Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.

ALE, Flask, Isolate	Predicted Mutations	Mean Coverage	Total Reads	Percent Mapped	Mapped Reads	Average Read Length
A1 F1 I1 R1	1696	279.3	15874187	97.8%	15524954	93.0

Breseq alignment

BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	3,410,534	(G)_5→6	coding (569/663 nt)	envR ←	putative transcriptional regulator

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	3,410,529	1	.	G	95.9%	669.2 / 19.2	220	coding (574/663 nt)	envR	putative transcriptional regulator
Reads supporting (aligned to +/- strand): ref base . (3/6); new base G (137/74); total (140/80)
Fisher's exact test for biased strand distribution p-value = 7.57e-02
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 323 total aligned reads displayed.

AATTTACATGACACTTAATTCATTCGTTTGATGAATTAATTTCGTTATGTTTTCATCTGGCATGAACATTCTTAATACGTTATCGACCAGA‑GC‑GGGGG‑CTTGTTT‑ATAAA‑GATCATAACCCGCCATATTCATTAACCAGTTTTGAACAATTCCGCTGAAGGCACCATCAATAATAATCATCAC  >  NC_000913/3410437‑3410619

aaTTTACATGACACTTAATTCATTCGTTTGATGAATTAATTTCGTTATGTTTTCATCTGGCATGAACATTCTTAATACGTTATCGACCAGA‑Gc                                                                                                >  2:821254/1‑93 (MQ=255)

 aTTTACATGACACTTAATTCATTCGTTTGATGAATTAATTTCGTTATGTTTTCATCTGGCATGAACATTCTTAATACGTTATCGACCAGA‑GC‑g                                                                                              <  2:6496196/93‑1 (MQ=255)

 aTTTACATGACACTTAATTCATTCGTTTGATGAATTAATTTCGTTATGTTTTCATCTGGCATGAACATTCTTAATACGTTATCGACCAGA‑GC‑g                                                                                              >  2:6367602/1‑93 (MQ=255)

 aTTTACATGACACTTAATTCATTCGTTTGATGAATTAATTTCGTTATGTTTTCATCTGGCATGAACATTCTTAATACGTTATCGACCAGA‑GC‑g                                                                                              >  1:7760198/1‑93 (MQ=255)

 aTTTACATGACACATAATTCATACGTTTGATGAATTAATTTCGTTATGTTTTCATCTGGCATGTACATTCTTAATACGTTAACGACCAGA‑GC‑g                                                                                              <  1:7033364/93‑1 (MQ=255)

  tttACATGACACTTAATTCATTCGTTTGATGAATTAATTTCGTTATGTTTTCATCTGGCATGAACATTCTTAATACGTTATCGACCAGA‑GC‑gg                                                                                             >  2:448512/1‑93 (MQ=255)

  tttACATGACACTTAATTCATTCGTTTGATGAATTAATTTCGTTATGTTTTCATCTGGCATGAACATTCTTAATACGTTATCGACCAGA‑GC‑gg                                                                                             >  1:3732155/1‑93 (MQ=255)

  tttACATGACACTTAATTCATTCGTTTGATGAATTAATTTCGTTATGTTTTCATCTGGCATGAACATTCTTAATACGTTATCGACCAGA‑GC‑gg                                                                                             >  1:3156751/1‑93 (MQ=255)

  tttACATGACACTTAATTCATTCGTTTGATGAATTAATTTCGTTATGTTTTCATCTGGCATGAACATTCTTAATACGTTATCGACCAGA‑GC‑gg                                                                                             <  1:823317/93‑1 (MQ=255)

   ttACATGACACTTAATTCATTCGTTTGATGAATTAATTTCGTTATGTTTTCATCTGGCATGAACATTCTTAATACGTTATCGACCAGA‑GC‑ggg                                                                                            >  2:3759279/1‑93 (MQ=255)

    tACATGACACTTAATTCATTCGTTTGATGAATTAATTTCGTTATGTTTTCATCTGGCATGAACATTCTTAATACGTTATCGACCAGA‑GC‑gggg                                                                                           <  2:5262081/93‑1 (MQ=255)

    tACATGACACTTAATTCATTCGTTTGATGAATTAATTTCGTTATGTTTTCATCTGGCATGAACATTCTTAATACGTTATCGACCAGA‑GC‑gggg                                                                                           <  2:7334788/93‑1 (MQ=255)

    tACATGACACTTAATTCATTCGTTTGATGAATTAATTTCGTTATGTTTTCATCTGGCATGAACATTCTTAATACGTTATCGACCAGA‑GC‑gggg                                                                                           >  1:1309295/1‑93 (MQ=255)

     aCATGACACTTAGTTCATTCGTTTGATGAATTAATTTCGTTATGTTTTCATCTGGCATAAACATTCTTAATTCGTTATCGACCAGA‑GC‑ggggg                                                                                          <  1:4293806/93‑1 (MQ=255)

      cATGACACTTAATTCATTCGTTTGATGAATTAATTTCGTTATGTTTTCATCTGGCATGAACATTCTTAATACGTTATCGACCAGA‑GC‑gggggg                                                                                         >  2:3079768/1‑92 (MQ=255)

       aTGGCACTTAATTCATTCGTTTGATGAATTAATTTCGTTATGTTTTCATCTGGCATGAACATTCTTAATACGTTATCGACCAGA‑GC‑ggggggc                                                                                        <  1:1632156/93‑3 (MQ=255)

       aTGACACTTAATTCATTCGTTTGATGAATTAATTTCGTTATGTTTTCATCTGGCATGAACATTCTTAATACGTTATCGACCAGA‑GC‑ggggggc                                                                                        <  1:982987/93‑3 (MQ=255)

        tGACACTTAATTCATTCGTTTGATGAATTAATTTCGTTATGTTTTCATCTGGCATGAACATTCTTAATACGTTATCGACCAGA‑GC‑ggggggct                                                                                       >  2:946747/1‑90 (MQ=255)

        tGACACTTAATTCATTCGTTTGATGAATTAATTTCGTTATGTTTTCATCTGGCATGAACATTCTTAATACGTTATCGACCAGA‑GC‑ggggggct                                                                                       <  2:4805028/93‑4 (MQ=255)

        tGACACTTAATTCATTCGTTTGATGAATTAATTTCGTTATGTTTTCATCTGGCATGAACATTCTTAATACGTTATCGACCAGA‑GC‑ggggggct                                                                                       >  1:2824018/1‑90 (MQ=255)

         gACACTTAATTCATTCGTTTGATGAATTAATTTCGTTATGTTTTCATCTGGCATGAACATTCTTAATACGTTATCGACCAGA‑GC‑ggggggctt                                                                                      <  1:1747727/93‑5 (MQ=255)

         gACACTTAATTCATTCGTTTGATGAATTAATTTCGTTATGTTTTCATCTGGCATGAACATTCTTAATACGTTATCGACCAGA‑GC‑ggggggctt                                                                                      <  1:7377995/93‑5 (MQ=255)

         gACACTTAATTCATTCGTTTGATGAATTAATTTCGTTATGTTTTCATCTGGCATGAACATTCTTAATACGTTATCGACCAGA‑GC‑ggggggctt                                                                                      <  1:5018920/93‑5 (MQ=255)

           cacTTAATTCATTCGTTTGATGAATTAATTTCGTTATGTTTTCATCTGGCATGAACATTCTTAATACGTTATCGACCAGA‑GCGGGGGG‑CTTGt                                                                                    >  1:729911/1‑93 (MQ=255)

           cacTTAATTCATTCGTTTGATGAATTAATTTCGTTATGTTTTCATCTGGCATGAACATTCTTAATACGTTATCGACCAGA‑GCGGGGGG‑CTTGt                                                                                    >  2:4989692/1‑93 (MQ=255)

            acTTAATTCATTCGTTTGATGAATTAATTTCGTTATGTTTTCATCTGGCATGAACATTCTTAATACGTTATCGACCAGA‑GCGGGGGG‑CTTGtt                                                                                   >  1:7600283/1‑93 (MQ=255)

              ttAATTCATTCGTTTGATGAATTAATTTCGTTATGTTTTCATCTGGCATGAACATTCTTAATACGTTATCGACCAGA‑GCGGGGGG‑CTTGTTt‑a                                                                                <  1:5038543/93‑1 (MQ=255)

              ttAATTCATTCGTTTGATGAATTAATTTCGTTATGTTTTCATCTGGCATGAACATTCTTAATACGTTATCGACCAGA‑GCGGGGGG‑CTTGTTt‑a                                                                                <  2:251993/93‑1 (MQ=255)

               tAATTCATTCGTTTGATGAATTAATTTCGTTATGTTTTCATCTGGCATGAACATTCTTAATACGTTATCGACCAGA‑GCGGGGGG‑CTTGTTt‑at                                                                               <  1:616466/93‑1 (MQ=255)

                aaTTCATTCGTTTGATGAATTAATTTCGTTATGTTTTCATCTGGCATGAACATTCTTAATACGTTATCGACCAGA‑GCGGGGGG‑CTTGTTt‑ata                                                                              <  1:6823575/93‑1 (MQ=255)

                 attcattcGTTTGATGAATTAATTTCGTTATGTTTTCATCTGGCATGAACATTCTTAATACGTTATCGACCAGA‑GCGGGGGG‑CTTGTTT‑ATaa                                                                             <  2:1198680/93‑1 (MQ=255)

                  ttcattcGTTTGATGAATTAATTTCGTTATGTTTTCATCTGGCATGAACATTCTTAATACGTTATCGACCAGA‑GCGGGGGG‑CTTGTTT‑ATaaa                                                                            <  2:5351380/93‑1 (MQ=255)

                  ttcattcGTTTGATGAATTAATTTCGTTATGTTTTCATCTGGCATGAACATTCTTAATACGTTATCGACCAGA‑GCGGGGGG‑CTTGTTT‑ATaaa                                                                            >  2:7079070/1‑93 (MQ=255)

                   tcattcGTTTGATGAATTAATTTCGTTATGTTTTCATCTGGCATGAACATTCTTAATACGTTATCGACCAGA‑GCGGGGGG‑CTTGTTT‑ATAAA‑g                                                                          <  2:3652730/93‑1 (MQ=255)

                     attcGTTTGATGAATTAATTTCGTTATGTTTTCATCTGGCATGAACATTCTTAATACGTTATCGACCAGA‑GCGGGGGG‑CTTGTTT‑ATAAA‑GAt                                                                        <  2:6429033/93‑1 (MQ=255)

                     attcGTTTGATGAATTAATTTCGTTATGTTTTCATCTGGCATGAACATTCTTAATACGTTATCGACCAGA‑GCGGGGGG‑CTTGTTT‑ATAAA‑GAt                                                                        <  1:6391557/93‑1 (MQ=255)

                     attcGTTTGATGAATTAATTTCGTTATGTTTTCATCTGGCATGAACATTCTTAATACGTTATCGACCAGA‑GCGGGGGG‑CTTGTTT‑ATAAA‑GAt                                                                        >  1:3504719/1‑93 (MQ=255)

                      ttcGTTTGATGAATTAATTTCGTTATGTTTTCATCTGGCATGAACATTCTTAATACGTTATCGACCAGA‑GCGGGGGG‑CTTGTTT‑ATAAA‑GATc                                                                       <  2:6073584/93‑1 (MQ=255)

                       tcGTTTGATGAATTAATTTCGTTATGTTTTCATCTGGCATGAACATTCTTAATACGTTATCGACCAGA‑GCGGGGGG‑CTTGTTT‑ATAAA‑GATCa                                                                      <  1:3935622/93‑1 (MQ=255)

                         gTTTGATGAATTAATTTCGTTATGTTTTCATCTGGCATGAACATTCTTAATACGTTATCGACCAGA‑GCGGGGGG‑CTTGTTT‑ATAAA‑GATCATa                                                                    >  1:2429452/1‑93 (MQ=255)

                          tttGATGAATTAATTTCGTTATGTTTTCATCTGGCATGAACATTCTTAATACGTTATCGACCAGA‑GCGGGGGG‑CTTGTTT‑ATAAA‑GATCATaa                                                                   <  2:3226375/93‑1 (MQ=255)

                          tttGATGAATTAATTTCGTTATGTTTTCATCTGGCATGAACATTCTTAATACGTTATCGACCAGA‑GCGGGGGG‑CTTGTTT‑ATAAA‑GATCATaa                                                                   <  2:5901559/93‑1 (MQ=255)

                          tttGATGAATTAATTTCGTTATGTTTTCATCTGGCATGAACATTCTTAATACGTTATCGACCAGA‑GCGGGGGG‑CTTGTTT‑ATAAA‑GATCATaa                                                                   >  2:7812348/1‑93 (MQ=255)

                           ttGATGAATTAATTTCGTTATGTTTTCATCTGGCATGAACATTCTTAATACGTTATCGACCAGA‑GCGGGGGG‑CTTGTTT‑ATAAA‑GATCATAAc                                                                  >  1:75610/1‑93 (MQ=255)

                              atgaATTAATTTCGTTATGTTTTCATCTGGCATGAACATTCTTAATACGTTATCGACCAGA‑GCGGGGGG‑CTTGTTT‑ATAAA‑GATCATAACCCg                                                               >  2:3916619/1‑93 (MQ=255)

                               tgaATTAATTTCGTTATGTTTTCATCTGGCATGAACATTCTTAATACGTTATCGACCAGA‑GCGGGGGG‑CTTGTTT‑ATAAA‑GATCATAACCCGc                                                              >  1:2708503/1‑93 (MQ=255)

                               tgaATTAATTTCGTTATGTTTTCATCTGGCATGAACATTCTTAATACGTTATCGACCAGA‑GCGGGGGG‑CTTGTTT‑ATAAA‑GATCATAACCCGc                                                              >  2:1582999/1‑93 (MQ=255)

                                 aattaattTCGTTATGTTTTCATCTGGCATGAACATTCTTAATACGTTATCGACCAGA‑GCGGGGGG‑CTTGTTT‑ATAAA‑GATCATACCCCGCCa                                                            <  2:5010933/93‑1 (MQ=255)

                                 aattaattTCGTTATGTTTTCATCTGGAATGAACATTCTTACTACGTTATCGACCAGA‑GCGGGGGG‑CTTGTTT‑ATAAA‑GATCATAACCCGCCa                                                            <  1:4772429/93‑1 (MQ=255)

                                  attaattTCGTTATGTTTTCATCTGGCATGAACATTCTTAATACGTTATCGACCAGA‑GCGGGGGG‑CTTGTTT‑ATAAA‑GATCATAACCCGCCat                                                           >  2:4352972/1‑93 (MQ=255)

                                   ttaattTCGTTATGTTTTCATCTGGCATGAACATTCTTAATACGTTATCGACCAGA‑GCGGGGGG‑CTTGTTT‑ATAAA‑GATCATAACCCGCCata                                                          <  1:2348057/93‑1 (MQ=255)

                                      attTCGTTATGTTTTCATCTGGCATGAACATTCTTAATACGTTATCGACCAGAGGG‑GGGGG‑CTTGTTT‑ATAAA‑GATCATAACCCGCCATATTc                                                       <  2:6794295/93‑1 (MQ=255)

                                      attTCGTTATGTTTTCATCTGGCATGAACATTCTTAATACGTTATCGACCAGA‑GCGGGGGG‑CTTGTTT‑ATAAA‑GATCATAACCCGCCATATTc                                                       >  1:3397324/1‑93 (MQ=255)

                                       tttCGTTATGTTTTCATCTGGCATGAACATTCTTAATACGTTATCGACCAGAGGG‑GGGGG‑CTTGTTT‑ATAAA‑GATCATAACCCGCCATATTCa                                                      <  2:7650434/93‑1 (MQ=255)

                                        ttCGTTATGTTTTCATCTGGCATGAACATTCTTAATACGTTATCGACCAGA‑GCGGGGGG‑CTTGTTT‑ATAAA‑GATCATAACCCGCCATATTCAt                                                     <  2:3472630/93‑1 (MQ=255)

                                         tCGTTATGTTTTCATCTGGCATGAACATTCTTAATACGTTATCGACCAGA‑GCGGGGGG‑CTTGTTT‑ATAAA‑GATCATAACCCGCCATATTCAtt                                                    >  1:6302467/1‑93 (MQ=255)

                                            ttATGTTTTCATCTGGCATGAACATTCTTAATACGTTATCGACCAGA‑GCGGGGGG‑CTTGTTT‑ATAAA‑GATCATAACCCGCCATATTCATTAAc                                                 >  2:5198931/1‑93 (MQ=255)

                                             tATGTTTTCATCTGGCATGAACATTCTTAATACGTTATCGACCAGA‑GCGGGGGG‑CTTGTTT‑ATAAA‑GATCATAACCCGCCATATTCATTAAcc                                                >  1:5609939/1‑93 (MQ=255)

                                               tGTTTTCATCTGGCATGAACATTCTTAATACGTTATCGACCAGA‑GCGGGGGG‑CTTGTTT‑ATAAA‑GATCATAACCCGCCATATTCATTAACCAg                                              >  1:5298942/1‑93 (MQ=255)

                                                gTTTTCATCTGGCATGAACATTCTTAATACGTTATCGACCAGA‑GCGGGGGG‑CTTGTTT‑ATAAA‑GATCATAACCCGCCATATTCATTAACCAGt                                             >  1:4730408/1‑93 (MQ=255)

                                                gTTTTCATCTGGCATGAACATTCTTAATACGTTATCGACCAGA‑GCGGGGGG‑CTTGTTT‑ATAAA‑GATCATAACCCGCCATATTCATTAACCAGt                                             >  2:744487/1‑93 (MQ=255)

                                                 ttttCATCTGGCATGAACATTCTTAATACGTTATCGACCAGA‑GCGGGGGG‑CTTGTTT‑ATAAA‑GATCATAACCCGCCATATTCATTAACCAGtt                                            >  2:4166673/1‑93 (MQ=255)

                                                 ttttCATCTGGAAGGAATATTCTTAATGTGTTAGCGACCGGG‑GCGGGGGG‑CTTTTTT‑ATAAA‑GATAATACCCCGCCATATTCATTAACCAGtt                                            <  2:5453995/93‑1 (MQ=255)

                                                  tttCATCTGGCATGAACATTCTTAATACGTTATCGACCAGA‑GCGGGGGG‑CTTGTTT‑ATAAA‑GATCATAACCCGCCATATTCATTAACCAGttt                                           >  1:2109184/1‑93 (MQ=255)

                                                   ttCATCTGCAATAAACTTTCTTAATACTTTATCGACAAGA‑GCTGGGGG‑CTTGTTT‑ATAAA‑TATCATACCCCGCCATATTCATTAACCAGtttt                                          <  2:1056786/93‑1 (MQ=255)

                                                      aTCTGGCATGAACATTCTTAATACGTTATCGACCAGA‑GCGGGGGG‑CTTGTTT‑ATAAA‑GATCATAACCCGCCATATTCATTAACCAGTTTTGaa                                       >  2:4854250/1‑93 (MQ=255)

                                                      aTCTGGAATAAACATTCTTAATACGTTATCGACCAGA‑GCGGGGGG‑TTTGTTT‑ATAAA‑GATCATACCCCGCCATATTCATTAACCAGTTTTGaa                                       <  2:7163378/93‑1 (MQ=255)

                                                      aTCGGGCATAAACATTCTTAATACGTTATCGACCAGAGGG‑GGGGG‑CTTGTTT‑ATAAA‑GATCATACCCCGCCATATTCATTAACCAGTTTTGaa                                       <  1:5197214/93‑1 (MQ=255)

                                                       tCTGGCATGAACATTCTTGATACGTTATCGACCAGA‑GCGGGGGG‑CTTGTTT‑ATAAA‑GATCATAACCCGCCATATTCATTAACCAGTTTTGAAc                                      >  1:2566724/1‑93 (MQ=255)

                                                         tGGCATGAACATTCTTAATACGTTATCGACCAGA‑GCGGGGGG‑CTTGTTT‑ATAAA‑GATCATAACCCGCCATATTCATTAACCAGTTTTGAACaa                                    >  1:2148731/1‑93 (MQ=255)

                                                         tGGCATAAACATTCTTAATACGTTATCGACCAGA‑GCGGGGGG‑CTTTTTT‑ATAAA‑GATCATACCCCGCCATATTCATTAACCAGTTTTGAACaa                                    <  1:1938920/93‑1 (MQ=255)

                                                          ggCATGAACATTCTTAATACGTTATCGACCAGA‑GCGGGGGG‑CTTGTTT‑ATAAA‑GATCATAACCCGCCATATTCATTAACCAGTTTTGAACAAt                                   >  2:1811192/1‑93 (MQ=255)

                                                           gCATGACCATTTTTAATACTTTATCGACCAGA‑GCGGGGGG‑CTTTTTT‑ATAAA‑GATCATACCCCGCCATATTCATTAACCAGTTTTGAACAAtt                                  <  1:587645/93‑1 (MQ=255)

                                                            cATGAACATTCTTAATACGTTATCGACCAGA‑GCGGGGGG‑CTTGTTT‑ATAAA‑GATCTTAACCCACCATATTCATTAACCAGTTTTGAACAATTc                                 <  2:4761756/93‑1 (MQ=255)

                                                            cATGAACATTCTTAATACGTTATCGACCAGA‑GCGGGGGG‑CTTGTTT‑ATAAA‑GATCATAACCCGCCATATTCATTAACCAGTTTTGAACAATTc                                 <  2:2043378/93‑1 (MQ=255)

                                                             aTGAACATTCTTAATACGTTATCGACCAGA‑GCGGGGGG‑CTTGTTT‑ATAAA‑GATCATAACCCGCCCTATTCATTAACCAGTTTTGAACCATTcc                                >  1:5886474/1‑93 (MQ=255)

                                                              tGAACATTCTTAATACGTTATCGACCAGA‑GCGGGGGG‑CTTGTTT‑ATAAA‑GATCATAACCCGCCATATTCATTAACCAGTTTTGAACAATTCCg                               >  1:6754905/1‑93 (MQ=255)

                                                               gAACATTTTTAATACGTTATCGCCCAGA‑GCGGGGGG‑CTTGTTT‑ATAAA‑GATAATAACCCGCCATATTCATTAACCAGTTTTGAACAATTCCGc                              <  1:7868649/93‑1 (MQ=255)

                                                                aaCATTCTTAATCCTTTATCGACAAGA‑GCGGGGGG‑TTTGTTT‑ATAAA‑GATCATACCCCGCCATATTCATTAACCAGTTTTGAACAATTCCGCt                             <  2:580272/93‑1 (MQ=255)

                                                                  cATTCTTAATACGTTATCGACCAGA‑GC‑GGGGGTCTTGTTT‑ATAAA‑GATCATACCCCGCCATATTCATTAACCAGTTTTGAACAATTCCGCTGa                           <  1:2237565/93‑1 (MQ=255)

                                                                   aTTCTTAATACGTTATCGACCAGA‑GCGGGGGG‑CTTGTTT‑ATAAA‑GATCATAACCCGCCATATTCATTAACCAGTTTTGAACAATTCCGCTGaa                          >  2:3602311/1‑93 (MQ=255)

                                                                   aTTCTTAATACGTTATCGACCAGA‑GCGGGGGG‑CTTGTTT‑ATAAA‑GATCATAACCCGCCATATTCATTAACCAGTTTTGAACAATTCCGCTGaa                          >  2:2785470/1‑93 (MQ=255)

                                                                   aTTCTTAATACGTTATCGACCAGA‑GCGGGGGG‑CTTGTTT‑ATAAA‑GATCATAACCCGCCATATTCATTAACCAGTTTTGAACAATTCCGCTGaa                          >  1:4008031/1‑93 (MQ=255)

                                                                   aTTCTAAATACGTTATCGACAAGA‑GC‑GGGGGTCTTGTTT‑ATAAA‑GATCATACCCCGCCATATTCATTAACCAGTTTTGAACAATTCCGCTGaa                          <  1:2984763/93‑1 (MQ=255)

                                                                    ttCTTAATACGTTATCGACCAGAGGG‑GGGGG‑TTTGTTT‑AAAAA‑GATCATAACCCGCCATATTCATTAACCAGTTTTGAACAATTCCGCTGAAg                         <  1:115839/93‑1 (MQ=255)

                                                                     ttttAATACGTTATCGACCAGG‑GG‑GGGGGTTTTGTTT‑ATAAA‑GATCATACCCCGCCATATTCATTAACCAGTTTTGAACAATTCCGCTGAAgg                        <  2:1454634/91‑1 (MQ=255)

                                                                         aaTCCGTTATCGACCAGA‑GCGGGGGG‑CTTTTTT‑AAAAA‑GATCATACCCCGCCATATTCATTAACCAGTTTTGAACAATTCCGCTGAAGGCAcc                    <  2:6625002/93‑1 (MQ=255)

                                                                         aaTACGTTATCGCCCAGA‑GCGGGGGG‑TTTGTTT‑ATAAA‑GATCATACCCCGCCATATTCATTAACCAGTTTTGAACAATTCCGCTGAAGGCAcc                    <  1:7160970/93‑1 (MQ=255)

                                                                           tgcGTGATCGACCAGA‑GCGGGGGG‑CTTGTTT‑ATAAA‑GATCATAACCCGCCATATTCATTAACCAGTTTTGAACAATTCCGCTGAAGGCACCAt                  <  1:6042900/91‑1 (MQ=255)

                                                                             cGTTATCGACCAGA‑GCGGGGGG‑CTTGTTT‑ATAAA‑GATCATAACCCGCCATATTCATTAACCAGTTTTGAACAATTCCGCTGAAGGCACCATCa                >  2:6126391/1‑93 (MQ=255)

                                                                              gTTATCGACCAGA‑GCGGGGGG‑CTTGTTT‑ATAAA‑GATCATAACCCGCCATATTCATTAACCAGTTTTGAACAATTCCGCTGAAGGCACCATCaa               >  2:2317387/1‑93 (MQ=255)

                                                                               ttATCGACCAGA‑GCGGGGGG‑CTTGTTT‑ATAAA‑GATCATAACCCGCCATATTCATTAACCAGTTTTGAACAATTCCGCTGAAGGCACCATCaat              >  1:4451643/1‑93 (MQ=255)

                                                                                 aTCGACCAGA‑GCGGGGGG‑TTTGTTT‑ATAAA‑TATCAAACCCCGCCATATTCATTAACCAGTTTTGAACAATTCCGCTGAAGGCACCATCaataa            <  2:1113802/93‑1 (MQ=255)

                                                                                  tCGACCAGA‑GCGGGGGG‑CTTGTTT‑ATAAA‑GATCATAACCCGCCATATTCATTAACCAGTTTTGAACAATTCCGCTGAAGGCACCATCaataat           >  2:4390227/1‑93 (MQ=255)

                                                                                    gACCAGG‑GCGGGGGG‑CTTTTTT‑AAAAA‑GATCATACCCCGCCATATTCATTAACCAGTTTTGAACAATTCCGCTGAAGGCACCATCaataataa         <  1:1552787/93‑1 (MQ=255)

                                                                                     aCCAGA‑GG‑GGGGG‑GTTTTTTAATAAA‑AATCATACCCCGCCATATTCATTAACCAGTTTTGAACAATTCCGCTGAAGGCACCATCaataataat        <  2:4309843/93‑1 (MQ=255)

                                                                                      ccAGA‑GCGGGGGG‑CTTGTTT‑ATAAA‑GATCATAACCCGCCATATTCATTAACCAGTTTTGAACAATTCCGCTGAAGGCACCATCAATAATAatc       >  2:3992322/1‑93 (MQ=255)

                                                                                       cAGA‑GCGGGGGG‑TTTTTTT‑ATAAA‑GATCATACCCCGCCATATTCATTAACCAGTTTTGAACAATTCCGCTGAAGGCACCATCAATAATAatca      <  1:4137034/93‑1 (MQ=255)

                                                                                       cAGA‑GCGGGGGG‑CTTGTTT‑ATAAA‑GATCATAACCCGCCATATTCATTAACCAGTTTTGAACAATTCCGCTGAAGGCACCATCAATAATAatca      >  2:2682363/1‑93 (MQ=255)

                                                                                        gga‑gG‑GGGGG‑GTTTTTT‑AAAAAGGATAATACCCCGCCATATTCATTAACCAGTTTTGAACAATTCCGCTGAAGGCACCATCAATAATAatcat     <  1:5413270/92‑1 (MQ=255)

AATTTACATGACACTTAATTCATTCGTTTGATGAATTAATTTCGTTATGTTTTCATCTGGCATGAACATTCTTAATACGTTATCGACCAGA‑GC‑GGGGG‑CTTGTTT‑ATAAA‑GATCATAACCCGCCATATTCATTAACCAGTTTTGAACAATTCCGCTGAAGGCACCATCAATAATAATCATCAC  >  NC_000913/3410437‑3410619

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 18 ≤` `ATCG/ATCG` `< 29 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`

GATK/CNVnator alignment

BRESEQ :: bam2aln output

TACATGACACTTAATTCATTCGTTTGATGAATTAATTTCGTTATGTTTTCATCTGGCATGAACATTCTTAATACGTTATCGACCA‑GA‑GC‑‑GGGGG‑CTT‑GTTTATAAAGATCATAACCCGCCATATTCATTAACCAGTTTTGAACAATTCCGCTGAAGGCACCATCAATAATAATCATCACAACATCT  >  NC_000913/3410441‑3410626

TACATGACACTTAATTCATTCGTTTGATGAATTAATTTCGTTATGTTTTCATCTGGCATGAACATTCTTAATACGTTATCGACCA‑GA‑GC‑‑GGGGG                                                                                                >  SRR4302543.2218198/1‑94 (MQ=60)

TACATGACACTTAATTCATTCGTTTGATGAATTAATTTCGTTATGTTTTCATCTGGCATGAACATTCTTAATACGTTATCGACCA‑GA‑GC‑‑GGGGG                                                                                                <  SRR4302543.7697079/94‑1 (MQ=60)

TACATGACACTTAATTCATTCGTTTGATGAATTAATTTCGTTATGTTTTCATCTGGCATGAACATTCTTAATACGTTATCGACCA‑GA‑GC‑‑GGGGG                                                                                                <  SRR4302543.7399839/94‑1 (MQ=60)

TACATGACACTTAATTCATTCGTTTGATGAATTAATTTCGTTATGTTTTCATCTGGCATGAACATTCTTAATACGTTATCGACCA‑GA‑GC‑‑GGGGG                                                                                                <  SRR4302543.2413225/94‑1 (MQ=60)

TACATGACACTTAATTCATTCGTTTGATGAATTAATTTCGTTATGTTTTCATCTGGCATGAACATTCTTAATACGTTATCGACCA‑GA‑GC‑‑GGGGG                                                                                                <  SRR4302543.5627581/94‑1 (MQ=60)

 ACATGACACTTAGTTCATTCGTTTGATGAATTAATTTCGTTATGTTTTCATCTGGCATAAACATTCTTAATTCGTTATCGACCA‑GA‑GC‑‑GGGGG‑G                                                                                              <  SRR4302543.4332838/94‑1 (MQ=60)

 ACATGACACTTAATTCATTCGTTTGATGAATTAATTTCGTTATGTTTTCATCTGGCATGAACATTCTTAATACGTTATCGACCA‑GA‑GC‑‑GGGGG‑G                                                                                              >  SRR4302543.3995223/1‑94 (MQ=60)

   ATGGCACTTAATTCATTCGTTTGATGAATTAATTTCGTTATGTTTTCATCTGGCATGAACATTCTTAATACGTTATCGACCA‑GA‑GC‑‑GGGGGgct                                                                                             <  SRR4302543.1646708/94‑4 (MQ=60)

   ATGACACTTAATTCATTCGTTTGATGAATTAATTTCGTTATGTTTTCATCTGGCATGAACATTCTTAATACGTTATCGACCA‑GA‑GC‑‑GGGGGgct                                                                                             >  SRR4302543.2849853/1‑91 (MQ=60)

   ATGACACTTAATTCATTCGTTTGATGAATTAATTTCGTTATGTTTTCATCTGGCATGAACATTCTTAATACGTTATCGACCA‑GA‑GC‑‑GGGGGgct                                                                                             <  SRR4302543.991664/94‑4 (MQ=60)

    TGACACTTAATTCATTCGTTTGATGAATTAATTTCGTTATGTTTTCATCTGGCATGAACATTCTTAATACGTTATCGACCA‑GA‑GCG‑GGGGG‑CTT                                                                                            <  SRR4302543.185996/94‑1 (MQ=60)

    TGACACTTAATTCATTCGTTTGATGAATTAATTTCGTTATGTTTTCATCTGGCATGAACATTCTTAATACGTTATCGACCA‑GA‑GCG‑GGGGG‑CTT                                                                                            <  SRR4302543.5937447/94‑1 (MQ=60)

     GACACTTAATTCATTCGTTTGATGAATTAATTTCGTTATGTTTTCATCTGGCATGAACATTCTTAATACGTTATCGACCA‑GA‑GCG‑GGGGG‑CTT‑G                                                                                          <  SRR4302543.5374107/94‑1 (MQ=60)

     GACACTTAATTCATTCGTTTGATGAATTAATTTCGTTATGTTTTCATCTGGCATGAACATTCTTAATACGTTATCGACCA‑GA‑GCG‑GGGGG‑CTT‑G                                                                                          <  SRR4302543.1763336/94‑1 (MQ=60)

     GACACTTAATTCATTCGTTTGATGAATTAATTTCGTTATGTTTTCATCTGGCATGAACATTCTTAATACGTTATCGACCA‑GA‑GCG‑GGGGG‑CTT‑G                                                                                          <  SRR4302543.5064600/94‑1 (MQ=60)

     GACACTTAATTCATTCGTTTGATGAATTAATTTCGTTATGTTTTCATCTGGCATGAACATTCTTAATACGTTATCGACCA‑GA‑GCG‑GGGGG‑CTT‑G                                                                                          <  SRR4302543.7448917/94‑1 (MQ=60)

     GACACTTAATTCATTCGTTTGATGAATTAATTTCGTTATGTTTTCATCTGGCATGAACATTCTTAATACGTTATCGACCA‑GA‑GCG‑GGGGG‑CTT‑G                                                                                          >  SRR4302543.1199901/1‑94 (MQ=60)

      ACACTTAATTCATTCGTTTGATGAATTAATTTCGTTATGTTTTCATCTGGCATGAACATTCTTAATACGTTATCGACCA‑GA‑GCG‑GGGGG‑CTT‑GT                                                                                         <  SRR4302543.2730633/94‑1 (MQ=60)

      ACACTTAATTCATTCGTTTGATGAATTAATTTCGTTATGTTTTCATCTGGCATGAACATTCTTAATACGTTATCGACCA‑GA‑GCG‑GGGGG‑CTT‑GT                                                                                         >  SRR4302543.736459/1‑94 (MQ=60)

       CACTTAATTCATTCGTTTGATGAATTAATTTCGTTATGTTTTCATCTGGCATGAACATTCTTAATACGTTATCGACCA‑GA‑GCG‑GGGGG‑CTT‑GTT                                                                                        >  SRR4302543.3298802/1‑94 (MQ=60)

       CACTTAATTCATTCGTTTGATGAATTAATTTCGTTATGTTTTCATCTGGCATGAACATTCTTAATACGTTATCGACCA‑GA‑GCG‑GGGGG‑CTT‑GTT                                                                                        >  SRR4302543.7672469/1‑94 (MQ=60)

        ACTTAATTCATTCGTTTGATGAATTAATTTCGTTATGTTTTCATCTGGCATGAACATTCTTAATACGTTATCGACCA‑GA‑GCG‑GGGGG‑CTT‑GTTT                                                                                       >  SRR4302543.2146882/1‑94 (MQ=60)

          TTAATTCATTCGTTTGATGAATTAATTTCGTTATGTTTTCATCTGGCATGAACATTCTTAATACGTTATCGACCA‑GA‑GCG‑GGGGG‑CTT‑GTTTAT                                                                                     <  SRR4302543.1679944/94‑1 (MQ=60)

          TTAATTCATTCGTTTGATGAATTAATTTCGTTATGTTTTCATCTGGCATGAACATTCTTAATACGTTATCGACCA‑GA‑GCG‑GGGGG‑CTT‑GTTTAT                                                                                     <  SRR4302543.5066873/94‑1 (MQ=60)

          TTAATTCATTCGTTTGATGAATTAATTTCGTTATGTTTTCATCTGGCATGAACATTCTTAATACGTTATCGACCA‑GA‑GCG‑GGGGG‑CTT‑GTTTAT                                                                                     <  SRR4302543.5084371/94‑1 (MQ=60)

          TTAATTCATTCGTTTGATGAATTAATTTCGTTATGTTTTCATCTGGCATGAACATTCTTAATACGTTATCGACCA‑GA‑GCG‑GGGGG‑CTT‑GTTTAT                                                                                     >  SRR4302543.2657302/1‑94 (MQ=60)

           TAATTCATTCGTTTGATGAATTAATTTCGTTATGTTTTCATCTGGCATGAACATTCTTAATACGTTATCGACCA‑GA‑GCG‑GGGGG‑CTT‑GTTTATA                                                                                    <  SRR4302543.622104/94‑1 (MQ=60)

            AATTCATTCGTTTGATGAATTAATTTCGTTATGTTTTCATCTGGCATGAACATTCTTAATACGTTATCGACCA‑GA‑GCG‑GGGGG‑CTT‑GTTTATAA                                                                                   <  SRR4302543.6887993/94‑1 (MQ=60)

             ATTCATTCGTTTGATGAATTAATTTCGTTATGTTTTCATCTGGCATGAACATTCTTAATACGTTATCGACCA‑GA‑GCG‑GGGGG‑CTT‑GTTTATAAA                                                                                  >  SRR4302543.1975167/1‑94 (MQ=60)

             ATTCATTCGTTTGATGAATTAATTTCGTTATGTTTTCATCTGGCATGAACATTCTTAATACGTTATCGACCA‑GA‑GCG‑GGGGG‑CTT‑GTTTATAAA                                                                                  >  SRR4302543.6834521/1‑94 (MQ=60)

             ATTCATTCGTTTGATGAATTAATTTCGTTATGTTTTCATCTGGCATGAACATTCTTAATACGTTATCGACCA‑GA‑GCG‑GGGGG‑CTT‑GTTTATAAA                                                                                  <  SRR4302543.1909162/94‑1 (MQ=60)

             ATTCATTCGTTTGATGAATTAATTTCGTTATGTTTTCATCTGGCATGAACATTCTTAATACGTTATCGACCA‑GA‑GCG‑GGGGG‑CTT‑GTTTATAAA                                                                                  >  SRR4302543.2924269/1‑94 (MQ=60)

              TTCATTCGTTTGATGAATTAATTTCGTTATGTTTTCATCTGGCATGAACATTCTTAATACGTTATCGACCA‑GA‑GCG‑GGGGG‑CTT‑GTTTATAAAG                                                                                 <  SRR4302543.2349123/94‑1 (MQ=60)

              TTCATTCGTTTGATGAATTAATTTCGTTATGTTTTCATCTGGCATGAACATTCTTAATACGTTATCGACCA‑GA‑GCG‑GGGGG‑CTT‑GTTTATAAAG                                                                                 <  SRR4302543.6225557/94‑1 (MQ=60)

               TCATTCGTTTGATGAATTAATTTCGTTATGTTTTCATCTGGCATGAACATTCTTAATACGTTATCGACCA‑GA‑GCG‑GGGGG‑CTT‑GTTTATAAAGA                                                                                >  SRR4302543.6973499/1‑94 (MQ=60)

               TCATTCGTTTGATGAATTAATTTCGTTATGTTTTCATCTGGCATGAACATTCTTAATACGTTATCGACCA‑GA‑GCG‑GGGGG‑CTT‑GTTTATAAAGA                                                                                >  SRR4302543.2866810/1‑94 (MQ=60)

                CATTCGTTTGATGAATTAATTTCGTTATGTTTTCATCTGGCATGAACATTCTTAATACGTTATCGACCA‑GA‑GCG‑GGGGG‑CTT‑GTTTATAAAGAT                                                                               >  SRR4302543.3536053/1‑94 (MQ=60)

                CATTCGTTTGATGAATTAATTTCGTTATGTTTTCATCTGGCATGAACATTCTTAATACGTTATCGACCA‑GA‑GCG‑GGGGG‑CTT‑GTTTATAAAGAT                                                                               <  SRR4302543.7702050/94‑1 (MQ=60)

                 ATTCGTTTGATGAATTAATTTCGTTATGTTTTCATCTGGCATGAACATTCTTAATACGTTATCGACCA‑GA‑GCG‑GGGGG‑CTT‑GTTTATAAAGATC                                                                              >  SRR4302543.7395653/1‑94 (MQ=60)

                 ATTCGTTTGATGAATTAATTTCGTTATGTTTTCATCTGGCATGAACATTCTTAATACGTTATCGACCA‑GA‑GCG‑GGGGG‑CTT‑GTTTATAAAGATC                                                                              <  SRR4302543.7140842/94‑1 (MQ=60)

                 ATTCGTTTGATGAATTAATTTCGTTATGTTTTCATCTGGCATGAACATTCTTAATACGTTATCGACCA‑GA‑GCG‑GGGGG‑CTT‑GTTTATAAAGATC                                                                              <  SRR4302543.6451724/94‑1 (MQ=60)

                  TTCGTTTGATGAATTAATTTCGTTATGTTTTCATCTGGCATGAACATTCTTAATACGTTATCGACCA‑GA‑GCG‑GGGGG‑CTT‑GTTTATAAAGATCA                                                                             >  SRR4302543.4411440/1‑94 (MQ=60)

                  TTCGTTTGATGAATTAATTTCGTTATGTTTTCATCTGGCATGAACATTCTTAATACGTTATCGACCA‑GA‑GCG‑GGGGG‑CTT‑GTTTATAAAGATCA                                                                             <  SRR4302543.5268182/94‑1 (MQ=60)

                  TTCGTTTGATGAATTAATTTCGTTATGTTTTCATCTGGCATGAACATTCTTAATACGTTATCGACCA‑GA‑GCG‑GGGGG‑CTT‑GTTTATAAAGATCA                                                                             <  SRR4302543.161840/94‑1 (MQ=60)

                  TTCGTTTGATGAATTAATTTCGTTATGTTTTCATCTGGCATGAACATTCTTAATACGTTATCGACCA‑GA‑GCG‑GGGGG‑CTT‑GTTTATAAAGATCA                                                                             <  SRR4302543.989938/94‑1 (MQ=60)

                   TCGTTTGATGAATTAATTTCGTTATGTTTTCATCTGGCATGAACATTCTTAATACGTTATCGACCA‑GA‑GCG‑GGGGG‑CTT‑GTTTATAAAGATCAT                                                                            <  SRR4302543.5084334/94‑1 (MQ=60)

                   TCGTTTGATGAATTAATTTCGTTATGTTTTCATCTGGCATGAACATTCTTAATACGTTATCGACCA‑GA‑GCG‑GGGGG‑CTT‑GTTTATAAAGATCAT                                                                            >  SRR4302543.353414/1‑94 (MQ=60)

                   TCGTTTGATGAATTAATTTCGTTATGTTTTCATCTGGCATGAACATTCTTAATACGTTATCGACCA‑GA‑GCG‑GGGGG‑CTT‑GTTTATAAAGATCAT                                                                            >  SRR4302543.7886777/1‑94 (MQ=60)

                   TCGTTTGATGAATTAATTTCGTTATGTTTTCATCTGGCATGAACATTCTTAATACGTTATCGACCA‑GA‑GCG‑GGGGG‑CTT‑GTTTATAAAGATCAT                                                                            <  SRR4302543.3970394/94‑1 (MQ=60)

                    CGTTTGATGAATTAATTTCGTTATGTTTTCATCTGGCATGAACATTCTTAATACGTTATCGACCA‑GA‑GCG‑GGGGG‑CTT‑GTTTATAAAGATCATA                                                                           >  SRR4302543.1319787/1‑94 (MQ=60)

                    CGTTTGATGAATTAATTTCGTTATGTTTTCATCTGGCATGAACATTCTTAATACGTTATCGACCA‑GA‑GCG‑GGGGG‑CTT‑GTTTATAAAGATCATA                                                                           >  SRR4302543.2451379/1‑94 (MQ=60)

                    CGTTTGATGAATTAATTTCGTTATGTTTTCATCTGGCATGAACATTCTTAATACGTTATCGACCA‑GA‑GCG‑GGGGG‑CTT‑GTTTATAAAGATCATA                                                                           >  SRR4302543.3493734/1‑94 (MQ=60)

                      TTTGATGAATTAATTTCGTTATGTTTTCATCTGGCATGAACATTCTTAATACGTTATCGACCA‑GA‑GCG‑GGGGG‑CTT‑GTTTATAAAGATCATAAC                                                                         >  SRR4302543.6937866/1‑94 (MQ=60)

                      TTTGATGAATTAATTTCGTTATGTTTTCATCTGGCATGAACATTCTTAATACGTTATCGACCA‑GA‑GCG‑GGGGG‑CTT‑GTTTATAAAGATCATAAC                                                                         >  SRR4302543.76303/1‑94 (MQ=60)

                      TTTGATGAATTAATTTCGTTATGTTTTCATCTGGCATGAACATTCTTAATACGTTATCGACCA‑GA‑GCG‑GGGGG‑CTT‑GTTTATAAAGATCATAAC                                                                         <  SRR4302543.7846182/94‑1 (MQ=60)

                       TTGATGAATTAATTTCGTTATGTTTTCATCTGGCATGAACATTCTTAATACGTTATCGACCA‑GA‑GCG‑GGGGG‑CTT‑GTTTATAAAGATCATAACC                                                                        >  SRR4302543.1619093/1‑94 (MQ=60)

                       TTGATGAATTAATTTCGTTATGTTTTCATCTGGCATGAACATTCTTAATACGTTATCGACCA‑GA‑GCG‑GGGGG‑CTT‑GTTTATAAAGATCATAACC                                                                        >  SRR4302543.3549445/1‑94 (MQ=60)

                       TTGATGAATTAATTTCGTTATGTTTTCATCTGGCATGAACATTCTTAATACGTTATCGACCA‑GA‑GCG‑GGGGG‑CTT‑GTTTATAAAGATCATAACC                                                                        <  SRR4302543.7481826/94‑1 (MQ=60)

                       TTGATGAATTAATTTCGTTATGTTTTCATCTGGCATGAACATTCTTAATACGTTATCGACCA‑GA‑GCG‑GGGGG‑CTT‑GTTTATAAAGATCATAACC                                                                        <  SRR4302543.7198774/94‑1 (MQ=60)

                        TGATGAATTAATTTCGTTATGTTTTCATCTGGCATGAACATTCTTAATACGTTATCGACCA‑GA‑GCG‑GGGGG‑CTT‑GTTTATAAAGATCATAACCC                                                                       >  SRR4302543.4908732/1‑94 (MQ=60)

                        TGATGAATTAATTTCGTTATGTTTTCATCTGGCATGAACATTCTTAATACGTTATCGACCA‑GA‑GC‑‑GGGGG‑CTT‑GTTTATAAAGAACATAACCCC                                                                      >  SRR4302543.2777434/1‑94 (MQ=60)

                         GATGAATTAATTTCGTTATGTTTTCATCTGGCATGAACATTCTTAATACGTTATCGACCA‑GA‑GCG‑GGGGG‑CTT‑GTTTATAAAGATCATAACCCG                                                                      <  SRR4302543.760477/94‑1 (MQ=60)

                         GATGAATTAATTTCGTTATGTTTTCATCTGGCATGAACATTCTTAATACGTTATCGACCA‑GA‑GCG‑GGGGG‑CTT‑GTTTATAAAGATCATAACCCG                                                                      >  SRR4302543.291504/1‑94 (MQ=60)

                         GATGAATTAATTTCGTTATGTTTTCATCTGGCATGAACATTCTTAATACGTTATCGACCA‑GA‑GCG‑GGGGG‑CTT‑GTTTATAAACATCATAACCCG                                                                      >  SRR4302543.2846614/1‑94 (MQ=60)

                          ATGAATTAATTTCGTTATGTTTTCATCTGGCATGAACATTCTTAATACGTTATCGACCA‑GA‑GCG‑GGGGG‑CTT‑GTTTATAAAGATCATAACCCGC                                                                     >  SRR4302543.2733091/1‑94 (MQ=60)

                            GAATTAATTTCGTTATGTTTTCATCTGGCATGAACATTCTTAATACGTTATCGACCA‑GA‑GCG‑GGGGG‑CTT‑GTTTATAAAGATCATAACCCGCCA                                                                   <  SRR4302543.5156330/94‑1 (MQ=60)

                             AATTAATTTCGTTATGTTTTCATCTGGCATGAACATTCTTAATACGTTATCGACCA‑GA‑GCG‑GGGGG‑CTT‑GTTTATAAAGATCATAACCCGCCAT                                                                  >  SRR4302543.2322470/1‑94 (MQ=60)

                             AATTAATTTCGTTATGTTTTCATCTGGAATGAACATTCTTACTACGTTATCGACCA‑GA‑GCG‑GGGGG‑CTT‑GTTTATAAAGATCATAACCCGCCAT                                                                  <  SRR4302543.4816044/94‑1 (MQ=60)

                              ATTAATTTCGTTATGTTTTCATCTGGCATGAACATTCTTAATACGTTATCGACCA‑GA‑GCG‑GGGGG‑CTT‑GTTTATAAAGATCATAACCCGCCATA                                                                 >  SRR4302543.5744076/1‑94 (MQ=60)

                               TTAATTTCGTTATGTTTTCATCTGGCATGAACATTCTTAATACGTTATCGACCA‑GA‑GCG‑GGGGG‑CTT‑GTTTATAAAGATCATAACCCGCCATAT                                                                <  SRR4302543.6372481/94‑1 (MQ=60)

                               TTAATTTCGTTATGTTTTCATCTGGCATGAACATTCTTAATACGTTATCGACCA‑GA‑GCG‑GGGGG‑CTT‑GTTTATAAAGATCATAACCCGCCATAT                                                                <  SRR4302543.2369348/94‑1 (MQ=60)

                                TAATTTCGTTATGTTTTCATCTGGCATGAACATTCTTAATACGTTATCGACCA‑GA‑GCG‑GGGGG‑CTT‑GTTTATAAAGATCATAACCCGCCATATT                                                               >  SRR4302543.1367472/1‑94 (MQ=60)

                                 AATTTCGTTATGTTTTCATCTGGCATGAACATTCTTAATACGTTATCGACCA‑GA‑GCG‑GGGGG‑CTT‑GTTTATAAAGATCATAACCCGCCATATTC                                                              >  SRR4302543.3427771/1‑94 (MQ=60)

                                  ATTTCGTTTTTTTTTCATCTGGCATGAACATTCTTAATACGTTATCGACCA‑GA‑GCG‑GGGGG‑TTT‑GTTTATAAAGATCATAACCCGCCATATTCA                                                             <  SRR4302543.6752442/94‑1 (MQ=60)

                                   TTTCTTTATGTTTTCATCTGAAATGAAAATTCTTAATCGGTTATCGACCA‑GG‑GCG‑GGGGG‑CTT‑GTTTATAAAGACCATAACCCGCCATATTCAT                                                            <  SRR4302543.4129769/94‑1 (MQ=46)

                                    TTCGTTATGTTTTCATCTGGCATGAACATTCTTAATACGTTATCGACCA‑GA‑GCG‑GGGGG‑CTT‑GTTTATAAAGATCATAACCCGCCATATTCATT                                                           >  SRR4302543.6361765/1‑94 (MQ=60)

                                    TTCGTTATGTTTTCATCTGGCATGAACATTCTTAATACGTTATCGACCA‑GA‑GCG‑GGGGG‑CTT‑GTTTATAAAGATCATAACCCGCCATATTCATT                                                           >  SRR4302543.3282254/1‑94 (MQ=60)

                                    TTCGTTAAGTTTTCATCTGGCATGAACATTCTTAATACGTTATCGACCA‑GA‑GCG‑GGGGG‑CTT‑GTTTATAAAGATCATAACCCGCCATATTCATA                                                           >  SRR4302543.6051412/1‑94 (MQ=60)

                                     tcttttttTTTTCATCTGGCATAAACATTCTTAATCGGTTATCGACCA‑GA‑GG‑‑GGGGGTCTT‑GTTTATAAAGATCATACCCCGCCATATTCATTA                                                          <  SRR4302543.2882064/86‑1 (MQ=60)

                                      CGTTATTTTTTAATCGGGCATGAACTTTCTTAATCCGTTATCGACCA‑GA‑GCG‑GGGGG‑TTT‑TTTTATAAAGATCATACCCCGCCATATTCATTAA                                                         <  SRR4302543.5328051/94‑1 (MQ=46)

                                      CGTTATGTTTTCATCTGGCATGAACATTCTTAATACGTTATCGACCA‑GA‑GCG‑GGGGG‑CTT‑GTTTATAAAGATCATAACCCGCCATATTCATTAA                                                         >  SRR4302543.7251613/1‑94 (MQ=60)

                                      CGTTATGTTTTCATCTGGCATGAACATTCTTAATACGTTATCGACCA‑GA‑GCG‑GGGGG‑CTT‑GTTTATAAAGATCATAACCCGCCATATTCATTAA                                                         >  SRR4302543.5314236/1‑94 (MQ=60)

                                       TTTATGTTTTCATCTGGCATAAACATTCTTAATGCGTTATCGACGA‑GA‑GCG‑GGGGG‑CTT‑GTTTATAAAGATCATACCCCGCCATATTCATTAAC                                                        <  SRR4302543.6090133/94‑1 (MQ=60)

                                       GTTATGTTTTCATCTGGCATGAACATTCTTAATACGTTATCGACCA‑GA‑GCG‑GGGGG‑CTT‑GTTTATAAAGATCATAACCCGCCATATTCATTAAC                                                        >  SRR4302543.4062097/1‑94 (MQ=60)

                                        TTATGTTTTCATCTGGCATGAACATTCTTAATACGTTATCGACCA‑GA‑GCG‑GGGGG‑CTT‑GTTTATAAAGATCATAACCCGCCATATTCATTAACC                                                       >  SRR4302543.5661059/1‑94 (MQ=60)

                                          ATGTTTTCATCTGGCATGAACATTCTTAATACGTTATCGACCA‑GA‑GCG‑GGGGG‑CTT‑GTTTATAAAGATCATAACCCGCCATATTCATTAACCAG                                                     >  SRR4302543.7947661/1‑94 (MQ=60)

                                          ATGTTTTCATCTGGCATGAACATTCTTAATACGTTATCGACCA‑GA‑GCG‑GGGGG‑CTT‑GTTTATAAAGATCATAACCCGCCATATTCATTAACCAG                                                     >  SRR4302543.5346774/1‑94 (MQ=60)

                                          ATGTTTTCATCTGGCATAAACATTCTTAATGCGTTATCGACCA‑GA‑GCG‑GGGGG‑CTT‑GTTTATAAAGATCATAACCCGCCATATTCATTAACCAG                                                     <  SRR4302543.6100556/94‑1 (MQ=60)

                                           TGTTTTCATCTGGCATGAACATTCTTAATACGTTATCGACCA‑GA‑GCG‑GGGGG‑CTT‑GTTTATAAAGATCATAACCCGCCATATTCATTAACCAGT                                                    >  SRR4302543.4773620/1‑94 (MQ=60)

                                           TGTTTTCATCTGGCATGAACATTCTTAATACGTTATCGACCA‑GA‑GCG‑GGGGG‑CTT‑GTTTATAAAGATCATAACCCGCCATATTCATTAACCAGT                                                    >  SRR4302543.4773621/1‑94 (MQ=60)

                                            GTTTTCATCTGGCATGAACATTCTTAATACGTTATCGACCA‑GA‑GCG‑GGGGG‑CTT‑GTTTATAAAGATCATAACCCGCCATATTCATTAACCAGTT                                                   >  SRR4302543.6935415/1‑94 (MQ=60)

                                             TTTTCTTCGGGCATGAACATTATTAATCCGTTATCGACAA‑GG‑GCG‑GGGGG‑TTT‑TTTTAAAAAGATCATACCCCGCCATATTCATTAACCAGTTT                                                  <  SRR4302543.2911278/94‑1 (MQ=28)

                                             TTTTCATCTGGCATGAACATTCTTAATACGTTATCGACCA‑GA‑GCG‑GGGGG‑CTT‑GTTTATAAAGATCATAACCCGCCATATTCATTAACCAGTTT                                                  >  SRR4302543.2128062/1‑94 (MQ=60)

                                              TTTCATCTGGCATGAACATTCTTAATACGTTATCGACCA‑GA‑GCG‑GGGGG‑CTT‑GTTTATAAAGATCATAACCCGCCATATTCATTAACCAGTTTT                                                 >  SRR4302543.4766120/1‑94 (MQ=60)

                                               TTCATCTGGCATGAACATTCTTAATACGTTATCGACCA‑GA‑GCG‑GGGGG‑CTT‑GTTTATAAAGATCATAACCCGCCATATTCATTAACCAGTTTTG                                                >  SRR4302543.763981/1‑94 (MQ=60)

                                               TTCATCTGGCATGAACATTCTTAATACGTTATCGACCA‑GA‑GCG‑GGGGG‑CTT‑GTTTATAAAGATCATAACCCGCCATATTCATTAACCAGTTTTG                                                >  SRR4302543.763982/1‑94 (MQ=60)

                                                TCATCTGGCATGAACATTCTTAATACGTTATCGACCA‑GA‑GCG‑GGGGG‑CTT‑GTTTATAAAGATCATAACCCGCCATATTCATTAACCAGTTTTGA                                               >  SRR4302543.4248026/1‑94 (MQ=60)

                                                TCATCTGACATGAACATTCTTAATACGTTATCGACCA‑GA‑GC‑‑GGGGGTTTT‑GTTTATAAAGATCATACCCCGCCATATTCATTAACCAGTTTTGA                                               <  SRR4302543.5469302/94‑1 (MQ=60)

                                                 tgtcttcgggaaagaacttttttaatcggttaccgccaagggcgGGGGG‑CTT‑TTTTATAAAGATCATACCCCGCCATATTCATTAACCAGTTTT                                                 <  SRR4302543.3928251/50‑1 (MQ=60)

                                                 TATCTGGCAGAAACATTCTTAATACGTTAGCGACCA‑GA‑GG‑‑GGGGGTTTT‑GTTTATAAAGATCAAACCCCGCCATATTCATTAACCAGTTTTGAA                                              <  SRR4302543.4802433/94‑1 (MQ=55)

                                                 CATCTGGCATGAACATTCTTAATTCGTTATCGACCA‑GA‑GCG‑GGGGG‑CTT‑GTTTATAAAGATCATAACCCGCCATATTCATTAACCAGTTTTGAA                                              >  SRR4302543.2252245/1‑94 (MQ=60)

                                                 CATCTGGCATGAACATTCTTAATACGTTATCGACCA‑GA‑GCG‑GGGGG‑CTT‑GTTTATAAAGATCATAACCCGCCATATTCATTAACCAGTTTTGAA                                              >  SRR4302543.1679018/1‑94 (MQ=60)

                                                  ATCTGGCATGAACTTTCTTAATACGTTATCGACCAGGG‑GG‑‑GGGGG‑TTT‑GTTTATAAAGATCATACCCCGCCATATTCATTAACCAGTTTTGAAC                                             <  SRR4302543.5508295/94‑1 (MQ=60)

                                                  ATCTGGCATGAACATTCTTGATACGTTATCGACCA‑GA‑GCG‑GGGGG‑CTT‑GTTTATAAAGATCATAACCCGCCATATTCATTAACCAGTTTTGAAC                                             >  SRR4302543.2590165/1‑94 (MQ=60)

                                                  ATCTGGCATGAACATTCTTAATACGTTATCAACCA‑GA‑GCG‑GGGGG‑CTT‑GTTTATAAAGATCATAACCCGCCATATTCATTAACCAGTTTTGAAC                                             >  SRR4302543.2590164/1‑94 (MQ=60)

                                                  ATCTGCAATGAACATTCTTAATACGTTATCGCCCA‑GA‑GCG‑GGGGG‑TTT‑GTTTATAAAGATCAAACCCCGCCATATTCATTAACCAGTTTTGAAC                                             <  SRR4302543.7417812/94‑1 (MQ=60)

                                                  ATCGGGCATGAACATTATAAATCCGTTATCGACAA‑GA‑GG‑‑GGGGGTTTT‑GTTAATAAAGACAAAAACCCGCCATATTCATTAACCAGTTTTGAAC                                             <  SRR4302543.2657931/94‑1 (MQ=19)

                                                  ATCGGGCATAAACATTCTTAATACGTTATCGACCA‑GAGGG‑‑GGGGG‑CTT‑GTTTATAAAGATCATACCCCGCCATATTCATTAACCAGTTTTGAAC                                             <  SRR4302543.5244076/94‑1 (MQ=60)

                                                   tgtgatatgaccttttttaattctTTATCGACCA‑GAGGG‑‑GGGGG‑TTT‑GTTTATAAAGATAATACCCCGCCATATTCATTAACCAGTTTTGAACA                                            <  SRR4302543.278375/70‑1 (MQ=49)

                                                    CTGGCATGAACATTCTTAATACGTTATCGACCA‑GA‑GCG‑GGGGG‑CTT‑GTTTATAAAGATCATAACCCGCCATATTCATTAACCAGTTTTGAACAA                                           >  SRR4302543.2167968/1‑94 (MQ=60)

                                                    CTGGCATGAACATTCTTAATACGTTATCGACCA‑GA‑GCG‑GGGGG‑CTT‑GTTTATAAAGATCATAACCCGCCATATTCATTAACCAGTTTTGAACAA                                           >  SRR4302543.246511/1‑94 (MQ=60)

                                                    CTGGCATGAACATTCTTAATACGTTATCGACCA‑GA‑GCG‑GGGGG‑CTT‑GTTTATAAAGATCATAACCCGCCATATTCATTAACCAGTTTTGAACAA                                           >  SRR4302543.7343861/1‑94 (MQ=60)

                                                     TGGCATGAACATTTTTAATACGTTATCGACCA‑GA‑GCG‑GGGGG‑CTT‑TTTTATAAAGATCAAACCCCGCCATATTCATTAACCAGTTTTGAACAAT                                          <  SRR4302543.2084042/94‑1 (MQ=60)

                                                     TGGCATAAACATTCTTAATACGTTATCGACCA‑GA‑GCG‑GGGGG‑CTT‑TTTTATAAAGATCATACCCCGCCATATTCATTAACCAGTTTTGAACAAT                                          <  SRR4302543.1956341/94‑1 (MQ=60)

                                                      GGCATGAACATTCTTAATACGTTATCGACCA‑GA‑GCG‑GGGGG‑CTT‑GTTTATAAAGATAATACCCCGCCATATTCATTAACCAGTTTTGAACAATT                                         <  SRR4302543.6850064/94‑1 (MQ=60)

                                                       GCATGACCATTTTTAATACTTTATCGACCA‑GA‑GCG‑GGGGG‑CTT‑TTTTATAAAGATCATACCCCGCCATATTCATTAACCAGTTTTGAACAATTC                                        <  SRR4302543.593014/94‑1 (MQ=60)

                                                       GCATGAACATTTTTAATACGTTATCGACCA‑GA‑GCG‑GGGGG‑TTT‑GTTTATAAAGATCATAACCCGCCATATTCATTAACCAGTTTTGAACAATTC                                        <  SRR4302543.6445276/94‑1 (MQ=60)

                                                        GATGAACATTCTTAATACGTTATCGACCA‑GAGGG‑‑GGGGG‑CTT‑GTTTATAAAGATCAAAACCCGCCATATTCATTAACCAGTTTTGAACAATTCC                                       <  SRR4302543.4763261/94‑1 (MQ=60)

                                                        CATGAACATTCTTAATACGTTATCGACCA‑GA‑GCG‑GGGGG‑CTT‑GTTTATAAAGATCATACCCCGCCATATTCATTAACCAGTTTTGAACAATTCC                                       <  SRR4302543.2330957/94‑1 (MQ=60)

                                                        CATGAACATTCTTAATACGTTATCGACCA‑GA‑GCG‑GGGGG‑CTT‑GTTTATAAAGATCATAACCCGCCCTATTCATTAACCAGTTTTGAACCATTCC                                       >  SRR4302543.5940131/1‑94 (MQ=60)

                                                        CATGAACATTCTTAATACGTTATCGACCA‑GA‑GCG‑GGGGG‑CTT‑GTTTATAAAGATCATAACCCGCCATATTCATTAACCAGTTTTGAACAATTCC                                       >  SRR4302543.5940130/1‑94 (MQ=60)

                                                        CATAAACATTCTTAATACGTTATCGACCA‑GA‑GCG‑GGGGG‑CTT‑GTTTATAAAGATCATAACCCGCCATATTCATTAACCAGTTTTGAACAATTCC                                       >  SRR4302543.4025316/1‑94 (MQ=60)

                                                         ATGAACATTCTTAATACGTTATCGACCA‑GA‑GCG‑GGGGG‑CTT‑GTTTATAAAGATCATAACCCGCCATATTCATTAACCAGTTTTGAACAATTCCG                                      >  SRR4302543.6818700/1‑94 (MQ=60)

                                                         ATGAACATTCTTAATACGTTATCGACCA‑GA‑GCG‑GGGGG‑CTT‑GTTTATAAAGATCATAACCCGCCATATTCATTAACCAGTTTTGAACAATTCCG                                      >  SRR4302543.6291485/1‑94 (MQ=60)

                                                          TGAACATTCTTAATACGTTATCGACCA‑GA‑GCG‑GGGGG‑CTT‑GTTTATAAAGATCATAACCCGCCATATTCATTAACCAGTTTTGAACAATTCCGC                                     >  SRR4302543.3611043/1‑94 (MQ=60)

                                                          TGAACATTCTTAATACGTTATCGACCA‑GA‑GCG‑GGGGG‑CTT‑GTTTATAAAGATCATAACCCGCCATATTAATTAACCAGTTTTTACCAATTCCTC                                     >  SRR4302543.3911154/1‑94 (MQ=60)

                                                           GAACATTTTTAATACGTTATCGCCCA‑GA‑GCG‑GGGGG‑CTT‑GTTTATAAAGATAATAACCCGCCATATTCATTAACCAGTTTTGAACAATTCCGCT                                    <  SRR4302543.7942742/94‑1 (MQ=60)

                                                           AAACATTCTTAATACGTTATCGACCA‑GA‑GCG‑GGGGG‑CTT‑GTTTATAAAGATCATACCCCGCCATATTCATTAACCAGTTTTGAACAATTCCGCT                                    <  SRR4302543.1199324/94‑1 (MQ=60)

                                                            AACATTCTTAATACGTTATCGACCA‑GA‑GCG‑GGGGG‑CTT‑GTTTATAAAGATCATAACCCGCCATATTCATTAACCAGTTTTGAACAATTCCGCTG                                   >  SRR4302543.8009949/1‑94 (MQ=60)

                                                             ACATTCTTAATACGTTATCGACCA‑GA‑GCG‑GGGGG‑CTT‑GTTTATAAAGATCATAACCCGCCATATTCATTAACCAGTTTTGAACAATTCCGCTGA                                  >  SRR4302543.5221937/1‑94 (MQ=60)

                                                              CATTCTTAATACGTTATCGACCA‑GA‑GCG‑GGGGG‑CTT‑GTTTATAAAGATCATAACCCGCCATATTCATTAACCAGTTTTGAACAATTCCGCTGAA                                 >  SRR4302543.4043808/1‑94 (MQ=60)

                                                              CATTCTTAATACGTTATCGACCA‑GA‑GC‑‑GGGGGTCTT‑GTTTATAAAGATCATACCCCGCCATATTCATTAACCAGTTTTGAACAATTCCGCTGAA                                 <  SRR4302543.2257823/94‑1 (MQ=60)

                                                               ttttTTAATACTTTAGCGACCA‑GG‑GC‑‑GGGGGTTTT‑GTTTATAAAGATCATAACCCGCCATATTCATTAACCAGTTTTGAACAATTCCGCTGAAG                                <  SRR4302543.1848715/90‑1 (MQ=60)

                                                               TTTCTTAATACGTTATCGACCA‑GA‑GG‑‑GGGGGTTTT‑TTTTATAAAGATCATAACCCGCCATATTCATTAACCAGTTTTGAACAATTCCGCTGAAG                                <  SRR4302543.6220417/94‑1 (MQ=60)

                                                               ATTCTTAATACGTTATCGGCCA‑GA‑GCG‑GGGGG‑CTT‑GTTTATAAAGATCATAACACGCCATATTCATTACCCAGTTTTGAACAATTCGGCTGAAG                                >  SRR4302543.2650356/1‑94 (MQ=60)

                                                               ATTCTTAATACGTTATCGACCA‑GA‑GCG‑GGGGG‑CTT‑GTTTATAAAGATCATAACCCGCCATATTCATTAACCAGTTTTGAACAATTCCGCTGAAG                                >  SRR4302543.2662213/1‑94 (MQ=60)

                                                               ATTCTAAATACGTTATCGACAA‑GA‑GC‑‑GGGGGTCTT‑GTTTATAAAGATCATACCCCGCCATATTCATTAACCAGTTTTGAACAATTCCGCTGAAG                                <  SRR4302543.3011867/94‑1 (MQ=60)

                                                                TTCTTAATACGTTATCGACCA‑GAGGG‑‑GGGGG‑TTT‑GTTTAAAAAGATCATAACCCGCCATATTCATTAACCAGTTTTGAACAATTCCGCTGAAGG                               <  SRR4302543.116891/94‑1 (MQ=60)

                                                                 TTTTAATACGTTATCGACCA‑GA‑GCG‑GGGGG‑CTT‑GTTTATAAAGATCATAACCCGCCATATTCATTAACCAGTTTTGAACAATTCCGCTGAAGGC                              <  SRR4302543.6086868/94‑1 (MQ=60)

                                                                 TCTTAATACGTTATCGACCAGGG‑GG‑‑GGGGG‑CTT‑GTTTATAAAGATAATACCCCGCCATATTCATTAACCAGTTTTGAACAATTCCGCTGAAGGC                              <  SRR4302543.4279195/94‑1 (MQ=60)

                                                                 TCTTAATACGTTATCGACCA‑GAGGG‑‑GGGGG‑TTT‑GTTTATAAAGATCATACCCCGCCATATTCATTAACCAGTTTTGAACAATTCCGCTGAAGGC                              <  SRR4302543.4279193/94‑1 (MQ=60)

                                                                   TTAATACTTTATCGACCA‑GA‑GG‑‑GGGGGTTTT‑TTTTATAAAGATCATACCCCGCCATATTCATTAACCAGTTTTGAACAATTCCGCTGAAGGCAC                            <  SRR4302543.84836/94‑1 (MQ=60)

                                                                    taattacttttcagacagGA‑GC‑‑GGGGGTCTT‑GTTTAAAAAAATAATACCCCGCCATATTCATTAACCAGTTTTGAACAATTCCGCTGAAGGCAC                            <  SRR4302543.4591276/76‑1 (MQ=60)

                                                                    TAATCCGTGATCGCCCA‑GA‑GCG‑GGGGG‑CTT‑TTTTATAAAGATCATACCCCGCCATATTCATTAACCAGTTTTGAACAATTCCGCTGAAGGCACC                           <  SRR4302543.2142803/94‑1 (MQ=60)

                                                                    TAATACGTTATCGACCA‑GA‑GCGGGGGGG‑CTT‑GTTTATAAAGATCATAACCCGCCATATTCATTAACCAGTTTTGAACAATTCCGCTGAAGGCAC                            >  SRR4302543.5414062/1‑94 (MQ=60)

                                                                    TAATACGTTATCAACCA‑GA‑GCG‑GGGGG‑CTT‑GTTTATAAAGTTCATAACCCGCCATATTCATTAACAAGTTTTGAACAATTCCGCTGAAGGAACC                           >  SRR4302543.3982863/1‑94 (MQ=60)

                                                                     AATACGTTATCGCCCA‑GA‑GCG‑GGGGG‑TTT‑GTTTATAAAGATCATACCCCGCCATATTCATTAACCAGTTTTGAACAATTCCGCTGAAGGCACCA                          <  SRR4302543.7230545/94‑1 (MQ=60)

                                                                     AATACGTTATCGACCA‑GA‑GCG‑GGGGG‑CTT‑GTTTATAAAGATCATAACCCGCCATATTCATTAACCAGTTTTGAACAATTCCGCTGAAGGCACCA                          >  SRR4302543.4859693/1‑94 (MQ=60)

                                                                       TGCGTGATCGACCA‑GA‑GCG‑GGGGG‑CTT‑GTTTATAAAGATCATAACCCGCCATATTCATTAACCAGTTTTGAACAATTCCGCTGAAGGCACCATC                        <  SRR4302543.6100093/94‑1 (MQ=60)

                                                                       TCCGTTATCGACCA‑GA‑GCG‑GGGGG‑TTT‑GTTTATAAAGATCATACCCCGCCATATTCATTAACCAGTTTTGAACAATTCCGCTGAAGGCACCATC                        <  SRR4302543.7543918/94‑1 (MQ=60)

                                                                       TACGTTAGCGACAA‑GA‑GG‑‑GGGGGTCTT‑GTTAATAAACACCATACCCCGCCATATTCATTAACCAGTTTTGAACAATTCCGCTGAAGGCACCATC                        <  SRR4302543.3099699/94‑1 (MQ=57)

                                                                       AACGTTATCGACCA‑GA‑GCG‑GGGGG‑TTT‑GTTTATAAAGATCATAACCCGCCATATTCATTAACCAGTTTTGAACAATTCCGCTGAAGGCACCATC                        <  SRR4302543.6774284/94‑1 (MQ=60)

                                                                        aatacgtatgggacaggggcgGGGGG‑TTT‑GTTTATAAAAATAATACCCCGCCATATTCATTAACCAGTTTTGAACAATTCCGCTGAAGGCACCA                          <  SRR4302543.524183/73‑1 (MQ=60)

                                                                          GTTATCGACCA‑GG‑GG‑‑GGGGGTTTT‑GTTTATAAAGATCATACCCCGCCATATTCATTAACCAGTTTTGAACAATTCCGCTGAAGGCACCATCAAT                     <  SRR4302543.3651846/94‑1 (MQ=60)

                                                                          GTTATCGACCA‑GA‑GCG‑GGGGG‑CTT‑GTTTATAAAGATCATAACCCGCCATATTCATTAACCAGTTTTGAACAATTCCGCTGAAGGCACCATCAAT                     >  SRR4302543.4491956/1‑94 (MQ=60)

                                                                          GTTACCGACCA‑GA‑GCG‑GGGGG‑CTT‑GTTTATAAAGATCATACCCCGCCATATTCATTAACCAGTTTTGAACAATTCCGCTGAAGGCACCATCAAT                     <  SRR4302543.5067345/94‑1 (MQ=60)

                                                                           TTATCGACCA‑GA‑GCG‑GGGGG‑CTT‑GTTTATAAAGATCATAACCCGCCATATTCATTAACCAGTTTTGAACAATTCCGCTGAAGGCACCATCAATA                    >  SRR4302543.4348925/1‑94 (MQ=60)

                                                                               acgcccgGA‑GC‑‑GGGGG‑CTTGGTGTATAAAGATCATACCCCGCCATATTCATTAACCAGTTTTGAACAATTCCGCTGAAGGCACCATCAATAATA                 <  SRR4302543.5661638/87‑1 (MQ=60)

                                                                               CGACCA‑GA‑GCG‑GGGGG‑CTT‑GTTTATAAAGATCATAACCCGCCATATTCATTAACCAGTTTTGAACAATTCCGCTGAAGGCACCATCAATAATAA                >  SRR4302543.6210319/1‑94 (MQ=60)

                                                                                GACCA‑GG‑GCG‑GGGGG‑CTT‑TTTTAAAAAGATCATACCCCGCCATATTCATTAACCAGTTTTGAACAATTCCGCTGAAGGCACCATCAATAATAAT               <  SRR4302543.1566673/94‑1 (MQ=60)

                                                                                 GCCA‑GA‑GCG‑GGGGG‑CTT‑GTTTATAAAGATCAAGTCCCGCCATATTCATTAACCAGTTTTGAACAATTCCGCTGAAGGCACCATCAATAATAATC              <  SRR4302543.1349234/94‑1 (MQ=60)

                                                                                   CA‑GA‑GCG‑GGGGG‑TTT‑TTTTATAAAGATCATACCCCGCCATATTCATTAACCAGTTTTGAACAATTCCGCTGAAGGCACCATCAATAATAATCAT            <  SRR4302543.4174383/94‑1 (MQ=60)

                                                                                      GA‑GCG‑GGGGG‑CTT‑TTTTATAAAGATCATACCCCGCCATATTCATTAACCAGTTTTGAACAATTCCGCTGAAGGCACCATCAATAATAATCATCA          <  SRR4302543.3314773/94‑1 (MQ=60)

                                                                                         ggcgGGGGG‑CTT‑GTTAATAAAGATCACAACCCGCCATATTCATTAACCAGTTTTGAACAATTCCGCTGAAGGCACCATCAATAATAATCATCAC         <  SRR4302543.2501482/90‑1 (MQ=60)

                                                                                          gcgGGGGG‑TTT‑GTTAATAAAAATCATACCCCGCCATATTCATTAACCAGTTTTGAACAATTCCGCTGAAGGCACCATCAATAATAATCATCACA        <  SRR4302543.4060336/91‑1 (MQ=60)

                                                                                          G‑‑GGGGG‑CTT‑GTTTATAAAGATCATAACCCGCCATATTCATTAACCAGTTTTGAACAATTCCGCTGAAGGCACCATCAATAATAATCATCACAAC      >  SRR4302543.3075911/1‑94 (MQ=60)

                                                                                          G‑‑GGGGG‑CTT‑GTTTATAAAGATCATAACCCGCCATATTCATTAACCAGTTTTGAACAATTCCGCTGAAGGCACCATCAATAATAATCATCACAAC      >  SRR4302543.687528/1‑94 (MQ=60)

                                                                                           cgGGGGG‑CTT‑GTTTATAAAGATCATAACCCGCCATATTCATTAACCAGTTTTGAACAATTCCGCTGAAGGCACCATCAATAATAATCATCACAA       >  SRR4302543.3805487/3‑94 (MQ=60)

                                                                                              GGGG‑CTT‑GTTTATAAAGATCATAACCCGCCATATTCATTAACCAGTTTTGAACAATTCCGCTGAAGGCACCATCAATAATAATCATCACAACAT    >  SRR4302543.3684255/1‑94 (MQ=60)

                                                                                               GGG‑CTT‑GTTTATAAAGATCATAACCCGCCATATTCATTAACCAGTTTTGAACAATTCCGCTGAAGGCACCATCAATAATAATCATCACAACATC   >  SRR4302543.199794/1‑94 (MQ=60)

                                                                                               GGG‑CTT‑GTTTATAAAGATCATAACCCGCCATATTCATTAACCAGTTTTGAACAATTCCGCTGAAGGCACCATCAATAATAATCATCACAACATC   >  SRR4302543.553612/1‑94 (MQ=60)

                                                                                                GG‑CTT‑TTTTATAAAGATCATACCCCGCCATATTCATTAACCAGTTTTGAACAATTCCGCTGAAGGCACCATCAATAATAATCATCACAACATCT  <  SRR4302543.4587870/94‑1 (MQ=60)

                                                                                                GG‑CTT‑GTTTATAAAGATCATAACCCGCCATATTCATTAACCAGTTTTGAACAATTCCGCTGAAGGCACCATCAATAATAATCATCACAACATCT  >  SRR4302543.3441231/1‑94 (MQ=60)

                                                                                                GG‑CTT‑GTTTATAAAGATCATAACCCGCCATATTCATTAACCAGTTTTGAACAATTCCGCTGAAGGCACCATCAATAATAATCATCACAACATCT  >  SRR4302543.3483500/1‑94 (MQ=60)

                                                                                                GG‑CTT‑GTTTATAAAGATCATAACCCGCCATATTCATTAACCAGTTTTGAACAATTCCGCTGAAGGCACCATCAATAATAATCATCACAACATCT  >  SRR4302543.3483501/1‑94 (MQ=60)

TACATGACACTTAATTCATTCGTTTGATGAATTAATTTCGTTATGTTTTCATCTGGCATGAACATTCTTAATACGTTATCGACCA‑GA‑GC‑‑GGGGG‑CTT‑GTTTATAAAGATCATAACCCGCCATATTCATTAACCAGTTTTGAACAATTCCGCTGAAGGCACCATCAATAATAATCATCACAACATCT  >  NC_000913/3410441‑3410626

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 0 ≤` `ATCG/ATCG` `< 2 ≤` `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 32 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`