAGTTTTGCCCCACTCAGGGCTGGAATGTTGTACACCACCATCGGCAAACCATCCGCCGAATCAATAATTGCCCGA                           >  SRR4302543.1173677/1‑94 (MQ=60)
                                                                     TTGATCTGATCCAGGGTCAGTTTTGCCCCACTCAGGGCTGGAATGTTGTACACCACCATCGGCAAACCACCCGCCGAATCAATAATTGCCCGAT                          >  SRR4302543.7971836/1‑94 (MQ=60)
                                                                      TGATCTGATCCAGGGTCAGTTTTGCCCCACTCAGGGCTGGAATGTTGTACACCACCATCGGCAAACCATCCGCCGAATCAATAATTGCCCGATA                         >  SRR4302543.310233/1‑94 (MQ=60)
                                                                      TGATCTGATCCAGGGTCAGTTTTGCCCCACTCAGGGCTGGAATGTTGTACACCACCATCGGCAAACCATCCGCCGAATCAATAATTGCCCGATA                         >  SRR4302543.2074669/1‑94 (MQ=60)
                                                                      TGATCTGATCCAGGGTCAGTTTTGCCCCACTCAGGGCTGGAATGTTGTACACCACCATCGGCAAACCATCCGCCGAATCAATAATTGCCCGATA                         >  SRR4302543.5431439/1‑94 (MQ=60)
                                                                      TGATCTGATCCAGGGTCAGTTTTGCCCCACTCAGGGCTGGAATGTTGTACACCACCATCGGCAAACCATCCGCCGAATCAATAATTGCCCGATA                         >  SRR4302543.1857949/1‑94 (MQ=60)
                                                                       GATCTGATCCAGGGTCAGTTTTGCCCCACTCAGGGCTGGAATGTTGTACACCACCATCGGCAAACCATCCGCCGAATCAATAATTGCCCGATTG                        <  SRR4302543.5592920/94‑1 (MQ=60)
                                                                       GATCTGATCCAGGGTCAGTTTTGCCCCACTCAGGGCTGGAATGTTGTACACCACCATCGGCAAACCATCCGCCGAATCAATAATTGCCCGATAG                        <  SRR4302543.5798031/94‑1 (MQ=60)
                                                                       GATCTGATCCAGGGTCAGTTTTGCCCCACTCAGGGCTGGAATGTTGTACACCACCATCGGCAAACCATCCGCCGAATCAATAATTGCCCGATAG                        >  SRR4302543.5769516/1‑94 (MQ=60)
                                                                       GATCTGATCCAGGGTCAGTTTTGCCCCACTCAGGGCTGGAATGTTGTACACCACCATCGGCAAACCATCCGCCGAATCAATAATTGCCCGATAG                        <  SRR4302543.1461870/94‑1 (MQ=60)
                                                                       GATCTGATCCAGGGTCAGTTTTGCCCCACTCAGGGCTGGAATGTTGTACACCACCATCGGCAAACCATCCGCCGAATCAATAATTGCCCGATAG                        <  SRR4302543.6479368/94‑1 (MQ=60)
                                                                       GATCTGATCCAGGGTCAGTTTTGCCCCACTCAGGGCTGGAATGTTGTACACCACCATCGGCAAACCATCCGCCGAATCAATAATTGCCCGATAG                        <  SRR4302543.1828558/94‑1 (MQ=60)
                                                                        ATCTGATCCAGGGTCAGTTTTGCCCCACTCAGGGCTGGAATGTTGTACACCACCATCGGCAAACCATCCGCCGAATCAATAATTGCCCGATAGT                       >  SRR4302543.127396/1‑94 (MQ=60)
                                                                        ATCTGATCCAGGGTCAGTTTTGCCCCACTCAGGGCTGGAATGTTGTACACCACCATCGGCAAACCATCCGCCGAATCAATAATTGCCCGATAGT                       <  SRR4302543.5524527/94‑1 (MQ=60)
                                                                         TCTGATCCAGGGTCAGTTTTGCCCCACTCAGGGCTGGAATGTTGTACACCACCATCGGCAAACCATCCGCCGAATCAATAATTGCCCGATAGTG                      <  SRR4302543.6445638/94‑1 (MQ=60)
                                                                          CTGATCCAGGGTCAGTTTTGCCCCACTCAGGGCTGGAATGTTGTACACCACCATCGGCAAATCACCCGCCGAATCAATAATTGCCCCATAGTGA                     >  SRR4302543.4434449/1‑94 (MQ=60)
                                                                           TGATCCAGGGTCAGTTTTGCCCCACTCAGGGCTGGAATGTTGTACACCACCATCGGCAAACCATCCGCCGAATCAATAATTGCCCGATAGTGAT                    >  SRR4302543.1751105/1‑94 (MQ=60)
                                                                            GATCCAGGGTCAGTTTTGCCCCACTCAGGGCTGGAATGTTGTACACCACCATCGGCAAACCATCCGCCGAATCAATAATTGCCCGATAGTGATC                   >  SRR4302543.4085093/1‑94 (MQ=60)
                                                                            GATCCAGGGTCAGTTTTGCCCCACTCAGGGCTGGAATGTTGTACACCACCATCGGCAAACCATCCGCCGAATCAATAATTGCCCGATAGTGATC                   <  SRR4302543.509415/94‑1 (MQ=60)
                                                                            GATCCAGGGTCAGTTTTGCCCCACTCAGGGCTGGAATGTTGTACACCACCATCGGCAAACCATCCGCCGAATCAATAATTGCCCGATAGTGATC                   >  SRR4302543.1701483/1‑94 (MQ=60)
                                                                             GTCCAGGGTCAGTTTTGCCCCACTCAGGGCTGGAATGTTGTACACCACCATCGGCAAACCATCCGCCGAATCAATAATTGCCCGATAGTGATCG                  <  SRR4302543.7209060/94‑1 (MQ=60)
                                                                             ATCCAGGGTCAGTTTTGCCCCACTCAGGGCTGGAATGTTGTACACCACCATCGGCAAACCATCCGCCGAATCAATAATTGCCCGATAGTGATCG                  <  SRR4302543.5051596/94‑1 (MQ=60)
                                                                              TCCAGGGTCAGTTTTGCCCCACTCAGGGCTGGAATGTTGTACACCACCATCGGCAAACCATCCGCCGAATCAATAATTGCCCGATAGTGATCGC                 <  SRR4302543.4248751/94‑1 (MQ=60)
                                                                              TCCAGGGTCAGTTTTGCCCCACTCAGGACTGGAATGTTGTACACCACCATCGGCAAACCATCCGCCGAATCAATAATTGCCCGATAGTGATCGC                 <  SRR4302543.3588827/94‑1 (MQ=60)
                                                                               CCAGGGTCAGTTTTGCCCCACTCAGGGCTGGAATGTTGTACACCACCATCGGCAAACCATCCGCCGAATCAATAATTGCCCGATAGTGATCGCA                >  SRR4302543.3034806/1‑94 (MQ=60)
                                                                               CCAGGGTCAGTTTTGCCCCACTCAGGGCTGGAATGTTGTACACCACCATCGGCAAACCATCCGCCGAATCAATAATTGCCCGATAGTGATCGCA                <  SRR4302543.7938276/94‑1 (MQ=60)
                                                                               CCAGGGTCAGTTTTGCCCCACTCAGGGCTGGAATGTTGTACACCACCATCGGCAAACCATCCGCCGAATCAATAATTGCCCGATAGTGATCGCA                >  SRR4302543.3826499/1‑94 (MQ=60)
                                                                                 AGGGTCAGTTTTGCCCCACTCAGGGCTGGAATGTTGTACACCACCATCGGCAAACCATCCGCCGAATCAATAATTGCCCGATAGTGATCGCAGT              <  SRR4302543.5451555/94‑1 (MQ=60)
                                                                                 AGGGTCAGTTTTGCCCCACTCAGGGCTGGAATGTTGTACACCACCATCGGCAAACCATCCGCCGAATCAATAATTGCCCGATAGTGATCGCAGT              <  SRR4302543.1236177/94‑1 (MQ=60)
                                                                                  GGGTCAGTTTTGCCCCACTCAGGGCTGGAATGTTGTACACCACCATCGGCAAACCATCCGCCGAATCAATAATTGCCCGATAGTGATCGCAGTG             >  SRR4302543.7650798/1‑94 (MQ=60)
                                                                                  GGGTCAGTTTTGCCCCACTCAGGGCTGGAATGTTGTACACCACCATCGGCAAACCATCCGCCGAATCAATAATTGCCCGATAGTGATCGCAGTG             >  SRR4302543.4949675/1‑94 (MQ=60)
                                                                                  GGGTCAGTTTTGCCCCACTCAGGGCTGGAATGTTGTACACCACCATCGGCAAACCATCCGCCGAATCAATAATTGCCCGATAGTGATCGCAGTG             >  SRR4302543.6594482/1‑94 (MQ=60)
                                                                                  GGGTCAGTTTTGCCCCACTCAGGGCTGGAATGTTGTACACCACCATCGGCAAACCATCCGCCGAATCAATAATTGCCCGATAGTGATCGCAGTG             <  SRR4302543.4450595/94‑1 (MQ=60)
                                                                                   GGTCAGTTTTGCCCCACTCAGGGCTGGAATGTTGTACACCACCATCGGCAAACCATCCGCCGAATCAATAATTGCCCGATAGTGATCGCAGTGT            >  SRR4302543.5610280/1‑94 (MQ=60)
                                                                                   GGTCAGTTTTGCCCCACTCAGGGCTGGAATGTTGTACACCACCATCGGCAAACCATCCGCCGAATCAATAATTGCCCGATAGTGATCGCAGTGT            <  SRR4302543.6731328/94‑1 (MQ=60)
                                                                                   GGTCAGTTTTGCCCCACTCAGGGCTGGAATGTTGTACACCACCATCGGCAAACCATCCGCCGAATCAATAATTGCCCGATAGTGATCGCAGTGT            >  SRR4302543.6898727/1‑94 (MQ=60)
                                                                                    GTCAGTTTTGCCCCACTCAGGGCTGGAATGTTGTACACCACCATCGGCAAACCATCCGCCGAATCAATAATTGCCCGATAGTGATCGCAGTGTT           >  SRR4302543.198407/1‑94 (MQ=60)
                                                                                     TCAGTTTTGCCCCACTCAGGGCTGGAATGTTGTACACCACCATCGGCAAACCACCCGCCGAATCAATAATTGCCCGATAGTGATCGCAGTGTTC          >  SRR4302543.3090155/1‑94 (MQ=60)
                                                                                     GCAGTTTTGCCCCACTCAGGGCTGGAATGTTGTACACCACCATCGGCAAACCATCCGCCGAATCAATAATTGCCCGATAGTGATCGCAGTGTTC          <  SRR4302543.2326969/94‑1 (MQ=60)
                                                                                       AGTTTTGCCCCACTCAGGGCTGGAATGTTGTACATCACCATCGGCAAACCATCCGCCGAATCAATAATTGCCCGATAGTGATCGCAGTGTTCTT        >  SRR4302543.7446689/1‑94 (MQ=60)
                                                                                       AGTTTTGCCCCACTCAGGGCTGGAATGTTGTACACCACCATCGGCAAACCATCCGCCGAATCAATAATTGCCCGATAGTGATCGCAGTGTTCTT        >  SRR4302543.5612096/1‑94 (MQ=60)
                                                                                        GTTTTGCCCCACTCAGGGCTGGAATGTTGTACACCACCATCGNCAAACCATCCGCCGAATCAATAATTGCCNNATAGTGATCGCNGNNTNCNTN       >  SRR4302543.4830241/1‑94 (MQ=60)
                                                                                        GTTTTGCCCCACTCAGGGCTGGAATGTTGTACACCACCATCGGCAAACCATCCGCCGAATCAATAATTGCCCGATAGTGATCGCAGTGTTCTTC       >  SRR4302543.1775424/1‑94 (MQ=60)
                                                                                         TTTTGCCCCACTCAGGGCTGGAATGTTGTACACCACCATCGGCAAACCATCCGCCGAATCAATAATTGCCCGATAGTGATCGCAGTGTTCTTCA      >  SRR4302543.3117183/1‑94 (MQ=60)
                                                                                         TTTTGCCCCACTCAGGGCTGGAATGTTGTACACCACCATCGGCAAACCATCCGCCGAATCAATAATTGCCCGATAGTGATCGCAGTGTTCTTCA      >  SRR4302543.2720826/1‑94 (MQ=60)
                                                                                         TTTTGCCCCACTCAGGGCTGGAATGTTGTACACCACCATCGGCAAACCATCCGCCGAATCAATAATTGCCCGATAGTGATCGCAGTGTTCTTCA      <  SRR4302543.7175376/94‑1 (MQ=60)
                                                                                           TTGCCCCACTCAGGGCTGGAATGTTGTACACCACCATCGGCAAACCATCCGCCGAATCAATAATTGCCCGATAGTGATCGCAGTGTTCTTCAAA    <  SRR4302543.2949053/94‑1 (MQ=60)
                                                                                            TGCCCCACTCAGGGCTGGAATGTTGTACACCACCATCGGCAAACCATCCGCCGAATCAATAATTGCCCGATAGTGATCGCAGTGTTCTTCAAAG   >  SRR4302543.2250600/1‑94 (MQ=60)
                                                                                            TGCCCCACTCAGGGCTGGAATGTTGTACACCACCATCGGCAAACCATCCGCCGAATCAATAATTGCCCGATAGTGATCGCAGTGTTCTTCAAAG   >  SRR4302543.5084732/1‑94 (MQ=60)
                                                                                            TGCCCCACTCAGGGCTGGAATGTTGTACACCACCATCGGCAAACCATCCGCCGAATCAATAATTGCCCGATAGTGATCGCAGTGTTCTTCAAAG   <  SRR4302543.1619157/94‑1 (MQ=60)
                                                                                             GCCCCACTCAGGGCTGGAATGTTGTACACCACCATCGGCAAACCATCCGCCGAATCAATAATTGCCCGATAGTGATCGCAGTGTTCTTCAAAGC  <  SRR4302543.4074191/94‑1 (MQ=60)
                                                                                             GCCCCACTCAGGGCTGGAATGTTGTACACCACCATCGGCAAACCATCCGCCGAATCAATAATTGCCCGATAGTGATCGCAGTGTTCTTCAAAGC  >  SRR4302543.7394283/1‑94 (MQ=60)
                                                                                             GCCCCACTCAGGGCTGGAATGTTGTACACCACCATCGGCAAACCATCCGCCGAATCAATAATTGCCCGATAGTGATCGCAGTGTTCTTCAAAGC  <  SRR4302543.4376549/94‑1 (MQ=60)
                                                                                             |                                                                                             
TGCTCCATCTGATAGAGATCGCCAGAGGTCTGTTTCAGCGCACCTACGCCAGGCAATGTAACAAGTGTGTTGATCTGATCCAGGGTCAGTTTTACCCCACTCAGGGCTGGAATGTTGTACACCACCATCGGCAAACCATCCGCCGAATCAATAATTGCCCGATAGTGATCGCAGTGTTCTTCAAAGC  >  NC_000913/3370685‑3370871

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑