Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.

ALE, Flask, Isolate	Predicted Mutations	Mean Coverage	Total Reads	Percent Mapped	Mapped Reads	Average Read Length
A1 F1 I1 R1	1696	279.3	15874187	97.8%	15524954	93.0

Breseq alignment

BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	3,414,746	G→A	A693T (GCC→ACC)	acrF →	AcrF

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	3,414,746	0	G	A	99.0%	1053.9 / NA	313	A693T (GCC→ACC)	acrF	AcrF
Reads supporting (aligned to +/- strand): ref base G (0/1); major base A (151/158); minor base C (0/3); total (151/162)
Fisher's exact test for biased strand distribution p-value = 2.48e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 327 total aligned reads displayed.

ATTCCATTCAATATGCCAGCCATTGTTGAACTGGGCACGGCAACGGGTTTCGACTTTGAGTTAATTGATCAGGCTGGGCTGGGTCACGATGCCCTAACCCAGGCCCGTAACCAGTTGCTTGGTATGGCGGCGCAACATCCTGCCAGCTTAGTCAGCGTGCGCCCTAATGGCCTGGAAGAC  >  NC_000913/3414656‑3414835

attccattcAATATGCCAGCCATTGTTGAACTGGGCACGGCAACGGGTTTCGACTTTGAGTTAATTGATCAGGCTGGGCTGGGTCACGATAcc                                                                                         >  2:4450076/1‑93 (MQ=255)

attccattcAATATGCCAGCCATTGTTGAACTGGGCACGGCAACGGGTTTCAACTTTGAGTTAATTGATCAGGCTGGGCTGGGTCACGATAcc                                                                                         <  2:6807591/93‑1 (MQ=255)

 ttccattcAATATGCCAGCCATTGTTGAACTGGGCACGGCAACGGGTTTCGACTTTGAGTTAATTGATCAGGCTGGGCTGGGTCACGATAccc                                                                                        <  1:4157135/93‑1 (MQ=255)

 ttccattcAATATGCCAGCCATTGTTGAACTGGGCACGGCAACGGGTTTCGACTTTGAGTTAATTGATCAGGCTGGGCTGGGTCACGATAccc                                                                                        >  2:195014/1‑93 (MQ=255)

    cattcAATATGCCAGCCATTGTTGAACTGGGCACGGCAACGGGTTTCGACTTTGAGTTAATTGATCAGGCTGGGCTGGGTCACGATACCCTaa                                                                                     >  1:1030614/1‑93 (MQ=255)

     attcAATATGCCAGCCATTGTTGAACTGGGCACGGCAACGGGTTTCGACTTTGAGTTAATTGATCAGGCTGGGCTGGGTCACGATACCCTAAc                                                                                    >  1:920825/1‑93 (MQ=255)

     attcAATATGCCAGCCATTGTTGAACTGGGCACGGCAACGGGTTTCGACTTTGAGTTAATTGATCAGGCTGGGCTGGGTCACGATACCCTAAc                                                                                    >  2:496718/1‑93 (MQ=255)

      ttcAATATGCCAGCCATTGTTGAACTGGGCACGGCAACGGGTTTCGACTTTGAGTTAATTGATCAGGCTGGGCTGGGTCACGATACCCTAAcc                                                                                   >  2:2192832/1‑93 (MQ=255)

       tcAATATGCCAGCCATTGTTGAACTGGGCACGGCAACGGGTTTCGACTTTGAGTTAATTGATCAGGCTGGGCTGGGTCACGATACCCTAAccc                                                                                  <  1:1570597/93‑1 (MQ=255)

       tcAATATGCCAGCCATTGTTGAACTGGGCACGGCAACGGGTTTCGACTTTGAGTTAATTGATCAGGCTGGGCTGGGTCACGATACCCTAAccc                                                                                  <  2:5608650/93‑1 (MQ=255)

       tcAATATGCCAGCCATTGTTGAACTGGGCACGGCAACGGGTTCCGACTTTGAGTTAATTGATCAGGCTGGGCTGGGTCACGATACCCTAAccc                                                                                  >  2:4472533/1‑93 (MQ=255)

        cAATATGCCAGCCATTGTTGAACTGGGCACGGCAACGGGTTTCGACTTTGAGTTAATTGATCAGGCTTGGCTGGGTCACGATACCCTAACCCa                                                                                 >  2:3580500/1‑93 (MQ=255)

        cAATATGCCAGCCATTGTTGAACTGGGCACGGCAACGGGTTTCGACTTTGAGTTAATTGATCAGGCTGGGCTGGGTCACGATACCCTAACCCa                                                                                 <  2:6694827/93‑1 (MQ=255)

        cAATATGCCAGCCATTGTTGAACTGGGCACGGCAACGGGTTTCGACTTTGAGTTAATTGATCAGGCTGGGCTGGGTCACGATACCCTAACCCa                                                                                 <  1:7545431/93‑1 (MQ=255)

         aaTATGCCAGCCATTGTTGAACTGGGCACGGCAACGGGTTTCGACTTTGAGTTAATTGATCAGGCTGGGCTGGGTCACGATACCCTAACCCAg                                                                                <  1:1082757/93‑1 (MQ=255)

         aaTATGCCAGCCATTGTTGAACTGGGCACGGCAACGGGTTTCGACTTTGAGTTAATTGATCAGGCTGGGCTGGGTCACGATACCCTAACCCAg                                                                                >  2:6972844/1‑93 (MQ=255)

         aaTATGCCAGCCATTGTTGAACTGGGCACGGCAACGGGTTTCGACTTTGAGTTAATTGATCAGGCTGGGCTGGGTCACGATACCCTAACCCAg                                                                                >  1:3242811/1‑93 (MQ=255)

          atatGCCAGCCATTGTTGAACTGGGCACGGCAACGGGTTTCGACTTTGAGTTAATTGATCAGGCTGGGCTGGGTCACGATACCCTAACCCAgg                                                                               >  2:1190387/1‑93 (MQ=255)

          atatGCCAGCCATTGTTGAACTGGGCACGGCAACGGGTTTCGACTTTGAGTTAATTGATCAGGCTGGGCTGGGTCACGATACCCTAACCCAgg                                                                               >  1:2010341/1‑93 (MQ=255)

           tatGCCAGCCATTGTTGAACTGGGCACGGCAACGGGTTTCGACTTTGAGTTAATTGATCAGGCTGGGCTGGGTCACGATACCCTAACCCAGGc                                                                              >  2:3811037/1‑93 (MQ=255)

            atGCCAGCCATTGTTGAACTGGGCACGGTAACGGGTTTCGACTTTGAGTTAATTGATCAGGCTGGGCTGGGGCACGATACCCTAACCCAGGcc                                                                             >  2:3016636/1‑93 (MQ=255)

             tGCCAGCCATTGTTGAACTGGGCACGGCAACGGGTTTCGACTTTGAGTTAATTGATCAGGCTGGGCTGGGTCACGATACCCTAACCCAGGccc                                                                            <  1:3394303/93‑1 (MQ=255)

             tGCCAGCCATTGTTGAACTGGGCACGGCAACGGGTTTCGACTTTGAGTTAATTGATCAGGCTGGGCTGGGTCACGATACCCTAACCCAGGccc                                                                            >  1:4049503/1‑93 (MQ=255)

             tGCCAGCCATTGTTGAACTGGGCACGGCAACGGGTTTCGACTTTGAGTTAATTGATCAGGCTGGGCTGGGTCACGATACCCTAACCCAGGccc                                                                            >  2:3983887/1‑93 (MQ=255)

              gccagccaTTGTTGAACTGGGCACGGCAACGGGTTTCGACTTTGAGTTAATTGATCAGGCTGGGCTGGGTCACGATACCCTAACCCAGGCCCg                                                                           <  1:2491060/93‑1 (MQ=255)

               ccagccaTTGTTGAACTGGGCACGGCAACGGGTTTCGACTTTGAGTTAATTGATCAGGCTGGGCTGGGTCACGATACCCTAACCCAGGCCCGt                                                                          <  2:4168488/93‑1 (MQ=255)

                cagccaTTGTTGAACTGGGCACGGCAACGGGTTTCGACTTTGAGTTAATTGATCAGGCTGGGCTGGGTCACGATACCCTAACCCAGGCCCGTa                                                                         >  2:7736911/1‑93 (MQ=255)

                  gccaTTGTTGAACTGGGCACGGCAACGGGTTTCGACTTTGAGTTAATTGATCAGGCTGGGCTGGGTCACGATACCCTAACCCAGGCCCGTAAc                                                                       <  1:2854418/93‑1 (MQ=255)

                   ccaTTGTTGAACTGGGCACGGCAACGGGTTTCGACTTTGAGTTAATTGATCAGGCTGGGCTGGGTCACGATACCCTAACCCAGGCCCGTAAcc                                                                      >  2:2301070/1‑93 (MQ=255)

                    caTTGTTGAACTGGGCACGGCAACGGGTTTCGACTTTGAGTTAATTGATCAGGCTGGGCTGGGTCACGATACCCTAACCCAGGCCCGTAACCa                                                                     <  1:2304399/93‑1 (MQ=255)

                      ttgttgAACTGGGCACGGCAACGGGTTTCGACTTTGAGTTAATTGATCAGGCTGGGCTGGGTCACGATACCCTAACCCAGGCCCGTAACCAGt                                                                   >  1:4652585/1‑93 (MQ=255)

                      ttgttgAACTGGGCACGGCAACGGGTTTCGACTTTGAGTTAATTGATCAGGCTGGGCTGGGTCACGATACCCTAACCCAGGCCCGTAACCAGt                                                                   <  2:1424332/93‑1 (MQ=255)

                      ttgttgAACTGGGCACGGCAACGGGTTTCGACTTTGAGTTAATTGATCAGGCTGGGCTGGGTCACGATACCCTAACCCAGGCCCGTAACCAGt                                                                   >  1:4413228/1‑93 (MQ=255)

                      ttgttgAACTGGGCACGGCAACGGGTTTCGACTTTGAGTTAATTGATCAGGCTGGGCTGGGTCACGATACCCTAACCCAGGCCCGTAACCAGt                                                                   >  1:1152747/1‑93 (MQ=255)

                        gttgAACTGGGCACGGCAACGGGTTTCGACTTTGAGTTAATTGATCAGGCTGGGCTGGGTCACGATACCCTAACCCAGGCCCGTAACCAGTTg                                                                 >  1:1918502/1‑93 (MQ=255)

                          tgAACTGGGCACGGCAACGGGTTTCGACTTTGAGTTAATTGATCAGGCTGGGCTGGGTCACGATACCCTAACCCAGGCCCGTAACCAGTTGCt                                                               <  1:676577/93‑1 (MQ=255)

                           gAACTGGGCACGGCAACGGGTTTCGACTTTGAGTTAATTGATCAGGCTGGGCTGGGTCACGATACCCTAACCCAGGCCCGTAACCAGTTGCtt                                                              <  1:4445551/93‑1 (MQ=255)

                            aaCTGGGCACGGCAACGGGTTTCGACTTTGAGTTAATTGATCAGGCTGGGCTGGGTCACGATACCCTAACCCAGGCCCGTAACCAGTTGCTTg                                                             >  2:6054314/1‑93 (MQ=255)

                             aCTGGGCACGGCAACGGGTTTCGACTTTGAGTTAATTGATCAGGCTGGGCTGGGTCACGATACCCTAACCCAGGCCCGTAACCAGTTGCTTgg                                                            <  1:4127036/93‑1 (MQ=255)

                             aCTGGGCACGGCAACGGGTTTCGACTTTGAGTTAATTGATCAGGCTGGGCTGGGTCACGATACCCTAACCCAGGCCCGTAACCAGTTGCTTgg                                                            <  1:3549815/93‑1 (MQ=255)

                               tGGGCACGGCAACGGGTTTCGACTTTGAGTTAATTGATCAGGCTGGGCTGGGTCACGATACCCTAACCCAGGCCCGTAACCAGTTGCTTGGTa                                                          <  2:706594/93‑1 (MQ=255)

                               tGGGCACGGCAACGGGTTTCGACTTTGAGTTAATTGATCAGGCTGGGCTGGGTCACGATACCCTAACCCAGGCCCGTAACCAGTTGCTTGGTa                                                          <  1:6197789/93‑1 (MQ=255)

                               tGGGCACGGCAACGGGTTTCGACTTTGAGTTAATTGATCAGGCTGGGCTGGGTCACGATACCCTAACCCAGGCCCGTAACCAGTTGCTTGGTa                                                          <  2:3095499/93‑1 (MQ=255)

                               tGGGCACGGCAACGGGTTTCGACTTTGAGTTAATTGATCAGGCTGGGCTGGGTCACGATACCCTAACCCAGGCCCGTAACCAGTTGCTTGGTa                                                          <  2:2550512/93‑1 (MQ=255)

                               tGGGCACGGCAACGGGTTTCGACTTTGAGTTAATTGATCAGGCTGGGCTGGGTAACGATACCCTAACCCAGGCCCGTAACCAGTTGCTTGGTa                                                          >  2:842477/1‑93 (MQ=255)

                               tGGGCACGGCAACGGGTTTCGACGTTGAGTTAATTGATCAGGCTGGGCTGGGTCACGATACCCTAACCCAGGCCCGTAACCAGTTGCTTGGTa                                                          <  2:4303880/93‑1 (MQ=255)

                                gggCACGGCAACGGGTTTCGACTTTGAGTTAATTGATCAGGCTGGGCTGGGTCACGCTACCCTTACCCAGGCCCGTAACCAGTTGCTTGGGAt                                                         >  2:6413133/1‑93 (MQ=37)

                                gggCACGGCAACGGGTTTCGACTTTGAGTTAATTGATCAGGCTGGGCTGGGTCACGATACCCTAACCCAGGCCCGTAACCAGTTGCTTGGTAt                                                         <  1:3671917/93‑1 (MQ=255)

                                  gCACGGCAACGGGTTTCGACTTTGAGTTAATTGATCAGGCTGGGCTGGGTCACGATACCCTAACCCAGGCCCGTAACCAGTTGCTTGGTATgg                                                       <  2:3472537/93‑1 (MQ=255)

                                   cACGGCAACGGGTTTCGACTTTGAGTTAATTGATCAGGCTGGGCTGGGTCACGATACCCTAACCCAGGCCCGTAACCAGTTGCTTGGTATggc                                                      <  1:3103766/93‑1 (MQ=255)

                                   cACGGCAACGGGTTTCGACTTTGAGTTAATTGATCAGGCTGGGCTGGGTCACGATACCCTAACCCAGGCCCGTAACCAGTTGCTTGGTATggc                                                      <  1:7608897/93‑1 (MQ=255)

                                    aCGGCAACGGGTTTCGACTTTGAGTTAATTGATCAGGCTGGGCTGGGTCACGATACCCTAACCCAGGCCCGTAACCAGTTGCTTGGTATggcg                                                     >  1:2426659/1‑93 (MQ=255)

                                         aaCGGGTTTCGACTTTGAGTTAATTGATCAGGCTGGGCTGGGTCACGATACCCTAACCCAGGCCCGTAACCAGTTGCTTGGTATGGCGGCGCa                                                >  1:7772767/1‑93 (MQ=255)

                                          aCGGGTTTCGACTTTGAGTTAATTGATCAGGCTGGGCTGGGTCACGATACCCTAACCCAGGCCCGTAACCAGTTGCTTGGTATGGCGGCGCaa                                               <  1:6524450/93‑1 (MQ=255)

                                          aCGGGTTTCGACTTTGAGTTAATTGATCAGGCTGGGCTGGGTCACGATACCCTAACCCAGGCCCGTAACCAGTTGCTTGGTATGGCGGCGCaa                                               >  2:3295503/1‑93 (MQ=255)

                                          aCGGGTTTCGACTTTGAGTTAATTGATCAGGCTGGGCTGGGTCACGATACCCTAACCCAGGCCCGTAACCAGTTGCTTGGTATGGCGGCGCaa                                               <  1:2973273/93‑1 (MQ=255)

                                           cGGGTTTCGACTTTGAGTTAATTGATCAGGCTGGGCTGGGTCACGATACCCTAACCCAGGCCCGTAACCAGTTGCTTGGTATGGCGGCGCAAc                                              <  1:1936671/93‑1 (MQ=255)

                                           cGGGTTTCGACTTTGAGTTAATTGATCAGGCTGGGCTGGGTCACGATACCATAACCCAGGCCCGTAACCAGTTGCTTGGTATGGCGGCGCAAc                                              <  1:7414409/93‑1 (MQ=255)

                                             ggTTTCGACTTTGAGTTAATTGATCAGGCTGGGCTGGGTCACGATACCCTAACCCAGGCCCGTAACCAGTTGCTTGGTATGGCGGCGCAACAt                                            >  1:5154819/1‑93 (MQ=255)

                                              gTTTCGACTTTGAGTTAATTGATCAGGCTGGGCTGGGTCACGATACCCTAACCCAGGCCCGTAACCAGTTGCTTGGTATGGCGGCGCAACATc                                           <  2:1660060/93‑1 (MQ=255)

                                              gTTTCGACTTTGAGTTAATTGATCAGGCTGGGCTGGGTCACGATACCCTAACCCAGGCCCGTAACCAGTTGCTTGGTATGGCGGCGCAACATc                                           >  2:7146570/1‑93 (MQ=255)

                                               tttCGACTTTGAGTTAATTGATCAGGCTGGGCTGGGTCACGATACCCTAACCCAGGCCCGTAACCAGTTGCTTGGTATGGCGGCGCAACATcc                                          <  2:6168072/93‑1 (MQ=255)

                                               tttCGACTTTGAGTTAATTGATCAGGCTGGGCTGGGTCACGATACCCTAACCCAGGCCCGTAACCAGTTGCTTGGTATGGCGGCGCAACATcc                                          <  1:6968566/93‑1 (MQ=255)

                                                ttCGACTTTGAGTTAATTGATCAGGCTGGGCTGGGTCACGATACCCTAACCCAGGCCCGTAACCAGTTGCTTGGTATGGCGGCGCAACATCCt                                         <  1:1841589/93‑1 (MQ=255)

                                                 tCGACTTTGAGTTAATTGATCAGGCTGGGCTGGGTCACGATACCCTAACCCAGGCCCGTAACCAGTTGCTTGGTATGGCGGCGCAACATCCTg                                        <  2:1741819/93‑1 (MQ=255)

                                                   gACTTTGAGTTAATTGATCAGGCTGGGCTGGGTCACGATACCCTAACCCAGGCCCGTAACCAGTTGCTTGGTATGGCGGCGCAACATCCTGcc                                      <  1:4526722/93‑1 (MQ=255)

                                                   gACTTTGAGTTAATTGATCAGGCTGGGCTGGGTCACGATACCCTAACCCAGGCCCGTAACCAGTTGCTTGGTATGGCGGCGCAACATCCTGcc                                      >  1:7448028/1‑93 (MQ=255)

                                                    aCTTTGAGTTAATTGATCAGGCTGGGCTGGGTCACGATACCCTAACCCAGGCCCGTAACCAGTTGCTTGGTATGGCGGCGCAACATCCTGCCa                                     >  1:478730/1‑93 (MQ=255)

                                                      tttGAGTTAATTGATCAGGCTGGGCTGGGTCACGATACCCTAACCCAGGCCCTAAACCAGTTGCTTGTTATGGCGGCGCAACATCCTGCCCGc                                   >  1:1259779/1‑93 (MQ=255)

                                                      tttGAGTTAATTGATCAGGCTGGGCTGGGTCACGATACACTAACCCAGGCCCGTAACCAGTTGCTTGGTATGGCGGCGCAACATCCTGCCAGc                                   >  1:4703187/1‑93 (MQ=255)

                                                           gTTAATTGATCAGGCTGGGCTGGGTCACGATACCCTAACCCAGGCCCGTAACCAGTTGCTTGGTATGGCGGCGCAACATCCTGCCAGCTTAGt                              <  1:4215181/93‑1 (MQ=255)

                                                           gTTAATTGATCAGGCTGGGCTGGGTCACGATACCCTAACCCAGGCCCGTAACCAGTTGCTTGGTATGGCGGCGCAACATCCTGCCAGCTTAGt                              >  2:463819/1‑93 (MQ=255)

                                                           gTTAATTGATCAGGCTGGGCTGGGTCACGATACCCTAACCCAGGCCCGTAACCAGTTGCTTGGTATGGCGGCGCAACATCCTGCCAGCTTAGt                              <  1:976624/93‑1 (MQ=255)

                                                            ttAATTGATCAGGCTGGTCTGGGTCACGATACCCTAACCCAGGCCCGTAACCAGTTGCTTGGTATGGCGGCGCAACATCCTGCCAGCTTAGTc                             <  2:1902310/93‑1 (MQ=255)

                                                            ttAATTGATCAGGCTGGGCTGGGTCACGATACCCTAACCCAGGCCCGTAACCAGTTGCTTGGTATGGCGGCGCAACATCCTGCCAGCTTAGTc                             >  2:7310714/1‑93 (MQ=255)

                                                            ttAATTGATCAGGCTGGGCTGGGTCACGATACCCTAACCCAGGCCCGTAACCAGTTGCTTGGTATGGCGGCGCAACATCCTGCCAGCTTAGTc                             <  1:1441342/93‑1 (MQ=255)

                                                              aaTTGATCAGGCTGGGCTGGGTCACGATACCCTAACCCAGGCCCGTAACCAGTTGCTTGGTATGGCGGCGCAACATCCTGCCAGCTTAGTCAg                           >  2:1120588/1‑93 (MQ=255)

                                                               aTTGATCAGGCTGGGCTGGGTCACGATACCCTAACCCAGGCCCGTAACCAGTTGCTTGGTATGGCGGCGCAACATCCTGCCAGCTTAGTCAGc                          >  2:6477085/1‑93 (MQ=255)

                                                               aTTGATCAGGCTGGGCTGGGTCACGATACCCTAACCCAGGCCCGTAACCAGTTGCTTGGTATGGCGGCGCAACATCCTGCCAGCTTAGTCAGc                          <  1:5489522/93‑1 (MQ=255)

                                                                  gATCAGGCTGGGCTGGGTCACGATACCCTAACCCAGGCCCGTAACCAGTTGCTTGGTATGGCGGCGCAACATCCTTCCAGCTTAGTCAGCGTg                       >  2:5174179/1‑93 (MQ=255)

                                                                  gATCAGGCTGGGCTGGGTCACGATACCCTAACCCAGGCCCGTAACCAGTTGCTTGGTATGGCGGCGCAACATCCTGCCAGCTTAGTCAGCGTg                       <  1:3167953/93‑1 (MQ=255)

                                                                   aTCAGGCTGGGCTGGGTCACGATACCCTAACCCAGGCCCGTAACCAGTTGCTTGGTATGGCGGCGCAACATCCTGCCAGCTTAGTCAGCGTgc                      <  1:566246/93‑1 (MQ=255)

                                                                   aTCAGGCTGGGCTGGGTCACGATACCCTAACCCAGGCCCGTAACCAGTTGCTTGGTATGGCGGCGCAACATCCTGCCAGCTTAGTCAGCGTgc                      <  1:7276983/93‑1 (MQ=255)

                                                                      aGGCTGGGCTGGGTCACGATACCCTAACCCAGGCCCGTAACCAGTTGCTTGGTATGGCGGCGCAACATCCTGCCAGCTTAGTCAGCGTGAGcc                   >  2:3204930/1‑93 (MQ=255)

                                                                       ggctgggctgGGTCACGATACCTTAACCCAGGCCCGTAACCAGTTGCTTGGTATGGCGGCGCAACATCCTGCCAGCTTAGTCAGCGTGCGccg                  <  2:4794856/93‑2 (MQ=255)

                                                                        gctggtctggGTCACGATACCCTAACCCAGGCCCGTAACCAGTTGCTTGGTATGGCGGCGCAACATCCTGCCAGCTTAGTCAGCGTGCGCCCt                 <  2:2925993/93‑1 (MQ=255)

                                                                        gctgggctggGTCCCGCTCCCCTGGCCCGGGCCCGTAACCAGTTGCTTGGTATGGCGGCGCAACATCCTGCCAGCTTAGTCAGCGTGCGCCCt                 <  1:6032949/93‑1 (MQ=255)

                                                                          tgggctgggTCACGATACCCTAACCCAGGCCCGTAACCAGTTGCTTGGTATGGCGGCGCAACATCCTGCCAGCTTAGTCAGCGTGCGCCCTaa               <  1:7200261/93‑1 (MQ=255)

                                                                          tgggctgggTCACGATACCCTAACCCAGGCCCGTAACCAGTTGCTTGGTATGGCGGCGCAACATCCTGCCAGCTTAGTCAGCGTGCGCCCTaa               >  2:7498724/1‑93 (MQ=255)

                                                                          tgggctgggTCACGATACCCTAACCCAGGCCCGTAACCAGTTGCTTGGTATGGCGGCGCAACATCCTGCCAGCTTAGTCAGCGTGCGCCCTaa               <  2:7631924/93‑1 (MQ=255)

                                                                           gggctgggTCACGATACCCTAACCCAGGCCCGTAACCAGTTGCTTGGTATGGCGGCGCAACATCCTGCCAGCTTAGTCAGCGTGCGCCCTAAt              >  2:5886159/1‑93 (MQ=255)

                                                                            ggctgggTCACGATACCCTAACCCAGGCCCGTAACCAGTTGCTTGGTATGGCGGCGCAACATCCTGCCAGCTTAGTCAGCGTGCGCCCTAATg             <  1:6869046/93‑1 (MQ=255)

                                                                            ggctgggTCACGATACCCTAACCCAGGCCCGTAACCAGTTGCTTGGTATGGCGGCGCAACATCCTGCCAGCTTAGTCAGCGTGCGCCCTAATg             <  2:5871379/93‑1 (MQ=255)

                                                                              ctgggTCACGATACCCTAACCCAGGCCCGTAACCAGTTGCTTGGTATGGCGGCGCAACATCCTGCCAGCTTAGTCAGCGTGCGCCCTAATGGc           <  2:7416977/93‑1 (MQ=255)

                                                                                  gTCACGATACCCTAACCCAGGCCCGTAACCAGTTGCTTGGTATGGCGGCGCAACATCCTGCCAGCTTAGTCAGCGTGCGCCCTAATGGCCTgg       >  2:432771/1‑93 (MQ=255)

                                                                                   tCACGATACCCTAACCCAGGCCCGTAACCAGTTGCTTGGTATGGCGGCGCAACATCCTGCCAGCTTAGTCAGCGTGCGCCCTAATGGCCTGGa      <  1:3864961/93‑1 (MQ=255)

                                                                                    cACGATACCCTAACCCAGGCCCGTAACCAGTTGCTTGGTATGGCGGCGCAACATCCTGCCAGCTTAGTCAGCGTGCGCCCTAATGGCCTGGaa     <  1:1752005/93‑1 (MQ=255)

                                                                                    cACGATACCCTAACCCAGGCCCGTAACCAGTTGCTTGGTATGGCGGCGCAACATCCTGCCAGCTTAGTCAGCGTGCGCCCTAATGGCCTGGaa     <  2:1786065/93‑1 (MQ=255)

                                                                                    cACGATACCCTAACCCAGGCCCGTAACCAGTTGCTTGGTATGGCGGCGCAACATCCTGCCAGCTTAGTCAGCGTGCGCCCTAATGGCCTGGaa     <  1:5915558/93‑1 (MQ=255)

                                                                                     aCGATACCCTAACCCAGGCCCGTAACCAGTTGCTTGGTATGGCGGCGCAACATCCTGCCAGCTTAGTCAGCGTGCGCCCTAATGGCCTGGAAg    >  2:5319852/1‑93 (MQ=255)

ATTCCATTCAATATGCCAGCCATTGTTGAACTGGGCACGGCAACGGGTTTCGACTTTGAGTTAATTGATCAGGCTGGGCTGGGTCACGATGCCCTAACCCAGGCCCGTAACCAGTTGCTTGGTATGGCGGCGCAACATCCTGCCAGCTTAGTCAGCGTGCGCCCTAATGGCCTGGAAGAC  >  NC_000913/3414656‑3414835

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 18 ≤` `ATCG/ATCG` `< 28 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`

GATK/CNVnator alignment

BRESEQ :: bam2aln output

TCATTCCATTCAATATGCCAGCCATTGTTGAACTGGGCACGGCAACGGGTTTCGACTTTGAGTTAATTGATCAGGCTGGGCTGGGTCACGATGCCCTAACCCAGGCCCGTAACCAGTTGCTTGGTATGGCGGCGCAACATCCTGCCAGCTTAGTCAGCGTGCGCCCTAATGGCCTGGAAGACACCG  >  NC_000913/3414654‑3414839

TCATTCCATTCAATATGCCAGCCATTGTTGAACTGGGCACGGCAACGGGTTTCGACTTTGAGTTAATTGATCAGGCTGGGCTGGGTCACGATAC                                                                                              <  SRR4302543.5958743/94‑1 (MQ=60)

TCATTCCATTCAATATGCCAGCCATTGTTGAACTGGGCACGGCAACGGGTTTCGACTTTGAGTTAATTGATCAGGCTGGGCTGGGTCACGATAC                                                                                              <  SRR4302543.1241190/94‑1 (MQ=60)

 CATTCCATTCAATATGCCAGCCATTGTTGAACTGGGCACGGCAACGGGTTTCGACTTTGAGTTAATTGATCAGGCTGGGCTGGGTCACGATACC                                                                                             <  SRR4302543.1625925/94‑1 (MQ=60)

  ATTCCATTCAATATGCCAGCCATTGTTGAACTGGGCACGGCAACGGGTTTCGACTTTGAGTTAATTGATCAGGCTGGGCTGGGTCACGATACCC                                                                                            >  SRR4302543.3793816/1‑94 (MQ=60)

   TTCCATTCAATATGCCAGCCATTGTTGAACTGGGCACGGCAACGGGTTTCGACTTTGAGTTAATTGATCAGGCTGGGCTGGGTCACGATACCCT                                                                                           <  SRR4302543.4463771/94‑1 (MQ=60)

   TTCCATTCAATATGCCAGCCATTGTTGAACTGGGCACGGCAACGGGTTTCGACTTTGAGTTAATTGATCAGGCTGGGCTGGGTCACGATACCCT                                                                                           <  SRR4302543.4194733/94‑1 (MQ=60)

   TTCCATTCAATATGCCAGCCATTGTTGAACTGGGCACGGCAACGGGTTTCGACTTTGAGTTAATTGATCAGGCTGGGCTGGGTCACGATACCCT                                                                                           <  SRR4302543.3954668/94‑1 (MQ=60)

    TCCATTCAGTATGCCAGCCATTGTTGAACTGGGCACGGCAACGGGTTTCAACTTTGAGTTAATTGATCAGGCTGGGCTGGGTCACGATACCCTA                                                                                          <  SRR4302543.3294239/94‑1 (MQ=60)

    TCCATTCAATATGCCAGCCATTGTTGAACTGGGCACGGCAACGGGTTTCGACTTTGAGTTAATTGATCAGGCTGGGCTGGGTCACGATACCCTA                                                                                          <  SRR4302543.3294240/94‑1 (MQ=60)

     CCATTCAATATGCCAGCCATTGTTGAACTGGGCACGGCAACGGGTTTCGACTTTGAGTTAATTGATCAGGCTGGGCTGGGTCACGATACCCTAA                                                                                         >  SRR4302543.1039756/1‑94 (MQ=60)

      CATTCAATATGCCAGCCATTGTTGAACTGGGCACGGCAACGGGTTTCGACTTTGAGTTAATTGATCAGGCTGGGCTGGGTCACGATACCCTAAC                                                                                        >  SRR4302543.928884/1‑94 (MQ=60)

      CATTCAATATGCCAGCCATTGTTGAACTGGGCACGGCAACGGGTTTCGACTTTGAGTTAATTGATCAGGCTGGGCTGGGTCACGATACCCTAAC                                                                                        >  SRR4302543.928883/1‑94 (MQ=60)

       ATTCAATATGCCAGCCATTGTTGAACTGGGCACGGCAACGGGTTTCGACTTTGAGTTAATTGATCAGGCTGGGCTGGGTCACGATACCCTAACC                                                                                       <  SRR4302543.753722/94‑1 (MQ=60)

       ATTCAATATGCCAGCCATTGTCGAACTGGGCACGGCAACGGGTTTCGACTTTGAGTTAATTGATCAGGCTGGGCTGGGTCACGATACCCTAACC                                                                                       >  SRR4302543.6945019/1‑94 (MQ=60)

        TTCAATATGCCAGCCATTGTTGAACTGGGCACGGCAACGGGTTTCGACTTTGAGTTAATTGATCAGGCTGGGCTGGGTCACGATACCCTAACCC                                                                                      <  SRR4302543.2508717/94‑1 (MQ=60)

         TCAATATGCCAGCCATTGTTGAACTGGGCACGGCAACGGGTTTCGACTTTGAGTTAATTGATCAGGCTGGGCTGGGTCACGATACCCTAACCCA                                                                                     <  SRR4302543.1584619/94‑1 (MQ=60)

          TAATATGCCAGCCATTGTTGAACTGGGCACGGCAACGGGTTTCGACTTTGAGTTAATTGATCAGGCTGGGCTGGGTCACGATACCCTAACCCAG                                                                                    <  SRR4302543.4506389/94‑1 (MQ=60)

          CAATATGCCAGCCATTGTTGAACTGGGCACGGCAACGGGTTTCGACTTTGAGTTAATTGATCAGGCTGGGCTGGGTCACGATACCCTAACCCAG                                                                                    >  SRR4302543.1434763/1‑94 (MQ=60)

          CAATATGCCAGCCATTGTTGAACTGGGCACGGCAACGGGTTTCGACTTTGAGTTAATTGATCAGGCTGGGCTGGGTCACGATACCCTAACCCAG                                                                                    >  SRR4302543.5621218/1‑94 (MQ=60)

          CAATATGCCAGCCATTGTTGAACTGGGCACGGCAACGGGTTTCGACTTTGAGTTAATTGATCAGGCTGGGCTGGGTCACGATACCCTAACCCAG                                                                                    <  SRR4302543.7617319/94‑1 (MQ=60)

          CAATATGCCAGCCATTGTTGAACTGGGCACGGCAACGGGTTTCGACTTTGAGTTAATTGATCAGGCTGGGCTGGGTCACGATACCCTAACCCAG                                                                                    >  SRR4302543.3272138/1‑94 (MQ=60)

          CAATATGCCAGCCATTGTTGAACTGGGCACGGCAACGGGTTTCGACTTTGAGTTAATTGATCAGGCTGGGCTGGGTCACGATACCCTAACCCAG                                                                                    >  SRR4302543.3272137/1‑94 (MQ=60)

           AATATGCCAGCCATTGTTGAACTGGGCACGGCAACGGGTTTCGACTTTGAGTTAATTGATCAGGCTGGGCTGGGTCACGATACCCTAACCCAGG                                                                                   <  SRR4302543.1092486/94‑1 (MQ=60)

           AATATGCCAGCCATTGTTGAACTGGGCACGGCAACGGGTTTCGACTTTGAGTTAATTGATCAGGCTGGGCTGGGTCACGATACCCTAACCCAGG                                                                                   <  SRR4302543.1092485/94‑1 (MQ=60)

           AATATGCCAGCCATTGTTGAACTGGGCACGGCAACGGGTTTCGACTTTGAGTTAATTGATCAGGCTGGGCTGGGTCACGATACCCTAACCCAGG                                                                                   >  SRR4302543.2028406/1‑94 (MQ=60)

           AATATGCCAGCCATTGTTGAACTGGGCACGGCAACGGGTTTCGACTTTGAGTTAATTGATCAGGCTGGGCTGGGTCACGATACCCTAACCCAGG                                                                                   >  SRR4302543.1721775/1‑94 (MQ=60)

            ATATGCCAGCCATTGTTGAACTGGGCACGGCAACGGGTTTCGACTTTGAGTTAATTGATCAGGCTGGGCTGGGTCACGATACCCTAACCCAGGC                                                                                  <  SRR4302543.6846503/94‑1 (MQ=60)

              ATGCCAGCCATTGTTGAACTGGGCACGGCAACGGGTTTCGACTTTGAGTTAATTGATCAGGCTGGGCTGGGTCACGATACCCTAACCCAGGCCC                                                                                >  SRR4302543.2448648/1‑94 (MQ=60)

              ATGCCAGCCATTGTTGAACTGGGCACGGCAACGGGTTTCGACTTTGAGTTAATTGATCAGGCTGGGCTGGGTCACGATACCCTAACCCAGGCCC                                                                                >  SRR4302543.4085738/1‑94 (MQ=60)

               TGCCAGCCATTGTTGAACTGGGCACGGCAACGGGTTTCGACTTTGAGTTAATTGATCAGGCTGGGCTGGGTCACGATACCCTAACCCAGGCCCG                                                                               <  SRR4302543.3424736/94‑1 (MQ=60)

                GCCAGCCATTGTTGAACTGGGCACGGCAACGGGTTTCGACTTTGAGTTAATTGATCAGGCTGGGCTGGGTCACGATACCCTAACCCAGGCCCGT                                                                              <  SRR4302543.2513637/94‑1 (MQ=60)

                GCCAGCCATTGTTGAACTGGGCACGGCAACGGGTTTCGACTTTGAGTTAATTGATCAGGCTGGGCTGGGTCACGATACCCTAACCCAGGCCCGT                                                                              >  SRR4302543.7668119/1‑94 (MQ=60)

                 CCAGCCATTGTTGAACTGGGCACGGCAACGGGTTTCGACTTTGAGTTAATTGATCAGGCTGGGCTGGGTCACGATACCCTAACCCAGGCCCGTA                                                                             >  SRR4302543.7469914/1‑94 (MQ=60)

                   AGCCATTGTTGAACTGGGCACGGCAACGGGTTTCGACTTTGAGTTAATTGATCAGGCTGGGCTGGGTCACGATACCCTAACCCAGGCCCGTAAC                                                                           >  SRR4302543.1132691/1‑94 (MQ=60)

                   AGCCATTGTTGAACTGGGCACGGCAACGGGTTTCGACTTTGAGTTAATTGATCAGGCTGGGCTGGGTCACGATACCCTAACCCAGGCCCGTAAC                                                                           <  SRR4302543.7705387/94‑1 (MQ=60)

                    GCCATTGTTGAACTGGGCACGGCAACGGGTTTCGACTTTGAGTTAATTGATCAGGCTGGGCTGGGTCACGATACCCTAACCCAGGCCCGTAACC                                                                          >  SRR4302543.1161887/1‑94 (MQ=60)

                    GCCATTGTTGAACTGGGCACGGCAACGGGTTTCGACTTTGAGTTAATTGATCAGGCTGGGCTGGGTCACGATACCCTAACCCAGGCCCGTAACC                                                                          <  SRR4302543.2880461/94‑1 (MQ=60)

                      CATTGTTGAACTGGGCACGGCAACGGGTTTCGACTTTGAGTTAATTGATCAGGCTGGGCTGGGTCACGATACCCTAACCCAGGCCCGTAACCAG                                                                        <  SRR4302543.4718641/94‑1 (MQ=60)

                      CATTGTTGAACTGGGCACGGCAACGGGTTTCGACTTTGAGTTAATTGATCAGGCTGGGCTGGGTCACGATACCCTAACCCAGGCCCGTAACCAG                                                                        >  SRR4302543.5478523/1‑94 (MQ=60)

                      CATTGTTGAACTGGGCACGGCAACGGGTTTCGACTTTGAGTTAATTGATCAGGCTGGGCTGGGTCACGATACCCTAACCCAGGCCCGTAACCAG                                                                        <  SRR4302543.2325387/94‑1 (MQ=60)

                      CATTGTTGAACTGGGCACGGCAACGGGTTTCGACTTTGAGTTAATTGATCAGGCTGGGCTGGGTCACGATACCCTAACCCAGGCCCGTAACCAG                                                                        >  SRR4302543.14509/1‑94 (MQ=60)

                      CATTGTTGAACTGGGCACGGCAACGGGTTTCGACTTTGAGTTAATTGATCAGGCTGGGCTGGGTCACGATACCCTAACCCAGGCCCGTAACCAG                                                                        >  SRR4302543.6374443/1‑94 (MQ=60)

                      CATTGTTGAACTGGGCACGGCAACGGGTTTCGACTTTGAGTTAATTGATCAGGCTGGGCTGGGGCACGATACCCTAACCCAGGCCCGTAACCAG                                                                        >  SRR4302543.3775204/1‑94 (MQ=60)

                       ATTGTTGAACTGGGCACGGCAACGGGTTTCGACTTTGAGTTAATTGATCAGGCTGGGCTGGGTCACGATACCCTAACCCAGGCCCGTAACCAGT                                                                       >  SRR4302543.4453230/1‑94 (MQ=60)

                       ATTGTTGAACTGGGCACGGCAACGGGTTTCGACTTTGAGTTAATTGATCAGGCTGGGCTGGGTCACGATACCCTAACCCAGGCCCGTAACCAGT                                                                       >  SRR4302543.7598060/1‑94 (MQ=60)

                       ATTGTTGAACTGGGCACGGCAACGGGTTTCGACTTTGAGTTAATTGATCAGGCTGGGCTGGGTCACGATACCCTAACCCAGGCCCGTAACCAGT                                                                       >  SRR4302543.3184851/1‑94 (MQ=60)

                       ATTGTTGAACTGGGCACGGCAACGGGTTTCGACTTTGAGTTAATTGATCAGGCTGGGCTGGGTCACGATACCCTAACCCAGGCCCGTAACCAGT                                                                       >  SRR4302543.7733626/1‑94 (MQ=60)

                       ATTGTTGAACTGGGCACGGCAACGGGTTTCGACTTTGAGTTAATTGATCAGGCTGGGCTGGGTCACGATACCCTAACCCAGGCCCGTAACCAGT                                                                       >  SRR4302543.4694942/1‑94 (MQ=60)

                       ATTGTTGAACTGGGCACGGCAACGGGTTTCGACTTTGAGTTAATTGATCAGGCTGGGCTGGGTCACGATACCCTAACCCAGGCCCGTAACCAGT                                                                       >  SRR4302543.1163246/1‑94 (MQ=60)

                       ATTGTTGAACTGGGCACGGCAACGGGTGTCGACTTTGAGTTAATTGATCAGGCTGGGCTGGGTCACGATACCCTAACCCAGGCCCGTAACCAGT                                                                       <  SRR4302543.7216447/94‑1 (MQ=60)

                         TGTTGAACTGGGCACGGCAACGGGTTTCGACTTTGAGTTAATTGATCAGGCTGGGCTGGGTCACGATACCCTAACCCAGGCCCGTAACCAGTTG                                                                     >  SRR4302543.5672864/1‑94 (MQ=60)

                         TGTTGAACTGGGCACGGCAACGGGTTTCGACTTTGAGTTAATTGATCAGGCTGGGCTGGGTCACGATACCCTAACCCAGGCCCGTAACCAGTTG                                                                     >  SRR4302543.1935799/1‑94 (MQ=60)

                          GTTGAACTGGGCACGGCAACGGGTTTCGACTTTGAGTTAATTGATCAGGCTGGGCTGGGTCACGATAACCTAACCCAGGCCCGTAACCAGTTGC                                                                    >  SRR4302543.1520462/1‑94 (MQ=60)

                           TTGAACTGGGCACGGCAACGGGTTTCGACTTTGAGTTAATTGATCAGGCTGGGCTGGGTCACGATACCCTAACCCAGGCCCGTAACCAGTTGCT                                                                   <  SRR4302543.1929580/94‑1 (MQ=60)

                           TTGAACTGGGCACGGCAACGGGTTTCGACTTTGAGTTAATTGATCAGGCTGGGCTGGGTCACGATACCCTAACCCAGGCCCGTAACCAGTTGCT                                                                   >  SRR4302543.3393921/1‑94 (MQ=60)

                            TGAACTGGGCACGGCAACGGGTTTCGACTTTGAGTTAATTGATCAGGCTGGGCTGGGTCACGATACCCTAACCCAGGCCCGTAACCAGTTGCTT                                                                  <  SRR4302543.682802/94‑1 (MQ=60)

                            TGAACTGGGCACGGCAACGGGTTTCGACTTTGAGTTAATTGATCAGGCTGGGCTGGGTCACGATACCCTAACCCAGGCCCGTAACCAGTTGCTT                                                                  >  SRR4302543.4711985/1‑94 (MQ=60)

                            CGAACTGGGCACGGCAACGGGTTTCGACTTTGAGTTAATTGATCAGGCTGGGCTGGGTCACGATACCCTAACCCAGGCCCGTAACCAGTTGCTT                                                                  >  SRR4302543.407458/1‑94 (MQ=60)

                             GAACTGGGCACGGCAACGGGTTTCGACTTTGAGTTAATTGATCAGGCTGGGCTGGGTCACGATACCCTAACCCAGGCCCGTAACCAGTTGCTTG                                                                 <  SRR4302543.4485812/94‑1 (MQ=60)

                             GAACTGGGCACGGCAACGGGTTTCGACTTTGAGTTAATTGATCAGGCTGGGCTGGGTCACGATACCCTAACCCAGGCCCGTAACCAGTTGCTTG                                                                 <  SRR4302543.4485814/94‑1 (MQ=60)

                             GAACTGGGCACGGCAACGGGTGTCGACTTTGAGGTAATTGATCAGGCTGGGCTGGGTCACGATACCCTAACCCAGGCCCGTAACCAGTTGCTTG                                                                 <  SRR4302543.4095404/94‑1 (MQ=60)

                              AACTGGGCACGGCAACGGGTTTCGACTTTGAGTTAATTGATCAGGCTGGGCTGGGTCACGATACCCTAACCCAGGCCCGTAACCAGTTGCTTGG                                                                >  SRR4302543.6130277/1‑94 (MQ=60)

                              AACTGGGCACGGCAACGGGTTTCGACTTTGAGTTAATTGATCAGGCTGGGCTGGGTCACGATACCCTAACCCAGGCCCGTAACCAGTTGCTTGG                                                                <  SRR4302543.730200/94‑1 (MQ=60)

                               ACTGGGCACGGCAACGGGTTTCGACTTTGAGTTAATTGATCAGGCTGGGCTGGGTCACGATACCCTAACCCAGGCCCGTAACCAGTTGCTTGGT                                                               <  SRR4302543.3581312/94‑1 (MQ=60)

                               ACTGGGCACGGCAACGGGTTTCGACTTTGAGTTAATTGATCAGGCTGGGCTGGGTCACGATACCCTAACCCAGGCCCGTAACCAGTTGCTTGGT                                                               <  SRR4302543.4164246/94‑1 (MQ=60)

                                 TGGGCACGGCAACGGGTTTCGACTTTGAGTTAATTGATCAGGCTGGGCTGGGTCACGATACCCTAACCCAGGCCCGTAACCAGTTGCTTGGTAT                                                             <  SRR4302543.6256328/94‑1 (MQ=60)

                                 TGGGCACGGCAACGGGTTTCGACTTTGAGTTAATTGATCAGGCTGGGCTGGGTCACGATACCCTAACCCAGGCCCGTAACCAGTTGCTTGGTAT                                                             <  SRR4302543.4796816/94‑1 (MQ=60)

                                 TGGGCACGGCAACGGGTTTCGACTTTGAGTTAATTGATCAGGCTGGGCTGGGTCACGATACCCTAACCCAGGCCCGTAACCAGTTGCTTGGTAT                                                             <  SRR4302543.3500535/94‑1 (MQ=60)

                                 TGGGCACGGCAACGGGTTTCGACTTTGAGTTAATTGATCAGGCTGGGCTGGGTCACGATACCCTAACCCAGGCCCGTAACCAGTTGCTTGGTAT                                                             <  SRR4302543.421375/94‑1 (MQ=60)

                                 TGGGCACGGCAACGGGTTTCGACTTTGAGTTAATTGATCAGGCTGGGCTGGGTCACGATACCCTAACCCAGGCCCGTAACCAGTTGCTTGGTAT                                                             <  SRR4302543.1474614/94‑1 (MQ=60)

                                 TGGGCACGGCAACGGGTTTCGACTTTGAGTTAATTGATCAGGCTGGGCTGGGTCACGATACCCTAACCCAGGCCCGTAACCAGTTGCTTGGTAT                                                             >  SRR4302543.3452337/1‑94 (MQ=60)

                                 TGGGCACGGCAACGGGTTTCGACTTTGAGTTAATTGATCAGGCTGGGCTGGGTCACGATACCCTAACCCAGGCCCGTAACCAGTTGCTTGGTAT                                                             <  SRR4302543.2200983/94‑1 (MQ=60)

                                  GGGCACGGCAACGGGTTTCGACTTTGAGTTAATTGATCAGGCTGGGCTGGGTCACGATACCCTAACCCAGGCCCGTAACCAGTTGCTTGGTATG                                                            <  SRR4302543.969610/94‑1 (MQ=60)

                                  GGGCACGGCAACGGGTTTCGACTTTGAGTTAATTGATCAGGCTGGGCTGGGTCACGATACCCTAACCCAGGCCCGTAACCAGTTGCTTGGTATG                                                            <  SRR4302543.3704155/94‑1 (MQ=60)

                                  GGGCACGGCAACGGGTTTCGACTTTGAGTTAATTGATCAGGCTGGGCTGGGTCACGATACCCTAACCCAGGCCCGTAACCAGTTGCTTGGTATG                                                            <  SRR4302543.4613548/94‑1 (MQ=60)

                                    GCACGGCAACGGGTTTCGACTTTGAGTTAATTGATCAGGCTGGGCTGGGTCACGATACCCTAACCCAGGCCCGTAACCAGTTGCTTGGTATGGC                                                          <  SRR4302543.2400268/94‑1 (MQ=60)

                                     CACGGCAACGGGTTTCGACTTTGAGTTAATTGATCAGGCTGGGCTGGGTCACGATACCCTAACCCAGGCCCGTAACCAGTTGCTTGGTATGGCG                                                         >  SRR4302543.1271701/1‑94 (MQ=60)

                                     CACGGCAACGGGTTTCGACTTTGAGTTAATTGATCAGGCTGGGCTGGGTCACGATACCCTAACCCAGGCCCGTAACCAGTTGCTTGGTATGGCG                                                         <  SRR4302543.7681136/94‑1 (MQ=60)

                                     CACGGCAACGGGTTTCGACTTTGAGTTAATTGATCAGGCTGGGCTGGGTCACGATACCCTAACCCAGGCCCGTAACCAGTTGCTTGGTATGGCG                                                         >  SRR4302543.2448558/1‑94 (MQ=60)

                                     CACGGCAACGGGTTTCGACTTTGAGTTAATTGATCAGGCTGGGCTGGGTCACGATACCCTAACCCAGGCCCGTAACCAGTTGCTTGGTATGGCG                                                         <  SRR4302543.2817666/94‑1 (MQ=60)

                                     CACGGCAACGGGTTTCGACTTTGAGTTAATTGATCAGGCTGGGCTGGGTCACGATACCCTAACCCAGGCCCGTAACCAGTTGCTTGGTATGGCG                                                         <  SRR4302543.3131684/94‑1 (MQ=60)

                                        GGCAACGGGTTTCGACTTTGAGTTAATTGATCAGGCTGGGCTGGGTCACGATACCCTAACCCAGGCCCGTAACCAGTTGCTTGGTATGGCGGCG                                                      >  SRR4302543.726948/1‑94 (MQ=60)

                                          CAACGGGTTTCGACTTTGAGTTAATTGATCAGGCTGGGCTGGGTCACGATACCCTAACCCAGGCCCGTAACCAGTTGCTTGGTATGGCGGCGCA                                                    <  SRR4302543.3677376/94‑1 (MQ=60)

                                          CAACGGGTTTCGACTTTGAGTTAATTGATCAGGCTGGGCTGGGTCACGATACCCTAACCCAGGCCCGTAACCAGTTGCTTGGTATGGCGGCGCA                                                    >  SRR4302543.7846084/1‑94 (MQ=60)

                                          CAACGGGTTTCGACTTTGAGTTAATTGATCAGGCTGGGCTGGGTCACGATACCCTAACCCAGGCCCGTAACCAGTTGCTTGGTATGGCGGCGCA                                                    >  SRR4302543.2918616/1‑94 (MQ=60)

                                            ACGGGTTTCGACTTTGAGTTAATTGATCAGGCTGGGCTGGGTCACGATACCCTAACCCAGGCCCGTAACCAGTTGCTTGGTATGGCGGCGCAAC                                                  <  SRR4302543.3000269/94‑1 (MQ=60)

                                            ACGGGTTTCGACTTTGAGTTAATTGATCAGGCTGGGCTGGGTCACGATACCCTAACCCAGGCCCGTAACCAGTTGCTTGGTATGGCGGCGCAAC                                                  <  SRR4302543.6585885/94‑1 (MQ=60)

                                             CGGGTTTCGACTTTGAGTTAATTGATCAGGCTGGGCTGGGTCACGATACCCTAACCCAGGCCCGTAACCAGTTGCTTGGTATGGCGGCGCAACA                                                 <  SRR4302543.1954079/94‑1 (MQ=60)

                                             CGGGTTTCGACTTTGAGTTAATTGATCAGGCTGGGCTGGGTCACGATACCATAACCCAGGCCCGTAACCAGTTGCTTGGTATGGCGGCGCAACA                                                 <  SRR4302543.7485541/94‑1 (MQ=60)

                                              GGGTTTCGACTTTGAGTTAATTGATCAGGCTGGGCTGGGTCACGATACCCTAACCCAGGCCCGTAACCAGTTGCTTGGTATGGCGGCGCAACAT                                                >  SRR4302543.5201400/1‑94 (MQ=60)

                                               GGTTTCGACTTTGAGTTAATTGATCAGGCTGGGCTGGGTCACGATACCCTAACCCAGGCCCGTAACCAGTTGCTTGGTATGGCGGGGCAACATC                                               >  SRR4302543.6589790/1‑94 (MQ=60)

                                               GGTTTCGACTTTGAGTTAATTGATCAGGCTGGGCTGGGTCACGATACCCTAACCCAGGCCCGTAACCAGTTGCTTGGTATGGCGGCGCAACATC                                               <  SRR4302543.4222867/94‑1 (MQ=60)

                                               GGTTTCGACTTTGAGTTAATTGATCAGGCTGGGCTGGGTCACGATACCCTAACCCAGGCCCGTAACCAGTTGCTTGGTATGGCGGCGCAACATC                                               <  SRR4302543.6855158/94‑1 (MQ=60)

                                                GTTTCGACTTTGAGTTAATTGATCAGGCTGGGCTGGGTCACGATACCCTAACCCAGGCCCGTAACCAGTTGCTTGGTATGGCGGCGCCACATCC                                              >  SRR4302543.7393342/1‑94 (MQ=60)

                                                GTTTCGACTTTGAGTTAATTGATCAGGCTGGGCTGGGTCACGATACCCTAACCCAGGCCCGTAACCAGTTGCTTGGTATGGCGGCGCAACATCC                                              >  SRR4302543.6952100/1‑94 (MQ=60)

                                                 TTTCGACTTTGAGTTAATTGATCAGGCTGGGCTGGGTCACGATACCCTAACCCAGGCCCGTAACCAGTTGCTTGGTATGGCGGCGCAACATCCT                                             <  SRR4302543.6026563/94‑1 (MQ=60)

                                                 TTTCGACTTTGAGTTAATTGATCAGGCTGGGCTGGGTCACGATACCCTAACCCAGGCCCGTAACCAGTTGCTTGGTATGGCGGCGCAACATCCT                                             <  SRR4302543.5423567/94‑1 (MQ=60)

                                                 TTTCGACTTTGAGTTAATTGATCAGGCTGGGCTGGGTCACGATACCCTAACCCAGGCCCGTAACCAGTTGCTTGGTATGGCGGCGCAACATCCT                                             <  SRR4302543.3597427/94‑1 (MQ=60)

                                                 TTTCGACTTTGAGTTAATTGATCAGGCTGGGCTGGGTCACGATACCCTAACCCAGGCCCGTAACCAGTTGCTTGGTATGGCGGCGCAACATCCT                                             <  SRR4302543.3135501/94‑1 (MQ=60)

                                                 TTTCGACTTTGAGTTAATTGATCAGGCTGGGCTGGGTCACGATACCCTAACCCAGGCCCGTAACCAGTTGCTTGGTATGGCGGCGCAACATCCT                                             <  SRR4302543.7034140/94‑1 (MQ=60)

                                                 TGTCGACTTTGAGTTCATTGAGCACGCGGGGCTTGGTCACGTGCCCCTAACCCAGGCCCGTAACCAGGTTCTTGGTATGGCGGCGCAACAGCCT                                             <  SRR4302543.6026562/94‑1 (MQ=30)

                                                  TTCGACTTTGAGTTAATTGATCAGGCTGGGCTGGGTCACGATACCCTAACCCAGGCCCGTAACCAGTTGCTTGGTATGGCGGCGCAACATCCTG                                            <  SRR4302543.1858154/94‑1 (MQ=60)

                                                  TTCGACTTTGAGTTAATTGATCAGGCTGGGCTGGGTCACGATACCCTAACCCAGGCCCGTAACCAGTTGCTTGGTATGGCGGCGCAACATCCTG                                            >  SRR4302543.4681859/1‑94 (MQ=60)

                                                   TCGACTTTGAGTTAATTGATCAGGCTGGGCTGGGTCACGATACCCTAACCCAGGCCCGTAACCAGTTGCTTGGTATGGCGGCGCAACATCCTGC                                           <  SRR4302543.7925687/94‑1 (MQ=60)

                                                    CGACTTTGAGTTAATTGATCAGGCTGGGCTGGGTCACGATACCCTAACCCAGGCCCGTAACCAGTTGCTTGGTATGGCGGCGCAACATCCTGCC                                          <  SRR4302543.6108876/94‑1 (MQ=60)

                                                    CGACTTTGAGTTAATTGATCAGGCTGGGCTGGGTCACGATACCCTAACCCAGGCCCGTAACCAGTTGCTTGGTATGGCGGCGCAACATCCTGCC                                          >  SRR4302543.295870/1‑94 (MQ=60)

                                                    CGACTTTGAGTTAATTGATCAGGCTGGGCTGGGTCACGATACCCTAACCCAGGCCCGTAACCAGTTGCTTGGTATGGCGGCGCAACATCCTGCC                                          >  SRR4302543.1941443/1‑94 (MQ=60)

                                                    CGACTTTGAGTTAATTGATCAGGCTGGGCTGGGTCACGATACCCTAACCCAGGCCCGTAACCAGTTGCTTGGTATGGCGGCGCAACATCCTGCC                                          >  SRR4302543.7519398/1‑94 (MQ=60)

                                                     GACTTTGAGTTAATTGATCAGGCTGGGCTGGGTCACGATACCCTAACCCAGGCCCGTAACCAGTTGCTTGGTATGGCGGCGCAACATCCTGCCA                                         <  SRR4302543.4567914/94‑1 (MQ=60)

                                                     GACTTTGAGTTAATTGATCAGGCTGGGCTGGGTCACGATACCCTAACCCAGGCCCGTAACCAGTTGCTTGGTATGGCGGCGCAACATCCTGCCA                                         >  SRR4302543.483154/1‑94 (MQ=60)

                                                      ACTTTGAGTTAATTGATCAGGCTGGGCTGGGTCACGATACCCTAACCCAGGCCCGTAACCAGTTGCTTGGTATGGCGGCGCAACATCCTGCCAG                                        >  SRR4302543.1868507/1‑94 (MQ=60)

                                                      ACTTTGAGTTAATTGATCAGGCTGGGCTGGGTCACGATACCCTAACCCAGGCCCGTAACCAGTTGCTTGGTATGGCGGCGCAACATCCTGCCAG                                        >  SRR4302543.7488130/1‑94 (MQ=60)

                                                      ACTTTGAGTTAATTGATCAGGCTGGGCTGGGTCACGATACCCTAACCCAGGCCCGTAACCAGTTGCTTGGTATGGCGGCGCAACATCCTGCCAG                                        <  SRR4302543.6269798/94‑1 (MQ=60)

                                                      ACTTTGAGTTAATTGATCAGGCTGGGCTGGGTCACGATACCCTAACCCAGGCCCGTAACCAGTTGCTTGGTATGGCGGCGCAACATCCTGCCAG                                        <  SRR4302543.1224322/94‑1 (MQ=60)

                                                      ACTTTGAGTTAATTGATCAGGCTGGGCTGGGTCACGATACCCTAACCCAGGCCCGTAACCAGTTGCTTGGTATGGCGGCGCAACATCCTGCCAG                                        <  SRR4302543.1613608/94‑1 (MQ=60)

                                                       CTTTGAGTTAATTGATCAGGCTGGGCTGGGTCACGATACCCTAACCCAGGCCCTAAACCAGTTGCTTGTTATGGCGGCGCAACATCCTGCCCGC                                       >  SRR4302543.1271051/1‑94 (MQ=60)

                                                       CTTTGAGTTAATTGATCAGGCTGGGCTGGGTCACGATACCCTAACCCAGGCCCGTAACCAGTTGCTTGGTATGGCGGCGCAACATCCTGCCAGC                                       >  SRR4302543.1193813/1‑94 (MQ=60)

                                                       CTTTGAGTTAATTGATCAGGCTGGGCTGGGTCACGATACCCTAACCCAGGCCCGTAACCAGTTGCTTGGTATGGCGGCGCAACATCCTGCCAGC                                       >  SRR4302543.4231564/1‑94 (MQ=60)

                                                       CTTTGAGTTAATTGATCAGGCTGGGCTGGGTCACGATACACTAACCCAGGCCCGTAACCAGTTGCTTGGTATGGCGGCGCAACATCCTGCCAGC                                       >  SRR4302543.4746157/1‑94 (MQ=60)

                                                           GAGTTAATTGATCAGGCTGGGCTGGGTCACGATAGCCTAACACACGCCCGTAACCAGgtcctttgactggctgcggcagaacctcccaccttcg                                   >  SRR4302543.4164273/1‑57 (MQ=45)

                                                           GAGTTAATTGATCAGGCTGGGCTGGGTCACGATACCCTAACCCAGGCCCGTAACCAGTTGCTTGGTATGGCGGCGCAACATCCTGCCAGCTTAG                                   >  SRR4302543.4164274/1‑94 (MQ=60)

                                                           GAGTTAATTGATCAGGCTGGGCTGGGTCACGATACCCTAACCCAGGCCCGTAACCAGTTGCTTGGTATGGCGGCGCAACATCCTGCCAGCTTAG                                   <  SRR4302543.241614/94‑1 (MQ=60)

                                                           GAGTTAATTGATCAGGCTGGGCTGGGTCACGATACCCTAACCCAGGCCCGTAACCAGTTGCTTGGTATGGCGGCGCAACATCCTGCCAGCTTAG                                   <  SRR4302543.3940267/94‑1 (MQ=60)

                                                            AGTTAATTGATCAGGCTGGGCTGGGTCACGATACCCTAACCCAGGCCCGTAACCAGTTGCTTGGTATGGCGGCGCAACATCCTGCCAGCTTAGT                                  <  SRR4302543.303355/94‑1 (MQ=60)

                                                             GTTAATTGATCAGGCTGGGCTGGGTCACGATACCCTAACCCAGGCCCGTAACCAGTTGCTTGGTATGGCGGCGCAACATCCTGCCAGCTTAGTC                                 <  SRR4302543.985237/94‑1 (MQ=60)

                                                             GTTAATTGATCAGGCTGGGCTGGGTCACGATACCCTAACCCAGGCCCGTAACCAGTTGCTTGGTATGGCGGCGCAACATCCTGCCAGCTTAGTC                                 <  SRR4302543.4253403/94‑1 (MQ=60)

                                                              TTAATTGATCAGGCTGGGCTGGGTCACGATACCCTAACCCAGGCCCGTAACCAGTTGCTTGGTATGGCGGCGCAACATCCTGCCAGCTTAGTCA                                <  SRR4302543.1454361/94‑1 (MQ=60)

                                                                AATTGATCAGGCTGGGCTGGGTCACGATACCCTAACCCAGGCCCGTAACCAGTTGCTTGGTATGGCGGCGCAACATCCTGCCAGCTTAGTCAGC                              <  SRR4302543.6643026/94‑1 (MQ=60)

                                                                 ATTGATCAGGCTGGGCTGGGTCACGATACCCTAACCCAGGCCCGTAACCAGTTGCTTGGTATGGCGGCGCAACATCCTGCCAGCTTAGTCAGCG                             >  SRR4302543.4188830/1‑94 (MQ=60)

                                                                 ATTGATCAGGCTGGGCTGGGTCACGATACCCTAACCCAGGCCCGTAACCAGTTGCTTGGTATGGCGGCGCAACATCCTGCCAGCTTAGTCAGCG                             <  SRR4302543.5539304/94‑1 (MQ=60)

                                                                 ATTGATCAGGCTGGGCTGGGTCACGATACCCTAACCCAGGCCCGTAACCAGTTGCTTGGTATGGCGGCGCAACATCCTGCCAGCTTAGTCAGCG                             <  SRR4302543.618931/94‑1 (MQ=60)

                                                                   TGATCAGGCTGGGCTGGGTCACGATACCCTAACCCAGGCCCGTAACCAGTTGCTTGGTATGGCGGCGCAACATCCTGCCAGCTTAGTCAGCGTG                           <  SRR4302543.2325550/94‑1 (MQ=60)

                                                                   TGATCAGGCTGGGCTGGGTCACGATACCCTAACCCAGGCCCGTAACCAGTTGCTTGGTATGGCGGCGCAACATCCTGCCAGCTTAGTCAGCGTG                           >  SRR4302543.2004751/1‑94 (MQ=60)

                                                                   TGATCAGGCTGGGCTGGGTCACGATACCCTAACCCAGGCCCGTAACCAGTTGCTTGGTATGGCGGCGCAACATCCTGCCAGCTTAGTCAGCGTG                           >  SRR4302543.2168946/1‑94 (MQ=60)

                                                                    GATCAGGCTGGGCTGGGTCACGATACCCTAACCCAGGCCCGTAACCAGTTGCTTGGTATGGCGGCGCAACATCCTGCCAGCTTAGTCAGCGTGC                          <  SRR4302543.3196477/94‑1 (MQ=60)

                                                                     ATCAGGCTGGGCTGGGTCACGATACCCTAACCCAGGCCCGTAACCAGTTGCTTGGTATGGCGGCGCAACATCCTGCCAGCTTCGTCAGCGTGCG                         >  SRR4302543.1769185/1‑94 (MQ=60)

                                                                     ATCAGGCTGGGCTGGGTCACGATACCCTAACCCAGGCCCGTAACCAGTTGCTTGGTATGGCGGCGCAACATCCTGCCAGCTTAGTCAGCGTGCG                         <  SRR4302543.7347272/94‑1 (MQ=60)

                                                                     ATCAGGCTGGGCTGGGTCACGATACCCTAACCCAGGCCCGTAACCAGTTGCTTGGTATGGCGGCGCAACATCCTGCCAGCTTAGTCAGCGTGCG                         <  SRR4302543.1995730/94‑1 (MQ=60)

                                                                     ATCAGGCTGGGCTGGGTCACGATACCCTAACCCAGGCCCGTAACCAGTTGCTTGGTATGGCGGCGCAACATCCTGCCAGCTTAGTCAGCGTGCG                         >  SRR4302543.747930/1‑94 (MQ=60)

                                                                     ATCAGGCTGGGCTGGGTCACGATACCCTAACCCAGGCCCGTAACCAGTTGCTTGGTATGGCGGCGCAACATCCTGCCAGCTTAGTCAGCGTGCG                         <  SRR4302543.3008042/94‑1 (MQ=60)

                                                                     ATCAGGCTGGGCTGGGTCACGATACCCTAACCCAGGCCCGTAACCAGTTGCTTGGTATGGCGGCGCAACATCCTGCCAGCTTAGTCAGCGTGCG                         <  SRR4302543.571432/94‑1 (MQ=60)

                                                                      TCAGGCTGGGCTGGGTCACGATACCCTAACCCAGGCCCGTAACCAGTTGCTTGGTATGGCGGCGCAACATCCTGCCAGCTTAGTCAGCGTGCGC                        <  SRR4302543.194364/94‑1 (MQ=60)

                                                                        AGGCTGGGCTGGGTCACGATACCCTAACCCAGGCCCGTAACCAGTTGCTTGGTATGGCGGCGCAACATCCTGCCAGCTTAGTCAGCGTGCGCCC                      >  SRR4302543.4665650/1‑94 (MQ=60)

                                                                        AGGCTGGGCTGGGTCACGATACCCTAACCCAGGCCCGTAACCAGTTGCTTGGTATGGCGGCGCAACATCCTGCCAGCTTAGTCAGCGTGCGCCC                      >  SRR4302543.7617712/1‑94 (MQ=60)

                                                                         GGCTGGGCTGGGTCACGATACCCTAACCCAGGCCCGTAACCAGTTGCTTGGTATGGCGGCGCAACATCCTGCCAGCTTAGTCAGCGTGCGCCCT                     >  SRR4302543.7137976/1‑94 (MQ=60)

                                                                          GCTGGGCTGGGTCCCGCTCCCCTGGCCCGGGCCCGTAACCAGTTGCTTGGTATGGCGGCGCAACATCCTGCCAGCTTAGTCAGCGTGCGCCCTA                    <  SRR4302543.6089549/94‑1 (MQ=60)

                                                                            TGGGCTGGGTCACGATACCCTAACCCAGGCCCGTAACCAGTTGCTTGGTATGGCGGCGCAACATCCTGCCAGCTTAGTCAGCGTGCGCCCTAAT                  <  SRR4302543.326442/94‑1 (MQ=60)

                                                                            TGGGCTGGGTCACGATACCCTAACCCAGGCCCGTAACCAGTTGCTTGGTATGGCGGCGCAACATCCTGCCAGCTTAGTCAGCGTGCGCCCTAAT                  <  SRR4302543.7270073/94‑1 (MQ=60)

                                                                             GGGCTGGGTCACGATACCCTAACCCAGGCCCGTAACCAGTTGCTTGGTATGGCGGCGCAACATCCTGCCAGCTTAGTCAGCGTGCGCCCTAATG                 <  SRR4302543.4892418/94‑1 (MQ=60)

                                                                              GGCTGGGTCACGATACCCTAACCCAGGCCCGTAACCAGTTGCTTGGTATGGCGGCGCAACATCCTGCCAGCTTAGTCAGCGTGCGCCCTAATGG                <  SRR4302543.289024/94‑1 (MQ=60)

                                                                              GGCTGGGTCACGATACCCTAACCCAGGCCCGTAACCAGTTGCTTGGTATGGCGGCGCAACATCCTGCCAGCTTAGTCAGCGTGCGCCCTAATGG                <  SRR4302543.4282692/94‑1 (MQ=60)

                                                                              GGCTGGGTCACGATACCCTAACCCAGGCCCGTAACCAGTTGCTTGGTATGGCGGCGCAACATCCTGCCAGCTTAGTCAGCGTGCGCCCTAATGG                <  SRR4302543.6933739/94‑1 (MQ=60)

                                                                              GGCTGGGTCACGATACCCTAACCCAGGCCCGTAACCAGTTGCTTGGTATGGCGGCGCAACATCCTGCCAGCTTAGTCAGCGTGCGCCCTAATGG                <  SRR4302543.4762357/94‑1 (MQ=60)

                                                                                CTGGGTCACGATACCCTAACCCAGGCCCGTAACCAGTTGCTTGGTATGGCGGCGCAACATCCTGCCAGCTTAGTCAGCGTGCGCCCTAATGGCC              >  SRR4302543.4158126/1‑94 (MQ=60)

                                                                                CTGGGTCACGATACCCTAACCCAGGCCCGTAACCAGTTGCTTGGTATGGCGGCGCAACATCCTGCCAGCTTAGTCAGCGTGCGCCCTAATGGCC              >  SRR4302543.5930161/1‑94 (MQ=60)

                                                                                 TGGGTCACGATACCCTAACCCAGGCCCGTAACCAGTTGCTTGGTATGGCGGCGCAACATCCTGCCAGCTTAGTCAGCGTGCGCCCTAATGGCCT             <  SRR4302543.4438126/94‑1 (MQ=60)

                                                                                 TGGGTCACGATACCCTAACCCAGGCCCGTAACCAGTTGCTTGGTATGGCGGCGCAACATCCTGCCAGCTTAGTCAGCGTGCGCCCTAATGGCCT             >  SRR4302543.188784/1‑94 (MQ=60)

                                                                                 TGGGTCACGATACCCTAACCCAGGCCCGTAACCAGTTGCTTGGTATGGCGGCGCAACATCCTGCCAGCTTAGTCAGCGTGCGCCCTAATGGCCT             <  SRR4302543.1829821/94‑1 (MQ=60)

                                                                                 TGGGTCACGATACCCTAACCCAGGCCCGTAACCAGTTGCTTGGTATGGCGGCGCAACATCCTGCCAGCTTAGTCAGCGTGCGCCCTAATGGCCT             <  SRR4302543.5221459/94‑1 (MQ=60)

                                                                                  GGGTCACGATACCCTAACCCAGGCCCGTAACCAGTTGCTTGGTATGGCGGCGCAACATCCTGCCAGCTTAGTCAGCGTGCGCCCTAATGGCCTG            <  SRR4302543.7509249/94‑1 (MQ=60)

                                                                                   GGTCACGATACCCTAACCCAGGCCCGTAACCAGTTGCTTGGTATGGCGGCGCAACATCCTGCCAGCTTAGTCAGCGTGCGCCCTAATGGCCTGG           <  SRR4302543.507758/94‑1 (MQ=60)

                                                                                     TCACGATACCCTAACCCAGGCCCGTAACCAGTTGCTTGGTATGGCGGCGCAACATCCTGCCAGCTTAGTCAGCGTGCGCCCTAATGGCCTGGAA         <  SRR4302543.3899100/94‑1 (MQ=60)

                                                                                      CACGATCCCCTAACCCAGGCCCGTAACCAGTTGCTTGGTATGGCGGCGCAACATCCTGCCAGCTTAGTCAGCGTGCGCCCTAATGGCCTGGAAG        <  SRR4302543.691219/94‑1 (MQ=60)

                                                                                      CACGATACCCTAACCCAGGCCCGTAACCAGTTGCTTGGTATGGCGGCGCAACATCCTGCCAGCTTAGTCAGCGTGCGCCCTAATGGCCTGGAAG        <  SRR4302543.1767656/94‑1 (MQ=60)

                                                                                      CACGATACCCTAACCCAGGCCCGTAACCAGTTGCTTGGTATGGCGGCGCAACATCCTGCCAGCTTAGTCAGCGTGCGCCCTAATGGCCTGGAAG        <  SRR4302543.576832/94‑1 (MQ=60)

                                                                                      CACGATACCCTAACCCAGGCCCGTAACCAGTTGCTTGGTATGGCGGCGCAACATCCTGCCAGCTTAGTCAGCGTGCGCCCTAATGGCCTGGAAG        <  SRR4302543.2672592/94‑1 (MQ=60)

                                                                                      CACGATACCCTAACCCAGGCCCGTAACCAGTTGCTTGGTATGGCGGCGCAACATCCTGCCAGCTTAGTCAGCGTGCGCCCTAATGGCCTGGAAG        <  SRR4302543.5969582/94‑1 (MQ=60)

                                                                                       ACGATACCCTAACCCAGGCCCGTAACCAGTTGCTTGGTATGGCGGCGCAACATCCTGCCAGCTTAGTCAGCGTGCGCCCTAATGGCCTGGAAGA       <  SRR4302543.7712/94‑1 (MQ=60)

                                                                                         GATTCCCTAACCCAGTCCCGTAACCAGTTGCTTGGTATGGCGGCGCAACATCCTGCCAGCTTAGTCAGCGTGCGCCCTAATGGCCTGGAAGACA     <  SRR4302543.7980324/94‑1 (MQ=60)

                                                                                         GATACCCTAACCCAGGCCCGTAACCAGTTGCTTGGTATGGCGGCGCAACATCCTGCCAGCTTAGTCAGCGTGCGCCCTAATGGCCTGGAAGACA     <  SRR4302543.4459468/94‑1 (MQ=60)

                                                                                         GATACCCTAACCCAGGCCCGTAACCAGTTGCTTGGTATGGCGGCGCAACATCCTGCCAGCTTAGTCAGCGTGCGCCCTAATGGCCTGGAAGACA     >  SRR4302543.4995361/1‑94 (MQ=60)

                                                                                         GATACCCTAACCCAGGCCCGTAACCAGTTGCTTGGTATGGCGGCGCAACATCCTGCCAGCTTAGTCAGCGTGCGCCCTAATGGCCTGGAAGACA     <  SRR4302543.1092463/94‑1 (MQ=60)

                                                                                          ATACCCTAACCCAGGCCCGTAACCAGTTGCTTGGTATGGCGGCGCAACATCCTGCCAGCTTAGTCAGCGTGCGCCCTAATGGCCTGGAAGACAC    <  SRR4302543.222018/94‑1 (MQ=60)

                                                                                          ATACCCTAACCCAGGCCCGTAACCAGTTGCTTGGTATGGCGGCGCAACATCCTGCCAGCTTAGTCAGCGTGCGCCCTAATGGCCTGGAAGACAC    <  SRR4302543.4406088/94‑1 (MQ=60)

                                                                                           TACCCTAACCCAGGCCCGTAACCAGTTGCTTGGTATGGCGGCGCAACATCCTGCCAGCTTAGTTAGCGTGCGCCCTCATGGCCTGGAAGACACC   >  SRR4302543.7138580/1‑94 (MQ=60)

                                                                                           TACCCTAACCCAGGCCCGTAACCAGTTGCTTGGTATGGCGGCGCAACATCCTGCCAGCTTAGTCAGCGTGCGCCCTAATGGCCTGGAAGACACC   >  SRR4302543.7138581/1‑94 (MQ=60)

                                                                                           TACCCTAACCCAGGCCCGTAACCAGTTGCTTGGTATGGCGGCGCAACATCCTGCCAGCTTAGTCAGCGTGCGCCCTAATGGCCTGGAAGACACC   <  SRR4302543.4601811/94‑1 (MQ=60)

                                                                                            ACCCTAACCCAGGCCCGTAACCAGTTGCTTGGTATGGCGGCGCAACATCCTGCCAGCTTAGTCAGCGTGCGCCCTAATGGCCTGGAAGACACCG  <  SRR4302543.3714974/94‑1 (MQ=60)

                                                                                            ACCCTAACCCAGGCCCGTAACCAGTTGCTTGGTATGGCGGCGCAACATCCTGCCAGCTTAGTCAGCGTGCGCCCTAATGGCCTGGAAGACACCG  >  SRR4302543.4019911/1‑94 (MQ=60)

                                                                                            ACCCTAACCCAGGCCCGTAACCAGTTGCTTGGTATGGCGGCGCAACATCCTGCCAGCTTAGTCAGCGTGCGCCCTAATGGCCTGGAAGACACCG  <  SRR4302543.4830944/94‑1 (MQ=60)

                                                                                            ACCCTAACCCAGGCCCGTAACCAGTTGCTTGGTATGGCGGCGCAACATCCTGCCAGCTTAGTCAGCGTGCGCCCTAATGGCCTGGAAGACACCG  <  SRR4302543.5597996/94‑1 (MQ=60)

TCATTCCATTCAATATGCCAGCCATTGTTGAACTGGGCACGGCAACGGGTTTCGACTTTGAGTTAATTGATCAGGCTGGGCTGGGTCACGATGCCCTAACCCAGGCCCGTAACCAGTTGCTTGGTATGGCGGCGCAACATCCTGCCAGCTTAGTCAGCGTGCGCCCTAATGGCCTGGAAGACACCG  >  NC_000913/3414654‑3414839

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 0 ≤` `ATCG/ATCG` `< 7 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`