Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A1 F1 I1 R1 1696 279.3 15874187 97.8% 15524954 93.0

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 3,525,330 T→C T408T (ACT→ACC)  yrfF → putative dehydrogenase

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009133,525,3300TC99.2% 1128.4 / ‑2.2 365T408T (ACT→ACC) yrfFputative dehydrogenase
Reads supporting (aligned to +/- strand):  ref base T (2/1);  new base C (168/194);  total (170/195)
Fisher's exact test for biased strand distribution p-value = 6.00e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.30e-01

Only 100 of 378 total aligned reads displayed.

AGCCACCAGCGTAAAACAACTGGCTGACGCTGGCGTGCGGGTAGGCGATACATTGCGTATTAGCGGTACGGGAATGTGTAATATTCGAACTTCCGGAACCTGGAGCGCGAAAACCAATTCACCTTTTTTACCGTTTGACTGCTCGCAGATCATCTGGAACGACGCCCGCTCATTGCCATT  >  NC_000913/3525240‑3525419
                                                                                          |                                                                                         
aGCCACCAGCTTAAAACAACTGGCTGACGCTGGCGTGCGGGTAGGCGATACATTGCGTATTAGCGGTACGGGAATGTGTAATATTCGAACCTc                                                                                         <  1:4231571/93‑1 (MQ=255)
 gCCACCAGCGTAAAACAACTGGCTGACGCTGGCGTGCGGGTAGGCGATACATTGCGTATTAGCGGTACGGGAATGTGTAATATTCGAACCTcc                                                                                        >  1:1892168/1‑93 (MQ=255)
  ccaccaGCGTAAAACAACTGGCTGACGCTGGCGTGCGGGTAGGCGATACATTGCGTATTAGCGGTACGGGAATGTGTAATATTCGAACCTCCg                                                                                       >  1:4859713/1‑93 (MQ=255)
   caccaGCGTAAAACAACTGGCTGACGCTGGCGTGCGGGTAGGCGATACATTGCGTATTAGCGGTACGGGAATGTGTAATATTCGAACCTCCgg                                                                                      >  2:5164880/1‑93 (MQ=255)
    accaGCGTAAAACAACTGGCTGACGCTGGCGTGCGGGTAGGCGATACATTGCGTATTAGCGGTACGGGAATGTGTAATATTCGAACCTCCGGa                                                                                     >  2:1567972/1‑93 (MQ=255)
     ccaGCGTAAAACAACTGGCTGACGCTGGCGTGCGGGTAGGCGATACATTGCGTATTAGCGGTACGGGAATGTGTAATATTCGAACCTCCGGaa                                                                                    <  1:1096867/93‑1 (MQ=255)
     ccaGCGTAAAACAACTGGCTGACGCTGGCGTGCGGGTAGGCGATACATTGCGTATTAGCGGTACGGGAATGTGTAATATTCGAACCTCCGGaa                                                                                    >  1:2806947/1‑93 (MQ=255)
     ccaGCGTAAAACAACTGGCTGACGCTGGCGTGCGGGTAGGCGATACATTGCGTATTAGCGGTACGGGAATGTGTAATATTCGAACCTCCGGaa                                                                                    >  1:2528447/1‑93 (MQ=255)
      caGCGTAAAACAACTGGCTGACGCTGGCGTGCGGGTAGGCGATACATTGCGTATTAGCGGTACGGGAATGTGTAATATTCGAACCTCCGGAAc                                                                                   >  2:2137706/1‑93 (MQ=255)
        gCGTAAAACAACTGGCTGACGCTGGCGTGCGGGTAGGCGATACATTGCGTATTAGCGGTACGGGAATGTGTAATATTCGAACCTCCGGAACCt                                                                                 <  1:6266449/93‑1 (MQ=255)
         cGTAAAACAACTGGCTGACGCTGGCGTGCGGGTAGGCGATACATTGCGTATTAGCGGTACGGGAATGTGTAATATTCGAACCTCCGGAACCTg                                                                                <  2:6123167/93‑1 (MQ=255)
           tAAAACAACTGGCTGACGCTGGCGTGCGGGTAGGCGATACATTGCGTATTAGCGGTACGGGAATGTGTAATATTCGAACCTCCGGAACCTGGa                                                                              >  2:4575150/1‑93 (MQ=255)
           tAAAACAACTGGCTGACGCTGGCGTGCGGGTAGGCGATACATTGCGTATTAGCGGTACGGGAATGTGTAATATTCGAACCTCCGGAACCTGGa                                                                              <  1:928646/93‑1 (MQ=255)
             aaaCAACTGGCTGACGCTGGCGTGCGGGTAGGCGATACATTGCGTATTAGCGGTACGGGAATGTGTAATATTCGAACCTCCGGAACCTGGAgc                                                                            <  1:7839487/93‑1 (MQ=255)
             aaaCAACTGGCTGACGCTGGCGTGCGGGTAGGCGATACATTGCGTATTAGCGGTACGGGAATGTGTAATATTCGAACCTCCGGAACCTGGAgc                                                                            <  1:3338362/93‑1 (MQ=255)
             aaaCAACTGGCTGACGCTGGCGTGCGGGTAGGCGATACATTGCGTATTAGCGGTACGGGAATGTGTAATATTCGAACCTCCGGAACCTGGAgc                                                                            <  2:4447684/93‑1 (MQ=255)
             aaaCAACTGGCTGACGCTGGCGTGCGGGTAGGCGATACATTGCGTATTAGCGGTACGGGAATGTGTAATATTCGAACCTCCGGAACCTGGAgc                                                                            >  2:350812/1‑93 (MQ=255)
             aaaCAACTGGCTGACGCTGGCGTGCGGGTAGGCGATACATTGCGTATTAGCGGTACGGGAATGTGTAATATTCGAACCTCCGGAACCTGGAgc                                                                            <  2:2578967/93‑1 (MQ=255)
              aacaacTGGCTGACGCTGGCGTGCGGGTAGGCGATACATTGCGTATTAGCGGTACGGGAATGTGTAATATTCGAACCTCCGGAACCTGGAgcg                                                                           >  1:4726534/1‑93 (MQ=255)
               acaacTGGCTGACGCTGGCGTGCGGGTAGGCGATACATTGCGTATTAGCGGTACGGGAATGTGTAATATTCGAACCTCCGGAACCTGGAgcgc                                                                          >  1:3001378/1‑93 (MQ=255)
               acaacTGGCTGACGCTGGCGTGCGGGTAGGCGATACATTGCGTATTAGCGGTACGGGAATGTGTAATATTCGAACCTCCGGAACCTGGAgcgc                                                                          >  1:168934/1‑93 (MQ=255)
                caacTGGCTGACGCTGGCGTGCGGGTAGGCGATACATTGCGTATTAGCGGTACGGGAATGTGTAATATTCGAACCTCCGGAACCTGGAGcgcg                                                                         >  2:2342650/1‑93 (MQ=255)
                 aacTGGCTGACGCTGGCGTGCGGGTAGGCGATACATTGCGTATTAGCGGTACGGGAATGTGTAATATTCGAACCTCCGGAACCTGGAGCGCGa                                                                        <  1:3904960/93‑1 (MQ=255)
                  acTGGCTGACGCTGGCGTGCGGGTAGGCGATACATTGCGTATTAGCGGTACGGGAATGTGTAATATTCGAACCTCCGGAACCTGGAGCGCGaa                                                                       <  1:1463234/93‑1 (MQ=255)
                  acTGGCTGACGCTGGCGTGCGGGTAGGCGATACATTGCGTATTAGCGGTACGGGAATGTGTAATATTCGAACCTCCGGAACCTGGAGCGCGaa                                                                       >  2:3060113/1‑93 (MQ=255)
                   cTGGCTGACGCTGGCGTGCGGGTAGGCGATACATTGCGTATTAGCGGTACGGGAATGTGTAATATTCGAACCTCCGGAACCTGGAGCGCGaaa                                                                      <  1:979979/93‑1 (MQ=255)
                      gCTGACGCTGGCGTGCGGGTAGGCGATACATTGCGTATTAGCGGTACGGGAATGTGTAATATTCGAACCTCCGGAACCTGGAGCGCGAAAAcc                                                                   <  1:3124936/93‑1 (MQ=255)
                      gCTGACGCTGGCGTGCGGGTAGGCGATACATTGCGTATTAGCGGTACGGGAATGTGTAATATTCGAACCTCCGGAACCTGGAGCGCGAAAAcc                                                                   <  2:2513272/93‑1 (MQ=255)
                      gCTGACGCTGGCGTGCGGGTAGGCGATACATTGCGTATTAGCGGTACGGGAATGTGTAATATTCGAACCTCCGGAACCTGGAGCGCGAAAAcc                                                                   <  2:5224202/93‑1 (MQ=255)
                       cTGACGCTGGCGTGCGGGTAGGCGATACATTGCGTATTAGCGGTACGGGAATGTGTAATATTCGAACCTCCGGAACCTGGAGCGCGAAAACCa                                                                  <  2:556509/93‑1 (MQ=255)
                        tGACGCTGGCGTGCGGGTAGGCGATACATTGCGTATTAGCGGTACGGGAATGTGTAATATTCGAACCTCCGGAACCTGGAGCGCGAAAACCaa                                                                 >  1:3519857/1‑93 (MQ=255)
                           cGCTGGCGTGCGGGTAGGCGATACATTGCGTATTAGCGGTACGGGAATGTGTAATATTCGAACCTCCGGAACCTGGAGCGCGAAAACCAATTc                                                              >  1:6503825/1‑93 (MQ=255)
                            gCTGGCGTGCGGGTAGGCGATACATTGCGTATTAGCGGTACGGGAATGTGTAATATTCGAACCTCCGGAACCTGGAGCGCGAAAACCAAttaa                                                             >  2:479590/1‑91 (MQ=255)
                            gCTGGCGTGCGGGTAGGCGATACATTGCGTATTAGCGGTACGGGAATGTGTAATATTCGAACCTCCGGAACCTGGAGCGCGAAAACCAATTCa                                                             <  2:7217862/93‑1 (MQ=255)
                              tGGCGTGCGGGTAGGCGATACATTGCGTATTAGCGGTACGGGAATGTGTAATATTCGAACCTCCGGAACCTGGAGCGCGAAAACCAATTCAcc                                                           >  2:3670822/1‑93 (MQ=255)
                                gCGTGCGGGTAGGCGATACATTGCGTATTAGCGGTACGGGAATGTGTAATATTCGAACCTCCGGAACCTGGAGCGCGAAAACCAATTCACCtt                                                         <  2:5816718/93‑1 (MQ=255)
                                   tGCGGGTAGGCGATACATTGCGTATTAGCGGTACGGGAATGTGTAATATTCGAACCTCCGGAACCTGGAGCGCGAAAACCAATTCACCttttt                                                      <  2:6275361/93‑1 (MQ=255)
                                     cGGGTAGGCGATACATTGCGTATTAGCGGTACGGGAATGTGTAATATTCGAACCTCCGGAACCTGGAGCGCGAAAACCAATTCACCTTTTTTa                                                    >  2:5070265/1‑93 (MQ=255)
                                      gggTAGGCGATACATTGCGTATTAGCGGTACGGGAATGTGTAATATTCGAACCTCCGGAACCTGGAGCGCGAAAACCAATTCACCTTTTTTAc                                                   <  1:4548531/93‑1 (MQ=255)
                                      gggTAGGCGATACATTGCGTATTAGCGGTACGGGAATGTGTAATATTCGAACCTCCGGAACCTGGAGCGCGAAAACCAATTCACCTTTTTTAc                                                   >  2:5397641/1‑93 (MQ=255)
                                      gggTAGGCGATACATTGCGTATTAGCGGTACGGGAATGTGTAATATTCGAACCTCCGGAACCTGGAGCGCGAAAACCAATTCACCTTTTTTAc                                                   >  1:1248264/1‑93 (MQ=255)
                                      gggTAGGCGATACATTGCGTATTAGCGGTACGGGAATGTGTAATATTCGAACCTCCGGAACCTGGAGCGCGAAAACCAATTCACCTTTTTTAc                                                   <  2:1965102/93‑1 (MQ=255)
                                      gggTAGGCGATACATTGCGTATTAGCGGTACGGGAATGTGCAATCTTCGAACCTCCGGGACCTGGAGCGCGAAAACCAATTCACCTTTTTTAc                                                   >  2:6531047/1‑93 (MQ=255)
                                        gTAGGCGATACATTGCGTATTAGCGGTACGGGAATGTGTAATATTCGAACCTCCGGAACCTGGAGCGCGAAAACCAATTCACCTTTTTTCCCg                                                 <  2:2442883/93‑1 (MQ=255)
                                        gTAGGCGATACATTGCGTATTAGCGGTACGGGAATGTGTAATATTCGAACCTCCGGAACCTGGAGCGCGAAAACCAATTCACCTTTTTTACCg                                                 >  2:4107235/1‑93 (MQ=255)
                                         tAGTCGATACATTGCGTATTAGCGGTACGGGAATGTGTAATATTCGAACCTCCGGAACCTGGAGCGCGAAAACCAATTCACCTTTTTTACCGt                                                <  2:7294875/93‑1 (MQ=255)
                                         tAGGCGATACATTGCGTATTAGCGGTACGGGAATGTGTAATATTCGAACCTCCGGAACCTGGAGCGCGAAAACCAATTCACCTTTTTTACCGt                                                >  1:3667387/1‑93 (MQ=255)
                                          aGGCGATACATTGCGTATTAGCGGTACGGGAATGTGTAATATTCGAACCTCCGGAACCTGGAGCGCGAAAACCAATTCACCTTTTTTACCGtt                                               >  2:6886659/1‑93 (MQ=255)
                                           ggCGATACATTGCGTATTAGCGGTACGGGAATGTGTAATATTCGAACCTCCGGAACCTGGAGCGCGAAAACCAATTCACCTTTTTTACCGttt                                              <  2:4283007/93‑1 (MQ=255)
                                           ggCGATACATTGCGTATTAGCGGTACGGGAATGTGTAATATTCGAACCTCCGGAACCTGGAGCGCGAAAACCAATTCACCTTTTTTACCGttt                                              <  1:6885700/93‑1 (MQ=255)
                                           ggCGATACATTGCGTATTAGCGGTACGGGAATGTGTAATATTCGAACCTCCGGAACCTGGAGCGCGAAAACCAATTCACCTTTTTTACCGttt                                              <  1:7536132/93‑1 (MQ=255)
                                           ggCGATACATTGCGTATTAGCGGTACGGGAATGTGTAATATTCGAACCTCCGGAACCTGGAGCGCGAAAACCAATTCACCTTTTTTACCGttt                                              <  1:7283541/93‑1 (MQ=255)
                                            gCGATACATTGCGTATTAGCGGTACGGGAATGTGTAATATTCGAACCTCCGGAACCTGGAGCGCGAAAACCAATTCACCTTTTTTACCGTTTg                                             <  1:5485059/93‑1 (MQ=255)
                                              gATACATTGCGTATTAGCGGTACGGGAATGTGTAATATTCGAACCTCCGGAACCTGGAGCGCGAAAACCAATTCACCTTTTTTACCGTTTGAc                                           <  2:4364522/93‑1 (MQ=255)
                                               aTACATTGCGTATTAGCGGTACGGGAATGTGTAATATTCGAACCTCCGGAACCTGGAGCGCGAAAACCAATTCACCTTTTTTACCGTTTGACt                                          >  1:818204/1‑93 (MQ=255)
                                                tACATTGCGTATTAGCGGTACGGGAATGTGTAATATTCGAACCTCCGGAACCTGGAGCGCGAAAACCAATTCACCTTTTTTACCGTTTGACTg                                         >  2:5467100/1‑93 (MQ=255)
                                                 aCATTGCGTATTAGCGGTACGGGAATGTGTAATATTCGAACCTCCGGAACCTGGAGCGCGAAAACCAATTCACCTTTTTTACCGTTTGACTGc                                        <  1:2619644/93‑1 (MQ=255)
                                                 aCATTGCGTATTAGCGATACGGGAATGTGTAATATTCGAACCTCCGGAACCTGGAGCGCGAAAACCAATTCACCTTTTTTACCGTTTGACTGc                                        <  1:7033710/93‑1 (MQ=255)
                                                   aTTGCGTATTAGCGGTACGGGAATGTGTAATATTCGAACCTCCGGAACCTGGAGCGCGAAAACCAATTCACCTTTTTTACCGTTTGACTGCTc                                      <  2:1839593/93‑1 (MQ=255)
                                                    ttGCGTATTAGCGGTACGGGAATGTGTAATATTCGAACCTCCGGAACCTGGAGCGCGAAAACCAATTCACCTTTTTTACGGTTTGACTGCTCg                                     >  1:6384959/1‑93 (MQ=255)
                                                    ttGCGTATTAGCGGTACGGGAATGTGTAATATTCGAACCTCCGGAACCTGGAGCGCGAAAACCAATTCACCTTTTTTACCGTTTGACTGCTCg                                     >  2:3839931/1‑93 (MQ=255)
                                                    ttGCGTATTAGCGGTACGGGAATGTGTAATATTCGAACCTCCGGAACCTGGAGCGCGAAAACCAATTCACCTTTTTTACCGTTTGACTGCTCg                                     >  2:228685/1‑93 (MQ=255)
                                                        gTATTAGCGGTACGGGAATGTGTAATATTCGAACCTCCGGAACCTGGAGCGCGAAAACCAATTCACCTTTTTTACCGTTTGACTGCTCGCAGa                                 >  1:5616909/1‑93 (MQ=255)
                                                        gTATTAGCGGTACGGGAATGTGTAATATTCGAACCTCCGGAACCTGGAGCGCGAAAACCAATTCACCTTTTTTACCGTTTGACTGCTCGCAGa                                 <  1:5316862/93‑1 (MQ=255)
                                                        gTATTAGCGGTACGGGAATGTGTAATATTCGAACCTCCGGAACCTGGAGCGCGAAAACCAATTCACCTTTTTTACCGTTTGACTGCTCGCAGa                                 >  2:1283880/1‑93 (MQ=255)
                                                         tATTAGCGGTACGGGAATGTGTAATATTCGAACCTCCGGAACCTGGAGCGCGAAAACCAATTCACCTTTTTTACCGTTTGACTGCTCGCAGat                                >  1:1032304/1‑93 (MQ=255)
                                                           ttAGCGGTACGGGAATGTGTAATATTCGAACCTCCGGAACCTGGAGCGCGAAAACCAATTCACCTTTTTTACCGTTTGACTGCTCGCAGatca                              <  1:6654525/93‑1 (MQ=255)
                                                           ttAGCGGTACGGGAATGTGTAATATTCGAACCTCCGGAACCTGGAGCGCGAAAACCAATTCACCTTTTTTACCGTTTGACTGCTCGCAGatca                              >  2:3534235/1‑93 (MQ=255)
                                                              gCGGTACGGGAATGTGTAATATTCGAACCTCCGGAACCTGGAGCGCGAAAACCAATTCACCTTTTTTACCGTTTGACTGCTCGCAGATCATCt                           <  2:7545774/93‑1 (MQ=255)
                                                               cGGTACGGGAATGTGTAATATTCGAACCTCCGGAACCTGGAGCGCGAAAACCAATTCACCTTTTTTACCGTTTGACTGCTCGCAGATCATCTg                          >  1:2231935/1‑93 (MQ=255)
                                                               cGGTACGGGAATGTGTAATATTCGAACCTCCGGAACCTGGAGCGCGAAAACCAATTCACCTTTTTTACCGTTTGACTGCTCGCAGATCATCTg                          <  2:584613/93‑1 (MQ=255)
                                                                 gTACGGGAATGTGTAATATTCGAACCTCCGGAACCTGGAGCGCGAAAACCAATTCACCTTTTTTACCGTTTGACTGCTCGCAGATCATCTGGa                        <  2:5975000/93‑1 (MQ=255)
                                                                 gTACGGGAATGTGTAATATTCGAACCTCCGGAACCTGGAGCGCGAAAACCAATTCACCTTTTTTACCGTTTGACTGCTCGCAGATCATCTGGa                        >  1:3242922/1‑93 (MQ=255)
                                                                 gTACGGGAATGTGTAATATTCGAACCTCCGGAACCTGGAGCGCGAAAACCAATTCACCTTTTTTACCGTTTGACTGCTCGCAGATCATCTGGa                        >  2:167499/1‑93 (MQ=255)
                                                                  tACGGGAATGTGTAATATTCGAACCTCCGGAACCTGGAGCGCGAAAACCAATTCACCTTTTTTACCGTTTGACTGCTCGCAGATCATCTGGaa                       >  2:26508/1‑93 (MQ=255)
                                                                  tACGGGAATGTGTAATATTCGAACCTCCGGAACCTGGAGCGCGAAAACCAATTCACCTTTTTTACCGTTTGACTGCTCGCAGATCATCTGGaa                       <  1:3292768/93‑1 (MQ=255)
                                                                  tACGGGAATGTGTAATATTCGAACCTCCGGAACCTGGAGCGCGAAAACCAATTCACCTTTTTTACCGTTTGACTGCTCGCAGATCATCTGGaa                       >  1:7450380/1‑93 (MQ=255)
                                                                   aCGGGAATGTGTAATATTCGAACCTCCGGAACCTGGAGCGCGAAAACCAATTCACCTTTTTTACCGTTTGACTGCTCGCAGATCATCTGGAac                      <  2:4892537/93‑1 (MQ=255)
                                                                     gggAATGTGTAATATTCGAGCTTCCGGAACCTGGAGCGCGAAAACCAATTCACCTTTTTTACCGTTTGACTGCTCGCAGATCATCTGGAacga                    <  1:5222068/93‑1 (MQ=255)
                                                                     gggAATGTGTAATATTCGAACCTCCGGAACCTGGAGCGCGAAAACCAATTCACCTTTTTTACCGTTTGACTGCTCGCAGATCATCTGGAacga                    >  2:2774533/1‑93 (MQ=255)
                                                                      ggAATGTGTAATATTCGAACCTCCGGAACCTGGAGCGCGAAAACCAATTCACCTTTTTTACCGTTTGACTGCTCGCAGATCATCTGGAacgcc                   >  2:6798313/1‑91 (MQ=255)
                                                                      ggAATGTGTAATATTCGAACCTCCGGAACCTGGAGCGCGAAAACCAATTCACCTTTTTTACCGTTTGACTGCTCGCAGATCATCTGGAacgac                   >  2:7403142/1‑93 (MQ=255)
                                                                       gAATGTGTAATATTCGAACCTCCGGAACCTGGAGCGCGAAAACCAATTCACCTTTTTTACCGTTTGACTGCTCGCAGATCATCTGGAacgacg                  >  1:4076464/1‑93 (MQ=255)
                                                                         aTGTGTAATATTCGAACCTCCGGAACCTGGAGCGCGAAAACCAATTCACCTTTTTTACCGTTTGACTGCTCGCAGATCATCTGGAACGACGcc                <  1:5544625/93‑1 (MQ=255)
                                                                          tgtgTAATATTCGAACCTCCGGAACCTGGAGCGCGAAAACCAATTCACCTTTTTTACCGTTTGACTGCTCGCAGATCATCTGGAACGACGccc               >  1:3811445/1‑93 (MQ=255)
                                                                          tgtgTAATATTCGAACCTCCGGAACCTGGAGCGCGAAAACCAATTCACCTTTTTTACCGTTTGACTGCTCGCAGATCATCTGGAACGACGccc               <  2:3351729/93‑1 (MQ=255)
                                                                          tgtgTAATATTCGAACCTCCGGAACCTGGAGCGCGAAAACCAATTCACCTTTTTTACCGTTTGACTGCTCGCAGATCATCTGGAACGACGccc               >  2:7763536/1‑93 (MQ=255)
                                                                          tgtgTAATATTCGAACCTCCGGAACCTGGAGCGCGAAAACCAATTCACCTTTTTTACCGTTTGACTGCTCGCAGATCATCTGGAACGACGccc               <  2:7165618/93‑1 (MQ=255)
                                                                          tgtgTAATATTCGAACCTCCGGAACCTGGAGCGCGAAAACCAATTCACCTTTTTTACCGTTTGACTGCTCGCAGATCATCTGGAACGACGccc               <  1:6817277/93‑1 (MQ=255)
                                                                            tgtAATATTCGAACCTCCGGAACCTGGAGCGCGAAAACCAATTCACCTTTTTTACCGTTTGACTGCTCGCAGATCATCTGGAACGACGCCCGc             <  2:1151009/93‑1 (MQ=255)
                                                                              tAATATTCGAACCTCCGGAACCTGGAGCGCGAAAACCAATTCACCTTTTTTACCGTTTGACTGCTCGCAGATCATCTGGAACGACGCCCGCTc           >  1:4599581/1‑93 (MQ=255)
                                                                               aaTATTCGAACCTCCGGAACCTGGAGCGCGAAAACCAATTCACCTTTTTTACCGTTTGACTGCTCGCAGATCATCTGGAACGACGCCCGCTCa          <  1:6115431/93‑1 (MQ=255)
                                                                               aaTATTCGAACCTCCGGAACCTGGAGCGCGAAAACCAATTCACCTTTTTTACCGTTTGACTGCTCGCAGATCATCTGGAACGACGCCCGCTCa          >  1:5947668/1‑93 (MQ=255)
                                                                                atatTCGAACCTCCGGAACCTGGAGCGCGAAAACCAATTCACCTTTTTTACCGTTTGACTGCTCGCAGATCATCTGGAACGACGCCCGCTCAt         <  2:7917501/93‑1 (MQ=255)
                                                                                 tatTCGACCCTCCGGAACCTGGAGCGCGAAAACCAATTCACCTTTTTTACCGTTTGACTGCTCGCAGATCATCTGGAACGACGCCCGCTCAtt        <  2:1739016/93‑1 (MQ=255)
                                                                                 tatTCGAACCTCCGGAACCTGGAGCGCGAAAACCAATTCACCTTTTTTACCGTTTGACTGCTCGCAGATCATCTGGAACGACGCCCGCTCAtt        <  1:2074388/93‑1 (MQ=255)
                                                                                 aatTCGAACCTCCGGAACCTGGAGCGCGAAAACCAATTCACCTTTTTTACCGTTTGACTGCTCGCAGATCATCTGGAACGACGCCCGCTCAtt        <  1:5744489/92‑1 (MQ=255)
                                                                                    tCGAGCCTCCGGAACCTGGAGCGCGAAAACCAATTCACCTTTTTTACCGTTTGACTGCTCGCAGATCATCTGGAACGACGCCCGCTCATTGcc     <  2:6160369/93‑1 (MQ=255)
                                                                                     cGAACCTCCGGAACCTGGAGCGCGAAAACCAATTCACCTTTTTTACCGTTTGACTGCTCGCAGATCATCTGGAACGACGCCCGCTCATTGCCa    >  1:504197/1‑93 (MQ=255)
                                                                                      gAACCTCCGGAACCTGGAGCGCGAAAACCAATTCACCTTTTTTACCGTTTGACTGCTCGCAGATCATCTGGAACGACGCCCGCTCATTGCCAt   >  1:2171122/1‑93 (MQ=255)
                                                                                          |                                                                                         
AGCCACCAGCGTAAAACAACTGGCTGACGCTGGCGTGCGGGTAGGCGATACATTGCGTATTAGCGGTACGGGAATGTGTAATATTCGAACTTCCGGAACCTGGAGCGCGAAAACCAATTCACCTTTTTTACCGTTTGACTGCTCGCAGATCATCTGGAACGACGCCCGCTCATTGCCATT  >  NC_000913/3525240‑3525419

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

BRESEQ :: bam2aln output Only 200 of 206 total aligned reads displayed.
TGAAGCCACCAGCGTAAAACAACTGGCTGACGCTGGCGTGCGGGTAGGCGATACATTGCGTATTAGCGGTACGGGAATGTGTAATATTCGAACTTCCGGAACCTGGAGCGCGAAAACCAATTCACCTTTTTTACCGTTTGACTGCTCGCAGATCATCTGGAACGACGCCCGCTCATTGCCATTACCA  >  NC_000913/3525237‑3525423
                                                                                             |                                                                                             
TGAAGCCACCAGCGTAAAACAACTGGCTGACGCTGGCGTGCGGGTAGGCGATACATTGCGTATTAGCGGTACGGGAATGTGTAATATTCGAACC                                                                                               <  SRR4302543.4215064/94‑1 (MQ=60)
 GAAGCCACCAGCGTAAAACAACTGGCTGACGCTGGCGTGCGGGTAGGCGATACATTGCGTATTAGCGGTACGGGAATGTGTAATATTCGAACCT                                                                                              <  SRR4302543.6221686/94‑1 (MQ=60)
 GAAGCCACCAGCGTAAAACAACTGGCTGACGCTGGCGTGCGGGTAGGCGATACATTGCGTATTAGCGGTACGGGAATGTGTAATATTCGAACCT                                                                                              <  SRR4302543.2807369/94‑1 (MQ=60)
 GAAGCCACCAGCGTAAAACAACTGGCTGACGCTGGCGTGCGGGTAGGCGATACATTGCGTATTAGCGGTACGGGAATGTGTAATATTCGAACCT                                                                                              <  SRR4302543.1811587/94‑1 (MQ=60)
 GAAGCCACCAGCGTAAAACAACTGGCTGACGCTGGCGTGCGGGTAGGCGATACATTGCGTATTAGCGGTACGGGAATGTGTAATATTCGAACCT                                                                                              <  SRR4302543.7464067/94‑1 (MQ=60)
 GAAGCCACCAGCGTAAAACAACTGGCTGACGCTGGCGTGCGGGTAGGCGATACATTGCGTATTAGCGGTACGGGAATGTGTAATATTCGAACCT                                                                                              <  SRR4302543.1331103/94‑1 (MQ=60)
 GAAGCCACCAGCGTAAAACAACTGGCTGACGCTGGCGTGCGGGTAGGCGATACATTGCGTATTAGCGGTACGGGAATGTGTAATATTCGAACCT                                                                                              <  SRR4302543.4885987/94‑1 (MQ=60)
 GAAGCCACCAGCGTAAAACAACTGGCTGACGCTGGCGTGCGGGTAGGCGATACATTGCGCATTAGCGGTACGGGAATGTGTAATATTCGAACCT                                                                                              >  SRR4302543.5388067/1‑94 (MQ=60)
  AAGCCACCAGCGTAAAACAACTGGCTGACGCTGGCGTGCGGGTAGGCGATACATTGCGTATTAGCGGTACGGGAATGTGTAATATTCGAACCTC                                                                                             <  SRR4302543.5200702/94‑1 (MQ=60)
   AGCCACCAGCTTAAAACAACTGGCTGACGCTGGCGTGCGGGTAGGCGATACATTGCGTATTAGCGGTACGGGAATGTGTAATATTCGAACCTCC                                                                                            <  SRR4302543.4269959/94‑1 (MQ=60)
   AGCCACCAGCGTAAAACAACTGGCTGACGCTGGCGTGCGGGTAGGCGATACATTGCGTATTAGCGGTACGGGAATGTGTAATATTCGAACCTCC                                                                                            >  SRR4302543.2209567/1‑94 (MQ=60)
   AGCCACCAGCGTAAAACAACTGGCTGACGCTGGCGTGCGGGTAGGCGATACATTGCGTATTAGCGGTACGGGAATGTGTAATATTCGAACCTCC                                                                                            >  SRR4302543.1909186/1‑94 (MQ=60)
   AGCCACCAGCGTAAAACAACTGGCTGACGCTGGCGTGCGGGTAGGCGATACATTGCGTATTAGCGGTACGGGAATGTGTAATATTCGAACCTCC                                                                                            <  SRR4302543.4741567/94‑1 (MQ=60)
    GCCACCAGCGTAAAACAACTGGCTGACGCTGGCGTGCGGGTAGGCGATACATTGCGTATTAGCGGTACGGGAATGTGTAATATTCGAACCTCCG                                                                                           >  SRR4302543.4904027/1‑94 (MQ=60)
    GCCACCAGCGTAAAACAACTGGCTGACGCTGGCGTGCGGGTAGGCGATACATTGCGTATTAGCGGTACGGGAATGTGTAATATTCGAACCTCCG                                                                                           >  SRR4302543.4904026/1‑94 (MQ=60)
    GCCACCAGCGTAAAACAACTGGCTGACGCTGGCGTGCGGGTAGGCGATACATTGCGTATTAGCGGTACGGGAATGTGTAATATTCGAACCTCCG                                                                                           <  SRR4302543.6916068/94‑1 (MQ=60)
     CCACCAGCGTAAAACAACTGGCTGACGCTGGCGTGCGGGTAGGCGATACATTGCGTATTAGCGGTACGGGAATGTGTAATATTCGAACTTCCGG                                                                                          >  SRR4302543.6180618/1‑94 (MQ=60)
      CACCAGCGTAAAACAACTGGCTGACGCTGGCGTGCGGGTAGGCGATACATTGCGTATTAGCGGTACGGGAATGTGTAATATTCGAACCTCCGGA                                                                                         >  SRR4302543.409244/1‑94 (MQ=60)
      CACCAGCGTAAAACAACTGGCTGACGCTGGCGTGCGGGTAGGCGATACATTGCGTATTAGCGGTACGGGAATGTGTAATATTCGAACCTCCGGA                                                                                         <  SRR4302543.1928205/94‑1 (MQ=60)
       ACCAGCGTAAAACAACTGGCTGACGCTGGCGTGCGGGTAGGCGATACATTGCGTATTAGCGGTACGGGAATGTGTAATATTCGAACCTCCGGAA                                                                                        >  SRR4302543.2551453/1‑94 (MQ=60)
       ACCAGCGTAAAACAACTGGCTGACGCTGGCGTGCGGGTAGGCGATACATTGCGTATTAGCGGTACGGGAATGTGTAATATTCGAACCTCCGGAA                                                                                        >  SRR4302543.2832638/1‑94 (MQ=60)
        CCAGCGTAAAACAACTGGCTGACGCTGGCGTGCGGGTAGGCGATACATTGCGTATTAGCGGTACGGGAATGTGTAATATTCGAACCTCCGGAAC                                                                                       <  SRR4302543.5734153/94‑1 (MQ=60)
        CCAGCGTAAAACAACTGGCTGACGCTGGCGTGCGGGTAGGCGATACATTGCGTATTAGCGGTACGGGAATGTGTAATATTCGAACCTCCGGAAC                                                                                       <  SRR4302543.1106741/94‑1 (MQ=60)
         CAGCGTAAAACAACTGGCTGACGCTGGCGTGCGGGTAGGCGATACATTGCGTATTAGCGGTACGGGAATGTGTAATATTCGAACCTCCGGAACC                                                                                      <  SRR4302543.1152983/94‑1 (MQ=60)
          AGCGTAAAACAACTGGCTGACGCTGGCGTGCGGGTAGGCGATACATTGCGTATTAGCGGTACGGGAATGTGTAATATTCGAACCTCCGGAACCT                                                                                     <  SRR4302543.3058883/94‑1 (MQ=60)
           GCGTAAAACAACTGGCTGACGCTGGCGTGCGGGTAGGCGATACATTGCGTATTAGCGGTACGGGAATGTGTAATATTCGAACCTCCGGAACCTG                                                                                    <  SRR4302543.6325537/94‑1 (MQ=60)
           GCGTAAAACAACTGGCTGACGCTGGCGTGCGGGTAGGCGATACATTGCGTATTAGCGGTACGGGAATGTGTAATATTCGAACCTCCGGAACCTG                                                                                    <  SRR4302543.7941428/94‑1 (MQ=60)
           GCGTAAAACAACTGGCTGACGCTGGCGTGCGGGTAGGCGATACATTGCGTATTAGCGGTACGGGAATGTGTAATATTCGAACCTCCGGAACCTG                                                                                    <  SRR4302543.3325233/94‑1 (MQ=60)
             GTAAAACAACTGGCTGACGCTGGCGTGCGGGTAGGCGATACATTGCGTATTAGCGGTACGGGAATGTGTAATATTCGAACTTCCGGAACCTGGA                                                                                  >  SRR4302543.5025225/1‑94 (MQ=60)
             GTAAAACAACTGGCTGACGCTGGCGTGCGGGTAGGCGATACATTGCGTATTAGCGGTACGGGAATGTGTAATATTCGAACCTCCGGAACCTGGA                                                                                  >  SRR4302543.5570929/1‑94 (MQ=60)
             GTAAAACAACTGGCTGACGCTGGCGTGCGGGTAGGCGATACATTGCGTATTAGCGGTACGGGAATGTGTAATATTCGAACCTCCGGAACCTGGA                                                                                  <  SRR4302543.1226389/94‑1 (MQ=60)
             GTAAAACAACTGGCTGACGCTGGCGTGCGGGTAGGCGATACATTGCGTATTAGCGGTACGGGAATGTGTAATATTCGAACCTCCGGAACCTGGA                                                                                  >  SRR4302543.5473291/1‑94 (MQ=60)
              TAAAACAACTGGCTGACGCTGGCGTGCGGGTAGGCGATACATTGCGTATTAGCGGTACGGGAATGTGTAATATTCGAACCTCCGGAACCTGGAG                                                                                 <  SRR4302543.6620707/94‑1 (MQ=60)
              TAAAACAACTGGCTGACGCTGGCGTGCGGGTAGGCGATACATTGCGTATTAGCGGTACGGGAATGTGTAATATTCGAACCTCCGGAACCTGGAG                                                                                 >  SRR4302543.1452164/1‑94 (MQ=60)
              TAAAACAACTGGCTGACGCTGGCGTGCGGGTAGGCGATACATTGCGTATTAGCGGTACGGGAATGTGTAATATTCGAACCTCCGGAACCTGGAG                                                                                 <  SRR4302543.896697/94‑1 (MQ=60)
              TAAAACAACTGGCTGACGCTGGCGTGCGGGTAGGCGATACATTGCGTATTAGCGGTACGGGAATGTGTAATATTCGAACCTCCGGAACCTGGAG                                                                                 <  SRR4302543.936764/94‑1 (MQ=60)
               AAAACAACTGGCTGACGCTGGCGTGCGGGTAGGCGATACATTGCGTATTAGCGGTACGGGAATGTGTAATATTCGAACCTCCGGAACCTGGAGC                                                                                <  SRR4302543.5360936/94‑1 (MQ=60)
               AAAACAACTGGCTGACGCTGGCGTGCGGGTAGGCGATACATTGCGTATTAGCGGTACGGGAATGTGTAATATTCGAACCTCCGGAACCTGGAGC                                                                                >  SRR4302543.4159759/1‑94 (MQ=60)
               AAAACAACTGGCTGACGCTGGCGTGCGGGTAGGCGATACATTGCGTATTAGCGGTACGGGAATGTGTAATATTCGAACCTCCGGAACCTGGAGC                                                                                >  SRR4302543.4159758/1‑94 (MQ=60)
                AAACAACTGGCTGACGCTGGCGTGCGGGTAGGCGATACATTGCGTATTAGCGGTACGGGAATGTGTAATATTCGAACCTCCGGAACCTGGAGCG                                                                               <  SRR4302543.3368438/94‑1 (MQ=60)
                AAACAACTGGCTGACGCTGGCGTGCGGGTAGGCGATACATTGCGTATTAGCGGTACGGGAATGTGTAATATTCGAACCTCCGGAACCTGGAGCG                                                                               <  SRR4302543.7913335/94‑1 (MQ=60)
                AAACAACTGGCTGACGCTGGCGTGCGGGTAGGCGATACATTGCGTATTAGCGGTACGGGAATGTGTAATATTCGAACCTCCGGAACCTGGAGCG                                                                               >  SRR4302543.4769721/1‑94 (MQ=60)
                 AACAACTGGCTGACGCTGGCGTGCGGGTAGGCGATACATTGCGTATTAGCGGTACGGGAATGTGTAATATTCGAACCTCCGGAACCTGGAGCGC                                                                              >  SRR4302543.170384/1‑94 (MQ=60)
                 AACAACTGGCTGACGCTGGCGTGCGGGTAGGCGATACATTGCGTATTAGCGGTACGGGAATGTGTAATATTCGAACCTCCGGAACCTGGAGCGC                                                                              >  SRR4302543.3028586/1‑94 (MQ=60)
                  ACAACTGGCTGACGCTGGCGTGCGGGTAGGCGATACATTGCGTATTAGCGGTACGGGAATGTGTAATATTCGAACCTCCGGAACCTGGAGCGCG                                                                             <  SRR4302543.24768/94‑1 (MQ=60)
                   CAACTGGCTGACGCTGGCGTGCGGGTAGGCGATACATTGCGTATTAGCGGTACGGGAATGTGTAATATTCGAACCTCCGGAACCTGGAGCGCGA                                                                            >  SRR4302543.1387373/1‑94 (MQ=60)
                   CAACTGGCTGACGCTGGCGTGCGGGTAGGCGATACATTGCGTATTAGCGGGACGGGAATGTGTAATATTCGAACCTCCGGAACCTGGAGCGCGA                                                                            >  SRR4302543.5080963/1‑94 (MQ=60)
                    AACTGGCTGACGCTGGCGTGCGGGTAGGCGATACATTGCGTATTAGCGGTACGGGAATGTGTAATATTCGAACCTCCGGAACCTGGAGCGCGAA                                                                           <  SRR4302543.3939433/94‑1 (MQ=60)
                    AACTGGCTGACGCTGGCGTGCGGGTAGGCGATACATTGCGTATTAGCGGTACGGGAATGTGTAATATTCGAACCTCCGGAACCTGGAGCGCGAA                                                                           >  SRR4302543.4344169/1‑94 (MQ=60)
                     ACTGGCTGACGCTGGCGTGCGGGTAGGCGATACATTGCGTATTAGCGGTACGGGAATGTGTAATATTCGAACCTCCGGAACCTGGAGCGCGAAA                                                                          <  SRR4302543.5564176/94‑1 (MQ=60)
                     ACTGGCTGACGCTGGCGTGCGGGTAGGCGATACATTGCGTATTAGCGGTACGGGAATGTGTAATATTCGAACCTCCGGAACCTGGAGCGCGAAA                                                                          <  SRR4302543.1476426/94‑1 (MQ=60)
                      CTGGCTGACGCTGGCGTGCGGGTAGGCGATACATTGCGTATTAGCGGTACGGGAATGTGTAATATTCGAACCTCCGGAACCTGGAGCGCGAAAA                                                                         >  SRR4302543.7068556/1‑94 (MQ=60)
                       TGGCTGACGCTGGCGTGCGGGTAGGCGATACATTGCGTATTAGCGGTACGGGAATGTGTAATATTCGAACCTCCGGAACCTGGAGCGCGAAAAC                                                                        <  SRR4302543.5319933/94‑1 (MQ=60)
                       TGGCTGACGCTGGCGTGCGGGTAGGCGATACATTGCGTATTAGCGGTACGGGAATGTGTAATATTCGAACCTCCGGAACCTGGAGCGCGAAAAC                                                                        <  SRR4302543.731192/94‑1 (MQ=60)
                        GGCTGACGCTGGCGTGCGGGTAGGCGATACATTGCGTATTAGCGGTACGGGAATGTGTAATATTCGAACCTCCGGAACCTGGAGCGCGAAAACC                                                                       >  SRR4302543.4620917/1‑94 (MQ=60)
                         GCTGACGCTGGCGTGCGGGTAGGCGATACATTGCGTATTAGCGGTACGGGAATGTGTAATATTCGAACCTCCGGAACCTGGAGCGCGAAAACCA                                                                      <  SRR4302543.3312183/94‑1 (MQ=60)
                         GCTGACGCTGGCGTGCGGGTAGGCGATACATTGCGTATTAGCGGTACGGGAATGTGTAATATTCGAACCTCCGGAACCTGGAGCGCGAAAACCA                                                                      >  SRR4302543.5100551/1‑94 (MQ=60)
                         GCTGACGCTGGCGTGCGGGTAGGCGATACATTGCGTATTAGCGGTACGGGAATGTGTAATATTCGAACCTCCGGAACCTGGAGCGCGAAAACCA                                                                      <  SRR4302543.3153043/94‑1 (MQ=60)
                         GCTGACGCTGGCGTGCGGGTAGGCGATACATTGCGTATTAGCGGTACGGGAATGTGTAATATTCGAACCTCCGGAACCTGGAGCGCGAAAACCA                                                                      >  SRR4302543.5627377/1‑94 (MQ=60)
                          CTGACGCTGGCGTGCGGGTAGGCGATACATTGCGTATTAGCGGTACGGGAATGTGTAATATTCGAACCTCCGGAACCTGGAGCGCGAAAACCAA                                                                     >  SRR4302543.6423647/1‑94 (MQ=60)
                          CTGACGCTGGCGTGCGGGTAGGCGATACATTGCGTATTAGCGGTACGGGAATGTGTAATATTCGAACCTCCGGAACCTGGAGCGCGAAAACCAA                                                                     >  SRR4302543.4769122/1‑94 (MQ=60)
                          CTGACGCTGGCGTGCGGGTAGGCGATACATTGCGTATTAGCGGTACGGGAATGTGTAATATTCGAACCTCCGGAACCTGGAGCGCGAAAACCAA                                                                     >  SRR4302543.3551273/1‑94 (MQ=60)
                           TGAGGCTGGCGTGCGGGTAGGCGATACATTGCGGATTAGCGGGACGGGAATGTGTAATATTCGAACCTACGGAACCTGGAGCTCGAAAACCGAT                                                                    >  SRR4302543.828089/1‑94 (MQ=60)
                           TGACGCTGGCGTGCGGGTAGGCGATACATTGCGTATTAGCGGTACGGGAATGTGTAATATTCGAACCTCCGGAACCTGGAGCGCGAAAACCAAT                                                                    <  SRR4302543.3727266/94‑1 (MQ=60)
                           TGACGCTGGCGTGCGGGTAGGCGATACATTGCGTATTAGCGGTACGGGAATGTGTAATATTCGAACCTCCGGAACCTGGAGCGCGAAAACCAAT                                                                    >  SRR4302543.3577761/1‑94 (MQ=60)
                           TGACGCTGGCGTGCGGGTAGGCGATACATTGCGTATTAGCGGTACGGGAATGTGTAATATTCGAACCTCCGGAACCTGGAGCGCGAAAACCAAT                                                                    >  SRR4302543.976358/1‑94 (MQ=60)
                            GACGCTGGCGTGCGGGTAGGCGATACATTGCGTATTAGCGGTACGGGAATGTGTAATATTCGAACCTCCGGAACCTGGAGCGCGAAAACCAATT                                                                   <  SRR4302543.808079/94‑1 (MQ=60)
                            GACGCTGGCGTGCGGGTAGGCGATACATTGCGTATTAGCGGTACGGGAATGTGTAATATTCGAACCTCCGGAACCTGGAGCGCGAAAACCAATT                                                                   >  SRR4302543.1933826/1‑94 (MQ=60)
                             ACGCTGGCGTGCGGGTAGGCGATACATTGCGTATTAGCGGTACGGGAATGTGTAATATTCGAACCTCCGGAACCTGGAGCGCGAAAACCAATTC                                                                  >  SRR4302543.6565091/1‑94 (MQ=60)
                              CGCTGGCGTGCGGGTAGGCGATACATTGCGTATTAGCGGTACGGGAATGTGTAATATTCGAACCTCCGGAACCTGGAGCGCGAAAACCAATTCA                                                                 >  SRR4302543.2146515/1‑94 (MQ=60)
                              CGCTGGCGTGCGGGTAGGCGATACATTGCGTATTAGCGGTACGGGAATGTGTAATATTCGAACCTCCGGAACCTGGAGCGCGAAAACCAATTCA                                                                 >  SRR4302543.4609125/1‑94 (MQ=60)
                                CTGGCGTGCGGGTAGGCGATACATTGCGTATTAGCGGTACGGGAATGTGTAATATTCGAACCTCCGGAACCTGGAGCGCGAAAACCAATTCACC                                                               <  SRR4302543.3225196/94‑1 (MQ=60)
                                   GCGTGCGGGTAGGCGATACATTGCGTATTAGCGGTACGGGAATGTGTAATATTCGAACCTCCGGAACCTGGAGCGCGAAAACCAATTCACCTTT                                                            <  SRR4302543.950969/94‑1 (MQ=60)
                                   GCGTGCGGGTAGGCGATACATTGCGTATTAGCGGTACGGGAATGTGTAATATTCGAACCTCCGGAACCTGGAGCGCGAAAACCAATTCACCTTT                                                            <  SRR4302543.5623984/94‑1 (MQ=60)
                                   GCGTGCGGGTAGGCGATACATTGCGTATTAGCGGTACGGGAATGTGTAATATTCGAACCTCCGGAACCTGGAGCGCGAAAACCAATTCACCTTT                                                            <  SRR4302543.1488395/94‑1 (MQ=60)
                                      TGCGGGTAGGCGATACATTGCGTATTAGCGGTACGGGAATGTGTAATATTCGAACCTCCGGAACCTGGAGCGCGAAAACCAATTCACCTTTTTT                                                         <  SRR4302543.1482670/94‑1 (MQ=60)
                                      TGCGGGTAGGCGATACATTGCGTATTAGCGGTACGGGAATGTGTAATATTCGAACCTCCGGAACCTGGAGCGCGAAAACCAATTCACCTTTTTT                                                         <  SRR4302543.3325572/94‑1 (MQ=60)
                                      TGCGGGTAGGCGATACATTGCGTATTAGCGGTACGGGAATGTGTAATATTCGAACCTCCGGAACCTGGAGCGCGAAAACCAATTCACCTTTTTT                                                         <  SRR4302543.3298231/94‑1 (MQ=60)
                                        CGGGTAGGCGATACATTGCGTATTAGCGGTACGGGAATGTGTAATATTCGAACCTCCGGAACCTGGAGCGCGAAAACCAATTCACCTTTTTTAC                                                       >  SRR4302543.1259466/1‑94 (MQ=60)
                                         GGGTAGGCGATACATTGCGTATTAGCGGTACGGGAATGTGTAATATTCGAACCTCCGGAACCTGGAGCGCGAAAACCAATTCACCTTTTTTACC                                                      <  SRR4302543.4589955/94‑1 (MQ=60)
                                           GTAGGCGATACATTGCGTATTAGCGGTACGGGAATGTGTAATATTCGAACCTCCGGAACCTGGAGCGCGAAAACCAATTCACCTTTTTTACCGT                                                    >  SRR4302543.6115028/1‑94 (MQ=60)
                                           GTAGGCGATACATTGCGTATTAGCGGTACGGGAATGTGTAATATTCGAACCTCCGGAACCTGGAGCGCGAAAACCAATTCACCTTTTTTACCGT                                                    >  SRR4302543.3699592/1‑94 (MQ=60)
                                           GTAGGCGAAACATTGCGTATTAGCGGTACGGGAATGTGTAATATTCGAACCTCCGGAACCTGGAGCGCGAAAACCAATTCACCTTTTTTACCGT                                                    <  SRR4302543.2242052/94‑1 (MQ=60)
                                            TAGGCGATACATTGCGTATTAGCGGTACGGGAATGTGTAATATTCGAACCTCCGGAACCTGGAGCGCGAAAACCAATTCACCTTTTTTACCGTT                                                   >  SRR4302543.6786570/1‑94 (MQ=60)
                                            TAGGCGATACATTGCGTATTAGCGGTACGGGAATGTGTAATATTCGAACCTCCGGAACCTGGAGCGCGAAAACCAATTCACCTTTTTTACCGTT                                                   <  SRR4302543.3557720/94‑1 (MQ=60)
                                              GGCGATACATTGCGTATTAGCGGTACGGGAATGTGTAATATTCGAACCTCCGGAACCTGGAGCGCGAAAACCAATTCACCTTTTTTACCGTTTG                                                 <  SRR4302543.7607984/94‑1 (MQ=60)
                                              GGCGATACATTGCGTATTAGCGGTACGGGAATGTGTAATATTCGAACCTCCGGAACCTGGAGCGCGAAAACCAATTCACCTTTTTTACCGTTTG                                                 <  SRR4302543.6950470/94‑1 (MQ=60)
                                              GGCGATACATTGCGTATTAGCGGTACGGGAATGTGTAATATTCGAACCTCCGGAACCTGGAGCGCGAAAACCAATTCACCTTTTTTACCGTTTG                                                 <  SRR4302543.7353871/94‑1 (MQ=60)
                                               GCGATACATTGCGTATTAGCGGTACGGGAATGTGTAATATTCGAACCTCCGGAACCTGGAGCGCGAAAACCAATTCACCTTTTTTACCGTTTGA                                                >  SRR4302543.318568/1‑94 (MQ=60)
                                               GCGATACATTGCGTATTAGCGGTACGGGAATGTGTAATATTCGAACCTCCGGAACCTGGAGCGCGAAAACCAATTCACCTTTTTTACCGTTTGA                                                <  SRR4302543.5534781/94‑1 (MQ=60)
                                               GCGATACATTGCGTATTAGCGGTACGGGAATGTGTAATATTCGAACCTCCGGAACCTGGAGCGCGAAAACCAATTCACCTTTTTTACCGTTTGA                                                <  SRR4302543.3886791/94‑1 (MQ=60)
                                                CGATACATTGCGTATTAGCGGTACGGGAATGTGTAATATTCGAACCTCCGGAACCTGGAGCGCGAAAACCAATTCACCTTTTTTACCGTTTGAC                                               >  SRR4302543.7467673/1‑94 (MQ=60)
                                                CGATACATTGCGTATTAGCGGTACGGGAATGTGTAATATTCGAACCTCCGGAACCTGGAGCGCGAAAACCAATTCACCTTTTTTACCGTTTGAC                                               <  SRR4302543.7417350/94‑1 (MQ=60)
                                                CGATACATTGCGTATTAGCGGTACGGGAATGTGTAATATTCGAACCTCCGGAACCTGGAGCGCGAAAACCAATTCACCTTTTTTACCGTTTGAC                                               >  SRR4302543.6764614/1‑94 (MQ=60)
                                                CGATACATTGCGTATTAGCGGTACGGGAATGTGTAATATTCGAACCTCCGGAACCTGGAGCGCGAAAACCAATTCACCTTTTTTACCGTTTGAC                                               >  SRR4302543.2362458/1‑94 (MQ=60)
                                                 GATACATTGCGTATTAGCGGTACGGGAATGTGTAATATTCGAACCTCCGGAACCTGGAGCGCGAAAACCAATTCACCTTTTTTACCGTTTGACT                                              >  SRR4302543.7534130/1‑94 (MQ=60)
                                                 GATACATTGCGTATTAGCGGTACGGGAATGTGTAATATTCGAACCTCCGGAACCTGGAGCGCGAAAACCAATTCACCTTTTTTACCGTTTGACT                                              <  SRR4302543.1062832/94‑1 (MQ=60)
                                                 GATACATTGCGTATTAGCGGTACGGGAATGTGTAATATTCGAACCTCCGGAACCTGGAGCGCGAAAACCAATTCACCTTTTTTACCGTTTGACT                                              <  SRR4302543.6970831/94‑1 (MQ=60)
                                                 GATACATTGCGTATTAGCGGTACGGGAATGTGTAATATTCGAACCTCCGGAACCTGGAGCGCGAAAACCAATTCACCTTTTTTACCGTTTGACT                                              >  SRR4302543.825405/1‑94 (MQ=60)
                                                 GATACATTGCGTATTAGCGGTACGGGAATGTGTAATATTCGAACCTCCGGAACCTGGAGCGCGAAAACCAATTCACCTTTTTTACCGTTTGACT                                              >  SRR4302543.6701917/1‑94 (MQ=60)
                                                  ATACATTGCGTATTAGCGGTACGGGAATGTGTAATATTCGAACCTCCGGAACCTGGAGCGCGAAAACCAATTCACCTTTTTTACCGTTTGACTG                                             >  SRR4302543.7980235/1‑94 (MQ=60)
                                                  ATACATTGCGTATTAGCGGTACGGGAATGTGTAATATTCGAACCTCCGGAACCTGGAGCGCGAAAACCAATTCACCTTTTTTACCGTTTGACTG                                             <  SRR4302543.5999719/94‑1 (MQ=60)
                                                  ATACATTGCGTATTAGCGGTACGGGAATGTGTAATATTCGAACCTCCGGAACCTGGAGCGCGAAAACCAATTCACCTTTTTTACCGTTTGACTG                                             <  SRR4302543.1046659/94‑1 (MQ=60)
                                                   TACATTGCGTATTAGCGGTACGGGAATGTGTAATATTCGAACCTCCGGAACCTGGAGCGCGAAAACCAATTCACCTTTTTTACCGTTTGACTGC                                            >  SRR4302543.3848036/1‑94 (MQ=60)
                                                   TACATTGCGTATTAGCGGTACGGGAATGTGTAATATTCGAACCTCCGGAACCTGGAGCGCGAAAACCAATTCACCTTTTTTACCGTTTGACTGC                                            >  SRR4302543.4163928/1‑94 (MQ=60)
                                                    ACATTGCGTATTAGCGGTACGGGAATGTGTAATATTCGAACCTCCGGAACCTGGAGCGCGAAAACCAATTCACCTTTTTTACCGTTTGACTGCT                                           <  SRR4302543.2643384/94‑1 (MQ=60)
                                                    ACATTGCGTATTAGCGATACGGGAATGTGTAATATTCGAACCTCCGGAACCTGGAGCGCGAAAACCAATTCACCTTTTTTACCGTTTGACTGCT                                           <  SRR4302543.7101384/94‑1 (MQ=60)
                                                     CATTGCGTATTAGCGGTACGGGAATGTGTAATATTCGAACCTCCGGAACCTGGAGCGCGAAAACCAATTCACCTTTTTTACCGTTTGACTGCTC                                          <  SRR4302543.944602/94‑1 (MQ=60)
                                                     CATTGCGTATTAGCGGTACGGGAATGTGTAATATTCGAACCTCCGGAACCTGGAGCGCGAAAACCAATTCACCTTTTTTACCGTTTGACTGCTC                                          >  SRR4302543.5046021/1‑94 (MQ=60)
                                                      ATTGCGTATTAGCGGTACGGGAATGTGTAATATTCGAACCTCCGGAACCTGGAGCGCGAAAACCAATTCACCTTTTTTACGGTTTGACTGCTCG                                         >  SRR4302543.6445056/1‑94 (MQ=60)
                                                      ATTGCGTATTAGCGGTACGGGAATGTGTAATATTCGAACCTCCGGAACCTGGAGCGCGAAAACCAATTCACCTTTTTTACCGTTTGACTGCTCG                                         >  SRR4302543.6445057/1‑94 (MQ=60)
                                                      ATTGCGTATTAGCGGTACGGGAATGTGTAATATTCGAACCTCCGGAACCTGGAGCGCGAAAACCAATTCACCTTTTTTACCGTTTGACTGCTCG                                         <  SRR4302543.896703/94‑1 (MQ=60)
                                                       TTGCGTATTAGCGGTACGGGAATGTGTAATATTCGAACCTCCGGAACCTGGAGCGCGAAAACCAATTCGCCTTTTTTACCGTTTGACTGCTCGC                                        <  SRR4302543.5694934/94‑1 (MQ=60)
                                                       TTGCGTATTAGCGGTACGGGAATGTGTAATATTCGAACCTCCGGAACCTGGAGCGCGAAAACCAATTCACCTTTTTTACCGTTTGACTGCTCGC                                        >  SRR4302543.2127221/1‑94 (MQ=60)
                                                        TGCGTATTAGCGGTACGGGAATGTGTAATATTCGAACCTCCGGAACCTGGAGCGCGAAAACCAATTCACCTTTTTTACCGTTTGACTGCTCGCA                                       >  SRR4302543.7527671/1‑94 (MQ=60)
                                                        TGCGTATTAGCGGTACGGGAATGTGTAATATTCGAACCTCCGGAACCTGGAGCGCGAAAACCAATTCACCTTTTTTACCGTTTGACTGCTCGCA                                       >  SRR4302543.5428440/1‑94 (MQ=60)
                                                         GCGTATTAGCGGTACGGGAATGTGTAATATTCGCACCTCCGGAACCTGGAGCGCGAAAACCAATTCACCTTTTTTACCGTTTGACTGCTCGCAG                                      <  SRR4302543.6689637/94‑1 (MQ=60)
                                                         GCGTATTAGCGGTACGGGAATGTGTAATATTCGAACCTCCGGAACCTGGAGCGCGAAAACCAATTCACCTTTTTTACCGTTTGACTGCTCGCAG                                      <  SRR4302543.258193/94‑1 (MQ=60)
                                                         GCGTATTAGCGGTACGGGAATGTGTAATATTCGAACCTCCGGAACCTGGAGCGCGAAAACCAATTCACCTTTTTTACCGTTTGACTGCTCGCAG                                      <  SRR4302543.258192/94‑1 (MQ=60)
                                                         GCGTATTAGCGGTACGGGAATGTGTAATATTCGAACCTCCGGAACCTGGAGCGCGAAAACCAATTCACCTTTTTTACCGTTTGACTGCTCGCAG                                      <  SRR4302543.4855356/94‑1 (MQ=60)
                                                          CGTATTAGCGGTACGGGAATGTGTAATATTCGAACCTCCGGAACCTGGAGCGCGAAAACCAATTCACCTTTTTTACCGTTTGACTGCTCGCAGA                                     >  SRR4302543.5668095/1‑94 (MQ=60)
                                                           GTATTAGCGGTACGGGAATGTGTAATATTCGAACCTCCGGAACCTGGAGCGCGAAAACCAATTCACCTTTTTTACCGTTTGACTGCTCGCAGAT                                    <  SRR4302543.1169033/94‑1 (MQ=60)
                                                           GTATTAGCGGTACGGGAATGTGTAATATTCGAACCTCCGGAACCTGGAGCGCGAAAACCAATTCACCTTTTTTACCGTTTGACTGCTCGCAGAT                                    >  SRR4302543.1041470/1‑94 (MQ=60)
                                                           GTATTAGCGGTACGGGAATGTGTAATATTCGAACCTCCGGAACCTGGAGCGCGAAAACCAATTCACCTTTTTTACCGTTTGACTGCTCGCAGAT                                    >  SRR4302543.5762673/1‑94 (MQ=60)
                                                           GTATTAGCGGTACGGGAATGTGTAATATTCGAACCTCCGGAACCTGGAGCGCGAAAACCAATTCACCTTTTTTACCGTTTGACTGCTCGCAGAT                                    <  SRR4302543.5364901/94‑1 (MQ=60)
                                                            TATTAGCGGTACGGGAATGTGTAATATTCGAACCTCCGGAACCTGGAGCGCGAAAACCAATTCACCTTTTTTACCGTTTGACTGCTCGCAGATC                                   >  SRR4302543.7850365/1‑94 (MQ=60)
                                                            TATTAGCGGTACGGGAATGTGTAATATTCGAACCTCCGGAACCTGGAGCGCGAAAACCAATTCACCTTTTTTACCGTTTGACTGCTCGCAGATC                                   <  SRR4302543.7212847/94‑1 (MQ=60)
                                                            TATTAGCGGTACGGGAATGTGTAATATTCGAACCTCCGGAACCTGGAGCGCGAAAACCAATTCACCTTTTTTACCGTTTGACTGCTCGCAGATC                                   >  SRR4302543.4856749/1‑94 (MQ=60)
                                                             ATTAGCGGTACGGGAATGTGTAATATTCGAACCTCCGGAACCTGGAGCGCGAAAACCAATTCACCTTTTTTACCGTTTGACTGCTCGCAGATCA                                  <  SRR4302543.4629030/94‑1 (MQ=60)
                                                              TTAGCGGTACGGGAATGTGTAATATTCGAACCTCCGGAACCTGGAGCGCGAAAACCAATTCACCTTTTTTACCGTTTGACTGCTCGCAGATCAT                                 <  SRR4302543.6717347/94‑1 (MQ=60)
                                                               TAGCGGTACGGGAATGTGTAATATTCGAACCTCCGGAACCTGGAGCGCGAAAACCAATTCACCTTTTTTACCGTTTGACTGCTCGCAGATCATC                                >  SRR4302543.5371049/1‑94 (MQ=60)
                                                               TAGCGGTACGGGAATGTGTAATATTCGAACCTCCGGAACCTGGAGCGCGAAAACCAATTCACCTTTTTTACCGTTTGACTGCTCGCAGATCATC                                <  SRR4302543.2775976/94‑1 (MQ=60)
                                                                AGCGGTACGGGAATGTGTAATATTCGAACCTCCGGAACCTGGAGCGCGAAAACCAATTCACCTTTTTTACCGTTTGACTGCTCGCAGATCATCT                               <  SRR4302543.3832472/94‑1 (MQ=60)
                                                                AGCGGTACGGGAATGTGTAATATTCGAACCTCCGGAACCTGGAGCGCGAAAACCAATTCACCTTTTTTACCGTTTGACTGCTCGCAGATCATCT                               <  SRR4302543.6263181/94‑1 (MQ=60)
                                                                 GCGGTACGGGAATGTGTAATATTCGAACCTCCGGAACCTGGAGCGCGAAAACCAATTCACCTTTTTTACCGTTTGACTGCTCGCAGATCATCTG                              >  SRR4302543.2252109/1‑94 (MQ=60)
                                                                 GCGGTACGGGAATGTGTAATATTCGAACCTCCGGAACCTGGAGCGCGAAAACCAATTCACCTTTTTTACCGTTTGACTGCTCGCAGATCATCTG                              >  SRR4302543.2252110/1‑94 (MQ=60)
                                                                  CGGTACGGGAATGTGTAATATTCGAACCTCCGGAACCTGGAGCGCGAAAACCAATTCACCTTTTTTACCGTTTGACTGCTCGCAGATCATCTGG                             <  SRR4302543.6889974/94‑1 (MQ=60)
                                                                  CGGTACGGGAATGTGTAATATTCGAACCTCCGGAACCTGGAGCGCGAAAACCAATTCACCTTTTTTACCGTTTGACTGCTCGCAGATCATCTGG                             >  SRR4302543.914817/1‑94 (MQ=60)
                                                                   GGTACGGGAATGTGTAATATTCGAACCTCCGGAACCTGGAGCGCGAAAACCAATTCACCTTTTTTACCGTTTGACTGCTCGCAGATCATCTGGA                            >  SRR4302543.3272250/1‑94 (MQ=60)
                                                                    GTACGGGAATGTGTAATATTCGAACCTCCGGAACCTGGAGCGCGAAAACCAATTCACCTTTTTTACCGTTTGACTGCTCGCAGATCATCTGGAA                           >  SRR4302543.7521775/1‑94 (MQ=60)
                                                                     TACGGGAATGTGTAATATTCGAACCTCCGGAACCTGGAGCGCGAAAACCAATTCACCTTTTTTACCGTTTGACTGCTCGCAGATCATCTGGAAC                          <  SRR4302543.3322478/94‑1 (MQ=60)
                                                                     TACGGGAATGTGTAATATTCGAACCTCCGGAACCTGGAGCGCGAAAACCAATTCACCTTTTTTACCGTTTGACTGCTCGCAGATCATCTGGAAC                          <  SRR4302543.3457294/94‑1 (MQ=60)
                                                                     TACGGGAATGTGTAATATTCGAACCTCCGGAACCTGGAGCGCGAAAACCAATTCACCTTTTTTACCGTTTGACTGCTCGCAGATCATCTGGAAC                          <  SRR4302543.3322477/94‑1 (MQ=60)
                                                                     TACGGGAATGTGTAATATTCGAACCTCCGGAACCTGGAGCGCGAAAACCAATTCACCTTTTTTACCGTTTGACTGCTCGCAGATCATCTGGAAC                          <  SRR4302543.3097002/94‑1 (MQ=60)
                                                                      ACGGGAATGTGTAATATTCGAACCTCCGGAACCTGGAGCGCGAAAACCAATTCACCTTTTTTACCGTTTGACTGCTCGCAGATCATCTGGAACG                         >  SRR4302543.7550464/1‑94 (MQ=60)
                                                                      ACGGGAATGTGTAATATTCGAACCTCCGGAACCTGGAGCGCGAAAACCAATTCACCTTTTTTACCGTTTGACTGCTCGCAGATCATCTGGAACG                         <  SRR4302543.7381284/94‑1 (MQ=60)
                                                                      ACGGGAATGTGTAATATTCGAACCTCCGGAACCTGGAGCGCGAAAACCAATTCACCTTTTTTACCGTTTGACTGCTCGCAGATCATCTGGAACG                         >  SRR4302543.1332109/1‑94 (MQ=60)
                                                                       CGGGAATGTGTAATATTCGAACCTCCGGAACCTGGAGCGCGAAAACCAATTCACCTTTTTTACCGTTTGACTGCTCGCAGATCATCTGGAACGA                        >  SRR4302543.6229569/1‑94 (MQ=60)
                                                                       CGGGAATGTGTAATATTCGAACCTCCGGAACCTGGAGCGCGAAAACCAATTCACCTTTTTTACCGTTTGACTGCTCGCAGATCATCTGGAACGA                        >  SRR4302543.3980281/1‑94 (MQ=60)
                                                                        GGGAATGTGTAATATTCGAGCTTCCGGAACCTGGAGCGCGAAAACCAATTCACCTTTTTTACCGTTTGACTGCTCGCAGATCATCTGGAACGAC                       <  SRR4302543.5269093/94‑1 (MQ=60)
                                                                        GGGAATGTGTAATATTCGACCCTCCGGAACCTGGAGCGCGAAAACCAATTCACCTTTTTTACCGTTTGACTGCTCGCAGATCATCTGGAACGAC                       <  SRR4302543.5891675/94‑1 (MQ=60)
                                                                        GGGAATGTGTAATATTCGAACCTCCGGAACCTGGAGCGCGAAAACCAATTCACCTTTTTTACCGTTTGACTGCTCGCAGATCATCTGGAACGAC                       >  SRR4302543.4390531/1‑94 (MQ=60)
                                                                        GGGAATGTGTAATATTCGAACCTCCGGAACCTGGAGCGCGAAAACCAATTCACCTTTTTTACCGTTTGACTGCTCGCAGATCATCTGGAACGAC                       <  SRR4302543.2768101/94‑1 (MQ=60)
                                                                        GGGAATGTGTAATATTCGAACCTCCGGAACCTGGAGCGCGAAAACCAATTCACCTTTTTTACCGTTTGACTGCTCGCAGATCATCTGGAACGAC                       <  SRR4302543.1925643/94‑1 (MQ=60)
                                                                        GGGAATGTGTAATATTCGAACCTCCGGAACCTGGAGCGCGAAAACCAATTCACCTTTTTTACCGTTTGACTGCTCGCAGATCATCTGGAACGAC                       >  SRR4302543.3685698/1‑94 (MQ=60)
                                                                         GGAATGTGTAATATTCGAAGCTCCGGAACCTGGAGCGCGAAAGCCAATTCACCTTTTTTACCGTTTGACTGCTCGCAGATCATCTGGAACGACG                      <  SRR4302543.3038067/94‑1 (MQ=60)
                                                                         GGAATGTGTAATATTCGAACCTCCGGAACCTGGAGCGCGAAAACCAATTCACCTTTTTTACCGTTTGACTGCTCGCAGATCATCTGGAACGACG                      >  SRR4302543.2145268/1‑94 (MQ=60)
                                                                         GGAATGTGTAATATTCGAACCTCCGGAACCTGGAGCGCGAAAACCAATTCACCTTTTTTACCGTTTGACTGCTCGCAGATCATCTGGAACGACG                      >  SRR4302543.4113007/1‑94 (MQ=60)
                                                                            ATGTGTAATATTCGAACCTCCGGAACCTGGAGCGCGAAAACCAATTCACCTTTTTTACCGTTTGACTGCTCGCAGATCATCTGGAACGACGCCC                   <  SRR4302543.5595043/94‑1 (MQ=60)
                                                                            ATGTGTAATATTCGAACCTCCGGAACCTGGAGCGCGAAAACCAATTCACCTTTTTTACCGTTTGACTGCTCGCAGATCATCTGGAACGACGCCC                   >  SRR4302543.3845045/1‑94 (MQ=60)
                                                                            ATGTGTAATATTCGAACCTCCGGAACCTGGAGCGCGAAAACCAATTCACCTTTTTTACCGTTTGACTGCTCGCAGATCATCTGGAACGACGCCC                   >  SRR4302543.1742534/1‑94 (MQ=60)
                                                                            ATGTGTAATATTCGAACCTCCGGAACCTGGAGCGCGAAAACCAATTCACCTTTTTTACCGTTTGACTGCTCGCAGATCATCTGGAACGACGCCC                   >  SRR4302543.1616126/1‑94 (MQ=60)
                                                                             TGTGTAATATTCGAACCTCCGGAACCTGGAGCGCGAAAACCAATTCACCTTTTTTACCGTTTGACTGCTCGCAGATCATCTGGAACGACGCCCG                  >  SRR4302543.2476415/1‑94 (MQ=60)
                                                                             TGTGTAATATTCGAACCTCCGGAACCTGGAGCGCGAAAACCAATTCACCTTTTTTACCGTTTGACTGCTCGCAGATCATCTGGAACGACGCCCG                  <  SRR4302543.6881635/94‑1 (MQ=60)
                                                                             TGTGTAATATTCGAACCTCCGGAACCTGGAGCGCGAAAACCAATTCACCTTTTTTACCGTTTGACTGCTCGCAGATCATCTGGAACGACGCCCG                  <  SRR4302543.5125053/94‑1 (MQ=60)
                                                                              GTGTAATATTCGAACCTCCGGAACCTGGAGCGCGAAAACCAATTCACCTTTTTTACCGTTTGACTGCTCGCAGATCATCTGGAACGACGCCCGC                 >  SRR4302543.3858716/1‑94 (MQ=60)
                                                                              GTGTAATATTCGAACCTCCGGAACCTGGAGCGCGAAAACCAATTCACCTTTTTTACCGTTTGACTGCTCGCAGATCATCTGGAACGACGCCCGC                 <  SRR4302543.7234028/94‑1 (MQ=60)
                                                                              GTGTAATATTCGAACCTCCGGAACCTGGAGCGCGAAAACCAATTCACCTTTTTTACCGTTTGACTGCTCGCAGATCATCTGGAACGACGCCCGC                 >  SRR4302543.2741666/1‑94 (MQ=60)
                                                                                GTAATATTCGAACCTCCGGAACCTGGAGCGCGAAAACCAATTCACCTTTTTTACCGTTTGACTGCTCGCAGATCATCTGGAACGACGCCCGCTC               >  SRR4302543.4641368/1‑94 (MQ=60)
                                                                                 TAATATTCGAACCTCCGGAACCTGGAGCGCGAAAACCAATTCACCTTTTTTACCGTTTGACTGCTCGCAGATCATCTGGTACGACGCCCGCTCT              >  SRR4302543.6002103/1‑94 (MQ=60)
                                                                                 TAATATTCGAACCTCCGGAACCTGGAGCGCGAAAACCAATTCACCTTTTTTACCGTTTGACTGCTCGCAGATCATCTGGAACGACGCCCGCTCA              <  SRR4302543.1845050/94‑1 (MQ=60)
                                                                                 TAATATTCGAACCTCCGGAACCTGGAGCGCGAAAACCAATTCACCTTTTTTACCGTTTGACTGCTCGCAGATCATCTGGAACGACGCCCGCTCA              >  SRR4302543.6539385/1‑94 (MQ=60)
                                                                                 TAATATTCGAACCTCCGGAACCTGGAGCGCGAAAACCAATTCACCTTTTTTACCGTTTGACTGCTCGCAGATCATCTGGAACGACGCCCGCTCA              >  SRR4302543.6002102/1‑94 (MQ=60)
                                                                                  AATATTCGAACCTCCGGAACCTGGAGCGCGAAAACCAATTCACCTTTTTTACCGTTTGACTGCTCGCAGATCATCTGGAACGACGCCCGCTCAT             <  SRR4302543.5562031/94‑1 (MQ=60)
                                                                                  AATATTCGAACCTCCGGAACCTGGAGCGCGAAAACCAATTCACCTTTTTTACCGTTTGACTGCTCGCAGATCATCTGGAACGACGCCCGCTCAT             >  SRR4302543.2948367/1‑94 (MQ=60)
                                                                                  AATATTCGAACCTCCGGAACCTGGAGCGCGAAAACCAATTCACCTTTTTTACCGTTTGACTGCTCGCAGATCATCTGGAACGACGCCCGCTCAT             <  SRR4302543.6563864/94‑1 (MQ=60)
                                                                                  AATATTCGAACCTCCGGAACCTGGAGCGCGAAAACCAATTCACCTTTTTTACCGTTTGACTGCTCGCAGATCATCTGGAACGACGCCCGCTCAT             <  SRR4302543.5322200/94‑1 (MQ=60)
                                                                                  AATATTCGAACCTCCGGAACCTGGAGCGCGAAAACCAATTCACCTTTTTTACCGTTTGACTGCTCGCAGATCATCTGGAACGACGCCCGCTCAT             <  SRR4302543.3509495/94‑1 (MQ=60)
                                                                                  AATATTCGAACCTCCGGAACCTGGAGCGCGAAAACCAATTCACCTTTTTTACCGTTTGACTGCTCGCAGATCATCTGGAACGACGCCCGCTCAT             <  SRR4302543.6173362/94‑1 (MQ=60)
                                                                                   ATATTCGAACCTCCGGAACCTGGAGCGCGAAAACCAATTCACCTTTTTTACCGTTTGACTGCTCGCAGATCATCTGGAACGACGCCCGCTCATT            >  SRR4302543.408683/1‑94 (MQ=60)
                                                                                    TATTCGAACCTCCGGAACCTGGAGCGCGAAAACCAATTCACCTTTTTTACCGTTTGACTGCTCGCAGATCATCTGGAACGACGCCCGCTCATTG           <  SRR4302543.3324530/94‑1 (MQ=60)
                                                                                    TATTCGAACCTCCGGAACCTGGAGCGCGAAAACCAATTCACCTTTTTTACCGTTTGACTGCTCGCAGATCATCTGGAACGACGCCCGCTCATTG           <  SRR4302543.2092917/94‑1 (MQ=60)
                                                                                      TTCGAACCTCCGGAACCTGGAGCGCGAAAACCAATTCACCTTTTTTACCGTTTGACTGCTCGCAGATCATCTGGAACGACGCCCGCTCATTGCC         <  SRR4302543.6059780/94‑1 (MQ=60)
                                                                                      TTCGAACCTCCGGAACCTGGAGCGCGAAAACCAATTCACCTTTTTTACCGTTTGACTGCTCGCAGATCATCTGGAACGACGCCCGCTCATTGCC         >  SRR4302543.2938109/1‑94 (MQ=60)
                                                                                       TCGAACCTCCGGAACCTGGAGCGCGAAAACCAATTCACCTTTTTTACCGTTTGACTGCTCGCAGATCATCTGGAACGACGCCCGCTCATTGCCA        >  SRR4302543.508881/1‑94 (MQ=60)
                                                                                       TCGAACCTCCGGAACCTGGAGCGCGAAAACCAATTCACCTTTTTTACCGTTTGACTGCTCGCAGATCATCTGGAACGACGCCCGCTCATTGCCA        >  SRR4302543.7862977/1‑94 (MQ=60)
                                                                                        CGAACCTCCGGAACCTGGAGCGCGAAAACCAATTCACCTTTTTTACCGTTTGACTGCTCGCAGATCATCTGGAACGACGCCCGCTCATTGCCAT       <  SRR4302543.6848598/94‑1 (MQ=60)
                                                                                        CGAACCTCCGGAACCTGGAGCGCGAAAACCAATTCACCTTTTTTACCGTTTGACTGCTCGCAGATCATCTGGAACGACGCCCGCTCATTGCCAT       >  SRR4302543.2190571/1‑94 (MQ=60)
                                                                                        CGAACCTCCGGAACCTGGAGCGCGAAAACCAATTCACCTTTTTTACCGTTTGACTGCTCGCAGATCATCTGGAACGACGCCCGCTCATTGCCAT       <  SRR4302543.5938326/94‑1 (MQ=60)
                                                                                         GAACCTCCGGAACCTGGAGCGCGAAAACCAATTCACCTTTTTTACCGTTTGACTGCTCGCAGATCATCTGGAACGACGCCCGCTCATTGCCATT      >  SRR4302543.2911662/1‑94 (MQ=60)
                                                                                         GAACCTCCGGAACCTGGAGCGCGAAAACCAATTCACCTTTTTTACCGTTTGACTGCTCGCAGATCATCTGGAACGACGCCCGCTCATTGCCATA      >  SRR4302543.6419295/1‑94 (MQ=60)
                                                                                          AACCTCCGGAACCTGGAGCGCGAAAACCAATTCACCTTTTTTACCGCTTGACTGCTCGCAGATCATCTGGAACGACGCCCGCTCATTGCCATTA     >  SRR4302543.3439736/1‑94 (MQ=60)
                                                                                           ACCTCCGGAACCTGGAGCGCGAAAACCAATTCACCTTTTTTACCGTTTGACTGCTCGCAGATCATCTGGAACGACGCCCGCTCATTGCCATTAC    <  SRR4302543.3150686/94‑1 (MQ=60)
                                                                                           ACCTCCGGAACCTGGAGCGCGAAAACCAATTCACCTTTTTTACCGTTTGACTGCTCGCAGATCATCTGGAACGACGCCCGCTCATTGCCATTAC    <  SRR4302543.4162632/94‑1 (MQ=60)
                                                                                            CCTCCGGAACCTGGAGCGCGAAAACCAATTCACCTTTTTTACCGTTTGACTGCTCGCAGATCATCTGGAACGACGCCCGCTCATTGCCATTACC   >  SRR4302543.6941377/1‑94 (MQ=60)
                                                                                            CCTCCGGAACCTGGAGCGCGAAAACCAATTCACCTTTTTTACCGTTTGACTGCTCGCAGATCATCTGGAACGACGCCCGCTCATTGCCATTACC   <  SRR4302543.411193/94‑1 (MQ=60)
                                                                                            CCTCCGGAACCTGGAGCGCGAAAACCAATTCACCTTTTTTACCGTTTGACTGCTCGCAGATCATCTGGAACGACGCCCGCTCATTGCCATTACC   >  SRR4302543.7221380/1‑94 (MQ=60)
                                                                                            CCTCCGGAACCTGGAGCGCGAAAACCAATTCACCTTTTTTACCGTTTGACTGCTCGCAGATCATCTGGAACGACGCCCGCTCATTGCCATTACC   <  SRR4302543.7356665/94‑1 (MQ=60)
                                                                                            CCTCCGGAACCTGGAGCGCGAAAACCAATTCACCTTTTTTACCGTTTGACTGCTCGCAGATCATCTGGAACGACGCCCGCTCATTGCCATTACC   >  SRR4302543.3672840/1‑94 (MQ=60)
                                                                                             CTCCGGAACCTGGAGCGCGAAAACCAATTCACCTTTTTTACCGTTTGACTGCTCGCAGATCATCTGGAACGACGCCCGCTCATTGCCATTACCA  >  SRR4302543.7180102/1‑94 (MQ=60)
                                                                                             |                                                                                             
TGAAGCCACCAGCGTAAAACAACTGGCTGACGCTGGCGTGCGGGTAGGCGATACATTGCGTATTAGCGGTACGGGAATGTGTAATATTCGAACTTCCGGAACCTGGAGCGCGAAAACCAATTCACCTTTTTTACCGTTTGACTGCTCGCAGATCATCTGGAACGACGCCCGCTCATTGCCATTACCA  >  NC_000913/3525237‑3525423

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 17 ≤ ATCG/ATCG < 28 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑