Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A1 F1 I1 R1 1696 279.3 15874187 97.8% 15524954 93.0

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 3,439,191 T→C H41R (CAC→CGC)  rpsD ← 30S ribosomal subunit protein S4

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009133,439,1910TC99.5% 1274.8 / ‑5.1 408H41R (CAC→CGC) rpsD30S ribosomal subunit protein S4
Reads supporting (aligned to +/- strand):  ref base T (0/2);  new base C (185/221);  total (185/223)
Fisher's exact test for biased strand distribution p-value = 5.03e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.99e-01

Only 100 of 420 total aligned reads displayed.

TGACGCTCCAGCACACCATAGATACGGCGAACTTTTTGCTTTTCACGCAACTGCACACCATAGTCAGACAGACGCGGTTTACGCGCACCGTGCTGGCCAGGAGCTTGTTCAATTTTACACTTGGTATCGATCGCGCGAACGCCAGACTTAAGGAATAAGTCGGTGCCCTCACGACGGCTC  >  NC_000913/3439101‑3439280
                                                                                          |                                                                                         
tGACGCTCCAGCACACCATAGATACGGCGAACTTTTTGCTTTTCACGCAACTGCACACCATAGTCAGACAGACGCGGTTTACGCGCACCgcgc                                                                                         >  1:1560294/1‑93 (MQ=255)
 taCGCTCCAGCACACCATAGATACGGCGAACTTTTTGCTTTTCACGCAACTGCACACCATAGTCAGACAGACGCGGTTTACGCGCACCGCGCt                                                                                        <  1:2626427/92‑1 (MQ=255)
  aCGCTCCAGCACACCATAGATACGGCGAACTTTTTGCTTTTCACGCAACTGCACACCATAGTCAGACAGACGCGGTTTACGCGCACCGCGCTg                                                                                       >  2:3939384/1‑93 (MQ=255)
    gCTCCAGCACACCATAGATACGGCGAACTTTTTGCTTTTCACGCAACTGCACACCATAGTCAGACAGACGCGGTTTACGCGCACCGCGCTGGc                                                                                     >  2:7752136/1‑93 (MQ=255)
     cTCCAGCACACCATAGATACGGCGAACTTTTTGCTTTTCACGCAACTGCACACCATAGTCAGACAGACGCGGTTTACGCGCACCGCGCTGGcc                                                                                    <  1:5021959/93‑1 (MQ=255)
      tCCAGCACACCATAGATACGGCGAACTTTTTGCTTTTCACGCAACTGCACACCATAGTCAGACAGACGCGGTTTACGCGCACCGCGCTGGCCa                                                                                   <  2:758154/93‑1 (MQ=255)
        cAGCACACCATAGATACGGCGAACTTTTTGCTTTTCACGCAACTGCACACCATAGTCAGACAGACGCGGTTTACGCGCACCGCGCTGGCCAgg                                                                                 >  2:2603757/1‑93 (MQ=255)
        cAGCACACCATAGATACGGCGAACTTTTTGCTTTTCACGCAACTGCACACCATAGTCAGACAGACGCGGTTTACGCGCACCGCGCTGGCCAgg                                                                                 >  1:797150/1‑93 (MQ=255)
         aGCACACCATAGATACGGCGAACTTTTTGCTTTTCACGCAACTGCACACCATAGTCAGACAGACGCGGTTTACGCGCACCGCGCTGGCCAGGa                                                                                <  1:139454/93‑1 (MQ=255)
         aGCACACCATAGATACGGCGAACTTTTTGCTTTTCACGCAACTGCACACCATAGTCAGACAGACGCGGTTTACGCGCACCGCGCTGGCCAGGa                                                                                >  1:7644979/1‑93 (MQ=255)
          gCACACCATAGATACGGCGAACTTTTTGCTTTTCACGCAACTGCACACCATAGTCAGACAGACGCGGTTTACGCGCACCGCGCTGGCCAGGAg                                                                               >  1:7758307/1‑93 (MQ=255)
          gCACACCATAGATACGGCGAACTTTTTGCTTTTCACGCAACTGCACACCATAGTCAGACAGACGCGGTTTACGCGCACCGCGCTGGCCAGGAg                                                                               <  2:6362464/93‑1 (MQ=255)
            acacCATAGATACGGCGAACTTTTTGCTTTTCACGCAACTGCACACCATAGTCAGACAGACGCGGTTTACGCGCACCGCGCTGGCCAGGAGCt                                                                             >  2:624181/1‑93 (MQ=255)
            acacCATAGATACGGCGAACTTTTTGCTTTTCACGCAACTGCACACCATAGTCAGACAGACGCGGTTTACGCGCACCGCGCTGGCCAGGAGCt                                                                             >  1:32381/1‑93 (MQ=255)
            acacCATAGATACGGCGAACTTTTTGCTTTTCACGCAACTGCACACCATAGTCAGACAGACGCGGTTTACGCGCACCGCGCTGGCCAGGAGCt                                                                             >  1:7773398/1‑93 (MQ=255)
            acacCATAGATACGGCGAACTTTTTGCTTTTCACGCAACTGCACACCATAGTCAGACAGACGCGGTTTACGCGCACCGCGCTGGCCAGGAGCt                                                                             <  2:3601364/93‑1 (MQ=255)
            acacCATAGATACGGCGAACTTTTTGCTTTTCACGCAACTGCACACCATAGTCAGACAGACGCGGTTTACGCGCACCGCGCTGGCCAGGAGCt                                                                             >  2:2451215/1‑93 (MQ=255)
            acacCATAGATACGGCGAACTTTTTGCTTTTCACGCAACTGCACACCATAGTCAGACAGACGCGGTTTACGCGCACCGCGCTGGCAAGGAGCt                                                                             >  2:7271438/1‑93 (MQ=255)
             cacCATAGATACGGCGAACTTTTTGCTTTTCACGCAACTGCACACCATAGTCAGACAGACGCGGTTTACGCGCACCGCGCTGGCCAGGAGCtt                                                                            <  1:233787/93‑1 (MQ=255)
             cacCATAGATACGGCGAACTTTTTGCTTTTCACGCAACTGCACACCATAGTCAGACAGACGCGGTTTACGCGCACCGCGCTGGCCAGGAGCtt                                                                            <  1:3706598/93‑1 (MQ=255)
             cacCATAGATACGGCGAACTTTTTGCTTTTCACGCAACTGCACACCATAGTCAGACAGACGCGGTTTACGCGCACCGCGCTGGCCAGGAGCtt                                                                            >  1:7419002/1‑93 (MQ=255)
                cATAGATACGGCGAACTTTTTGCTTTTCACGCAACTGCACACCATAGTCAGACAGACGCGGTTTACGCGCACCGCGCTGGCCAGGAGCTTGtt                                                                         >  1:1142109/1‑93 (MQ=255)
                 aTAGATACGGCGAACTTTTTGCTTTTCACGCAACTGCACACCATAGTCAGACAGACGCGGTTTACGCGCACCGCGCTGGCCAGGAGCTTGTTc                                                                        >  1:5554251/1‑93 (MQ=255)
                  tAGATACGGCGAACTTTTTGCTTTTCACGCAACTGCACACCATAGTCAGACAGACGCGGTTTACGCGCACCGCGCTGGCCAGGAGCTTGTTCa                                                                       >  2:156212/1‑93 (MQ=255)
                    gATACGGCGAACTTTTTGCTTTTCACGCAACTGCACACCATAGTCAGACAGACGCGGTTTACGCGCACCGCGCTGGCCAGGAGCTTGTTCAAt                                                                     <  1:4037279/93‑1 (MQ=255)
                    gATACGGCGAACTTTTTGCTTTTCACGCAACTGCACACCATAGTCAGACAGACGCGGTTTACGCGCACCGCGCTGGCCAGGAGCTTGTTCAAt                                                                     >  2:1762345/1‑93 (MQ=255)
                    gATACGGCGAACTTTTTGCTTTTCACGCAACTGCACACCATAGTCAGACAGACGCGGTTTACGCGCACCGCGCTGGCCAGGAGCTTGTTCAAt                                                                     >  1:4687250/1‑93 (MQ=255)
                     aTACGGCGAACTTTTTGCTTTTCACGCAACTGCACACCATAGTCAGACAGACGCGGTTTACGCGCACCGCGCTGGCCAGGAGCTTGTTCAAtt                                                                    <  1:1983945/93‑1 (MQ=255)
                      tACGGCGAACTTTTTGCTTTTCACGCAACTGCACACCATAGTCAGACAGACGCGGTTTACGCGCACCGCGCTGGCCAGGAGCTTGTTCAAttt                                                                   <  2:3019599/93‑1 (MQ=255)
                         ggCGAACTTTTTGCTTTTCACGCAACTGCACACCATAGTCAGACAGACGCGGTTTACGCGCACCGCGCTGGCCAGGAGCTTGTTCAATTTTac                                                                >  2:6792233/1‑93 (MQ=255)
                          gCGAACTTTTTGCTTTTCACGCAACTGCACACCATAGTCAGACGGACGCGGTTTACGCGCACCGCGCTGCCCAGGAGCTTGTTCAATTTTaca                                                               <  1:5351048/93‑1 (MQ=255)
                          gCGAACTTTTTGCTTTTCACGCAACTGCACACCATAGTCAGACAGACGCGGTTTACGCGCACCGCGCTGGCCAGGAGCTTGTTCAATTTTaca                                                               <  1:3606518/93‑1 (MQ=255)
                          gCGAACTTTTTGCTTTTCACGCAACTGCACACCATAGTCAGACAGACGCGGTTTACGCGCACCGCGCTGGCCAGGAGCTTGTTCAATTTTaca                                                               <  2:5654167/93‑1 (MQ=255)
                           cGAACTTTTTGCTTTTCACGCAACTGCACACCATAGTCAGACAGACGCGGTTTACGCGCACCGCGCTGGCCAGGAGCTTGTTCAATTTTacac                                                              <  2:3242254/93‑1 (MQ=255)
                            gAACTTTTTGCTTTTCACGCAACTGCACACCATAGTCAGACAGACGCGGTTTACGCGCACCGCGCTGGCCAGGAGCTTGTTCAATTTTACACt                                                             <  1:7898795/93‑1 (MQ=255)
                            gAACTTTTTGCTTTTCACGCAACTGCACACCATAGTCAGACAGACGCGGTTTACGCGCACCGCGCTGGCCAGGAGCTTGTTCAATTTTACACt                                                             >  1:6371946/1‑93 (MQ=255)
                            gAACTTTTTGCTTTTCACGCAACTGCACACCATAGTCAGACAGACGCGGTTTACGCGCACCGCGCTGGCCAGGAGCTTGTTCAATTTTACACt                                                             <  1:4902140/93‑1 (MQ=255)
                             aaCTTTTTGCTTTTCACGCAACTGCACACCATAGTCAGACAGACGCGGTTTACGCGCACCGCGCTGGCCAGGAGCTTGTTCAATTTTACACtt                                                            >  2:2055933/1‑93 (MQ=255)
                             aaCTTTTTGCTTTTCACGCAACTGCACACCATAGTCAGACAGACGCGGTTTACGCGCACCGCGCTGGCCAGGAGCTTGTTCAATTTTACACtt                                                            <  2:1363764/93‑1 (MQ=255)
                             aaCTTTTTGCTTTTCACGCAACTGCACACCATAGTCAGACAGACGCGGTTTACGCGCACCGCGCTGGCCAGGAGCTTGTTCAATTTTACACtt                                                            <  2:1596322/93‑1 (MQ=255)
                              aCTTTTTGCTTTTCACGCAACTGCACACCATAGTCAGACAGACGCGGTTTACGCGCACCGCGCTGGCCAGGAGCTTGTTCAATTTTACACTTg                                                           <  1:6571343/93‑1 (MQ=255)
                              aCTTTTTGCTTTTCACGCAACTGCACACCATAGTCAGACAGACGCGGTTTACGCGCACCGCGCTGGCCAGGAGCTTGTTCAATTTTACACTTg                                                           <  1:971655/93‑1 (MQ=255)
                              aCTTTTTGCTTTTCACGCAACTGCACACCATAGTCAGACAGACGCGGTTTACGCGCACCGCGCTGGCCAGGAGCTTGTTCAATTTTACACTTg                                                           <  1:5224036/93‑1 (MQ=255)
                                tttttGCTTTTCACGCAACTGCACACCATAGTCAGACAGACGCGGTTTACGCGCACCGCGCTGGCCAGGAGCTTGTTCAATTTTACACTTGGt                                                         >  2:3776061/1‑93 (MQ=255)
                                tttttGCTTTTCACGCAACTGCACACCATAGTCAGACAGACGCGGTTTACGCGCACCGCGCTGGCCAGGAGCTTGTTCAATTTTACACTTGGt                                                         >  1:4955454/1‑93 (MQ=255)
                                 ttttGCTTTTCACGCAACTGCACACCATAGTCAGACAGACGCGGTTTACGCGCACCGCGCTGGCCAGGAGCTTGTTCAATTTTACACTTGGTa                                                        <  2:214642/93‑1 (MQ=255)
                                 ttttGCTTTTCACGCAACTGCACACCATAGTCAGACAGACGCGGTTTACGCGCACCGCGCTGGCCAGGAGCTTGTTCAATTTTACACTTGGTa                                                        <  2:6940273/93‑1 (MQ=255)
                                  tttGCTTTTCACGCAACTGCACACCATAGTCAGACAGACGCGGTTTACGCGCACCGCGCTGGCCAGGAGCTTGTTCAATTTTACACTTGGTat                                                       <  2:3395587/93‑1 (MQ=255)
                                   ttGCTTTTCACGCAACTGCACACCATAGTCAGACAGACGCGGTTTACGCGCACCGCGCTGGCCAGGAGCTTGTTCAATTTTACACTTGGTatc                                                      <  1:2718368/93‑1 (MQ=255)
                                     gCTTTTCACGCAACTGCACACCATAGTCAGACAGACGCGGTTTACGCGCACCGCGCTGGCCAGGAGCTTGTTCAATTTTACACTTGGTatcga                                                    <  2:1680093/93‑1 (MQ=255)
                                     gCTTTTCACGCAACTGCACACCATAGTCAGACAGACGCGGTTTACGCGCACCGCGCTGGCCAGGAGCTTGTTCAATTTTACACTTGGTatcga                                                    >  1:4361887/1‑93 (MQ=255)
                                      cTTTTCACGCAACTGCACACCATAGTCAGACAGACGCGGTTTACGCGCACCGCGCTGGCCAGGAGCTTGTTCAATTTTACACTTGGTatcgat                                                   <  2:6634923/93‑1 (MQ=255)
                                      cTTTTCACGCAACTGCACACCATAGTCAGACAGACGCGGTTTACGCGCACCGCGCTGGCCAGGAGCTTGTTCAATTTTACACTTGGTatcgat                                                   <  1:680449/93‑1 (MQ=255)
                                      cTTTTCACGCAACTGCACACCATAGTCAGACAGACGCGGTTTACGCGCACCGCGCTGGCCAGGAGCTTGTTCAATTTTACACTTGGTatcgat                                                   <  2:3679922/93‑1 (MQ=255)
                                      cTTTTCACGCAACTGCACACCATAGTCAGACAGACGCGGTTTACGCGCACCGCGCTGGCCAGGAGCTTGTTCAATTTTACACTTGGTatcgat                                                   >  1:6422575/1‑93 (MQ=255)
                                             cGCAACTGCACACCATAGTCAGACAGACGCGGTTTACGCGCACCGCGCTGGCCAGGAGCTTGTTCAATTTTACACTTGGTATCGATCGCGCGa                                            <  2:4069695/93‑1 (MQ=255)
                                              gCAACTGCACACCATAGTCAGACAGACGCGGTTTACGCGCACCGCGCTGGCCAGGAGCTTGTTCAATTTTACACTTGGTATCGATCGCGCGaa                                           <  1:6294796/93‑1 (MQ=255)
                                              gCAACTGCACACCATAGTCAGACAGACGCGGTTTACGCGCACCGCGCTGGCCAGGAGCTTGTTCAATTTTACACTTGGTATCGATCGCGCGaa                                           <  2:5802072/93‑1 (MQ=255)
                                              gCAACTGCACACCATAGTCAGACAGACGCGGTTTACGCGCACCGCGCTGGCCAGGAGCTGGTTCAATTTTACACTTGGTATCGATCGCGCGaa                                           <  1:168572/93‑1 (MQ=255)
                                                 aCTGCACACCATAGTCAGACAGACGCGGTTTACGCGCACCGCGCTGGCCAGGAGCTTGTTCAATTTTACACTTGGTATCGATCGCGCGAACGc                                        >  2:1082894/1‑93 (MQ=255)
                                                 aCTGCACACCATAGTCAGACAGACGCGGTTTACGCGCACCGCGCTGGCCAGGAGCTTGTTCAATTTTACACTTGGTATCGATCGCGCGAACGc                                        <  2:2757764/93‑1 (MQ=255)
                                                  cTGCACACCATAGTCAGACAGACGCGGTTTACGCGCACCGCGCTGGCCAGGAGCTTGTTCAATTTTACACTTGGTATCGATCGCGCGAACGcg                                       >  1:5126806/1‑92 (MQ=255)
                                                   tGCACACCATAGTCAGACAGACGCGGTTTACGCGCACCGCGCTGGCCAGGAGCTTGTTCAATTTTACACTTGGTATCGATCGCGCGAACGCCa                                      >  1:3125209/1‑93 (MQ=255)
                                                    gCACACCATAGTCAGACAGACGCGGTTTACGCGCACCGCGCTGGCCAGGAGCTTGTTCAATTTTACACTTGGTATCGATCGCGCGAACGCCAg                                     >  1:2942826/1‑93 (MQ=255)
                                                         ccATAGTCAGACAGACGCGGTTTACGCGCACCGCGCTGGCCAGGAGCTTGTTCAATTTTACACTTGGTATCGATCGCGCGAACGCCAGACTTa                                <  2:5440246/93‑1 (MQ=255)
                                                          cATAGTCAGACAGACGCGGTTTACGCGCACCGCGCTGGCCAGGAGCTTGTTCAATTTTACACTTGGTATCGATCGCGCGAACGCCAGACTTaa                               <  2:6109818/93‑1 (MQ=255)
                                                           aTAGTCAGACAGACGCGGTTTACGCGCACCGCGCTGGCCAGGAGCTTGTTCAATTTTACACTTGGTATCGATCGCGCGAACGCCAGACTTAAg                              >  2:4896201/1‑93 (MQ=255)
                                                            tAGTCAGACAGACGCGGTTTACGCGCACCGCGCTGGCCAGGAGCTTGTTCAATTTTACACTTGGTATCGATCGCGCGAACGCCAGACTTAAgg                             <  2:5014521/93‑1 (MQ=255)
                                                             aGTCAGACAGACGCGGTTTACGCGCACCGCGCTGGCCAGGAGCTTGTTCAATTTTACACTTGGTATCGATCGCGCGAACGCCAGACTTAAGGa                            <  2:7108946/93‑1 (MQ=255)
                                                               tCAGACAGACGCGGTTTACGCGCACCGCGCTGGCCAGGAGCTTGTTCAATTTTACACTTGGTATCGATCGCGCGAACGCCAGACTTAAGGAAt                          <  2:3852904/93‑1 (MQ=255)
                                                                cagacagaCGCGGTTTACGCGCAACGCGCTGGCCAGGAGCTTGTTCAATTTTACACTTGGTATCGATCGCGCGAACGCCAGACTTAAGGAATa                         <  2:4352357/93‑1 (MQ=255)
                                                                 aggcagacGCGGTTTACGCGCACCGGGCTGGCCAGGAGCTTGTTCAATTTTACACTTGGTATCGATCGCGCGAACGCCAGACTTAAGGAATaa                        <  2:6585631/90‑1 (MQ=255)
                                                                 agacagacGCGGTTTACGCGCACCGCGCTGGCCAGGAGCTTGTTCAATTTTACACTTGGTATCGATCGCGCGAACGCCAGACTTAAGGAATaa                        <  2:4528351/93‑1 (MQ=255)
                                                                  gacagacGCGGTTTACGCGCACCGCGCTGGCCAGGAGCTTGTTCAATTTTACACTTGGTATCGATCGCGCGAACGCCAGACTTAAGGAATAAg                       >  1:1290659/1‑93 (MQ=255)
                                                                   acagacGCGGTTTACGCGCACCGCGCTGGCCAGGAGCTTGTTCAATTTTACACTTGGTATCGATCGCGCGAACGCCAGACTTAAGGAATAAGt                      >  1:3344456/1‑93 (MQ=255)
                                                                   acagacGCGGTTTACGCGCACCGCGCTGGCCAGGAGCTTGTTCAATTTTACACTTGGTATCGATCGCGCGAACGCCAGACTTAAGGAATAAGt                      >  1:1820475/1‑93 (MQ=255)
                                                                     agacGCGGTTTACGCGCACCGCGCTGGCCAGGAGCTTGTTCAATTTTACACTTGGTATCGATCGCGCGAACGCCAGACTTAAGGAATAAGTCg                    >  2:7895210/1‑93 (MQ=255)
                                                                      gacGCGGTTTACGCGCACCGCGCTGGCCAGGAGCTTGTTCAATTTTACACTTGGTATCGATCGCGCGAACGCCAGACTTAAGGAATAAGTCgg                   <  2:4272155/93‑1 (MQ=255)
                                                                      gacGCGGTTTACGCGCACCGCGCTGGCCAGGAGCTTGTTCAATTTTACACTTGGTATCGATCGCGCGAACGCCAGACTTAAGGAATAAGTCgg                   >  1:2255385/1‑93 (MQ=255)
                                                                      gacGCGGTTTACGCGCACCGCGCTGGCCAGGAGCTTGTTCAATTTTACACTTGGTATCGATCGCGCGAACGCCAGACTTAAGGAATAAGTCgg                   >  1:2101243/1‑93 (MQ=255)
                                                                      gacGCGGTTTACGCGCACCGCGCTGGCCAGGAGCTTGTTCAATTTTACACTTGGTATCGATCGCGCGAACGCCAGACTTAAGGAATAAGTCgg                   <  2:4810384/93‑1 (MQ=255)
                                                                       acGCGGTTTACGCGCACCGCGCTGGCCAGGAGCTTGTTCAATTTTACACTTGGTATCGATCGCGCGAACGCCAGACTTAAGGAATAAGTCGGt                  <  2:5232308/93‑1 (MQ=255)
                                                                          cgGTTTACGCGCACCGCGCTGGCCAGGAGCTTGTTCAATTTTACACTTGGTATCGATCGCGCGAACGCCAGACTTAAGGAATAAGTCGGTGcc               >  1:1015875/1‑93 (MQ=255)
                                                                           ggTTTACGCGCACCGCGCTGGCCAGGAGCTTGTTCAATTTTACACTTGGTATCGATCGCGCGAACGCCAGACTTAAGGAATAAGTCGGTGccc              >  2:5951232/1‑93 (MQ=255)
                                                                             tttACGCGCACCGCGCTGGCCAGGAGCTTGTTCAATTTTACACTTGGTATCGATCGCGCGAACGCCAGACTTAAGGAATAAGTCGGTGCCCTc            >  1:4300479/1‑93 (MQ=255)
                                                                             tttACGCGCACCGCGCTGGCCAGGAGCTTGTTCAATTTTACACTTGGTATCGATCGCGCGAACGCCAGACTTAAGGAATAAGTCGGTGCCCTc            <  2:5527887/93‑1 (MQ=255)
                                                                             tttACGCGCACCGCGCTGGCCAGGAGCTTGTTCAATTTTACACTTGGTATCGATCGCGCGAACGCCAGACTTAAGGAATAAGTCGGTGCCCTc            >  1:2491761/1‑93 (MQ=255)
                                                                             tttACGCGCACCGCGCTGGCCAGGAGCTTGTTCAATTTTACACTTGGTATCGATCGCGCGAACGCCAGACTTAAGGAATAAGTCGGTGCCCTc            >  1:7597747/1‑93 (MQ=255)
                                                                              ttACGCGCACCGCGCTGGCCAGGAGCTTGTTCAATTTTACACTTGGTATCGATCGCGCGAACGCCAGACTTAAGGAATAAGTCGGTGCCCTCa           >  1:5986523/1‑93 (MQ=255)
                                                                              ttACGCGCACCGCGCTGGCCAGGAGCTTGTTCAATTTTACACTTGGTATCGATCGCGCGAACGCCAGACTTAAGGAATAAGTCGGTGCCCTCa           <  1:6194518/93‑1 (MQ=255)
                                                                               tACGCGCACCGCGCTGGCCAGGAGCTTGTTCAATTTTACACTTGGTATCGATCGCGCGAACGCCAGACTTAAGGAATAAGTCGGTGCCCTCac          <  2:1235239/93‑1 (MQ=255)
                                                                               tACGCGCACCGCGCTGGCCAGGAGCTTGTTCAATTTTACACTTGGTATCGATCGCGCGAACGCCAGACTTAAGGAATAAGTCGGTGCCCTCac          <  1:7048047/93‑1 (MQ=255)
                                                                               tACGCGCACCGCGCTGGCCAGGAGCTTGTTCAATTTTACACTTGGTATCGATCGCGCGAACGCCAGACTTAAGGAATAAGTCGGTGCCCTCac          <  1:5702565/93‑1 (MQ=255)
                                                                                aCGCGCACCGCGCTGGCCAGGAGCTTGTTCAATTTTACACTTGGTATCGATCGCGCGAACGCCAGACTTAAGGAATAAGTCGGTGCCCTCacg         >  2:5104292/1‑93 (MQ=255)
                                                                                aCGCGCACCGCGCTGGCCAGGAGCTTGTTCAATTTTACACTTGGTATCGATCGCGCGAACGCCAGACTTAAGGAATAAGTCGGTGCCCTCacg         >  1:7245734/1‑93 (MQ=255)
                                                                                aCGCGCACCGCGCTGGCCAGGAGCTTGTTCAATTTTACACTTGGTATCGATCGCGCGAACGCCAGACTTAAGGAATAAGTCGGTGCCCTCacg         >  1:3018613/1‑93 (MQ=255)
                                                                                 cgcgCACCGCGCTGGCCAGGAGCTTGTTCAATTTTACACTTGGTATCGATCGCGCGAACGCCAGACTTAAGGAATAAGTCGGTGCCCTCacga        <  2:462522/93‑1 (MQ=255)
                                                                                  gcgcACCGCGCTGGCCAGGAGCTTGTTCAATTTTACACTTGGTATCGATCGCGCGAACGCCAGACTTAAGGAATAAGTCGGTGCCCTCacgac       <  1:6665386/93‑1 (MQ=255)
                                                                                  gcgcACCGCGCTGGCCAGGAGCTTGTTCAATTTTACACTTGGTATCGATCGCGCGAACGCCAGACTTAAGGAATAAGTCGGTGCCCTCacgac       >  1:1213169/1‑93 (MQ=255)
                                                                                   cgcACCGCGCTGGCCAGGAGCTTGTTCAATTTTACACTTGGTATCGATCGCGCGAACGCCAGACTTAAGGAATAAGTCGGTGCCCTCacgacg      <  1:4770614/93‑1 (MQ=255)
                                                                                          |                                                                                         
TGACGCTCCAGCACACCATAGATACGGCGAACTTTTTGCTTTTCACGCAACTGCACACCATAGTCAGACAGACGCGGTTTACGCGCACCGTGCTGGCCAGGAGCTTGTTCAATTTTACACTTGGTATCGATCGCGCGAACGCCAGACTTAAGGAATAAGTCGGTGCCCTCACGACGGCTC  >  NC_000913/3439101‑3439280

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

BRESEQ :: bam2aln output Only 200 of 229 total aligned reads displayed.
ACTGACGCTCCAGCACACCATAGATACGGCGAAC‑TTTTTGCTTTTCACGCAACTGCACACCATAGTCAGACAGACGCGGTTTACGCGCACCGTGCTGGCCAGGAGCTTGTTCAATTTTACACTTGGTATCGATCGCGCGAACGCCAGACTTAAGGAATAAGTCGGTGCCCTCACGACGGCTCAGCT  >  NC_000913/3439099‑3439284
                                                                                             |                                                                                             
 CTGACGCTCCAGCACACCATAGATACGGCGAAC‑TTTTTGCTTTTCACGCAACTGCACACCATAGTCAGACAGACGCGGTTTACGCGCACCGCGC                                                                                             >  SRR4302543.6307435/1‑94 (MQ=60)
 CTGACGCTCCAGCACACCATAGATACGGCGAAC‑TTTTTGCTTTTCACGCAACTGCACACCATAGTCAGACAGACGCGGTTTACGCGCACCGCGC                                                                                             >  SRR4302543.1574228/1‑94 (MQ=60)
  TGACGCTCCAGCACACCATAGATACGGCGAAC‑TTTTTGCTTTTCACGCAACTGCACACCATAGTCAGACAGACGCGGTTTACGCGCACCGCGCT                                                                                            >  SRR4302543.1795665/1‑94 (MQ=60)
  TGACGCTCCAGCACACCATAGATACGGCGAAC‑TTTTTGCTTTTCACGCAACTGCACACCATAGTCAGACAGACGCGGTTTACGCGCACCGCGCT                                                                                            >  SRR4302543.3149928/1‑94 (MQ=60)
  TGACGCTCCAGCACACCATAGATACGGCGAAC‑TTTTTGCTTTTCACGCAACTGCACACCATAGTCAGACAGACGCGGCTTACGCGCACCGCGCT                                                                                            >  SRR4302543.1501216/1‑94 (MQ=60)
   TACGCTCCAGCACACCATAGATACGGCGAAC‑TTTTTGCTTTTCACGCAACTGCACACCATAGTCAGACAGACGCGGTTTACGCGCACCGCGCTG                                                                                           <  SRR4302543.2650198/94‑1 (MQ=60)
   GACGCTCCAGCACACCATAGATACGGCGAAC‑TTTTTGCTTTTCACGCAACTGCACACCATAGTCAGACAGACGCGGTTTACGCGCACCGCGCTG                                                                                           <  SRR4302543.7561725/94‑1 (MQ=60)
     CGCTCCAGCACACCATAGATACGGCGAAC‑TTTTTGCTTTTCACGCAACTGCACACCATAGTCAGACAGACGCGGTTTACGCGCACCGCGCTGGC                                                                                         >  SRR4302543.3669001/1‑94 (MQ=60)
     CGCTCCAGCACACCATAGATACGGCGAAC‑TTTTTGCTTTTCACGCAACTGCACACCATAGTCAGACAGACGCGGTTTACGCGCACCGCGCTGGC                                                                                         <  SRR4302543.5136694/94‑1 (MQ=60)
      GCTCCAGCACACCATAGATACGGCGAAC‑TTTTTGCTTTTCACGCAACTGCACACCATAGTCAGACAGACGCGGTTTACGCGCACCGCGCTGGCC                                                                                        >  SRR4302543.5940742/1‑94 (MQ=60)
       CTCCAGCACACCATAGATACGGCGAAC‑TTTTTGCTTTTCACGCAACTGCACACCATAGTCAGACAGACGCGGTTTACGCGCACCGCGCTGGCCA                                                                                       <  SRR4302543.5067662/94‑1 (MQ=60)
       CTCCAGCACACCATAGATACGGCGAAC‑TTTTTGCTTTTCACGCAACTGCACACCATAGTCAGACAGACGCGGTTTACGCGCACCGCGCTGGCCA                                                                                       <  SRR4302543.5067661/94‑1 (MQ=60)
       CTCCAGCACACCATAGATACGGCGAAC‑TTTTTGCTTTTCACGCAACTGCACACCATAGTCAGACAGACGCGGTTTACGCGCACCGCGCTGGCCA                                                                                       <  SRR4302543.6460704/94‑1 (MQ=60)
        CCCAGCACACCATAGATACGGCGAACTTTTTTGCTTTTCACGCAACTGCACACCATAGTCAGACAGACGCGGTTTACGCGCACCGCGCTGGCCA                                                                                       <  SRR4302543.6629594/94‑1 (MQ=60)
         CCAGCACACCATAGATACGGCGAAC‑TTTTTGCTTTTCACGCAACTGCACACCATAGTCAGACAGACGCGGTTTACGCGCACCGCGCTGGCCAGG                                                                                     <  SRR4302543.1864611/94‑1 (MQ=60)
         CCAGCACACCATAGATACGGCGAAC‑TTTTTGCTTTTCACGCAACTGCACACCATAGTCAGACAGACGCGGTTTACGCGCACCGCGCTGGCCAGG                                                                                     >  SRR4302543.3202611/1‑94 (MQ=60)
         CCAGCACACCATAGATACGGCGAAC‑TTTTTGCTTTTCACGCAACTGCACACCATAGTCAGACAGACGCGGTTTACGCGCACCGCGCTGGCCAGG                                                                                     <  SRR4302543.3479901/94‑1 (MQ=60)
         CCAGCACACCATAGATACGGCGAAC‑TTTTTGCTTTTCACGCAACTGCACACCATAGTCAGACAGACGCGGTTTACGCGCACCGCGCTGGCCAGG                                                                                     >  SRR4302543.4971508/1‑94 (MQ=60)
         CCAGCACACCATAGATACGGCGAAC‑TTTTTGCTTTTCACGCAACTGCACACCATAGTCAGACAGACGCGGTTTACGCGCACCGCGCTGGCCAGG                                                                                     >  SRR4302543.804156/1‑94 (MQ=60)
          CAGCACACCATAGATACGGCGAAC‑TTTTTGCTTTTCACGCAACTGCACATCATAGTCAGACAGACGCGGTTTACGCGCACCGCGCTGGCCAGGA                                                                                    <  SRR4302543.4744136/94‑1 (MQ=60)
          CAGCACACCATAGATACGGCGAAC‑TTTTTGCTTTTCACGCAACTGCACACCATAGTCAGACAGACGCGGTTTACGCGCACCGCGCTGGCCAGGA                                                                                    <  SRR4302543.6783846/94‑1 (MQ=60)
          CAGCACACCATAGATACGGCGAAC‑TTTTTGCTTTTCACGCAACTGCACACCATAGTCAGACAGACGCGGTTTACGCGCACCGCGCTGGCCAGGA                                                                                    >  SRR4302543.7717480/1‑94 (MQ=60)
          CAGCACACCATAGATACGGCGAAC‑TTTTTGCTTTTCACGCAACTGCACACCATAGTCAGACAGACGCGGTTTACGCGCACCGCGCTGGCCAGGA                                                                                    <  SRR4302543.4744137/94‑1 (MQ=60)
           AGCACACCATAGATACGGCGAAC‑TTTTTGCTTTTCACGCAACTGCACACCATAGTCAGACAGACGCGGTTTACGCGCACCGCGCTGGCCAGGAG                                                                                   <  SRR4302543.128352/94‑1 (MQ=60)
           AGCACACCATAGATACGGCGAAC‑TTTTTGCTTTTCACGCAACTGCACACCATAGTCAGACAGACGCGGTTTACGCGCACCGCGCTGGCCAGGAG                                                                                   <  SRR4302543.17785/94‑1 (MQ=60)
           AGCACACCATAGATACGGCGAAC‑TTTTTGCTTTTCACGCAACTGCACACCATAGTCAGACAGACGCGGTTTACGCGCACCGCGCTGGCCAGGAG                                                                                   <  SRR4302543.140677/94‑1 (MQ=60)
           AGCACACCATAGATACGGCGAAC‑TTTTTGCTTTTCACGCAACTGCACACCATAGTCAGACAGACGCGGTTTACGCGCACCGCGCTGGCCAGGAG                                                                                   >  SRR4302543.7831529/1‑94 (MQ=60)
             CACACCATAGATACGGCGAAC‑TTTTTGCTTTTCACGCAACTGCACACCATAGTCAGACAGACGCGGTTTACGCGCACCGCGCTGGCCAGGAGCT                                                                                 >  SRR4302543.32676/1‑94 (MQ=60)
             CACACCATAGATACGGCGAAC‑TTTTTGCTTTTCACGCAACTGCACACCATAGTCAGACAGACGCGGTTTACGCGCACCGCGCTGGCCAGGAGCT                                                                                 >  SRR4302543.316/1‑94 (MQ=60)
             CACACCATAGATACGGCGAAC‑TTTTTGCTTTTCACGCAACTGCACACCATAGTCAGACAGACGCGGTTTACGCGCACCGCGCTGGCCAGGAGCT                                                                                 >  SRR4302543.7846716/1‑94 (MQ=60)
             CACACCATAGATACGGCGAAC‑TTTTTGCTTTTCACGCAACTGCACACCATAGTCAGACAGACGCGGTTTACGCGCACCGCGCTGGCCAGGAGCT                                                                                 >  SRR4302543.2775995/1‑94 (MQ=60)
              ACACCATAGATACGGCGAAC‑TTTTTGCTTTTCACGCAACTGCACACCATAGTCAGACAGACGCGGTTTACGCGCGCCGCGCTGGCCCGGAGCTT                                                                                >  SRR4302543.5684327/1‑94 (MQ=60)
              ACACCATAGATACGGCGAAC‑TTTTTGCTTTTCACGCAACTGCACACCATAGTCAGACAGACGCGGTTTACGCGCACCGCGCTGGCCAGGAGCTT                                                                                <  SRR4302543.5794687/94‑1 (MQ=60)
              ACACCATAGATACGGCGAAC‑TTTTTGCTTTTCACGCAACTGCACACCATAGTCAGACAGACGCGGTTTACGCGCACCGCGCTGGCCAGGAGCTT                                                                                >  SRR4302543.6400667/1‑94 (MQ=60)
              ACACCATAGATACGGCGAAC‑TTTTTGCTTTTCACGCAACTGCACACCATAGTCAGACAGACGCGGTTTACGCGCACCGCGCTGGCCAGGAGCTT                                                                                >  SRR4302543.4851449/1‑94 (MQ=60)
               CACCATAGATACGGCGAAC‑TTTTTGCTTTTCACGCAACTGCACACCATAGTCAGACAGACGCGGTTTACGCGCACCGCGCTGGCCAGGAGCTTG                                                                               <  SRR4302543.6325131/94‑1 (MQ=60)
               CACCATAGATACGGCGAAC‑TTTTTGCTTTTCACGCAACTGCACACCATAGTCAGACAGACGCGGTTTACGCGCACCGCGCTGGCCAGGAGCTTG                                                                               <  SRR4302543.3739179/94‑1 (MQ=60)
                 CCATAGATACGGCGAAC‑TTTTTGCTTTTCACGCAACTGCACACCATAGTCAGACAGACGCGGTTTACGCGCACCGCGCTGGCCAGGAGCTTGTT                                                                             <  SRR4302543.7427067/94‑1 (MQ=60)
                 CCATAGATACGGCGAAC‑TTTTTGCTTTTCACGCAACTGCACACCATAGTCAGACAGACGCGGTTTACGCGCACCGCGCTGGCCAGGAGCTTGTT                                                                             >  SRR4302543.1152513/1‑94 (MQ=60)
                 CCATAGATACGGCGAAC‑TTTTTGCTTTTCACGCAACTGCACACCATAGTCAGACAGACGCGGTTTACGCGCACCGCGCTGGCCAGGAGCTTGTT                                                                             >  SRR4302543.862103/1‑94 (MQ=60)
                  CATAGATACGGCGAAC‑TTTTTGCTTTTCACGCAACTGCACACCATAGTCAGACAGACGCGGTTTACGCGCACCGCGCTGGCCAGGAGCTTGTTC                                                                            >  SRR4302543.5604771/1‑94 (MQ=60)
                   ATAGATACGGCGAAC‑TTTTTGCTTTTCACGCAACTGCACACCATAGTCAGACAGACGCGGTTTACGCGCACCGCGCTGGCCAGGAGCTTGTTCA                                                                           >  SRR4302543.6455503/1‑94 (MQ=60)
                   ATAGATACGGCGAAC‑TTTTTGCTTTTCACGCAACTGCACACCATAGTCAGACAGACGCGGTTTACGCGCACCGCGCTGGCCAGGAGCTTGTTCA                                                                           >  SRR4302543.7820541/1‑94 (MQ=60)
                    TAGATACGGCGAAC‑TTTTTGCTTTTCACGCAACTGCACACCATAGTCAGACAGACGCGGTTTACGCGCACCGCGCTGGCCAGGAGCTTGTTCAA                                                                          <  SRR4302543.5551936/94‑1 (MQ=60)
                     AGATACGGCGAAC‑TTTTTGCTTTTCACGCAACTGCACACCATAGTCAGACAGACGCGGTTTACGCGCACCGCGCTGGCCAGGAGCTTGTTCAAT                                                                         >  SRR4302543.4730021/1‑94 (MQ=60)
                     AGATACGGCGAAC‑TTTTTGCTTTTCACGCAACTGCACACCATAGTCAGACAGACGCGGTTTACGCGCACCGCGCTGGCCAGGAGCTTGTTCAAT                                                                         <  SRR4302543.1967678/94‑1 (MQ=60)
                     AGATACGGCGAAC‑TTTTTGCTTTTCACGCAACTGCACACCATAGTCAGACAGACGCGGTTTACGCGCACCGCGCTGGCCAGGAGCTTGTTCAAT                                                                         <  SRR4302543.775439/94‑1 (MQ=60)
                     AGATACGGCGAAC‑TTTTTGCTTTTCACGCAACTGCACACCATAGTCAGACAGACGCGGCTTACGCGCACCGCGCTGGCCAGGAGCTTGTTCAAT                                                                         >  SRR4302543.147811/1‑94 (MQ=60)
                      GATACGGCGAAC‑TTTTTGCTTTTCACGCAACTGCACACCATAGTCAGACAGACGCGGTTTACGCGCACCGCGCTGGCCAGGAGCTTGTTCAATT                                                                        <  SRR4302543.4073404/94‑1 (MQ=60)
                      GATACGGCGAAC‑TGTTTGCTTTTCACGCAACTGCACACCATAGTCAGACAGACGCGGTTTACGCGCACCGCGCTGGCCAGGAGCTTGTTCAATT                                                                        <  SRR4302543.4073403/94‑1 (MQ=60)
                       ATACGGCGAAC‑TTTTTGCTTTTCACGCAACTGCACACCATAGTCAGACAGACGCGGTTTACGCGCACCGCGCTGGCCAGGAGCTTGTTCAATTT                                                                       <  SRR4302543.2001736/94‑1 (MQ=60)
                       ATACGGCGAAC‑TTTTTGCTTTTCACGCAACTGCACACCATAGTCAGACAGACGCGGTTTACGCGCACCGCGCTGGCCAGGAGCTTGTTCAATTT                                                                       >  SRR4302543.7865373/1‑94 (MQ=60)
                        TACGGCGAAC‑TTTTTGCTTTTCACGCAACTGCACACCATAGTCAGACAGACGCGGTTTACGCGCACCGCGCTGGCCAGGAGCTTGTTCAATTTT                                                                      <  SRR4302543.7629522/94‑1 (MQ=60)
                         ACGGCGAAC‑TTTTTGCTTTTCACGCAACTGCACACCATAGTCAGACAGACGCGGTTTACGCGCACCGCGCTGGCCAGGAGCTTGTTCAATTTTA                                                                     <  SRR4302543.4948390/94‑1 (MQ=60)
                         ACGGCGAAC‑TTTTTGCTTTTCACGCAACTGCACACCATAGTCAGACAGACGCGGTTTACGCGCACCGCGCTGGCCAGGAGCTTGTTCAATTTTA                                                                     <  SRR4302543.2896082/94‑1 (MQ=60)
                         ACGGCGAAC‑TTTTTGCTTGTCACGCAACTGCACACCATAGTCAGACAGACGCGGTTTACGCGCACCGCGCTGGCCAGGAGCTTGTTCAATTTTA                                                                     <  SRR4302543.4948391/94‑1 (MQ=60)
                          CGGCGATG‑TTTTTGCTTTTCACGCAACTGCACACCATAGTCAGACGGACGCGGTTTACGCGCACCGCGCTGTCCAGGAGCTTGTTCAATTTTAC                                                                    <  SRR4302543.2379135/94‑1 (MQ=60)
                          CGGCGAAC‑TTTTTGCTTTTCACGCAACTGCACACCATAGTCAGACAGACGCGGTTTACGCGCACCGCGCTGGCCAGGAGCTTGTTCAATTTTAC                                                                    >  SRR4302543.6128272/1‑94 (MQ=60)
                          CGGCGAAC‑TTTTTGCTTTTCACGCAACTGCACACCATAGTCAGACAGACGCGGTTTACGCGCACCGCGCTGGCCAGGAGCTTGTTCAATTTTAC                                                                    >  SRR4302543.6128273/1‑94 (MQ=60)
                          CGGCGAAC‑TTTTTGCTTTTCACGCAACTGCACACCATAGTCAGACAGACGCGGTTTACGCGCACCGCGCTGGCCAGGAGCTTGTTCAATTTTAC                                                                    >  SRR4302543.680373/1‑94 (MQ=60)
                           GGCGAAC‑TTTTTGCTTTTCACGCAACTGCACACCATAGTCAGACAGACGCGGTTTACGCGCACCGCGCTGGCCAGGAGCTTGTTCAATTTTACA                                                                   >  SRR4302543.1112787/1‑94 (MQ=60)
                           GGCGAAC‑TTTTTGCTTTTCACGCAACTGCACACCATAGTCAGACAGACGCGGTTTACGCGCACCGCGCTGGCCAGGAGCTTGTTCAATTTTACA                                                                   >  SRR4302543.1270868/1‑94 (MQ=60)
                           GGCGAAC‑TTTTTGCTTTTCACGCAACTGCACACCATAGTCAGACAGACGCGGTTTACGCGCACCGCGCTGGCCAGGAGCTTGTTCAATTTTACA                                                                   >  SRR4302543.223407/1‑94 (MQ=60)
                            GCGAAC‑TTTTTGCTTTTCACGCAACTGCACACCATAGTCAGACGGACGCGGTTTACGCGCACCGCGCTGCCCAGGAGCTTGTTCAATTTTACAC                                                                  <  SRR4302543.5399472/94‑1 (MQ=60)
                            GCGAAC‑TTTTTGCTTTTCACGCAACTGCACACCATAGTCAGACAGACGCGGTTTACGCGCACCGCGCTGGCCAGGAGCTTGTTCAATTTTACAC                                                                  <  SRR4302543.3638340/94‑1 (MQ=60)
                            GCGAAC‑TTTTTGCTTTTCACGCAACTGCACACCATAGTCAGACAGACGCGGTTTACGCGCACCGCGCTGGCCAGGAGCTTGTTCAATTTTACAC                                                                  <  SRR4302543.5399474/94‑1 (MQ=60)
                             CGAAC‑TTTTTGCTTTTCACGCAACTGCACACCATAGTCAGACAGACGCGGTTTACGCGCACCGCGCTGGCCAGGAGCTTGTTCAATTTTACACT                                                                 <  SRR4302543.7647213/94‑1 (MQ=60)
                             CGAAC‑TTTTTGCTTTTCACGCAACTGCACACCATAGTCAGACAGACGCGGTTTACGCGCACCGCGCTGGCCAGGAGCTTGTTCAATTTTACACT                                                                 >  SRR4302543.6431884/1‑94 (MQ=60)
                              GAAC‑TTTTTGCTTTTCACGCAACTGCACACCATAGTCAGACAGACGCGGTTTACGCGCACCGCGCTGGCCAGGAGCTTGTTCAATTTTACACTT                                                                <  SRR4302543.4946826/94‑1 (MQ=60)
                              GAAC‑TTTTTGCTTTTCACGCAACTGCACACCATAGTCAGACAGACGCGGTTTACGCGCACCGCGCTGGCCAGGAGCTTGTTCAATTTTACACTT                                                                <  SRR4302543.7973051/94‑1 (MQ=60)
                              GAAC‑TTTTTGCTTTTCACGCAACTGCACACCATAGTCAGACAGACGCGGTTTACGCGCACCGCGCTGGCCAGGAGCTTGTTCAATTTTACACTT                                                                <  SRR4302543.4257762/94‑1 (MQ=60)
                              GAAC‑TTTTTGCTTTTCACGCAACTGCACACCATAGTCAGACAGACGCGGTTTACGCGCACCGCGCTGGCCAGGAGCTTGTTCAATTTTACACTT                                                                <  SRR4302543.4370015/94‑1 (MQ=60)
                              GAAC‑TTTTTGCTTTTCACGCAACTGCACACCATAGTCAGACAGACGCGGTTTACGCGCACCGCGCTGGCCAGGAGCTTGTTCAATTTTACACTT                                                                <  SRR4302543.2357609/94‑1 (MQ=60)
                               AAC‑TTTTTGCTTTTCACGCAACTGCACACCATAGTCAGACAGACGCGGTTTACGCGCACCGCGCTGGCCAGGAGCTTGTTCAATTTTACACTTG                                                               <  SRR4302543.5648867/94‑1 (MQ=60)
                                AC‑TTTTTGCTTTTCACGCAACTGCACACCATAGTCAGACAGACGCGGTTTACGCGCACCGCGCTGGCCAGGAGCTTGTTCAATTTTACACTTGG                                                              <  SRR4302543.6633206/94‑1 (MQ=60)
                                AC‑TTTTTGCTTTTCACGCAACTGCACACCATAGTCAGACAGACGCGGTTTACGCGCACCGCGCTGGCCAGGAGCTTGTTCAATTTTACACTTGG                                                              <  SRR4302543.7841418/94‑1 (MQ=60)
                                AC‑TTTTTGCTTTTCACGCAACTGCACACCATAGTCAGACAGACGCGGTTTACGCGCACCGCGCTGGCCAGGAGCTTGTTCAATTTTACACTTGG                                                              <  SRR4302543.5271069/94‑1 (MQ=60)
                                AC‑TTTTTGCTTTTCACGCAACTGCACACCATAGTCAGACAGACGCGGTTTACGCGCACCGCGCTGGCCAGGAGCTTGTTCAATTTTACACTTGG                                                              <  SRR4302543.980205/94‑1 (MQ=60)
                                AC‑TTTTTGCTTTTCACGCAACTGCACACCATAGTCAGACAGACGCGGTTTACGCGCACCGCGCTGGCCAGGAGCTTGTTCAATTTTACACTTGG                                                              <  SRR4302543.5271068/94‑1 (MQ=60)
                                AC‑TTTTTGCTTTTCACGCAACTGCACACCATAGTCAGACAGACGCGGTTTACGCGCACCGCGCTGGCCAGGAGCTTGTTCAATTTTACACTTGG                                                              >  SRR4302543.2644140/1‑94 (MQ=60)
                                AC‑TTTTTGCTTTTCACGCAACTGCACACCATAGTCAGACAGACGCGGTTTACGCGCACCGCGCTGGCCAGGAGCTTGTTCAATTTTACACTTGG                                                              >  SRR4302543.2419617/1‑94 (MQ=60)
                                AC‑TTTTTGCTTTTCACGCAACTGCACACCATAGCCAGACAGACGCGGTTTACGCGCACCGCGCTGGCCAGGAGCTTGTTCAATTTTACACTTGG                                                              <  SRR4302543.7675725/94‑1 (MQ=60)
                                 C‑TTTTTGCTTTTCACGCAACTGCACACCATAGTCAGACAGACGCGGTTTACGCGCACCGCGCTGGCCAGGAGCTTGTTCAATTTTACACTTGGT                                                             >  SRR4302543.5000578/1‑94 (MQ=60)
                                 C‑TTTTTGCTTTTCACGCAACTGCACACCATAGTCAGACAGACGCGGTTTACGCGCACCGCGCTGGCCAGGAGCTTGTTCAATTTTACACTTGGT                                                             >  SRR4302543.3559084/1‑94 (MQ=60)
                                   TTTTTGCTTTTCACGCAACTGCACACCATAGTCAGACAGACGCGGTTTACGCGCACCGCGCTGGCCAGGAGCTTGTTCAATTTTACACTTGGTA                                                            <  SRR4302543.7831901/94‑1 (MQ=60)
                                    TTTTGCTTTTCACGCAACTGCACACCATAGTCAGACAGACGCGGTTTACGCGCACCGCGCTGGCCAGGAGCTTGTTCAATTTTACACTTGGTAT                                                           <  SRR4302543.6674134/94‑1 (MQ=60)
                                    TTTTGCTTTTCACGCAACTGCACACCATAGTCAGACAGACGCGGTTTACGCGCACCGCGCTGGCCAGGAGCTTGTTCAATTTTACACTTGGTAT                                                           <  SRR4302543.6674135/94‑1 (MQ=60)
                                    TTTTGCTTTTCACGCAACTGCACACCATAGTCAGACAGACGCGGTTTACGCGCACCGCGCTGGCCAGGAGCTTGTTCAATTTTACACTTGGTAT                                                           <  SRR4302543.2111176/94‑1 (MQ=60)
                                     TTTGCTTTTCACGCAACTGCACACCATAGTCAGACAGACGCGGTTTACGCGCACCGCGCTGGCCAGGAGCTTGTTCAATTTTACACTTGGTATC                                                          >  SRR4302543.257975/1‑94 (MQ=60)
                                      TTGCTTTTCACGCAACTGCACACCATAGTCAGACAGACGCGGTTTACGCGCACCGCGCTGGCCAGGAGCTTGTTCAATTTTACACTTGGTATCG                                                         >  SRR4302543.7929145/1‑94 (MQ=60)
                                      TTGCTTTTCACGCAACTGCACACCATAGTCAGACAGACGCGGTTTACGCGCACCGCGCTGGCCAGGAGCTTGTTCAATTTTACACTTGGTATCG                                                         <  SRR4302543.2743069/94‑1 (MQ=60)
                                      TTGCTTTTCACGCAACTGCACACCATAGTCAGACAGACGCGGTTTACGCGCACCGCGCTGGCCAGGAGCTTGTTCAATTTTACACTTGGTATCG                                                         <  SRR4302543.1371597/94‑1 (MQ=60)
                                      TTGCTTTTCACGCAACTGCACACCATAGTCAGACAGACGCGGTTTACGCGCACCGCGCTGGCCAGGAGCTTGTTCAATTTTACACTTGGTATCG                                                         >  SRR4302543.4527309/1‑94 (MQ=60)
                                      TTGCTTTTCACGCAACTGCACACCATAGTCAGACAGACGCGGTTTACGCGCACCGCGCTGGCCAGGAGCTTGTTCAATTTTACACTTGGTATCG                                                         <  SRR4302543.2189210/94‑1 (MQ=60)
                                       TGCTTTTCACGCAACTGCACACCATAGTCAGACAGACGCGGTTTACGCGCACCGCGCTGGCCAGGAGCTTGTTCAATTTTACACTTGGTATCGA                                                        >  SRR4302543.4401404/1‑94 (MQ=60)
                                        GCTTTTCACGCAACTGCACACCATAGTCAGACAGACGCGGTTTACGCGCACCGCGCTGGCCAGGAGCTTGTTCAATTTTACACTTGGTATCGCT                                                       >  SRR4302543.3371352/1‑94 (MQ=60)
                                        GCTTTTCACGCAACTGCACACCATAGTCAGACAGACGCGGTTTACGCGCACCGCGCTGGCCAGGAGCTTGTTCAATTTTACACTTGGTATCGAT                                                       >  SRR4302543.6483095/1‑94 (MQ=60)
                                         CTTTTCACGCAACTGCACACCATAGTCAGACAGACGCGGTTTACGCGCACCGCGCTGGCCAGGAGCTTGTTCAATTTTACACTTGGTATCGATC                                                      <  SRR4302543.7673783/94‑1 (MQ=60)
                                         CTTTTCACGCAACTGCACACCATAGTCAGACAGACGCGGTTTACGCGCACCGCGCTGGCCAGGAGCTTGTTCAATTTTACACTTGGTATCGATC                                                      <  SRR4302543.686738/94‑1 (MQ=60)
                                         CTTTTCACGCAACTGCACACCATAGTCAGACAGACGCGGTTTACGCGCACCGCGCTGGCCAGGAGCTTGTTCAATTTTACACTTGGTATCGATC                                                      <  SRR4302543.7319096/94‑1 (MQ=60)
                                         CTTTTCACGCAACTGCACACCATAGTCAGACAGACGCGGTTTACGCGCACCGCGCTGGCCAGGAGCTTGTTCAATTTTACACTTGGTATCGATC                                                      <  SRR4302543.2277110/94‑1 (MQ=60)
                                          TTTTCACGCAACTGCACACCATAGTCAGACAGACGCGGTTTACGCGCACCGCGCTGGCCAGGAGCTTGTTCAATTTTACACTTGGTATCGATCG                                                     <  SRR4302543.5305094/94‑1 (MQ=60)
                                          TTTTCACGCAACTGCACACCATAGTCAGACAGACGCGGTTTACGCGCACCGCGCTGGCCAGGAGCTTGTTCAATTTTACACTTGGTATCGATCG                                                     <  SRR4302543.3688374/94‑1 (MQ=60)
                                           TTTCACGCAACTGCACACCATAGTCAGACAGACGCGGTTTACGCGCACCGCGCTGGCCAGGAGCTTGTTCAATTTTACACTTGGTATCGATCGC                                                    <  SRR4302543.6368368/94‑1 (MQ=60)
                                            TTCACGCAACTGCACACCATAGTCAGACAGACGCGGTTTACGCGCACCGCGCTGGCCAGGAGCTTGTTCAATTTTACACTTGGTATCGATCGCG                                                   >  SRR4302543.4886714/1‑94 (MQ=60)
                                              CACGCAACTGCACACCATAGTCAGACAGACGCGGTTTACGCGCACCGCGCTGGCCAGGAGCTTGTTCAATTTTACACTTGGTATCGATCGCGCG                                                 >  SRR4302543.3328821/1‑94 (MQ=60)
                                                CGCAACTGCACACCATAGTCAGACAGACGCGGTTTACGCGCACCGCGCTGGCCAGGAGCTTGTTCAATTTTACACTTGGTATCGATCGCGCGAA                                               >  SRR4302543.2692499/1‑94 (MQ=60)
                                                 GCAACTGCACACCATAGTCAGACAGACGCGGTTTACGCGCACCGCGCTGGCCAGGAGCTTGTTCAATTTTACACTTGGTATCGATCGCGCGAAC                                              <  SRR4302543.1393849/94‑1 (MQ=60)
                                                 GCAACTGCACACCATAGTCAGACAGACGCGGTTTACGCGCACCGCGCTGGCCAGGAGCTTGTTCAATTTTACACTTGGTATCGATCGCGCGAAC                                              <  SRR4302543.6354049/94‑1 (MQ=60)
                                                 GCAACTGCACACCATAGTCAGACAGACGCGGTTTACGCGCACCGCGCTGGCCAGGAGCTTGTTCAATTTTACACTTGGTATCGATCGCGCGAAC                                              <  SRR4302543.2070473/94‑1 (MQ=60)
                                                 GCAACTGCACACCATAGTCAGACAGACGCGGTTTACGCGCACCGCGCTGGCCAGGAGCTGGTTCAATTTTACACTTGGTATCGATCGCGCGAAC                                              <  SRR4302543.170022/94‑1 (MQ=60)
                                                   AACTGCACACCATAGTCAGACAGACGCGGTTTACGCGCACCGCGCTGGCCAGGAGCTTGTTCAATTTTACACTTGGTATCGATCGCGCGAACGC                                            >  SRR4302543.7204414/1‑94 (MQ=60)
                                                   AACTGCACACCATAGTCAGACAGACGCGGTTTACGCGCACCGCGCTGGCCAGGAGCTTGTTCAATTTTACACTTGGTATCGATCGCGCGAACGC                                            >  SRR4302543.116072/1‑94 (MQ=60)
                                                   AACTGCACACCATAGTCAGACAGACGCGGTTTACGCGCACCGCGCTGGCCAGGAGCTTGTTCAATTTTACACTTGGTATCGATCGCGCGAACGC                                            >  SRR4302543.3583517/1‑94 (MQ=60)
                                                    ACTGCACACCATAGTCAGACAGACGCGGTTTACGCGCACCGCGCTGGCCAGGAGCTTGTTCAATTTTACACTTGGTATCGATCGCGCGAACGCG                                           >  SRR4302543.5173150/1‑94 (MQ=60)
                                                     CTGCACACCATAGTCAGACAGACGCGGTTTACGCGCACCGCGCTGGCCAGGAGCTTGTTCAATTTTACACTTGGTATCGATCGCGCGAACGCCA                                          >  SRR4302543.3153318/1‑94 (MQ=60)
                                                     CTGCACACCATAGTCAGACAGACGCGGTTTACGCGCACCGCGCTGGCCAGGAGCTTGTTCAATTTTACACTTGGTATCGATCGCGCGAACGCCA                                          >  SRR4302543.3014048/1‑94 (MQ=60)
                                                      TGCACACCATAGTCAGACAGACGCGGTTTACGCGCACCGCGCTGGCCAGGAGCTTGTTCAATTTTACACTTGGTATCGATCGCGCGAACGCCAG                                         <  SRR4302543.7400641/94‑1 (MQ=60)
                                                      TGCACACCATAGTCAGACAGACGCGGTTTACGCGCACCGCGCTGGCCAGGAGCTTGTTCAATTTTACACTTGGTATCGATCGCGCGAACGCCAG                                         <  SRR4302543.1450878/94‑1 (MQ=60)
                                                      TGCACACCATAGTCAGACAGACGCGGTTTACGCGCACCGCGCTGGCCAGGAGCTTGTTCAATTTTACACTTGGTATCGATCGCGCGAACGCCAG                                         <  SRR4302543.803707/94‑1 (MQ=60)
                                                      TGCACACCATAGTCAGACAGACGCGGTTTACGCGCACCGCGCTGGCCAGGAGCTTGTTCAATTTTACACTTGGTATCGATCGCGCGAACGCCAG                                         >  SRR4302543.975166/1‑94 (MQ=60)
                                                      TGCACACCATAGTCAGACAGACGCGGTTTACGCGCACCGCGCTGGCCAGGAGCTTGTTCAATTTTACACTTGGTATCGATCGCGCGAACGCCAG                                         >  SRR4302543.1194837/1‑94 (MQ=60)
                                                      TGCACACCATAGTCAGACAGACGCGGTTTACGCGCACCGCGCTGGCCAGGAGCTTGTTCAATTTTACACTTGGTATCGATCGCGCGAACGCCAG                                         >  SRR4302543.2053868/1‑94 (MQ=60)
                                                      TGCACACCATAGTCAGACAGACGCGGTTTACGCGCACCGCGCTGGCCAGGAGCTTGTTCAATTTTACACTTGGTATCGATCGCGCGAACGCCAG                                         >  SRR4302543.2969545/1‑94 (MQ=60)
                                                       GCACACCATAGTCAGACAGACGCGGTTTACGCGCACCGCGCTGGCCAGGAGCTTGTTCAATTTTACACTTGGTATCGATCGCGCGAACGCCAGA                                        <  SRR4302543.5175257/94‑1 (MQ=60)
                                                         ACACCATAGTCAGACAGACGCGGTTTACGCGCACCGTGCTGGCCAGGAGCTTGTTCAATTTTACACTTGGTATCGATCGCGCGAACGCCAGACT                                      <  SRR4302543.2987078/94‑1 (MQ=60)
                                                         ACACCATAGTCAGACAGACGCGGTTTACGCGCACCGCGCTGGCCAGGAGCTTGTTCAATTGTACACTTGGTATCGATCGCGCGAACGCCAGACT                                      >  SRR4302543.7726055/1‑94 (MQ=60)
                                                          CACCATAGTCAGACAGACGCGGTTTACGCGCACCGCGCTGGCCAGGAGCTTGTTCAATTTTACACTTGGTATCGATCGCGCGAACGCCAGACTT                                     >  SRR4302543.6959294/1‑94 (MQ=60)
                                                            CCATAGTCAGACAGACGCGGTTTACGCGCACCGCGCTGGCCAGGAGCTTGTTCAATTTTACACTTGGTATCGATCGCGCGAACGCCAGACTTAA                                   >  SRR4302543.6552652/1‑94 (MQ=60)
                                                            CCATAGTCAGACAGACGCGGTTTACGCGCACCGCGCTGGCCAGGAGCTTGTTCAATTTTACACTTGGTATCGATCGCGCGAACGCCAGACTTAA                                   >  SRR4302543.2513047/1‑94 (MQ=60)
                                                            CCATAGTCAGACAGACGCGGTTTACGCGCACCGCGCTGGCCAGGAGCTTGTTCAATTTTACACTTGGTATCGATCGCGCGAACGCCAGACTTAA                                   <  SRR4302543.6647619/94‑1 (MQ=60)
                                                             CATAGTCAGACAGACGCGGTTTACGCGCACCGCGCTGGCCAGGAGCTTGTTCAATTTTACACTTGGTATCGATCGCGCGAACGCCAGACTTAAG                                  >  SRR4302543.5337518/1‑94 (MQ=60)
                                                             CATAGTCAGACAGACGCGGTTTACGCGCACCGCGCTGGCCAGGAGCTTGTTCAATTTTACACTTGGTATCGATCGCGCGAACGCCAGACTTAAG                                  <  SRR4302543.2673417/94‑1 (MQ=60)
                                                             CATAGTCAGACAGACGCGGTTTACGCGCACCGCGCTGGCCAGGAGCTTGTTCAATTTTACACTTGGTATCGATCGCGCGAACGCCAGACTGAAG                                  >  SRR4302543.1242572/1‑94 (MQ=60)
                                                              ATAGTCAGACAGACGCGGTTTACGCGCACCGCGCTGGCCAGGAGCTTGTTCAATTTTACACTTGGTATCGATCGCGCGAACGCCAGACTTAAGG                                 >  SRR4302543.5480652/1‑94 (MQ=60)
                                                              ATAGTCAGACAGACGCGGTTTACGCGCACCGCGCTGGCCAGGAGCTTGTTCAATTTTACACTTGGTATCGATCGCGCGAACGCCAGACTTAAGG                                 >  SRR4302543.6311960/1‑94 (MQ=60)
                                                               TAGTCAGACAGACGCGGTTTACGCGCACCGCGCTGGCCAGGAGCTTGTTCAATTTTACACTTGGTATCGATCGCGCGAACGCCAGACTTAAGGA                                <  SRR4302543.3277908/94‑1 (MQ=60)
                                                                AGTCAGACAGACGCGGTTTACGCGCACCGCGCTGGCCAGGAGCTTGTTCAATTTTACACTTGGTATCGATCGCGCGAACGCCAGACTTAAGGAA                               <  SRR4302543.475294/94‑1 (MQ=60)
                                                                 GTCAGACAGACGCGGTTTACGCGCACCGCGCTGGCCAGGAGCTTGTTCAATTTTACACTTGGTATCGATCGCGCGAACGCCAGACTTAAGGAAT                              <  SRR4302543.4488451/94‑1 (MQ=60)
                                                                 GTCAGACAGACGCGGTTTACGCGCACCGCGCTGGCCAGGAGCTTGTTCAATTTTACACTTGGTATCGATCGCGCGAACGCCAGACTTAAGGAAT                              <  SRR4302543.5018475/94‑1 (MQ=60)
                                                                   CAGACAGACGCGGTTTACGCGCACCGCGCTGGCCAGGAGCTTGTTCAATTTTACACTTGGTATCGATCGCGCGAACGCCAGACTTAAGGAATAA                            <  SRR4302543.7988010/94‑1 (MQ=60)
                                                                   CAGACAGACGCGGTTTACGCGCACCGCGCTGGCCAGGAGCTTGTTCAATTTTACACTTGGTATCGATCGCGCGAACGCCAGACTTAAGGAATAA                            >  SRR4302543.4364643/1‑94 (MQ=60)
                                                                   CAGACAGACGCGGTTTACGCGCACCGCGCTGGCCAGGAGCTTGTTCAATTTTACACTTGGTATCGATCGCGCGAACGCCAGACTTAAGGAATAA                            >  SRR4302543.502098/1‑94 (MQ=60)
                                                                    AGACAGACGCGGTTTACGCGCACCGCGCTGGCCAGGAGCTTGTTCAATTTTACACTTGGTATCGATCGCGCGAACGCCAGACTTAAGGAATAAG                           >  SRR4302543.6590171/1‑94 (MQ=60)
                                                                    AGACAGACGCGGTTTACGCGCACCGCGCTGGCCAGGAGCTTGTTCAATTTTACACTTGGTATCGATCGCGCGAACGCCAGACTTAAGGAATAAG                           >  SRR4302543.1302150/1‑94 (MQ=60)
                                                                    AGACAGACGCGGTTTACGCGCACCGCGCTGGCCAGGAGCTTGTTCAATTTTACACTTGGTATCGATCGCGCGAACGCCAGACTTAAGGAATAAG                           >  SRR4302543.2564553/1‑94 (MQ=60)
                                                                    AGACAGACGCGGTTTACGCGCACCGCGCTGGCCAGGAGCTTGTTCAATTTTACACTTGGTATCGATCGCGCGAACGCCAGACATAAGGAATAAG                           >  SRR4302543.7224663/1‑94 (MQ=60)
                                                                     GACAGACGCGGTTTACGCGCACCGCGCTGGCCAGGAGCTTGTTCAATTTTACACTTGGTATCGATCGCGCGAACGCCAGACTTAAGGAATAAGT                          >  SRR4302543.82822/1‑94 (MQ=60)
                                                                     GACAGACGCGGTTTACGCGCACCGCGCTGGCCAGGAGCTTGTTCAATTTTACACTTGGTATCGATCGCGCGAACGCCAGACTTAAGGAATAAGT                          >  SRR4302543.1836809/1‑94 (MQ=60)
                                                                     GACAGACGCGGTTTACGCGCACCGCGCTGGCCAGGAGCTTGTTCAATTTTACACTTGGTATCGATCGCGCGAACGCCAGACTTAAGGAATAAGT                          >  SRR4302543.3374570/1‑94 (MQ=60)
                                                                      ACAGACGCGGTTTACGCGCACCGCGCTGGCCAGGAGCTTGTTCAATTTTACACTTGGTATCGATCGCGCGAACGCCAGACTTAAGGAATAAGTC                         <  SRR4302543.1810856/94‑1 (MQ=60)
                                                                       CAGACGCGGTTTACGCGCACCGCGCTGGCCAGGAGCTTGTTCAATTTTACACTTGGTATCGATCGCGCGAACGCCAGACTTAAGGAATAAGTCG                        <  SRR4302543.1686926/94‑1 (MQ=60)
                                                                       CAGACGCGGTTTACGCGCACCGCGCTGGCCAGGAGCNTGTTCAATTTTNCACTTGGTATCGATCGCGCGANCGCCAGACTTAAGGAATAAGTCG                        >  SRR4302543.3236294/1‑94 (MQ=60)
                                                                        AGACGCGGTTTACGCGCACCGCGCTGGCCAGGAGCTTGTTCAATTTTACACTTGGTATCGATCGCGCGAACGCCAGACTTACAGAATAAGTCGT                       >  SRR4302543.5093744/1‑94 (MQ=60)
                                                                        AGACGCGGTTTACGCGCACCGCGCTGGCCAGGAGCTTGTTCAATTTTACACTTGGTATCGATCGCGCGAACGCCAGACTTAAGGAATAAGTCGG                       <  SRR4302543.600124/94‑1 (MQ=60)
                                                                        AGACGCGGTTTACGCGCACCGCGCTGGCCAGGAGCTTGTTCAATTTTACACTTGGTATCGATCGCGCGAACGCCAGACTTAAGGAATAAGTCGG                       >  SRR4302543.2275903/1‑94 (MQ=60)
                                                                        AGACGCGGTTTACGCGCACCGCGCTGGCCAGGAGCTTGTTCAATTTTACACTTGGTATCGATCGCGCGAACGCCAGACTTAAGGAATAAGTCGG                       >  SRR4302543.5093745/1‑94 (MQ=60)
                                                                        AGACGCGGTTTACGCGCACCGCGCTGGCCAGGAGCTTGTTCAATTTTACACTTGGTATCGATCGCGCGAACGCCAGACTTAAGGAATAAGTCGG                       >  SRR4302543.2120045/1‑94 (MQ=60)
                                                                        AGACGCGGTTTACGCGCACCGCGCTGGCCAGGAGCTTGTTCAATTTTACACTTGGTATCGATCGCGCGAACGCCAGACTTAAGGAATAAGTCGG                       >  SRR4302543.3026777/1‑94 (MQ=60)
                                                                        AGACGCGGTTTACGCGCACCGCGCTGGCCAGGAGCTTGTTCAATTTTACACTTGGTATCGATCGCGCGAACGCCAGACTTAAGGAATAAGTCGG                       <  SRR4302543.7915568/94‑1 (MQ=60)
                                                                        AGACGCGGTTTACGCGCACCGCGCTGGCCAGGAGCTTGTTCAATTTTACACTAGGTATCGATCGCGCGAACGCCAGACCTAAGGAATAAGTCGG                       >  SRR4302543.7101161/1‑94 (MQ=60)
                                                                         GACGCGGTTTACGCGCACCGCGCTGGCCAGGAGCTTGTTCAATTTTACACTTGGTATCGATCGCGCGAACGCCAGACTTAAGGAATAAGTCGGT                      <  SRR4302543.7051956/94‑1 (MQ=60)
                                                                          ACGCGGTTTACGCGCACCGCGCTGGCCAGGAGCTTGTTCAATTTTACACTTGGTATCGATCGCGCGAACGCCAGACTTAAGGAATAAGTCGGTG                     <  SRR4302543.2901660/94‑1 (MQ=60)
                                                                            GCGGTTTACGCGCACCGCGCTGGCCAGGAGCTTGTTCAATTTTACACTTGGTATCGATCGCGCGAACGCCAGACTTAAGGAATAAGTCGGTGCC                   >  SRR4302543.1024859/1‑94 (MQ=60)
                                                                            GCGGTTTACGCGCACCGCGCTGGCCAGGAGCTTGTTCAATTTTACACTTGGTATCGAGGGCACGAAGGCACCACTTAAGGAATCAGTCGGTGCC                   >  SRR4302543.2668183/1‑94 (MQ=60)
                                                                             CGGTTTACGCGCACCGCGCTGGCCAGGAGCTTGTTCAATTTTACACTTGGTATCGATCGCGCGAACGCCAGACTTAAGGAATAAGTCGGTGCCC                  <  SRR4302543.4017918/94‑1 (MQ=60)
                                                                              GGTTTACGCGCACCGCGCTGGCCAGGAGCTTGTTCAATTTTACACTTGGTATCGATCGCGCGAACGCCAGACTTAAGGAATAAGTCGGTGCCCT                 >  SRR4302543.1128909/1‑94 (MQ=60)
                                                                               GTTTACGCGCACCGCGCTGGCCAGGAGCTTGTTCAATTTTACACTTGGTATCGATCGCGCGAACGCCAGACTTAAGGAATAAGTCGGTGCCCTC                >  SRR4302543.2514349/1‑94 (MQ=60)
                                                                               GTTTACGCGCACCGCGCTGGCCAGGAGCTTGTTCAATTTTACACTTGGTATCGATCGCGCGAACGCCAGACTTAAGGAATAAGTCGGTGCCCTC                >  SRR4302543.3730984/1‑94 (MQ=60)
                                                                               GTTTACGCGCACCGCGCTGGCCAGGAGCTTGTTCAATTTTACACTTGGTATCGATCGCGCGAACGCCAGACTTAAGGAATAAGTCGGTGCCCTC                >  SRR4302543.4339552/1‑94 (MQ=60)
                                                                               GTTTACGCGCACCGCGCTGGCCAGGAGCTTGTTCAATTTTACACTTGGTATCGATCGCGCGAACGCCAGACTTAAGGAATAAGTCGGTGCCCTC                >  SRR4302543.7669910/1‑94 (MQ=60)
                                                                                TTTACGCGCACCGCGCTGGCCAGGAGCTTGTTCAATTTTACACTTGGTATCGATCGCGCGAACGCCAGACTTAAGGAATAAGTCGGTGCCCTCA               <  SRR4302543.161365/94‑1 (MQ=60)
                                                                                TTTACGCGCACCGCGCTGGCCAGGAGCTTGTTCAATTTTACACTTGGTATCGATCGCGCGAACGCCAGACTTAAGGAATAAGTCGGTGCCCTCA               <  SRR4302543.4635781/94‑1 (MQ=60)
                                                                                TTTACGCGCACCGCGCTGGCCAGGAGCTTGTTCAATTTTACACTTGGTATCGATCGCGCGAACGCCAGACTTAAGGAATAAGTCGGTGCCCTCA               >  SRR4302543.6041379/1‑94 (MQ=60)
                                                                                 TTACGCGCACCGCGCTGGCCAGGAGCTTGTTCAATTTTACACTTGGTATCGATCGCGCGAACGCCAGACTTAAGGAATAAGTCGGTGCCCTCAC              <  SRR4302543.6253034/94‑1 (MQ=60)
                                                                                 TTACGCGCACCGCGCTGGCCAGGAGCTTGTTCAATTTTACACTTGGTATCGATCGCGCGAACGCCAGACTTAAGGAATAAGTCGGTGCCCTCAC              <  SRR4302543.6253035/94‑1 (MQ=60)
                                                                                  TACGCGCACCGCGCTGGCCAGGAGCTTGTTCAATTTTACACTTGGTATCGATCGCGCGAACGCCAGACTTAAGGAATAAGTCGGTGCCCTCACG             >  SRR4302543.3045910/1‑94 (MQ=60)
                                                                                  TACGCGCACCGCGCTGGCCAGGAGCTTGTTCAATTTTACACTTGGTATCGATCGCGCGAACGCCAGACTTAAGGAATAAGTCGGTGCCCTCACG             <  SRR4302543.7116395/94‑1 (MQ=60)
                                                                                  TACGCGCACCGCGCTGGCCAGGAGCTTGTTCAATTTTACACTTGGTATCGATCGCGCGAACGCCAGACTTAAGGAATAAGTCGGTGCCCTCACG             >  SRR4302543.4159859/1‑94 (MQ=60)
                                                                                  TACGCGCACCGCGCTGGCCAGGAGCTTGTTCAATTTTACACTTGGTATCGATCGCGCGAACGCCAGACTTAAGGAATAAGTCGGTGCCCTCACG             >  SRR4302543.7315836/1‑94 (MQ=60)
                                                                                  TACGCGCACCGCGCTGGCCAGGAGCTTGTTCAATTTTACACTTGGTATCGATCGCGCGAACGCCAGACTTAAGGAATAAGTCGGTGCCCTCACG             <  SRR4302543.5754578/94‑1 (MQ=60)
                                                                                    CGCGCACCGCGCTGGCCAGGAGCTTGTTCAATTTTACACTTGGTATCGATCGCGCGAACGCCAGACTTAAGGAATAAGTCGGTGCCCTCACGAC           <  SRR4302543.1497607/94‑1 (MQ=60)
                                                                                    CGCGCACCGCGCTGGCCAGGAGCTTGTTCAATTTTACACTTGGTATCGATCGCGCGAACGCCAGACTTAAGGAATAAGTCGGTGCCCTCACGAC           <  SRR4302543.230025/94‑1 (MQ=60)
                                                                                    CGCGCACCGCGCTGGCCAGGAGCTTGTTCAATTTTACACTTGGTATCGATCGCGCGAACGCCAGACTTAAGGAATAAGTCGGTGCCCTCACGAC           <  SRR4302543.4083672/94‑1 (MQ=60)
                                                                                    CGCGCACCGCGCTGGCCAGGAGCTTGTTCAATTTTACACTTGGTATCGATCGCGCGAACGCCAGACTTAAGGAATAAGTCGGTGCCCTCACGAC           <  SRR4302543.2130841/94‑1 (MQ=60)
                                                                                    CGCGCACCGCGCTGGCCAGGAGCTTGTTCAATTTTACACTTGGTATCGATCGCGCGAACGCCAGACTTAAGGAATAAGTCGGTGCCCTCACGAC           >  SRR4302543.1224076/1‑94 (MQ=60)
                                                                                     GCGCACCGCGCTGGCCAGGAGCTTGTTCAATTTTACACTTGGTATCGATCGCGCGAACGCCAGACTTAAGGAATAAGTCGGTGCCCTCACGACG          <  SRR4302543.7424056/94‑1 (MQ=60)
                                                                                     GCGCACCGCGCTGGCCAGGAGCTTGTTCAATTTTACACTTGGTATCGATCGCGCGAACGCCAGACTTAAGGAATAAGTCGGTGCCCTCACGACG          <  SRR4302543.6728313/94‑1 (MQ=60)
                                                                                     GCGCACCGCGCTGGCCAGGAGCTTGTTCAATTTTACACTTGGTATCGATCGCGCGAACGCCAGACTTAAGGAATAAGTCGGTGCCCTCACGACG          <  SRR4302543.5750809/94‑1 (MQ=60)
                                                                                      CGCACCGCGCTGGCCAGGAGCTTGTTCAATTTTACACTTGGTATCGATCGCGCGAACGCCAGACTTAAGGAATAAGTCGGTGCCCTCACGACGG         <  SRR4302543.4814216/94‑1 (MQ=60)
                                                                                      CGCACCGCGCTGGCCAGGAGCTTGTTCAATTTTACACTTGGTATCGATCGCGCGAACGCCAGACTTAAGGAATAAGTCGGTGCCCTCACGACGG         >  SRR4302543.1127699/1‑94 (MQ=60)
                                                                                      CGCACCGCGCTGGCCAGGAGCTTGTTCAATTTTACACTTGGTATCGATCGCGCGAACGCCAGACTTAAGGAATAAGTCGGTGCCCTCACGACGG         >  SRR4302543.6448191/1‑94 (MQ=60)
                                                                                       GCACCGCGCTGGCCAGGAGCTTGTTCAATTTTACACTTGGTATCGATCGCGCGAACGCCAGACTTAAGGAATAAGTCGGTGCCCTCACGACGGC        <  SRR4302543.5314558/94‑1 (MQ=60)
                                                                                          CCGCGCTGGCCAGGAGCTTGTTCAATTTTACACTTGGTATCGATCGCGCGAACGCCAGACTTAAGGAATAAGTCGGTGCCCTCACGACGGCTCA     <  SRR4302543.7897248/94‑1 (MQ=60)
                                                                                           CGCGCTGGCCAGGAGCTTGTTCAATTTTACACTTGGTATCGATCGCGCGAACGCCAGACTTAAGGAATAAGTCGGTGCCCTCACGACGGCTCAG    >  SRR4302543.3254365/1‑94 (MQ=60)
                                                                                           CGCGCTGGCCAGGAGCTTGTTCAATTTTACACTTGGTATCGATCGCGCGAACGCCAGACTTAAGGAATAAGTCGGTGCCCTCACGACGGCTCAG    <  SRR4302543.4367775/94‑1 (MQ=60)
                                                                                           CGCGCTGGCCAGGAGCTTGTTCAATTTTACACTTGGTATCGATCGCGCGAACGCCAGACTTAAGGAATAAGTCGGTGCCCTCACGACGGCTCAG    <  SRR4302543.751436/94‑1 (MQ=60)
                                                                                             CGCTGGCCAGGAGCTTGTTCAATTTTACACTTGGTATCGATCGCGCGAACGCCAGACTTAAGGAATAAGTCGGTGCCCTCACGACGGCTCAGCT  <  SRR4302543.2330249/94‑1 (MQ=60)
                                                                                             CGCTGGCCAGGAGCTTGTTCAATTTTACACTTGGTATCGATCGCGCGAACGCCAGACTTAAGGAATAAGTCGGTGCCCTCACGACGGCTCAGCT  <  SRR4302543.3353175/94‑1 (MQ=60)
                                                                                             CGCTGGCCAGGAGCTTGTTCAATTTTACACTTGGTATCGATCGCGCGAACGCCAGACTTAAGGAATAAGTCGGTGCCCTCACGACGGCTCAGCT  >  SRR4302543.2382587/1‑94 (MQ=60)
                                                                                             |                                                                                             
ACTGACGCTCCAGCACACCATAGATACGGCGAAC‑TTTTTGCTTTTCACGCAACTGCACACCATAGTCAGACAGACGCGGTTTACGCGCACCGTGCTGGCCAGGAGCTTGTTCAATTTTACACTTGGTATCGATCGCGCGAACGCCAGACTTAAGGAATAAGTCGGTGCCCTCACGACGGCTCAGCT  >  NC_000913/3439099‑3439284

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑