Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A1 F1 I1 R1 1696 279.3 15874187 97.8% 15524954 93.0

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 3,556,990 G→A R364H (CGC→CAC)  rtcR → putative 2‑component regulator

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009133,556,9900GA99.7% 1124.4 / ‑5.6 317R364H (CGC→CAC) rtcRputative 2‑component regulator
Reads supporting (aligned to +/- strand):  ref base G (0/1);  new base A (159/156);  total (160/157)
Fisher's exact test for biased strand distribution p-value = 4.97e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 4.88e-01

Only 100 of 356 total aligned reads displayed.

TGCGCCAGCTGGTTGCCGAAGGCAAATTTCGCGAAGATCTGTACGCGCGGATCAATCTCTGGACCTTCACCCTGCCGGGTCTACGCCAGCGCCAGGAAGATATTGAACCGAACCTGGATTATGAAGTGGAGCGCCACGCCTCACTCACTGGCGACAGCGTGCGTTTTAACACCGAAGCGC  >  NC_000913/3556900‑3557079
                                                                                          |                                                                                         
tGCGCCAGCTGGTTGCCGAAGGCAAATTTCGCGAAGATCTGTACGCGCGGATCAATCTCTGGACCTTCACCCTGCCGGGTCTAcgccagcacc                                                                                         <  1:7464154/93‑1 (MQ=255)
tGCGCCAGCTGGTTGCCGAAGGCAAATTTCGCGAAGATCTGTACGCGCGGATCAATCCCTGGACCTTCACCCTGCCGGGTCTAcgccagcacc                                                                                         <  1:567956/93‑1 (MQ=255)
 gcgcCAGCTGGTTGCCGAAGGCAAATTTCGCGAAGATCTGTACGCGCGGATCAATCTCTGGACCTTCACCCTGCCGGGTCTAcgccagcacca                                                                                        <  1:6783630/93‑1 (MQ=255)
  cgcCAGCTGGTTGCCGAAGGCAAATTTCGCGAAGATCTGTACGCGCGGATCAATCTCTGGACCTTCACCCTGCCGGGTCTAcgccagcaccag                                                                                       <  2:7074598/93‑1 (MQ=255)
  cgcCAGCTGGTTGCCGAAGGCAAATTTCGCGAAGATCTGTACGCGCGGATCAATCTCTGGACCTTCACCCTGCCGGGTCTAcgccagcaccag                                                                                       <  2:6493634/93‑1 (MQ=255)
  cgcCAGCTGGTTGCCGAAGGCAAATTTCGCGAAGATCTGTACGCGCGGATCAATCTCTGGACCTTCACCCTGCCGGGTCTAcgccagcaccag                                                                                       <  1:5578025/93‑1 (MQ=255)
    ccAGCTGGTTGCCGAAGGCAAATTTCGCGAAGATCTGTACGCGCGGATCAATCTCTGGACCTTCACCCTGCCGGGTCTACGCCAGCACCAGGa                                                                                     <  1:3384991/93‑1 (MQ=255)
     cAGCTGGTTGCCGAAGGCAAATTTCGCGAAGATCTGTACGCGCGGATCAATCTCTGGACCTTCACCCTGCCGGGTCTACGCCAGCACCAGGaa                                                                                    <  2:5455304/93‑1 (MQ=255)
     cAGCTGGTTGCCGAAGGCAAATTTCGCGAAGATCTGTACGCGCGGATCAATCTCTGGACCTTCACCCTGCCGGGTCTACGCCAGCACCAGGaa                                                                                    <  2:1946240/93‑1 (MQ=255)
      aGCTGGTTGCCGAAGGCAAATTTCGCGAAGATCTGTACGCGCGGATCAATCTCTGGACCTTCACCCTGCCGGGTCTACGCCAGCACCAGGAAg                                                                                   <  2:7000123/93‑1 (MQ=255)
      aGCTGGTTGCCGAAGGCAAATTTCGCGAAGATCTGTACGCGCGGATCAATCTCTGGACCTTCACCCTGCCGGGTCTACGCCAGCACCAGGAAg                                                                                   >  2:318035/1‑93 (MQ=255)
       gCTGGTTGCCGAAGGCAAATTTCGCGAAGATCTGTACGCGCGGATCAATCTCTGGACCTTCACCCTGCCGGGTCTACGCCAGCACCAGGAAGa                                                                                  >  2:147823/1‑93 (MQ=255)
       gCTGGTTGCCGAAGGCAAATTTCGCGAAGATCTGTACGCGCGGATCAATCTCTGGACCTTCACCCTGCCGGGTCTACGCCAGCACCAGGAAGa                                                                                  <  1:3525718/93‑1 (MQ=255)
        cTGGTTGCCGAAGGCAAATTTCGCGAAGATCTGTACGCGCGGATCAATCTCTGGACCTTCACCCTGCCGGGTCTACGCCAGCACCAGGAAGat                                                                                 >  1:5761998/1‑93 (MQ=255)
         tGGTTGCCGAAGGCAAATTTCGCGAAGATCTGTACGCGCGGATCAATCTCTGGACCTTCACCCTGCCGGGTCTACGCCAGCACCAGGAAGata                                                                                >  2:3347247/1‑93 (MQ=255)
          ggTTGCCGAAGGCAAATTTCGCGAAGATCTGTACGCGCGGATCAATCTCTGGACCTTCACCCTGCCGGGTCTACGCCAGCACCAGGAAGatat                                                                               <  2:2664208/93‑1 (MQ=255)
             tGCCGAAGGCAAATTTCGCGAAGATCTGTACGCGCGGATCAATCTCTGGACCTTCACCCTGCCGGGTCTACGCCAGCACCAGGAAGATATTga                                                                            <  2:5230388/93‑1 (MQ=255)
             tGCCGAAGGCAAATTTCGCGAAGATCTGTACGCGCGGATCAATCTCTGGACCTTCACCCTGCCGGGTCTACGCCAGCACCAGGAAGATATTga                                                                            <  1:6249960/93‑1 (MQ=255)
               ccGAAGGCAAATTTCGCGAAGATCTGTACGCGCGGATCAATCTCTGGACCTTCACCCTGCCGGGTCTACGCCAGCACCAGGAAGATATTgaac                                                                          >  1:1842573/1‑93 (MQ=255)
                cGAAGGCAAATTTCGCGAAGATCTGTACGCGCGGATCAATCTCTGGACCTTCACCCTGCCGGGTCTACGCCAGCACCAGGAAGATATTgaacc                                                                         <  1:2090172/93‑1 (MQ=255)
                 gAAGGCAAATTTCGCGAAGATCTGTACGCGCGGATCAATCTCTGGACCTTCACCCTGCCGGGTCTACGCCAGCACCAGGAAGATATTgaaccg                                                                        >  2:4845461/1‑93 (MQ=255)
                  aaGGCAAATTTCGCGAAGATCTGTACGCGCGGATCAATCTCTGGACCTTCACCCTGCCGGGTCTACGCCAGCACCAGGAAGATATTgaaccga                                                                       <  1:6968147/93‑1 (MQ=255)
                    ggCAAATTTCGCGAAGATCTGTACGCGCGGATCAATCTCTGGACCTTCACCCTGCCGGGTCTACGCCAGCACCAGGAAGATATTgaaccgaac                                                                     >  2:3271120/1‑93 (MQ=255)
                    ggCAAATTTCGCGAAGATCTGTACGCGCGGATCAATCTCTGGACCTTCACCCTGCCGGGTCTACGCCAGCACCAGGAAGATATTgaaccgaac                                                                     >  1:2430321/1‑93 (MQ=255)
                    ggCAAATTTCGCGAAGATCTGTACGCGCGGATCAATCTCTGGACCTTCACCCTGCCGGGTCTACGCCAGCACCAGGAAGATATTgaaccgaac                                                                     >  1:782603/1‑93 (MQ=255)
                     gCAAATTTCGCGAAGATCTGTACGCGCGGATCAATCTCTGGACCTTCACCCTGCCGGGTCTACGCCAGCACCAGGAAGATATTgaaccgaacc                                                                    <  1:6303556/93‑1 (MQ=255)
                     gCAAATTTCGCGAAGATCTGTACGCGCGGATCAATCTCTGGACCTTCACCCTGCCGGGTCTACGCCAGCACCAGGAAGATATTgaaccgaacc                                                                    >  1:6134125/1‑93 (MQ=255)
                      cAAATTTCGCGAAGATCTGTACGCGCGGATCAATCTCTGGACCTTCACCCTGCCGGGTCTACGCCAGCACCAGGAAGATATTGAACCGAACCt                                                                   <  2:2409171/93‑1 (MQ=255)
                       aaaTTTCGCGAAGATCTGTACGCGCGGATCAATCTCTGGACCTTCACCCTGCCGGGTCTACGCCAGCACCAGGAAGATATTGAACCGAACCTg                                                                  <  2:6306122/93‑1 (MQ=255)
                       aaaTTTCGCGAAGATCTGTACGCGCGGATCAATCTCTGGACCTTCACCCTGCCGGGTCTACGCCAGCACCAGGAAGATATTGAACCGAACCTg                                                                  <  1:1175187/93‑1 (MQ=255)
                        aaTTTCGCGAAGATCTGTACGCGCGGATCAATCTCTGGACCTTCACCCTGCCGGGTCTACGCCAGCACCAGGAAGATATTGAACCGAACCTgg                                                                 >  2:474872/1‑93 (MQ=255)
                         aTTTCGCGAAGATCTGTACGCGCGGATCAATCTCTGGACCTTCACCCTGCCGGGTCTACGCCAGCACCAGGAAGATATTGAACCGAACCTGGa                                                                <  2:85656/93‑1 (MQ=255)
                          tttCGCGAAGATCTGTACGCGCGGATCAATCTCTGGACCTTCACCCTGCCGGGTCTACGCCAGTACCAGGAAGATATTGAACCGAACCTGGAt                                                               >  2:3623491/1‑93 (MQ=255)
                            tCGCGAAGATCTGTACGCGCGGATCAATCTCTGGACCTTCACCCTGCCGGGTCTACGCCAGCACCAGGAAGATATTGAACCGAACCTGGATTa                                                             >  1:1507527/1‑93 (MQ=255)
                             ggtgAAGATCTGTACGCGCGGATCAATCTCTGGACCTTCACCCTGCCGGGTCTACGCCAGCACCAGGAAGATATTGAACCGAACCTGGATTAt                                                            >  2:7137373/4‑93 (MQ=255)
                             cgcgAAGATCTGTACGCGCGGATCAATCTCTGGACCTTCACCCTGCCGGGTCTACGCCAGCACCAGGAAGATATTGAACCGAACCTGGATTAt                                                            <  1:7643915/93‑1 (MQ=255)
                              gcgAAGATCTGTACGCGCGGATCAATCTCTGGACCTTCACCCTGCCGGGTCTACGCCAGCACCAGGAAGATATTGAACCGAACCTGGATTATg                                                           <  1:5430541/93‑1 (MQ=255)
                              gcgAAGATCTGTACGCGCGGATCAATCTCTGGACCTTCACCCTGCCGGGTCTACGCCAGCACCAGGAAGATATTGAACCGAACCTGGATTATg                                                           >  2:1516637/1‑93 (MQ=255)
                                gAAGATCTGTACGCGCGGATCAATCTCTGGACCTTCACCCTGCCGGGTCTACGCCAGCACCAGGAAGATATTGAACCGAACCTGGATTATGaa                                                         >  2:4065897/1‑93 (MQ=255)
                                gAAGATCTGTACGCGCGGATCAATCTCTGGACCTTCACCCTGCCGGGTCTACGCCAGCACCAGGAAGATATTGAACCGAACCTGGATTATGaa                                                         >  2:5867240/1‑93 (MQ=255)
                                 aaGATCTGTACGCGCGGATCAATCTCTGGACCTTCACCCTGCCGGGTCTACGCCAGCACCAGGAAGATATTGAACCGAACCTGGATTATGAAg                                                        >  2:6892421/1‑93 (MQ=255)
                                 aaGATCTGTACGCGCGGATCAATCTCTGGACCTTCACCCTGCCGGGTCTACGCCAGCACCAGGAAGATATTGAACCGAACCTGGATTATGAAg                                                        >  2:2097832/1‑93 (MQ=255)
                                 aaGATCTGTACGCGCGGATCAATCTCTGGACCTTCACCCTGCCGGGTCTACGCCAGCACCAGGAAGATATTGAACCGAACCTGGATTATGAAg                                                        <  1:5869628/93‑1 (MQ=255)
                                 aaGATCTGTACGCGCGGATCAATCTCTGGACCTTCACCCTGCCGGGTCTACGCCAGCACCAGGAAGATATTGAACCGAACCTGGATTATGAAg                                                        <  2:512156/93‑1 (MQ=255)
                                 aaGATCTGTACGCGCGGATCAATCTCTGGACCTTCACCCTGCCGGGTCTACGCCAGCACCAGGAAGATATTGAACCGAACCTGGATTATGAAg                                                        <  2:68571/93‑1 (MQ=255)
                                  aGATCTGTACGCGCGGATCAATCTCTGGACCTTCACCCTGCCGGGTCTACGCCAGCACCAGGAAGATATTGAACCGAACCTGGATTATGAAGt                                                       >  1:2567622/1‑93 (MQ=255)
                                   gATCTGTACGCGCGGATCAATCTCTGGACCTTCACCCTGCCGGGTCTACGCCAGCACCAGGAAGATATTGAACCGAACCTGGATTATGAAGTg                                                      >  1:45118/1‑93 (MQ=255)
                                   gATCTGTACGCGCGGATCAATCTCTGGACCTTCACCCTGCCGGGTCTACGCCAGCACCAGGAAGATATTGAACCGAACCTGGATTATGAAGTg                                                      >  2:30618/1‑93 (MQ=255)
                                    aTCTGTACGCGCGGATCAATCTCTGGACCTTCACCCTGCCGGGTCTACGCCAGCACCAGGAAGATATTGAACCGAACCTGGATTATGAAGTgg                                                     >  2:1877782/1‑93 (MQ=255)
                                     tCTGTACGCGCGGATCAATCTCTGGACCTTCACCCTGCCGGGTCTACGCCAGCACCAGGAAGATATTGAACCGAACCTGGATTATGAAGTGGa                                                    <  1:6867054/93‑1 (MQ=255)
                                       tGTACGCGCGGATCAATCTCTGGACCTTCACCCTGCCGGGTCTACGCCAGCACCAGGAAGATATTGAACCGAACCTGGATTATGAAGTGGAgc                                                  <  2:7430771/93‑1 (MQ=255)
                                       tGTACGCGCGGATCAATCTCTGGACCTTCACCCTGCCGGGTCTACGCCAGCACCAGGAAGATATTGAACCGAACCTGGATTATGAAGTGGAgc                                                  >  1:7658713/1‑93 (MQ=255)
                                        gTACGCGCGGATCAATCTCTGGACCTTCACCCTGCCGGGTCTACGCCAGCACCAGGAAGATATTGAACCGAACCTGGATTATGAAGTGGAgcg                                                 >  1:1328350/1‑93 (MQ=255)
                                        gTACGCGCGGATCAATCTCTGGACCTTCACCCTGCCGGGTCTACGCCAGCACCAGGAAGATATTGAACCGAACCTGGATTATGAAGTGGAgcg                                                 <  2:2311356/93‑1 (MQ=255)
                                           cgcgcgGATCAATCTCTGGACCTTCACCCTGCCGGGTCTACGCCAGCACCAGGAAGATATTGAACCGAACCTGGATTATGAAGTGGAGCGCCa                                              <  2:3412485/93‑1 (MQ=255)
                                            gcgcgGATCAATCTCTGGACCTTCACCCTGCCGGGTCTACGCCAGCACCAGGAAGATATTGAACCGAACCTGGATTATGAAGTGGAGCGCCAc                                             <  2:7377194/93‑1 (MQ=255)
                                            gcgcgGATCAATCTCTGGACCTTCACCCTGCCGGGTCTACGCCAGCACCAGGAAGATATTGAACCGAACCTGGATTATGAAGTGGAGCGCCAc                                             >  1:4711534/1‑93 (MQ=255)
                                              gcgGATCAATCTCTGGACCTTCACCCTGCCGGGTCTACGCCAGCACCAGGAAGATATTGAACCGAACCTGGATTATGAAGTGGAGCGCCACGc                                           >  1:5654651/1‑93 (MQ=255)
                                                 gATCAATCTCTGGACCTTCACCCTGCCGGGTCTACGCCAGCACCAGGAAGATATTGAACCGAACCTGGATTATGAAGTGGAGCGCCACGCctc                                        >  1:6632381/1‑93 (MQ=255)
                                                  aTCAATCTCTGGACCTTCACCCTGCCGGGTCTACGCCAGCACCAGGAAGATATTGAACCGAACCTGGATTATGAAGTGGAGCGCCACGCctca                                       >  1:7348007/1‑93 (MQ=255)
                                                   tCAATCTCTGGACCTTCACCCTGCCGGGTCTACGCCAGCACCAGGAAGATATTGAACCGAACCTGGATTATGAAGTGGAGCGCCACGCctcac                                      >  1:5209676/1‑93 (MQ=255)
                                                     aaTCTCTGGACCTTCACCCTGCCGGGTCTACGCCAGCACCAGGAAGATATTGAACCGAACCTGGATTATGAAGTGGAGCGCCACGCctcactc                                    >  2:5387220/1‑93 (MQ=255)
                                                      aTCTCTGGACCTTCACCCTGCCGGGTCTACGCCAGCACCAGGAAGATATTGAACCGAACCTGGATTATGAAGTGGAGCGCCACGCctcactca                                   <  2:6690018/93‑1 (MQ=255)
                                                      aTCTCTGGACCTTCACCCTGCCGGGTCTACGCCAGCACCAGGAAGATATTGAACCGAACCTGGATTATGAAGTGGAGCGCCACGCctcactca                                   <  1:7137374/93‑1 (MQ=255)
                                                       tctcTGGACCTTCACCCTGCCGGGTCTACGCCAGCACCAGGAAGATATTGAACCGAACCTGGATTATGAAGTGGAGCGCCACGCCtcactcac                                  >  2:6655466/1‑93 (MQ=255)
                                                       tctcTGGACCTTCACCCTGCCGGGTCTACGCCAGCACCAGGAAGATATTGAACCGAACCTGGATTATGAAGTGGAGCGCCACGCCtcactcac                                  >  1:2010094/1‑93 (MQ=255)
                                                       tctcTGGACCTTCACCCTGCCGGGTCTACGCCAGCACCAGGAAGATATTGAACCGAACCTGGATTATGAAGTGGAGCGCCACGCCtcactcac                                  <  1:287579/93‑1 (MQ=255)
                                                       tctcTGGACCTTCACCCTGCCGGGTCTACGCCAGCACCAGGAAGATATTGAACCGAACCTGGATTATGAAGTGGAGCGCCACGCCtcactcac                                  <  2:4263143/93‑1 (MQ=255)
                                                       tctcTGGACCTTCACCCTGCCGGGTCTACGCCAGCACCAGGAAGATATTGAACCGAACCTGGATTATGAAGTGGAGCGCCACGCCtcactcac                                  <  2:7774078/93‑1 (MQ=255)
                                                        ctctGGACCTTCACCCTGCCGGGTCTACGCCAGCACCAGGAAGATATTGAACCGAACCTGGATTATGAAGTGGAGCGCCACGCCTcactcact                                 <  1:2716529/93‑1 (MQ=255)
                                                        ctctGGACCTTCACCCTGCCGGGTCTACGCCAGCACCAGGAAGATATTGAACCGAACCTGGATTATGAAGTGGAGCGCCACGCCTcactcact                                 <  2:1377760/93‑1 (MQ=255)
                                                           tGGACCTTCACCCTGCCGGGTCTACGCCAGCACCAGGAAGATATTGAACCGAACCTGGATTATGAAGTGGAGCGCCACGCCTCACTCACTGGc                              <  2:5918107/93‑1 (MQ=255)
                                                            ggACCTTCACCCTGCCGGGTCTACGCCAGCACCAGGAAGATATTGAACCGAACCTGGATTATGAAGTGGAGCGCCACGCCTCACTCACTGGCg                             >  1:4266605/1‑93 (MQ=255)
                                                             gACCTTCACCCTGCCGGGTCTACGCCAGCACCAGGAAGATATTGAACCGAACCTGGATTATGAAGTGGAGCGCCACGCCTCACTCACTcgcgc                            >  2:2859531/1‑92 (MQ=255)
                                                               ccTTCACCCTGCCGGGTCTACGCCAGCACCAGGAAGATATTGAACCGAACCTGGATTATGAAGTGGAGCGCCACGCCTCACTCACTGGCGACa                          >  1:926340/1‑93 (MQ=255)
                                                                cTTCACCCTGCCGGGTCTACGCCAGCACCAGGAAGATATTGAACCGAACCTGGCTTATGAAGTGGAGCGCCAGGCCCCACTGACTGGCGagac                         >  2:6571699/1‑90 (MQ=255)
                                                                cTTCACCCTGCCGGGTCTACGCCAGCACCAGGAAGATATTGAACCGAACCTGGATTATGAAGTGGAGCGCCACGCCTCACTCACTGGCGACAg                         <  2:1072075/93‑1 (MQ=255)
                                                                cTTCACCCTGCCGGGTCTACGCCAGCACCAGGAAGATATTGAACCGAACCTGGATTATGAAGTGGAGCGCCACGCCTCACTCACTGGCGACAg                         >  1:1771497/1‑93 (MQ=255)
                                                                  tCACCCTGCCGGGTCTACGCCAGCACCAGGAAGATATTGAACCGAACCTGGATTATGAAGTGGAGCGCCACGCCTCACTCACTGGCGACAgcg                       >  2:5743157/1‑93 (MQ=255)
                                                                   cACCCTGCCGGGTCTACGCCAGCACCAGGAAGATATTGAACCGAACCTGGATTATGAAGTGGAGCGCCACGCCTCACTCACTGGCGACAgcgt                      <  1:6398945/93‑1 (MQ=255)
                                                                     cccTGCCGGGTCTACGCCAGCACCAGGAAGATATTGAACCGAACCTGGATTATGAAGTGGTGCGCCACGCCTCACTCACTGGCGACAgcgtgc                    >  1:4933828/1‑93 (MQ=255)
                                                                     cccTGCCGGGTCTACGCCAGCACCAGGAAGATATTGAACCGAACCTGGATTATGAAGTGGAGCGCCACGCCTCACTCACTGGCGACAgcgtgc                    <  2:6212079/93‑1 (MQ=255)
                                                                       cTGCCGGGTCTACGCCAGCACCAGGAAGATATTGAACCGAACCTGGATTATGAAGTGGAGCGCCACGCCTCACTCACTGGCGACAgcgtgcgt                  >  1:7696912/1‑93 (MQ=255)
                                                                       cTGCCGGGTCTACGCCAGCACCAGGAAGATATTGAACCGAACCTGGATTATGAAGTGGAGCGCCACGCCTCACTCACTGGCGACAgcgtgcgt                  >  2:1682365/1‑93 (MQ=255)
                                                                        tGCCGGGTCTACGCCAGCACCAGGAAGATATTGAACCGAACCTGGATTATGAAGTGGAGCGCCACGCCTCACTCACTGGCGACAGCGTGCGtt                 >  1:3673087/1‑93 (MQ=255)
                                                                        tGCCGGGTCTACGCCAGCACCAGGAAGATATTGAACCGAACCTGGATTATGAAGTGGAGCGACACGCCTCACTCACTGGCGACAGCGTGCGtt                 >  1:2811021/1‑93 (MQ=255)
                                                                            gggTCTACGCCAGCACCAGGAAGATATTGAACCGAACCTGGATTATGAAGTGGAGCGCCCCGCCTCACTCACTGGCGACAGCGTGCGTTTTaa             >  1:1026617/1‑93 (MQ=255)
                                                                            gggTCTACGCCAGCACCAGGAAGATATTGAACCGAACCTGGATTATGAAGTGGAGCGCCACGCCTCACTCACTGGCGACAGCGTGCGTTTTaa             <  1:3896919/93‑1 (MQ=255)
                                                                             ggTCTACGCCAGCACCAGGAAGATATTGAACCGAACCTGGATTATGAAGTGGAGCGCCACGCCTCACTCACTGGCGACAGCGTGCGTTTTAac            <  1:7030927/93‑1 (MQ=255)
                                                                             ggTCTACGCCAGCACCAGGAAGATATTGAACCGAACCTGGATTATGAAGTGGAGCGCCACGCCTCACTCACTGGCGACAGCGTGCGTTTTAac            <  1:5116916/93‑1 (MQ=255)
                                                                              gTCTACGCCAGCACCAGGAAGATATTGAACCGAACCTGGATTATGAAGTGGAGCGCCACGCCTCACTCACTGGCGACAGCGTGCGTTTTAaca           <  1:1533532/93‑1 (MQ=255)
                                                                               tCTACGCCAGCACCAGGAAGATATTGAACCGAACCTGGATTATGAAGTGGAGCGCCACGCCTCACTCACTGGCGACAGCGTGCGTTTTAacac          >  2:455946/1‑93 (MQ=255)
                                                                               tCTACGCCAGCACCAGGAAGATATTGAACCGAACCTGGATTATGAAGTGGAGCGCCACGCCTCACTCACTGGCGACAGCGTGCGGTTTAacac          >  1:2937880/1‑93 (MQ=255)
                                                                                cTACGCCAGCACCAGGAAGATATTGAACCGAACCTGGATTATGAAGTGGAGCGCCACGCCTCACTCACTGGCGACAGCGTGCGTTTTAACAcc         <  2:3948996/93‑1 (MQ=255)
                                                                                    gccagcaccagGAAGATATTGAACCGAACCTGGATTATGAAGTGGAGCGCCACGCCTCACTCACTGGCGACAGCGTGCGTTTTAACACCGAAg     <  1:1422859/93‑1 (MQ=255)
                                                                                    gccagcaccagGAAGATATTGAACCGAACCTGGATTATGAAGTGGAGCGCCACGCCTCACTCACTGGCGACAGCGTGCGTTTTAACACCGAAg     <  2:7869920/93‑1 (MQ=255)
                                                                                     ccagcaccagGAAGATATTGAACCGAACCTGGATTATGAAGTGGAGCGCCACGCCTCACTCACTGGCGACAGCGTGCGTTTTAACACCGAAgc    <  2:6160306/93‑1 (MQ=255)
                                                                                     ccagcaccagGAAGATATTGAACCGAACCTGGATTATGAAGTGGAGCGCCACGCCTCACTCACTGGCGACAGCGTGCGTTTTAACACCGAAgc    >  2:173322/1‑93 (MQ=255)
                                                                                     ccagcaccagGAAGATATTGAACCGAACCTGGATTATGAAGTGGAGCGCCACGCCTCACTCACTGGCGACAGCGTGCGTTTTAACACCGAAgc    <  2:3754117/93‑1 (MQ=255)
                                                                                       agcaccagGAAGATATTGAACCGAACCTGGATTATGAAGTGGAGCGCCACGCCTCACTCACTGGCGACAGCGTGCGTTTTAACACCGAAgcgc  <  1:2144746/93‑1 (MQ=255)
                                                                                          |                                                                                         
TGCGCCAGCTGGTTGCCGAAGGCAAATTTCGCGAAGATCTGTACGCGCGGATCAATCTCTGGACCTTCACCCTGCCGGGTCTACGCCAGCGCCAGGAAGATATTGAACCGAACCTGGATTATGAAGTGGAGCGCCACGCCTCACTCACTGGCGACAGCGTGCGTTTTAACACCGAAGCGC  >  NC_000913/3556900‑3557079

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

BRESEQ :: bam2aln output
ATTTGCGCCAGCTGGTTGCCGAAGGCAAATTTCGCGAAGATCTGTACGCGCGGATCAATCTCTGGACCTTCACCCTGCCGGGTCTACGCCAGCGCCAGGAAGATATTGAACCGAACCTGGATTATGAAGTGGAGCGCCACGCCTCACTCACTGGCGACAGCGTGCGTTTTAACACCGAAGCGCGGCG  >  NC_000913/3556897‑3557083
                                                                                             |                                                                                             
ATTTGCGCCAGCTGGTTGCCGAAGGCAAATTTCGCGAAGATCTGTACGCGCGGATCAATCTCTGGACCTTCCCCCTGCCGGGTCTACGCCAGCA                                                                                               <  SRR4302543.2504665/94‑1 (MQ=60)
ATTTGCGCCAGCTGGTTGCCGAAGGCAAATTTCGCGAAGATCTGTACGCGCGGATCAATCTCTGGACCTTCACCCTGCCGGGTCTACGCCAGCA                                                                                               <  SRR4302543.1987666/94‑1 (MQ=60)
 TTTGCGCCAGCTGGTTGCCGAAGGCAAATTTCGCGAAGATCTGTACGCGCGGATCAATCTCTGGACCTTCACCCTGCCGGGTCTACGCCAGCAC                                                                                              <  SRR4302543.336533/94‑1 (MQ=60)
   TGCGCCAGCTGGTTGCCGAAGGCAAATTTCGCGAAGATCTGTACGCGCGGATCAATCTCTGGACCTTCACCCTGCCGGGTCTACGCCAGCACCA                                                                                            <  SRR4302543.7535658/94‑1 (MQ=60)
   TGCGCCAGCTGGTTGCCGAAGGCAAATTTCGCGAAGATCTGTACGCGCGGATCAATCCCTGGACCTTCACCCTGCCGGGTCTACGCCAGCACCA                                                                                            <  SRR4302543.573152/94‑1 (MQ=60)
    GCGCCAGCTGGTTGCCGAAGGCAAATTTCGCGAAGATCTGTACGCGCGGATCAATCTCTGGACCTTCACCCTGCCGGGTCTACGCCAGCACCAG                                                                                           <  SRR4302543.2632955/94‑1 (MQ=60)
    GCGCCAGCTGGTTGCCGAAGGCAAATTTCGCGAAGATCTGTACGCGCGGATCAATCTCTGGACCTTCACCCTGCCGGGTCTACGCCAGCACCAG                                                                                           <  SRR4302543.534208/94‑1 (MQ=60)
    GCGCCAGCTGGTTGCCGAAGGCAAATTTCGCGAAGATCTGTACGCGCGGATCAATCTCTGGACCTTCACCCTGCCGGGTCTACGCCAGCACCAG                                                                                           <  SRR4302543.6847694/94‑1 (MQ=60)
    GCGCCAGCTGGTTGCCGAAGGCAAATTTCGCGAAGAGCTGTACGCGCGGATCAATCTCTCGACCTTCACCCTGCCGGGTCTACGCCAGCACCAG                                                                                           <  SRR4302543.534207/94‑1 (MQ=60)
     CGCCAGCTGGTTGCCGAAGGCAAATTTCGCGAAGATCTGTACGCGCGGATCAATCTCTGGACCTTCACCCTGCCGGGTCTACGCCAGCACCAGG                                                                                          <  SRR4302543.5628803/94‑1 (MQ=60)
      GCCAGCTGGTTGCCGAAGGCAAATTTCGCGAAGATCTGTACGCGCGGATCAATCTCTGGACCTTCACCCTGCCGGGTCTACGCCAGCACCAGGA                                                                                         >  SRR4302543.3455162/1‑94 (MQ=60)
       CCAGCTGGTTGCCGAAGGCAAATTTCGCGAAGATCTGTACGCGCGGATCAATCTCTGGACCTTCACCCTGCCGGGTCTACGCCAGCACCAGGAA                                                                                        <  SRR4302543.3415346/94‑1 (MQ=60)
        CAGCTGGTTGCCGAAGGCAAATTTCGCGAAGATCTGTACGCGCGGATCAATCTCTGGACCTTCCCCCTGCCGGGTCTACGCCAGCACCAGGAAG                                                                                       <  SRR4302543.2801534/94‑1 (MQ=60)
         AGCTGGTTGCCGAAGGCAAATTTCGCGAAGATCTGTACGCGCGGATCAATCTCTGGACCTTCACCCTGCCGGGTCTACGCCAGCACCAGGAAGA                                                                                      <  SRR4302543.2154288/94‑1 (MQ=60)
         AGCTGGTTGCCGAAGGCAAATTTCGCGAAGATCTGTACGCGCGGATCAATCTCTGGACCTTCACCCTGCCGGGTCTACGCCAGCACCAGGAAGA                                                                                      >  SRR4302543.5712785/1‑94 (MQ=60)
          GCTGGTTGCCGAAGGCAAATTTCGCGAAGATCTGTACGCGCGGATCAATCTCTGGACCTTCACCCTGCCGGGTCTACGCCAGCACCAGGAAGAT                                                                                     <  SRR4302543.7017712/94‑1 (MQ=60)
          GCTGGTTGCCGAAGGCAAATTTCGCGAAGATCTGTACGCGCGGATCAATCTCTGGACCTTCACCCTGCCGGGTCTACGCCAGCACCAGGAAGAT                                                                                     <  SRR4302543.3557149/94‑1 (MQ=60)
          GCTGGTTGCCGAAGGCAAATTTCGCGAAGATCTGTACGCGCGGATCAATCTCTGGACCTTCACCCTGCCGGGTCTACGCCAGCACCAGGAAGAT                                                                                     <  SRR4302543.1672110/94‑1 (MQ=60)
          GCTGGTTGCCGAAGGCAAATTTCGCGAAGATCTGTACGCGCGGATCAATCTCTGGACCTTCACCCTGCCGGGTCTACGCCAGCACCAGGAAGAT                                                                                     >  SRR4302543.5814488/1‑94 (MQ=60)
           CTGGTTGCCGAAGGCAAATTTCGCGAAGATCTGTACGCGCGGATCAATCTCTGGACCTTCACCCTGCCGGGTCTACGCCAGCACCAGGAAGATG                                                                                    >  SRR4302543.2219260/1‑94 (MQ=60)
           CTGGTTGCCGAAGGCAAATTTCGCGAAGATCTGTACGCGCGGATCAATCTCTGGACCTTCACCCTGCCGGGTCTACGCCAGCACCAGGAAGATA                                                                                    >  SRR4302543.773556/1‑94 (MQ=60)
           CTGGTTGCCGAAGGCAAATTTCGCGAAGATCTGTACGCGCGGATCAATCTCTGGACCTTCACCCTGCCGGGTCTACGCCAGCACCAGGAAGATA                                                                                    >  SRR4302543.1231963/1‑94 (MQ=60)
           CTGGTTGCCGAAGGCAAATTTCGCGAAGATCTGTACGCGCGGATCAATCTCTGGACCTTCACCCTGCCGGGTCTACGCCAGCACCAGGAAGATA                                                                                    >  SRR4302543.4373039/1‑94 (MQ=60)
           CTGGTTGCCGAAGGCAAATTTCGCGAAGATCTGTACGCGCGGATCAATCTCTGGACCTTCACCCTGCCGGGTCTACGCCAGCACCAGGAAGATA                                                                                    <  SRR4302543.1590624/94‑1 (MQ=60)
            TGGTTGCCGAAGGCAAATTTCGCGAAGATCTGTACGCGCGGATCAATCTCTGGACCTTCACCCTGCCGGGTCTACGCCAGCACCAGGAAGATAT                                                                                   <  SRR4302543.5106604/94‑1 (MQ=60)
            TGGTTGCCGAAGGCAAATTTCGCGAAGATCCGTACGCGCGGATCAATCTCTGGACCTTCACCCTGCCGGGTCTACGCCAGCACCAGGAAGATAT                                                                                   >  SRR4302543.7118868/1‑94 (MQ=60)
             GGTTGCCGAAGGCAAATTTCGCGAAGATCTGTACGCGCGGATCAATCTCTGGACCTTCACCCTGCCGGGTCTACGCCAGCACCAGGAAGATATT                                                                                  >  SRR4302543.1155969/1‑94 (MQ=60)
             GGTTGCCGAAGGCAAATTTCGCGAAGATCTGTACGCGCGGATCAATCTCTGGACCTTCACCCTGCCGGGTCTACGCCAGCACCAGGAAGATATT                                                                                  <  SRR4302543.707261/94‑1 (MQ=60)
                TGCCGAAGGCAAATTTCGCGAAGATCTGTACGCGCGGATCAATCTCTGGACCTTCACCCTGCCGGGTCTACGCCAGCACCAGGAAGATATTGAA                                                                               <  SRR4302543.6308914/94‑1 (MQ=60)
                TGCCGAAGGCAAATTTCGCGAAGATCTGTACGCGCGGATCAATCTCTGGACCTTCACCCTGCCGGGTCTACGCCAGCACCAGGAAGATATTGAA                                                                               <  SRR4302543.5150949/94‑1 (MQ=60)
                 GCCGAAGGCAAATTTCGCGAAGATCTGTACGCGCGGATCAATCTCTGGACCTTCACCCTGCCGGGTCTACGCCAGCACCAGGAAGATATTGAAC                                                                              >  SRR4302543.1859147/1‑94 (MQ=60)
                 GCCGAAGGCAAATTTCGCGAAGATCTGTACGCGCGGATCAATCTCTGGACCTTCACCCTGCCGGGTCTACGCCAGCACCAGGAAGATATTGAAC                                                                              <  SRR4302543.4544945/94‑1 (MQ=60)
                  CCGAAGNCAAATTTCGCGAAGNTCTGTACGCGCGGATCAATCTCTGGACCTTCACCCTGCCGGGTCTACGCCAGCACCAGGAAGATATTGAACC                                                                             <  SRR4302543.330116/94‑1 (MQ=60)
                  CCGAAGGCAAATTTCGCGAAGATCTGTACGCGCGGATCAATCTCTGGACCTTCACCCTGCCGGGTCTACGCCAGCACCAGGAAGATATTGAACC                                                                             >  SRR4302543.1354014/1‑94 (MQ=60)
                   CGAAGGCAAATTTCGCGAAGATCTGTACGCGCGGATCAATCTCTGGACCTTCACCCTGCCGGGTCTACGCCAGCACCAGGAAGATATTGAACCG                                                                            >  SRR4302543.574557/1‑94 (MQ=60)
                   CGAAGGCAAATTTCGCGAAGATCTGTACGCGCGGATCAATCTCTGGACCTTCACCCTGCCGGGTCTACGCCAGCACCAGGAAGATATTGAACCG                                                                            <  SRR4302543.2108845/94‑1 (MQ=60)
                     AAGGCAAATTTCGCGAAGATCTGTACGCGCGGATCAATCTCTGGACCTTCACCCTGCCGGGTCTACGCCAGCACCAGGAAGATATTGAACCGAA                                                                          <  SRR4302543.7033719/94‑1 (MQ=60)
                      AGGCAAATTTCGCGAAGATCTGTACGCGCGGATCAATCTCTGGACCTTCACCCTGCCGGGTCTACGCCAGCACCAGGAAGATATTGAACCGAAC                                                                         >  SRR4302543.6263288/1‑94 (MQ=60)
                      AGGCAAATTTCGCGAAGATCTGTACGCGCGGATCAATCTCTGGACCTTCACCCTGCCGGGTCTACGCCAGCACCAGGAAGATATTGAACCGAAC                                                                         <  SRR4302543.5695758/94‑1 (MQ=60)
                      AGGCAAATTTCGCGAAGATCTGTACGCGCGGATCAATCTCTGGACCTTCACCCTGCCGGGTCTACGCCAGCACCAGGAAGATATTGAACCGAAC                                                                         >  SRR4302543.2452252/1‑94 (MQ=60)
                      AGGCAAATTTCGCGAAGATCTGTACGCGCGGATCAATCTCTGGACCTTCACCCTGCCGGGTCTACGCCAGCACCAGGAAGATATTGAACCGAAC                                                                         >  SRR4302543.789490/1‑94 (MQ=60)
                       GGCAAATTTCGCGAAGATCTGTACGCGCGGATCAATCTCTGGACCTTCACCCTGCCGGGTCTACGCCAGCACCAGGAAGATATTGAACCGAACC                                                                        >  SRR4302543.7504522/1‑94 (MQ=60)
                       GGCAAATTTCGCGAAGATCTGTACGCGCGGATCAATCTCTGGACCTTCACCCTGCCGGGTCTACGCCAGCACCAGGAAGATATTGAACCGAACC                                                                        >  SRR4302543.6192232/1‑94 (MQ=60)
                       GGCAAATGTCGCGAAGATCTGTACGCGCGGATCAATCTCTGGACCTTCACCCTGCCGGGTCTACGCCAGCACCAGGAAGATATTGAACCGAACC                                                                        <  SRR4302543.1437446/94‑1 (MQ=60)
                        GCAAATTTCGCGAAGATCTGTACGCGCGGATCAATCTCTGGACCTTCACCCTGCCGGGTCTACGCCAGCACCAGGAAGATATTGAACCGAACCT                                                                       <  SRR4302543.6362858/94‑1 (MQ=60)
                        GCAAATTTCGCGAAGATCTGTACGCGCGGATCAATCTCTGGACCTTCACCCTGCCGGGTCTACGCCAGCACCAGGAAGATATTGAACCGAACCT                                                                       <  SRR4302543.2622619/94‑1 (MQ=60)
                        GCAAATTTCGCGAAGATCTGTACGCGCGGATCAATCTCTGGACCTTCACCCTGCCGGGTCTACGCCAGCACCAGGAAGATATTGAACCGAACCT                                                                       <  SRR4302543.5817273/94‑1 (MQ=60)
                         CAAATTTCGCGAAGATCTGTACGCGCGGATCAATCTCTGGACCTTCACCCTGCCGGGTCTACGCCAGCACCAGGAAGATATTGAACCGAACCTG                                                                      <  SRR4302543.5244962/94‑1 (MQ=60)
                         CAAATTTCGCGAAGATCTGTACGCGCGGATCAATCTCTGGACCTTCACCCTGCCGGGTCTACGCCAGCACCAGGAAGATATTGAACCGAACCTG                                                                      >  SRR4302543.775264/1‑94 (MQ=60)
                          AAATTTCGCGAAGATCTGTACGCGCGGATCAATCTCTGGACCTTCACCCTGCCGGGTCTACGCCAGCACCAGGAAGATATTGAACCGAACCTGG                                                                     >  SRR4302543.956331/1‑94 (MQ=60)
                          AAATTTCGCGAAGATCTGTACGCGCGGATCAATCTCTGGACCTTCACCCTGCCGGGTCTACGCCAGCACCAGGAAGATATTGAACCGAACCTGG                                                                     <  SRR4302543.7893200/94‑1 (MQ=60)
                          AAATTTCGCGAAGATCTGTACGCGCGGATCAATCTCTGGACCTTCACCCTGCCGGGTCTACGCCAGCACCAGGAAGATATTGAACCGAACCTGG                                                                     >  SRR4302543.3863380/1‑94 (MQ=60)
                          AAATTTCGCGAAGATCTGTACGCGCGGATCAATCTCTGGACCTTCACCCTGCCGGGTCTACGCCAGCACCAGGAAGATATTGAACCGAACCTGG                                                                     <  SRR4302543.1185833/94‑1 (MQ=60)
                           AATTTCGCGAAGATCTGTACGCGCGGATCAATCTCTGGACCTTCACCCTGCCGGGTCTACGCCAGCACCAGGAAGATATTGAACCGAACCTGGA                                                                    <  SRR4302543.7706478/94‑1 (MQ=60)
                            ATTTCGCGAAGATCTGTACGCGCGGATCAATCTCTGGACCTTCACCCTGCCGGGTCTACGCCAGCACCAGGAAGATATTGAACCGAACCTGGAT                                                                   >  SRR4302543.2880139/1‑94 (MQ=60)
                            ATTTCGCGAAGATCTGTACGCGCGGATCAATCTCTGGACCTTCACCCTGCCGGGTCTACGCCAGCACCAGGAAGATATTGAACCGAACCTGGAT                                                                   <  SRR4302543.4696035/94‑1 (MQ=60)
                            ATTTCGCGAAGATCTGTACGCGCGGATCAATCTCTGGACCTTCACCCTGCCGGGTCTACGCCAGCACCAGGAAGATATTGAACCGAACCTGGAT                                                                   <  SRR4302543.7090293/94‑1 (MQ=60)
                            ATTTCGCGAAGATCTGTACGCGCGGATCAATCTCTGGACCTTCACCCTGCCGGGTCTACGCCAGCACCAGGAAGATATTGAACCGAACCTGGAT                                                                   >  SRR4302543.6336476/1‑94 (MQ=60)
                            ATTTCGCGAAGATCTGTACGCGCGGATCAATCTCTGGACCTTCACCCTGCCGGGTCTACGCCAGCACCAGGAAGATATTGAACCGAACCTGGAT                                                                   <  SRR4302543.7002887/94‑1 (MQ=60)
                            ATTTCGCGAAGATCTGTACGCGCGGATCAATCTCTGGACCTTCACCCTGCCGGGTCTACGCCAGCACCAGGAAGATATTGAACCGAACCTGGAT                                                                   >  SRR4302543.6771974/1‑94 (MQ=60)
                             TTTCGCGAAGATCTGTACGCGCGGATCAATCTCTGGACCTTCACCCTGCCGGGTCTACGCCAGCACCAGGAAGATATTGAACCGAACCTGGATT                                                                  <  SRR4302543.2962263/94‑1 (MQ=60)
                              TTCGCGAAGATCTGTACGCGCGGATCAATCTCTGGACCTTCACCCTGCCGGGTCTACGCCAGCACCAGGAAGATATTGAACCGAACCTGGATTA                                                                 <  SRR4302543.7932862/94‑1 (MQ=60)
                              TTCGCGAAGATCTGTACGCGCGGATCAATCTCTGGACCTTCACCCTGCCGGGTCTACGCCAGCACCAGGAAGATATTGAACCGAACCTGGATTA                                                                 >  SRR4302543.1521068/1‑94 (MQ=60)
                               TCGCGAAGATCTGTACGCGCGGATCAATCTCTGGACCTTCACCCTGCCGGGTCTACGCCAGCACCAGGAAGATATTGAACCGAACCTGGATTAT                                                                <  SRR4302543.3555355/94‑1 (MQ=60)
                                CGCGAAGATCTGTACGCGCGGATCAATCTCTGGACCTTCACCCTGCCGGGTCTACGCCAGCACCAGGAAGATATTGAACCGAACCTGGATTATG                                                               <  SRR4302543.7716407/94‑1 (MQ=60)
                                CGCGAAGAGCTGTACGCGCGGATCAATCTCTGGACCTTCACCCTGCCGGGTCTACGCCAGCACCAGGAAGATATTGAACCGAACCTGGATTATG                                                               <  SRR4302543.1876895/94‑1 (MQ=60)
                                 GCGAAGATCTGTACGCGCGGATCAATCTCTGGACCTTCACCCTGCCGGGTCTACGCCAGCACCAGGAAGATATTGAACCGAACCTGGATTATGA                                                              <  SRR4302543.5479880/94‑1 (MQ=60)
                                  CGAAGATCTGTACGCGCGGATCAATCTCTGGACCTTCACCCTGCCGGGTCTACGCCAGCACCAGGAAGATATTGAACCGAACCTGGATTATGCA                                                             >  SRR4302543.6208838/1‑94 (MQ=60)
                                  CGAAGATCTGTACGCGCGGATCAATCTCTGGACCTTCACCCTGCCGGGTCTACGCCAGCACCAGGAAGATATTGAACCGAACCTGGATTATGAA                                                             <  SRR4302543.3407852/94‑1 (MQ=60)
                                  CGAAGATCTGTACGCGCGGATCAATCTCTGGACCTTCACCCTGCCGGGTCTACGCCAGCACCAGGAAGATATTGAACCGAACATGGATTATGAA                                                             >  SRR4302543.3568488/1‑94 (MQ=60)
                                   GAAGATCTGTACGCGCGGATCAATCTCTGGACCTTCACCCTGCCGGGTCTACGCCAGCACCAGGAAGATATTGAACCGAACCTGGATTATGAAG                                                            >  SRR4302543.2861707/1‑94 (MQ=60)
                                    AAGATCTGTACGCGCGGATCAATCTCTGGACCTTCACCCTGCCGGGTCTACGCCAGCACCAGGAAGATATTGAACCGAACCTGGATTATGAAGT                                                           <  SRR4302543.4889594/94‑1 (MQ=60)
                                    AAGATCTGTACGCGCGGATCAATCTCTGGACCTTCACCCTGCCGGGTCTACGCCAGCACCAGGAAGATATTGAACCGAACCTGGATTATGAAGT                                                           >  SRR4302543.2591064/1‑94 (MQ=60)
                                    AAGATCTGTACGCGCGGATCAATCTCTGGACCTTCACCCTGCCGGGTCTACGCCAGCACCAGGAAGATATTGAACCGAACCTGGATTATGAAGT                                                           <  SRR4302543.5923073/94‑1 (MQ=60)
                                    AAGATCTGTACGCGCGGATCAATCTCTGGACCTTCACCCTGCCGGGTCTACGCCAGCACCAGGAAGATATTGAACCGAACCTGGATTATGAAGT                                                           >  SRR4302543.2785807/1‑94 (MQ=60)
                                     AGATCTGTACGCGCGGATCAATCTCTGGACCTTCACCCTGCCGGGTCTACGCCAGCACCAGGAAGATATTGAACCGAACCTGGATTATGAAGTG                                                          >  SRR4302543.45528/1‑94 (MQ=60)
                                      GATCTGTACGCGCGGATCAATCTCTGGACCTTCACCCTGCCGGGTCTACGCCAGCACCAGGAAGATATTGAACCGAACCTGGATTATGAAGTGG                                                         >  SRR4302543.1537577/1‑94 (MQ=60)
                                      GATCTGTACGCGCGGATCAATCTCTGGACCTTCACCCTGCCGGGTCTACGCCAGCACCAGGAAGATATTGAACCGAACCTGGATTATGAAGTGG                                                         >  SRR4302543.5835163/1‑94 (MQ=60)
                                      GATCTGTACGCGCGGATCAATCTCTGGACCTTCACCCTGCCGGGTCTACGCCAGCACCAGGAAGATATTGAACCGAACCTGGATTATGAAGTGG                                                         <  SRR4302543.2104975/94‑1 (MQ=60)
                                      GATCTGTACGCGCGGATCAATCTCTGGACCTTCACCCTGCCGGGTCTACGCCAGCACCAGGAAGATATTGAACCGAACCTGGATTATGAAGTGG                                                         >  SRR4302543.7805684/1‑94 (MQ=60)
                                      GATCTGTACGCGCGGATCAATCTCTGGACCTTCACCCTGCCGGGTCTACGCCAGCACCAGGAAGATATTGAACCGAACCTGGATTATGAAGTGG                                                         >  SRR4302543.2271007/1‑94 (MQ=60)
                                       ATCTGTACGCGCGGATCAATCTCTGGACCTTCACCCTGCCGGGTCTACGCCAGCACCAGGAAGATATTGAACCGAACCTGGATTATGAAGTGGA                                                        <  SRR4302543.6636324/94‑1 (MQ=60)
                                       ATCTGTACGCGCGGATCAATCTCTGGACCTTCACCCTGCCGGGTCTACGCCAGCACCAGGAAGATATTGAACCGAACCTGGATTATGAAGTGGA                                                        <  SRR4302543.727159/94‑1 (MQ=60)
                                        TCTGTACGCGCGGATCAATCTCTGGACCTTCACCCTGCCGGGTCTACGCCAGCACCAGGAAGATATTGAACCGAACCTGGATTATGAAGTGGAG                                                       <  SRR4302543.6931742/94‑1 (MQ=60)
                                        TCTGTACGCGCGGATCAATCTCTGGACCTTCACCCTGCCGGGTCTACGCCAGCACCAGGAAGATATTGAACCGAACCTGGATTATGAAGTGGAG                                                       <  SRR4302543.1931984/94‑1 (MQ=60)
                                        TCTGTACGCGCGGATCAATCTCTGGACCTTCACCCTGCCGGGTCTACGCCAGCACCAGGAAGATATTGAACCGAACCTGGATTATGAAGTGGAG                                                       >  SRR4302543.5667139/1‑94 (MQ=60)
                                         CTGTACGCGCGGATCAATCTCTGGACCTTCACCCTGCCGGGTCTACGCCAGCACCAGGAAGATATTGAACCGAACCTGGATTATGAAGTGGAGC                                                      >  SRR4302543.4883249/1‑94 (MQ=60)
                                         CTGTACGCGCGGATCAATCTCTGGACCTTCACCCTGCCGGGTCTACGCCAGCACCAGGAAGATATTGAACCGAACCTGGATTATGAAGTGGAGC                                                      >  SRR4302543.7731311/1‑94 (MQ=60)
                                         CTGTACGCGCGGATCAATCTCTGGACCTTCACCCTGCCGGGTCTACGCCAGCACCAGGAAGATATTGAAACGAACCTGGATTATGAAGTGGAGC                                                      <  SRR4302543.6942070/94‑1 (MQ=60)
                                          TGTACGCGCGGATCAATCTCTGGACCTTCACCCTGCCGGGTCTACGCCAGCACCAGGAAGATATTGAACCGAACCTGGATTATGAAGTGGAGCG                                                     >  SRR4302543.594248/1‑94 (MQ=60)
                                          TGTACGCGCGGATCAATCTCTGGACCTTCACCCTGCCGGGTCTACGCCAGCACCAGGAAGATATTGAACCGAACCTGGATTATGAAGTGGAGCG                                                     <  SRR4302543.570996/94‑1 (MQ=60)
                                          TGTACGCGCGGATCAATCTCTGGACCTTCACCCTGCCGGGTCTACGCCAGCACCAGGAAGATATTGAACCGAACCTGGATTATGAAGTGGAGCG                                                     >  SRR4302543.1340186/1‑94 (MQ=60)
                                           GTACGCGCGGATCAATCTCTGGACCTTCACCCTGCCGGGTCTACGCCAGCACCAGGAAGATATTGAACCGAACCTGGATTATGAAGTGGAGCGC                                                    >  SRR4302543.7236052/1‑94 (MQ=60)
                                            TACGCGCGGATCAATCTCTGGACCTTCACCCTGCCGGGTCTACGCCAGCACCAGGAAGATATTGAACCGAACCTGGATTATGAAGTGGAGCGCC                                                   >  SRR4302543.6483864/1‑94 (MQ=60)
                                             TCGCGCGGATCAATCTCTGGACCTTCACCCTGCCGGGTCTACGCCAGCACCAGGAAGATATTGAACCGAACCTGGATTATGAAGTGGAGCGCCA                                                  <  SRR4302543.2069930/94‑1 (MQ=60)
                                              CGCGCGGATCAATCTTTGGACCTTCACCCTGCCGGGTCTACGCCAGCACCAGGAAGATATTGAACCGAACCTGGATTATGAAGTGGAGCGCCAC                                                 <  SRR4302543.3496606/94‑1 (MQ=60)
                                              CGCGCGGATCAATCTCTGGACCTTCACCCTGCCGGGTCTACGCCAGCACCAGGAAGATATTGAACCGAACCTGGATTATGAAGTGGAGCGCCAC                                                 <  SRR4302543.1352415/94‑1 (MQ=60)
                                              CGCGCGGATCAATCTCTGGACCTTCACCCTGCCGGGTCTACGCCAGCACCAGGAAGATATTGAACCGAACCTGGATTATGAAGTGGAGCGCCAC                                                 >  SRR4302543.4754592/1‑94 (MQ=60)
                                              CGCGCGGATCAATCTCTGGACCTTCACCCTGCCGGGTCTACGCCAGCACCAGGAAGATATTGAACCGAACCTGGATTATGAAGTGGAGCGCCAC                                                 <  SRR4302543.324745/94‑1 (MQ=60)
                                               GCGCGGATCAATCTCTGGACCTTCACCCTGCCGGGTCTACGCCAGCACCAGGAAGATATTGAACCGAACCTGGATTATGAAGTGGAGCGCCACG                                                <  SRR4302543.4551074/94‑1 (MQ=60)
                                               GCGCGGATCAATCTCTGGACCTTCACCCTGCCGGGTCTACGCCAGCACCAGGAAGATATTGAACCGAACCTGGATTATGAAGTGGAGCGCCACG                                                <  SRR4302543.2907369/94‑1 (MQ=60)
                                               GAGCGCATCAATCTCTGGACCTTCCCCCTGCCGCGTCCACCGCAGCACCAAGAAGATATTGAACCGAACCTGGATTATGAAGTGGAGCGCCACG                                                <  SRR4302543.6369279/94‑1 (MQ=60)
                                                CGCGGATCAATCTCTGGACCTTCACCCTGCCGGGTCTACGCCAGCACCAGGAAGATATTGAACCGAACCTGGATTATGAAGTGGAGCGCCACGC                                               >  SRR4302543.5706206/1‑94 (MQ=60)
                                                   GGATCAATCTCTGGACCTTCACCCTGCCGGGTCTACGCCAGCACCAGGAAGATATTGAACCGAACCTGGATTATGAAGTGGAGCGCCACGCCTC                                            >  SRR4302543.3762434/1‑94 (MQ=60)
                                                   GGATCAATCTCTGGACCTTCACCCTGCCGGGTCTACGCCAGCACCAGGAAGATATTGAACCGAACCTGGATTATGAAGTGGAGCGCCACGCCTC                                            >  SRR4302543.6694958/1‑94 (MQ=60)
                                                    GATCAATCTCTGGACCTTCACCCTGCCGGGTCTACGCCAGCGCCAGGAAGATATTGAACCGAACCTGGATTATGAAGTGGAGCGCCACGCCTCA                                           <  SRR4302543.7985780/94‑1 (MQ=60)
                                                    GATCAATCTCTGGACCTTCACCCTGCCGGGTCTACGCCAGCACCAGGAAGATATTGAACCGAACCTGGATTATGAAGTGGAGCGCCACGCCTCA                                           >  SRR4302543.7418691/1‑94 (MQ=60)
                                                    GATCAATCTCTGGACCTTCACCCTGCCGGGTCTACGCCAGCACCAGGAAGATATTGAACCGAACCTGGATTATGAAGTGGAGCGCCACGCCTCA                                           <  SRR4302543.6350854/94‑1 (MQ=60)
                                                     ATCAATCTCTGGACCTTCACCCTGCCGGGTCTACGCCAGCACCAGGAAGATATTGAACCGAACCTGGATTATGAAGTGGAGCGCCACGCCTCAC                                          >  SRR4302543.5256616/1‑94 (MQ=60)
                                                      TCAATCTCTGGACCTTCACCCTGCCGGGTCTACGCCAGCACCAGGAAGATATTGAACCGAACCTGGATTATGAAGTGGAGCGCCACGCCTCACT                                         <  SRR4302543.2005045/94‑1 (MQ=60)
                                                         ATCTCTGGACCTTCACCCTGCCGGGTCTACGCCAGCACCAGGAAGATATTGAACCGAACCTGGATTATGAAGTGGAGCGCCACGCCTCACTCAC                                      <  SRR4302543.7206728/94‑1 (MQ=60)
                                                         ATCTCTGGACCTTCACCCTGCCGGGTCTACGCCAGCACCAGGAAGATATTGAACCGAACCTGGATTATGAAGTGGAGCGCCACGCCTCACTCAC                                      >  SRR4302543.2028155/1‑94 (MQ=60)
                                                         ATCTCTGGACCTTCACCCTGCCGGGTCTACGCCAGCACCAGGAAGATATTGAACCGAACCTGGATTATGAAGTGGAGCGCCACGCCTCACTCAC                                      <  SRR4302543.2314093/94‑1 (MQ=60)
                                                         ATCTCTGGACCTTCACCCTGCCGGGTCTACGCCAGCACCAGGAAGATATTGAACCGAACCTGGATTATGAAGTGGAGCGCCACGCCTCACTCAC                                      >  SRR4302543.1534812/1‑94 (MQ=60)
                                                          TCTCTGGACCTTCACCCTGCCGGGTCTACGCCAGCACCAGGAAGATATTGAACCGAACCTGGATTATGAAGTGGAGCGCCACGCCTCACTCACT                                     <  SRR4302543.6711394/94‑1 (MQ=60)
                                                          TCTCTGGACCTTCACCCTGCCGGGTCTACGCCAGCACCAGGAAGATATTGAACCGAACCTGGATTATGAAGTGGAGCGCCACGCCTCACTCACT                                     <  SRR4302543.290146/94‑1 (MQ=60)
                                                           cgctggaccttacgCCTGCCGGGTCTACCCCAGCACCAGGAAGATATTGAACCCAACCTGGATTATGAAGTGGAGCGCCACGCCTCACTCACTG                                    <  SRR4302543.7152971/80‑1 (MQ=60)
                                                           CTCTGGACCTTCACCCTGCCGGGTCTACGCCAGCACCAGGAAGATATTGAACCGAACCTGGATTATGAAGTGGAGCGCCACGCCTCACTCACTG                                    <  SRR4302543.2741211/94‑1 (MQ=60)
                                                           CTCTGGACCTTCACCCTGCCGGGTCTACGCCAGCACCAGGAAGATATTGAACCGAACCTGGATTATGAAGTGGAGCGCCACGCCTCACTCACTG                                    >  SRR4302543.6421202/1‑94 (MQ=60)
                                                           CTCTGGACCTTCACCCTGCCGGGTCTACGCCAGCACCAGGAAGATATTGAACCGAACCTGGATTATGAAGTGGAGCGCCACGCCTCACTCACTG                                    >  SRR4302543.214280/1‑94 (MQ=60)
                                                             CTGGACCTTCACCCTGCCGGGTCTACGCCAGCACCAGGAAGATATTGAACCGAACCTGGATTATGAAGTGGAGCGCCACGCCTCACTCACTGGC                                  >  SRR4302543.5797353/1‑94 (MQ=60)
                                                             CTGGACCTTCACCCTGCCGGGTCTACGCCAGCACCAGGAAGATATTGAACCGAACCTGGATTATGAAGTGGAGCGCCACGCCTCACTCACTGGC                                  >  SRR4302543.2630687/1‑94 (MQ=60)
                                                              TGGACCTTCCCCCTGCCGGGTCTACGCCAGCACCAGGAAGATATTGAACCGAACCTGGATTATGAAGTGGAGCGCCACGCCTCACTCACTGGCG                                 <  SRR4302543.5249724/94‑1 (MQ=60)
                                                              TGGACCTTCACCCTGCCGGGTCTACGCCAGCACCAGGAAGATATTGAACCGAACCTGGATTATGAAGTGGAGCGCCACGCCTCACTCACTGGCG                                 >  SRR4302543.6907361/1‑94 (MQ=60)
                                                              TGGACCTTCACCCTGCCGGGTCTACGCCAGCACCAGGAAGATATTGAACCGAACCTGGATTATGAAGTGGAGCGCCACGCCTCACTCACTGGCG                                 >  SRR4302543.4305361/1‑94 (MQ=60)
                                                                GACCTTCACCCTGCCGGGTCTACGCCAGCACCAGGAAGATATTGAACCGAACCTGGATTATGAAGTGGAGCGCCACGCCTCACTCACTGGCGAC                               <  SRR4302543.3214716/94‑1 (MQ=60)
                                                                 ACCTTCACCCTGCCGGGTCTACGCCAGCACCAGGAAGATATTGAACCGAACCTGGATTATGAAGTGGAGCGCCACGCCTCACTCACTGGCGACA                              >  SRR4302543.804766/1‑94 (MQ=60)
                                                                 ACCTTCACCCTGCCGGGTCTACGCCAGCACCAGGAAGATATTGAACCGAACCTGGATTATGAAGTGGAGCGCCACGCCTCACTCACTGGCGACA                              >  SRR4302543.934440/1‑94 (MQ=60)
                                                                 ACCTTCACCCTGCCGGGTCTACGCCAGCACCAGGAAGATATTGAACCGAACCTGGATTATGAAGTGGAGCGCCACGCCTCACTCACTGGCGACA                              <  SRR4302543.7613505/94‑1 (MQ=60)
                                                                  CCTTCACCCTGCCGGGTCTACGCCAGCACCAGGAAGATATTGAACCGAACCTGGATTATGAAGTGGAGCGCCACGCCTCACTCACTGGCGACAG                             >  SRR4302543.1787332/1‑94 (MQ=60)
                                                                  CCTTCACCCTGCCGGGTCTACGCCAGCACCAGGAAGATATTGAACCGAACCTGGATTATGAAGTGGAGCGCCACGCCTCACTCACTGGCGACAG                             >  SRR4302543.5143744/1‑94 (MQ=60)
                                                                  CCTTCACCCTGCCGGGTCTACGCCAGCACCAGGAAGATATTGAACCGAACCTGGATTATGAAGTGGAGCGCCACGCCTCACTCACTGGCGACAG                             >  SRR4302543.5681602/1‑94 (MQ=60)
                                                                   CTTCACCCTGCCGGGTCTACGCCAGCACCAGGAAGATATTGAACTGAACCTGGATTATGAAGTGGAGCGCCACGCCTCACTCACTGGCGACAGC                            >  SRR4302543.6783807/1‑94 (MQ=60)
                                                                   CTTCACCCTGCCGGGTCTACGCCAGCACCAGGAAGATATTGAACCGAACCTGGATTATGAAGTGGAGCGCCACGCCTCACTCACTGGCGACAGC                            <  SRR4302543.7698862/94‑1 (MQ=60)
                                                                   CTTCACCCTGCCGGGTCTACGCCAGCACCAGGAAGATATTGAACCGAACCTGGATTATGAAGTGGAGCGCCACGCCTCACTCACTGGCGACAGC                            <  SRR4302543.1259419/94‑1 (MQ=60)
                                                                    TTCACCCTGCCGGGTCTACGCCAGCACCAGGAAGATATTGAACCGAACCTGGATTATGAAGTGGAGCGCCACGCCTCACTCACTGGCGACAGCG                           >  SRR4302543.1564411/1‑94 (MQ=60)
                                                                    TTCACCCTGCCGGGTCTACGCCAGCACCAGGAAGATATTGAACCGAACCTGGATTATGAAGTGGAGCGCCACGCCTCACTCACTGGCGACAGCG                           <  SRR4302543.7217512/94‑1 (MQ=60)
                                                                      CACCCTGCCGGGTCTACGCCAGCACCAGGAAGATATTGAACCGAACCTGGATTATGAAGTGGAGCGCCACGCCTCACTCACTGGCGACAGCGTG                         <  SRR4302543.6459186/94‑1 (MQ=60)
                                                                       CCCCTGCCGGGTCTACGCCAGCACCAGGAAGATATTGAACCGAACCTGGATTATGAAGTGGAGCGCCACGCCTCACTCACTGGCGACAGCGTGC                        <  SRR4302543.2548967/94‑1 (MQ=60)
                                                                       ACCCTGCCGGGTCTACGCCAGCACCAGGAAGATATTGAACCGAACCTGGATTATGAAGTGGTGCGCCACGCCTCACTCACTGGCGACAGCGTGC                        >  SRR4302543.4978769/1‑94 (MQ=60)
                                                                        CCCTGCCGGGTCTACGCCAGCACCAGGAAGATATTGAACCGAACCTGGATTATGAAGTGGAGCGCCACGCCTCACTCACTGGCGACAGCGTGCG                       <  SRR4302543.4050861/94‑1 (MQ=60)
                                                                        CCCTGCCGGGTCTACGCCAGCACCAGGAAGATATTGAACCGAACCTGGATTATGAAGTGGAGCGCCACGCCTCACTCACTGGCGACAGCGTGCG                       <  SRR4302543.4267957/94‑1 (MQ=60)
                                                                        CCCTGCCGGGTCTACGCCAGCACCAGGAAGATATTGAACCGAACCTGGATTATGAAGTGGAGCGCCACGCCTCACTCACTGGCGACAGCGTGCG                       >  SRR4302543.2036719/1‑94 (MQ=60)
                                                                         CCTGCCGGGTCTACGCCAGCACCAGGAAGATATTGAACCGAACCTGGATTATGAAGTGGAGCGCCACGCCTCACTCACTGGCGACAGCGTGCGT                      >  SRR4302543.7769767/1‑94 (MQ=60)
                                                                         CCTGCCGGGTCTACGCCAGCACCAGGAAGATATTGAACCGAACCTGGATTATGAAGTGGAGCGCCACGCCTCACTCACTGGCGACAGCGGGCGT                      >  SRR4302543.1508552/1‑94 (MQ=60)
                                                                          CTGCCGGGTCTACGCCAGCACCAGGAAGATATTGAACCGAACCTGGATTATGAAGTGGAGCGCCACGCCTCACTCACTGGCGACAGCGTGCGTT                     >  SRR4302543.7157398/1‑94 (MQ=60)
                                                                          CTGCCGGGTCTACGCCAGCACCAGGAAGATATTGAACCGAACCTGGATTATGAAGTGGAGCGCCACGCCTCACTCACTGGCGACAGCGTGCGTT                     >  SRR4302543.3705336/1‑94 (MQ=60)
                                                                          CTGCCGGGTCTACGCCAGCACCAGGAAGATATTGAACCGAACCTGGATTATGAAGTGGAGCGACACGCCTCACTCACTGGCGACAGCGTGCGTT                     >  SRR4302543.2836755/1‑94 (MQ=60)
                                                                           TGCCGGGTCTACGCCAGCACCAGGAAGATATTGAACCGAACCTGGATTATGAAGTGGAGCGCCACGCCTCACTCACTGGCGACAGCGTGCGTTT                    <  SRR4302543.6871237/94‑1 (MQ=60)
                                                                           TGCCGGGTCTACGCCAGCACCAGGAAGATATTGAACCGAACCTGGATTATGAAGTGGAGCGCCACGCCTCACTCACTGGCGACAGCGTGCGTTT                    >  SRR4302543.4693745/1‑94 (MQ=60)
                                                                           TGCCGGGTCTACGCCAGCACCAGGAAGATATTGAACCGAACCTGGATTATGAAGTGGAGCGCCACGCCTCACTCACTGGCGACAGCGTGCGTTT                    <  SRR4302543.6272843/94‑1 (MQ=60)
                                                                           TGCCGGGTCTACGCCAGCACCAGGAAGATATTGAACCGAACCTGGATTATGAAGTGGAGCGCCACGCCTCACTCACTGGCGACAGCGTGCGTTT                    <  SRR4302543.618567/94‑1 (MQ=60)
                                                                              CGGGTCTACGCCAGCACCAGGAAGATATTGAACCGAACCTGGATTATGAAGTGGAGCGCCCCGCCTCACTCACTGGCGACAGCGTGCGTTTTAA                 >  SRR4302543.1035713/1‑94 (MQ=60)
                                                                              CGGGTCTACGCCAGCACCAGGAAGATATTGAACCGAACCTGGATTATGAAGTGGAGCGCCACGCCTCACTCACTGGCGACAGCGTGCGTTTTAA                 >  SRR4302543.3654233/1‑94 (MQ=60)
                                                                              CGGGTCTACGCCAGCACCAGGAAGATATTGAACCGAACCTGGATTATGAAGTGGAGCGCCACGCCTCACTCACTGGCGACAGCGTGCGTTTTAA                 >  SRR4302543.1035714/1‑94 (MQ=60)
                                                                               GGGTCTACGCCAGCACCAGGAAGATATTGAACCGAACCTGGATTATGAAGTGGAGCGCCACGCCTCACTCACTGGCGACAGCGTGCGTTTTAAC                <  SRR4302543.3931333/94‑1 (MQ=60)
                                                                               GGGTCTACGCCAGCACCAGGAAGATATTGAACCGAACCTGGATTATGAAGTGGAGCGCCACGCCTCACTCACTGGCGACAGCGTGCGTTTTAAC                <  SRR4302543.5811156/94‑1 (MQ=60)
                                                                                GGTCTACGCCAGCACCAGGAAGATATTGAACCGAACCTGGATTATGAAGTGGAGCGCCACGCCTCACTCACTGGCGACAGCGTGCGTTTTAACA               <  SRR4302543.7098506/94‑1 (MQ=60)
                                                                                GGTCTACGCCAGCACCAGGAAGATATTGAACCGAACCTGGATTATGAAGTGGAGCGCCACGCCTCACTCACTGGCGACAGCGTGCGTTTTAACA               >  SRR4302543.1448020/1‑94 (MQ=60)
                                                                                GGTCTACGCCAGCACCAGGAAGATATTGAACCGAACCTGGATTATGAAGTGGAGCGCCACGCCTCACTCACTGGCGACAGCGTGCGTTTTAACA               <  SRR4302543.5163202/94‑1 (MQ=60)
                                                                                 GTCTACGCCAGCACCAGGAAGATATTGAACCGAACCTGGATTATGAAGTGGAGCGCCACGCCTCACTCACTGGCGACAGCGTGCGTTTTAACAC              <  SRR4302543.7717655/94‑1 (MQ=60)
                                                                                 GTCTACGCCAGCACCAGGAAGATATTGAACCGAACCTGGATTATGAAGTGGAGCGCCACGCCTCACTCACTGGCGACAGCGTGCGTTTTAACAC              <  SRR4302543.1547273/94‑1 (MQ=60)
                                                                                 GTCTACGCCAGCACCAGGAAGATATTGAACCGAACCTGGATTATGAAGTGGAGCGCCACGCCTCACTCACTGGCGACAGCGTGCGTTTTAACAC              <  SRR4302543.7717654/94‑1 (MQ=60)
                                                                                 GTCTACGCCAGCACCAGGAAGATATTGAACCGAACCTGGATTATGAAGTGGAGCGCCACGCCTCACTCACTGGCGACAGCGTGCGTTTTAACAC              <  SRR4302543.5516100/94‑1 (MQ=60)
                                                                                 GTCTACGCCAGCACCAGGAAGATATTGAACCGAACCTGGATTATGAAGTGGAGCGCCACGCCTCACTCACTGGCGACAGCGTGCGTTTTAACAC              >  SRR4302543.4932960/1‑94 (MQ=60)
                                                                                 GTCTACGCCAGCACCAGGAAGATATTGAACCGAACCTGGATTATGAAGTGGAGCGCCACGCCTCACTCACTGGCGACAGCGTGCGGTTTAACAC              >  SRR4302543.2964565/1‑94 (MQ=60)
                                                                                  TCTACGCCAGCACCAGGAAGATATTGAACCGAACCTGGATTATGAAGTGGAGCGCCACGCCTCACTCACTGGCGACAGCGTGCGTTTTAACACC             <  SRR4302543.3821494/94‑1 (MQ=60)
                                                                                   CTACGCCAGCACCAGGAAGATATTGAACCGAACCTGGATTATGAAGTGGAGCGCCACGCCTCACTCACTGGCGACAGCGTGCGTTTTAACACCG            >  SRR4302543.5412157/1‑94 (MQ=60)
                                                                                   CTACGCCAGCACCAGGAAGATATTGAACCGAACCTGGATTATGAAGTGGAGCGCCACGCCTCACTCACTGGCGACAGCGTGCGTTTTAACACCG            >  SRR4302543.5509457/1‑94 (MQ=60)
                                                                                   CTACGCCAGCACCAGGAAGATATTGAACCGAACCTGGATTATGAAGTGGAGCGCCACGCCTCACTCACTGGCGACAGCGTGCGTTTTAACACCG            >  SRR4302543.2882964/1‑94 (MQ=60)
                                                                                      CGCCAGCACCAGGAAGATATTGAACCGAACCTGGATTATGAAGTGGAGCGCCACGCCTCACTCACTGGCGACAGCGTGCGTTTTAACACCGAAG         <  SRR4302543.1816695/94‑1 (MQ=60)
                                                                                      CGCCAGCACCAGGAAGATATTGAACCGAACCTGGATTATGAAGTGGAGCGCCACGCCTCACTCACTGGCGACAGCGTGCGTTTTAACACCGAAG         <  SRR4302543.2582408/94‑1 (MQ=60)
                                                                                       GCCAGCACCAGGAAGATATTGAACCGAACCTGGATTATGAAGTGGAGCGCCACGCCTCACTCACTGGCGACAGCGTGCGTTTTAACACCGAAGC        <  SRR4302543.1435738/94‑1 (MQ=60)
                                                                                        CCAGCACCAGGAAGATATTGAACCGATCCTGGATTATGAAGTGGAGCGCCACGCCTCACTCACTGGCGACAGCGTGCGTTTTAACACCGAAGCG       <  SRR4302543.7484857/94‑1 (MQ=60)
                                                                                        CCAGCACCAGGAAGATATTGAACCGAACCTGGATTATGAAGTGGAGCGCCACGCCTCACTCACTGGCGACAGCGTGCGTTTTAACACCGAAGCG       <  SRR4302543.133092/94‑1 (MQ=60)
                                                                                        CCAGCACCAGGAAGATATTGAACCGAACCTGGATTATGAAGTGGAGCGCCACGCCTCACTCACTGGCGACAGCGTGCGTTTTAACACCGAAGCG       <  SRR4302543.7484856/94‑1 (MQ=60)
                                                                                         CAGCACCAGGAAGATATTGAACCGAACCTGGATTATGAAGTGGAGCGCCACGCCTCACTCACTGGCGACAGCGTGCGTTTTAACACCGAAGCGC      >  SRR4302543.6389714/1‑94 (MQ=60)
                                                                                         CAGCACCAGGAAGATATTGAACCGAACCTGGATTATGAAGTGGAGCGCCACGCCTCACTCACTGGCGACAGCGTGCGTTTTAACACCGAAGCGC      >  SRR4302543.1796374/1‑94 (MQ=60)
                                                                                         CAGCACCAGGAAGATATTGAACCGAACCTGGATTATGAAGTGGAGCGCCACGCCTCACTCACTGGCGACAGCGTGCGTTTTAACACCGAAGCGC      >  SRR4302543.7766652/1‑94 (MQ=60)
                                                                                          AGCACCAGGAAGATATTGAACCGAACCTGGATTATGAAGTGGAGCGCCACGCCTCACTCACTGGCGACAGCGTGCGTTTTAACACCGAAGCGCG     <  SRR4302543.2163949/94‑1 (MQ=60)
                                                                                            CACCAGGAAGATATTGAACCGAACCTGGATTATGAAGTGGAGCGCCACGCCTCACTCACTGGCGACAGCGTGCGTTTTAACACCGAAGCGCGGC   <  SRR4302543.1668098/94‑1 (MQ=60)
                                                                                             ACCAGGAAGATATTGAACCGAACCTGGATTATGAAGTGGAGCGCCACGCCTCACTCACTGGCGACAGCGTGCGTTTTAACACCGAAGCGCGGCG  >  SRR4302543.8008790/1‑94 (MQ=60)
                                                                                             |                                                                                             
ATTTGCGCCAGCTGGTTGCCGAAGGCAAATTTCGCGAAGATCTGTACGCGCGGATCAATCTCTGGACCTTCACCCTGCCGGGTCTACGCCAGCGCCAGGAAGATATTGAACCGAACCTGGATTATGAAGTGGAGCGCCACGCCTCACTCACTGGCGACAGCGTGCGTTTTAACACCGAAGCGCGGCG  >  NC_000913/3556897‑3557083

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 10 ≤ ATCG/ATCG < 28 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑