Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A1 F1 I1 R1 1696 279.3 15874187 97.8% 15524954 93.0

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 3,572,116 G→A G132G (GGC→GGT)  asd ← aspartate‑semialdehyde dehydrogenase

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009133,572,1160GA99.2% 1397.8 / ‑3.8 398G132G (GGC→GGT) asdaspartate‑semialdehyde dehydrogenase
Reads supporting (aligned to +/- strand):  ref base G (3/0);  new base A (182/213);  total (185/213)
Fisher's exact test for biased strand distribution p-value = 9.96e-02
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.82e-01

Only 100 of 414 total aligned reads displayed.

CTGGTAGGTTGCAACGGACACCCAATCAACAAGATCATTGGCGAATAAACCACCCAACGACATCAACATCAGGCTTACGGTACAGTTACCGCCAACAAAAGTCCTGATGCCATTATTTAATCCGTCGGTAATGACGTCCTGATTGACGGGGTCAAGAATGATGATGGCGTCATCTTTCA  >  NC_000913/3572026‑3572204
                                                                                          |                                                                                        
cTGGTAGGTTGCAACGGACACCCAATCAACAAGATCATTGGCGAATAAACCACCCAACGACATCAACATCAGGCTTACGGTACAGTTaccacc                                                                                        >  2:5707317/1‑93 (MQ=255)
 tGGTAGGTTGCAACGGACACCCAATCAACAAGATCATTGGCGAATAAACCACCCAACGACATCAACATCAGGCTTACGGTACAGTTAccacca                                                                                       >  2:3776577/1‑93 (MQ=255)
   gTAGGTTGCAACGGACACCCAATCAACAAGATCATTGGCGAATAAACCACCCAACGACATCAACATCAGGCTTACGGTACAGTTACCACcaac                                                                                     <  2:7675103/93‑1 (MQ=255)
   gTAGGTTGCAACGGACACCCAATCAACAAGATCATTGGCGAATAAACCACCCAACGACATCAACATCAGGCTTACGGTACAGTTACCACcaac                                                                                     >  1:3227501/1‑93 (MQ=255)
    tAGGTTGCAACGGACACCCAATCAACAAGATCATTGGCGAATAAACCACCCAACGACATCAACATCAGGCTTACGGTACAGTTACCACcaaca                                                                                    >  1:1759939/1‑93 (MQ=255)
    tAGGTTGCAACGGACACCCAATCAACAAGATCATTGGCGAATAAACCACCCAACGACATCAACATCAGGCTTACGGTACAGTTACCACcaaca                                                                                    <  2:4772839/93‑1 (MQ=255)
     aGGTTGCAACGGACACCCAATCAACAAGATCATTGGCGAATAAACCACCCAACGACATCAACATCAGGCTTACGGTACAGTTACCACcaacaa                                                                                   <  2:3210365/93‑1 (MQ=255)
      ggTTGCAACGGACACCCAATCAACAAGATCATTGGCGAATAAACCACCCAACGACATCAACATCAGGCTTACGGTACAGTTACCACCAACaaa                                                                                  >  1:6907939/1‑93 (MQ=255)
      ggTTGCAACGGACACCCAATCAACAAGATCATTGGCGAATAAACCACCCAACGACATCAACATCAGGCTTACGGTACAGTTACCACCAACaaa                                                                                  >  2:2469678/1‑93 (MQ=255)
        gtGCAACGGACACCCAATCAACAAGATCATTGGCGAATAAACCACCCAACGACATCAACATCAGGCTTACGGTACAGTTACCACCAACAAAAg                                                                                <  2:4559690/92‑1 (MQ=255)
            aaCGGACACCCAATCAACAAGATCATTGGCGAATAAACCACCCAACGACATCAACATCAGGCTTACGGTACAGTTACCACCAACAAAAGTCCt                                                                            >  2:5913045/1‑93 (MQ=255)
             aCGGACACCCAATCAACAAGATCATTGGCGAATAAACCACCCAACGACATCAACATCAGGCTTACGGTACAGTTACCACCAACAAAAGTCCTg                                                                           >  1:5978851/1‑93 (MQ=255)
             aCGGACACCCAATCAACAAGATCATTGGCGAATAAACCACCCAACGACATCAACATCAGGCTTACGGTACAGTTACCACCAACAAAAGTCCTg                                                                           <  2:2875888/93‑1 (MQ=255)
              cGGACACCCAATCAACAAGATCATTGGCGAATAAACCACCCAACGACATCAACATCAGGCTTACGGTACAGTTACCACCAACAAAAGTCCTGa                                                                          <  1:4413824/93‑1 (MQ=255)
              cGGACACCCAATCAACAAGATCATTGGCGAATAAACCACCCAACGACATCAACATCAGCCTTACGGTACAGTTACCACCAACAAAAGTCCTGa                                                                          <  2:4956673/93‑1 (MQ=255)
               ggACACCCAATCAACAAGATCATTGGCGAATAAACCACCCAACGACATCAACATCAGGCTTACGGTACAGTTACCACCAACAAAAGTCCTGAt                                                                         <  2:6644832/93‑1 (MQ=255)
                  cacCCAATCAACAAGATCATTGGCGAATAAACCACCCAACGACATCAACATCAGGCTTACGGTACAGTTACCACCAACAAAAGTCCTGATGcc                                                                      <  2:3472092/93‑1 (MQ=255)
                   acCCAATCAACAAGATCATTGGCGAATAAACCACCCAACGACATCAACATCAGGCTTACGGTACAGTTACCACCAACAAAAGTCCTGATGCCa                                                                     >  2:3079466/1‑93 (MQ=255)
                   acCCAATCAACAAGATCATTGGCGAATAAACCACCCAACGACATCAACATCAGGCTTACGGTACAGTTACCACCAACAAAAGTCCTGATGCCa                                                                     <  1:2662241/93‑1 (MQ=255)
                   acCCAATCAACAAGATCATTGGCGAATAAACCACCCAACGACATCAACATCAGGCTTACGGTACAGTTACCACCAACAAAAGTCCTGATGCCa                                                                     <  2:1807679/93‑1 (MQ=255)
                     ccAATCAACAAGATCATTGGCGAATAAACCACCCAACGACATCAACATCAGGCTTACGGTACAGTTACCACCAACAAAAGTCCTGATGCCatt                                                                   >  2:1905308/1‑93 (MQ=255)
                       aaTCAGCAAGATCATTGGCGAATAAACCACCCAACGACATCAACATCAGGCTTACGGTACAGTTACCACCAACAAAAGTCCTGATGCCattat                                                                 <  2:4724137/93‑1 (MQ=255)
                       aaTCAACAAGATCATTGGCGAATAAACCACCCAACGACATCAACATCAGGCTTACGGTACAGTTACCACCAACAAAAGTCCTGATGCCattat                                                                 >  2:5557295/1‑93 (MQ=255)
                       aaTCAACAAGATCATTGGCGAATAAACCACCCAACGACATCAACATCAGGCTTACGGTACAGTTACCACCAACAAAAGTCCTGATGCCattat                                                                 <  1:7143261/93‑1 (MQ=255)
                       aaTCAACAAGATCATTGGCGAATAAACCACCCAACGACATCAACATCAGGCTTACGGTACAGTTACCACCAACAAAAGTCCTGATGCCattat                                                                 >  2:4473759/1‑93 (MQ=255)
                        aTCAACAAGATCATTGGCGAATAAACCACCCAACGACATCAACATCAGGCTTACGGTACAGTTACCACCAACAAAAGTCCTGATGCCattatt                                                                <  1:7090856/93‑1 (MQ=255)
                         tCAACAAGATCATTGGCGAATAAACCACCCAACGACATCAACATCAGGCTTACGGTACAGTTACCACCAACAAAAGTCCTGATGCCATTAttt                                                               >  1:3625602/1‑93 (MQ=255)
                         tCAACAAGATCATTGGCGAATAAACCACCCAACGACATCAACATCAGGCTTACGGTACAGTTACCACCAACAAAAGTCCTGATGCCATTAttt                                                               <  1:147004/93‑1 (MQ=255)
                          caacaaGATCATTGGCGAATAAACCACCCAACGACATCAACATCAGGCTTACGGTACAGTTACCACCAACAAAAGTCCTGATGCCATTATTTa                                                              <  1:5485821/93‑1 (MQ=255)
                           aacaaGATCATTGGCGAATAAACCACCCAACGACATCAACATCAGGCTTACGGTACAGTTACCACCAACAAAAGTCCTGATGCCATTATTTaa                                                             <  2:4269167/93‑1 (MQ=255)
                           aacaaGATCATTGGCGAATAAACCACCCAACGACATCAACATCAGGCTTACGGAACAGTTACACCCACCAAAAGCCCTAATGCCATTATTTat                                                             >  1:5881886/1‑92 (MQ=255)
                            acaaGATCATTGGCGAATAAACCACCCAACGACATCAACATCAGGCTTACGGTACAGTTACCACCAACAAAAGTCCTGATGCCATTATTTAAt                                                            >  1:4713617/1‑93 (MQ=255)
                            acaaGATCATTGGCGAATAAACCACCCAACGACATCAACATCAGGCTTACGGTACAGTTACCACCAACAAAAGTCCTGATGCCATTATTTAAt                                                            <  2:3606259/93‑1 (MQ=255)
                            acaaGATCATTGGCGAATAAACCACCCAACGACATCAACATCAGGCTTACGGTACAGTTACCACCAACAAAAGTCCTGATGCCATTATTTAAt                                                            >  1:1893271/1‑93 (MQ=255)
                             caaGATCATTGGCGAATAAACCACCCAACGACATCAACATCAGGCTTACGGTACAGTTACCACCAACAAAAGTCCTGATGCCATTATTTAATc                                                           <  1:4474321/93‑1 (MQ=255)
                             caaGATCATTGGCGAATAAACCACCCAACGACATCAACATCAGGCTTACGGTACAGTTACCACCAACAAAAGTCCTGATGCCATTATTTAATc                                                           >  2:1184874/1‑93 (MQ=255)
                               aGATCATTGGCGAATAAACCACCCAACGACATCAACATCAGGCTTACGGTACAGTCACCACCAACAAAAGTCCTGATGCCATTATTTAATACg                                                         >  1:6021963/1‑93 (MQ=255)
                                gATCATTGGCGAATAAACCACCCAACGACATCAACATCAGGCTTACGGTACAGTTACCACCAACAAAAGTCCTGATGCCATTATTTAATCCGt                                                        <  2:735053/93‑1 (MQ=255)
                                 aTCATTGGCGAATAAACCACCCAACGACATCAACATCAGGCTTACGGTACAGTTACCACCAACAAAAGTCCTGATGCCATTATTTAATCCGTc                                                       <  1:6321336/93‑1 (MQ=255)
                                  tCATTGGCGAATAAACCACCCAACGACATCAACATCAGGCTTACGGTACAGTTACCACCAACAAAAGTCCTGATGCCATTATTTAATCCGTCg                                                      >  1:4970874/1‑93 (MQ=255)
                                  tCATTGGCGAATAAACCACCCAACGACATCAACATCAGGCTTACGGTACAGTTACCACCAACAAAAGTCCTGATGCCATTATTTAATCCGTCg                                                      >  2:1254300/1‑93 (MQ=255)
                                   cATTGGCGAATAAACCACCCAACGACATCAACATCAGGCTTACGGTACAGTTGCCACCAACAAAAGTCCTGATGCCATTATTTAATCCGTCgg                                                     >  2:4683468/1‑93 (MQ=255)
                                   cATTGGCGAATAAACCACCCAACGACATCAACATCAGGCTTACGGTACAGTTACCACCAACAAAAGTCCTGATGCCATTATTTAATCCGTCgg                                                     <  1:4570784/93‑1 (MQ=255)
                                    aTTGGCGAATAAACCACCCAACGACATCAACATCAGGCTTACGGTACAGTTACCACCAACAAAAGTCCTGATGCCATTATTTAATCCGTCGGt                                                    >  2:700430/1‑93 (MQ=255)
                                    aTTGGCGAATAAACCACCCAACGACATCAACATCAGGCTTACGGTACAGTTACCACCAACAAAAGTCCTGATGCCATTATTTAATCCGTCGGt                                                    >  2:297585/1‑93 (MQ=255)
                                    aTTGGCGAATAAACCACCCAACGACATCAACATCAGGCTTACGGTACAGTTACCACCAACAAAAGTCCTGATGCCATTATTTAATCCGTCGGt                                                    >  2:6829459/1‑93 (MQ=255)
                                     ttGGCGAATAAACCACCCAACGACATCAACATCAGGCTTACGGTACAGTTACCACCAACAAAAGTCCTGATGCCATTATTTAATCCGTCGGTa                                                   <  1:2771256/93‑1 (MQ=255)
                                     ttGGCGAATAAACCACCCAACGACATCAACATCAGGCTTACGGTACAGTTACCACCAACAAAAGTCCTGATGCCATTATTTAATCCGTCGGTa                                                   >  1:7440169/1‑93 (MQ=255)
                                      tGGCGAATAAACCACCCAACGACATCAACATCAGGCTTACGGTACAGTTACCACCAACAAAAGTCCTGATGGCATTATTTAATCCGTCGGTaa                                                  <  1:3897192/93‑1 (MQ=255)
                                      tGGCGAATAAACCACCCAACGACATCAACATCAGGCTTACGGTACAGTTACCACCAACAAAAGTCCTGATGCCATTATTTAATCCGTCGGTaa                                                  >  1:4909969/1‑93 (MQ=255)
                                       ggCGAATAAACCACCCAACGACATCAACATCAGGCTTACGGTACAGTTACCACCAACAAAAGTCCTGATGCCATTATTTAATCCGTCGGTAAt                                                 <  2:6523402/93‑1 (MQ=255)
                                       ggCGAATAAACCACCCAACGACATCAACATCAGGCTTACGGTACAGTTACCACCAACAAAAGTCCTGATGCCATTATTTAATCCGTCGGTAAt                                                 <  2:50467/93‑1 (MQ=255)
                                         cGAATAAACCCCCCAACGACATCAACATCAGGCTTACGGTACAGTTACCACCAACAAAAGTCCTGATGCCATTATTTAATCCGTCGGTAATGa                                               <  1:6235875/93‑1 (MQ=255)
                                         cGAATAAACCACCCAACGACATCAACATCAGGCTTACGGTACAGTTACCACCAACAAAAGTCCTGATGCCATTATTTAATCCGTCGGTAATGa                                               <  2:5180502/93‑1 (MQ=255)
                                         cGAATAAACCACCCAACGACATCAACATCAGGCTTACGGTACAGTTACCACCAACAAAAGTCCTGATGCCATTATTTAATCCGTCGGTAATGa                                               <  1:1064249/93‑1 (MQ=255)
                                           aaTAAACCACCCAACGACATCAACATCAGGCTTAAGGGACAGTTACCACCAACAAAAGTCCTGATGCCATTATTTAATCCGCCGGTACAGACg                                             >  2:5062798/1‑93 (MQ=255)
                                           aaTAAACCACCCAACGACATCAACATCAGGCTGCCGGGACAGTTACCACCAACAAAAGTCCTGATGCCATTATTTAATCCGTCGGTAATGACg                                             >  1:1381264/1‑93 (MQ=255)
                                             tAAACCACCCAACGACATCAACATCAGGCTTACGGTACAGTTACCACCAACAAAAGTCCTGATGCCATTATTTAATCCGTCGGTAATGACGTc                                           <  1:6516496/93‑1 (MQ=255)
                                              aaaCCACCCAACGACATCAACATCAGGCTTACGGTACAGTTACCACCAACAAAAGTCCTGATGCCATTATTTAATCCGTCGGTAATGACGTcc                                          <  1:5222502/93‑1 (MQ=255)
                                               aaCCACCCAACGACATCAACATCAGGCTTACGGTACAGTTACCACCAACAAAAGTCCTGATGCCATTATTTAATCCGTCGGTAATGACGTCCt                                         <  2:7126765/93‑1 (MQ=255)
                                                 ccaccCAACGACATCAACATCAGGCTTACGGTACAGTTACCACCAACAAAAGTCCTGATGCCATTATTTAATCCGTCGGTAATGACGTCCTGa                                       <  2:439866/93‑1 (MQ=255)
                                                  caccCAACGACATCAACATCAGGCTTACGGTACAGTTACCACCAACAAAAGTCCTGATGCCATTATTTAATCCGTCGGTAATGACGTCCTGAt                                      >  1:182377/1‑93 (MQ=255)
                                                   ccccAACGACATCAACATCAGGCTTACGGTACAGTTACCACCAACAAAAGTCCTGATGCCATTATTTAATCCGTCGGTAATGACGTCCTGAtt                                     <  2:2349655/92‑1 (MQ=255)
                                                    cccAACGACATCAACATCAGGCTTACGGTACAGTTACCACCAACAAAAGTCCTGATGCCATTAGTTAATCCGTCGGCAATGACGTCCTGATTg                                    >  1:6409140/1‑93 (MQ=255)
                                                     ccAACGACATCAACATCAGGCTTACGGTACAGTTACCACCAACAAAAGTCCTGATGCCATTATTTAATCCGTCGGTAATGACGTCCTGATTGa                                   <  1:5732713/93‑1 (MQ=255)
                                                      cAACGACATCAACATCAGGCTTACGGTACAGTTACCACCAACAAAAGTCCTGATGCCATTATTTAATCCGTCGGTAATGACGTCCTGATTGAc                                  <  1:3769181/93‑1 (MQ=255)
                                                      cAACGACATCAACATCAGGCTTACGGTACAGTTACCACCAACAAAAGTCCTGATGCCATTATTTAATCCGTCGGTAATGACGTCCTGATTGAc                                  >  1:2924135/1‑93 (MQ=255)
                                                       aaCGACATCAACATCAGGCTTACGGTACAGTTACCACCAACAAAAGTCCTGATGCCATTATTTAATCCGTCGGTAATGACGTCCTGATTGACg                                 >  2:6737233/1‑93 (MQ=255)
                                                       aaCGACATCAACATCAGGCTTACGGTACAGTTACCACCAACAAAAGTCCTGATGCCATTATTTAATCCGTCGGTAATGACGTCCTGATTGACg                                 <  2:5763230/93‑1 (MQ=255)
                                                       aaCGACATCAACATCAGGCTTACGGTACAGTTACCACCAACAAAAGTCCTGATGCCATTATTTAATCCGTCGGTAATGACGTCCTGATTGACg                                 <  1:7575059/93‑1 (MQ=255)
                                                           acatcaacatcaGGCTTACGGTACAGTTACCACCAACAAAAGTCCTGATGCCATTATTTAATCCGTCGGTAATGACGTCCTGATTGACTGGGt                             >  1:6785258/1‑93 (MQ=255)
                                                           acatcaacatcaGGCTTACGGTACAGTTACCACCAACAAAAGTCCTGATGCCATTATTTAATCCGTCGGTAATGACGTCCTGATTGACGGGGt                             >  2:485227/1‑93 (MQ=255)
                                                              tcaacatcaGGCTTACGGTACAGTTACCACCAACAAAAGTCCTGATGCCATTATTTAATCCGTCGGTAATGACGTGCTGATGGACGGGGTCaa                          >  1:193757/1‑93 (MQ=255)
                                                              tcaacatcaGGCTTACGGTACAGTTACCACCAACAAAAGTCCTGATGCCATTATTTAATCCGTCGGTAATGACGTCCTGATTGACGGGGTCaa                          <  2:7894269/93‑1 (MQ=255)
                                                              tcaacatcaGGCTTACGGTACAGTTACCACCAACAAAAGTCCTGATGCCATTATTTAATCCGTCGGTAATGACGTCCTGATTGACGGGGTCaa                          <  1:119926/93‑1 (MQ=255)
                                                              tcaacatcaGGCTTACGGTACAGTTACCACCAACAAAAGTCCTGATGCCATTATTTAATCCGTCGGTAATGACGTCCTGATTGACGGGGTCaa                          >  2:1734827/1‑93 (MQ=255)
                                                               caacatcaGGCTTACGGTACAGTTACCACCAACAAAAGTCCTGATGCCATTATTTAATCCGTCGGTAATGACGTCCTGATTGACGGGGTCAAg                         >  1:5563635/1‑93 (MQ=255)
                                                                 acatcaGGCTTACGGTACAGTTACCACCAACAAAAGTCCTGATGCCATTATTTAATCCGTCGGTAATGACGTCCTGATTGACGGGGTCAAGaa                       <  2:2801968/93‑1 (MQ=255)
                                                                   atcaGGCTTACGGTACAGTTACCACCAACAAAAGTCCTGATGCCATTATTTAATCCGTCGGTAATGACGTCCTGATTGACGGGGTCAAGAatg                     >  2:1503839/1‑93 (MQ=255)
                                                                    tcaGGCTTACGGTACAGTTACCACCAACAAAAGTCCTGATGCCATTATTTAATCCGTCGGTAATGACGTCCTGATTGACGGGGTCAAGAatga                    >  2:6190104/1‑93 (MQ=255)
                                                                    tcaGGCTTACGGTACAGTTACCACCAACAAAAGTCCTGATGCCATTATTTAATCCGTCGGTAATGACGTCCTGATTGACGGGGTCAAGAatga                    <  2:2726739/93‑1 (MQ=255)
                                                                     caGGCTTACGGTACAGTTACCACCAACAAAAGTCCTGATGCCATTATTTAATCCGTCGGTAATGACGTCCTGATTGACGGGGTCAAGAatgat                   <  2:6399372/93‑1 (MQ=255)
                                                                       ggCTTACGGTACAGTTACCACCAACAAAAGTCCTGATGCCATTATTTAATCCGTCGGTAATGACGTCCTGATTGACGGGGTCAAGAatgatga                 <  1:5645559/93‑1 (MQ=255)
                                                                       ggCTTACGGTACAGTTACCACCAACAAAAGTCCTGATGCCATTATTTAATCCGTCGGTAATGACGTCCTGATTGACGGGGTCAAGAatgatga                 <  1:3462769/93‑1 (MQ=255)
                                                                       ggCTTACGGTACAGTTACCACCAACAAAAGTCCTGATGCCATTATTTAATCCGTCGGTAATGACGTCCTGATTGACGGGGTCAAGAatgatga                 <  1:2509319/93‑1 (MQ=255)
                                                                        gCTTACGGTACAGTTACCACCAACAAAAGTCCTGATGCCATTATTTAATCCGTCGGTAATGACGTCCTGATTGACGGGGTCAAGAatgatgat                <  2:3326488/93‑1 (MQ=255)
                                                                        gCTTACGGTACAGTTACCACCAACAAAAGTCCTGATGCCATTATTTAATCCGTCGGTAATGACGTCCTGATTGACGGGGTCAAGAatgatgat                <  1:4320002/93‑1 (MQ=255)
                                                                         cTTACGGTACAGTTACCACCAACAAAAGTCCTGATGCCATTATTTAATCCGTCGGTAATGACGTCCTGATTGACGGGGTCAAGAatgatgatg               <  1:2052429/93‑1 (MQ=255)
                                                                          ttACGGTACAGTTACCACCAACAAAAGTCCTGATGCCATTATTTAATCCGTCGGTAATGACGTCCTGATTGACGGGGTCAAGAATGATGATgg              >  1:7838/1‑93 (MQ=255)
                                                                          ttACGGTACAGTTACCACCAACAAAAGTCCTGATGCCATTATTTAATCCGTCGGTAATGACGTCCTGATTGACGGGGTCAAGAATGATGATgg              >  2:3894709/1‑93 (MQ=255)
                                                                          ttACGGTACAGTTACCACCAACAAAAGTCCTGATGCCATTATTTAATCCGTCGGTAATGACGTCCTGATTGACGGGGTCAAGAATGATGATgg              <  2:7524680/93‑1 (MQ=255)
                                                                           tACGGTACAGTTACCACCAACAAAAGTCCTGATGCCATTATTTAATCCGTCGGTAATGACGTCCTGATTGACGGGGTCAAGAATGATGATGGc             <  1:5312985/93‑1 (MQ=255)
                                                                              ggTACAGTTACCACCAACAAAAGTCCTGATGCCATTATTTAATCCGTCGGTAATGACGTCCTGATTGACGGGGTCAAGAATGATGATGGCGTc          <  1:4157546/93‑1 (MQ=255)
                                                                              ggTACAGTTACCACCAACAAAAGTCCTGATGCCATTATTTAATCCGTCGGTAATGACGTCCTGATTGACGGGGTCAAGAATGATGATGGCGTc          >  1:2181265/1‑93 (MQ=255)
                                                                                  cAGTTACCACCAACAAAAGTCCTGATGCCATTATTTAATCCGTCGGTAATGACGTCCTGATTGACGGGGTCAAGAATGATGATGGCGTCATCt      <  2:2003553/93‑1 (MQ=255)
                                                                                    gTTACCACCAACAAAAGTCCTGATGCCATTATTTAATCCGTCGGTAATGACGTCCTGATTGACGGGGTCAAGAATGATGATGGCGTCATCttt    >  2:7435299/1‑93 (MQ=255)
                                                                                     ttACCACCAACAAAAGTCCTGATGCCATTATTTAATCCGTCGGTAATGACGTCCTGATTGACGGGGTCAAGAATGATGATGGCGTCATCTTTc   >  1:3354624/1‑93 (MQ=255)
                                                                                     ttACCACCAACAAAAGTCCTGATGCCATTATTTAATCCGTCGGTAATGACGTCCTGATTGACGGGGTCAAGAATGATGATGGCGTCATCTTTc   <  2:1635725/93‑1 (MQ=255)
                                                                                      tACCACCAACAAAAGTCCTGATGCCATTATTTAATCCGTCGGTAATGACGTCCTGATTGACGGGGTCAAGAATGATGATGGCGTCATCTTTCa  <  1:2278781/93‑1 (MQ=255)
                                                                                      tACCACCAACAAAAGTCCTGATGCCATTATTTAATCCGTCGGTAATGACGTCCTGATTGACGGGGTCAAGAATGATGATGGCGTCATCTTTCa  >  2:112304/1‑93 (MQ=255)
                                                                                          |                                                                                        
CTGGTAGGTTGCAACGGACACCCAATCAACAAGATCATTGGCGAATAAACCACCCAACGACATCAACATCAGGCTTACGGTACAGTTACCGCCAACAAAAGTCCTGATGCCATTATTTAATCCGTCGGTAATGACGTCCTGATTGACGGGGTCAAGAATGATGATGGCGTCATCTTTCA  >  NC_000913/3572026‑3572204

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

BRESEQ :: bam2aln output Only 200 of 214 total aligned reads displayed.
GGCCTGGTAGGTTGCAACGGACACCCAATCAACAAGATCATTGGCGAATAAACCACCCAACGACATCAACATCAGGCTTACGGTACAGTTACCGCCAACAAAAGTCCTGATGCCATTATTTAATCCGTCGGTAATGACGTCCTGATTGACGGGGTCAAGAATGATGATGGCGTCATCTTTCATGCGC  >  NC_000913/3572023‑3572209
                                                                                             |                                                                                             
GGCCTGGTAGGTTGCAACGGACACCCAATCAACAAGATCATTGGCGAATAAACCACCCAACGACATCAACATCAGGCTTACGGTACAGTTACCA                                                                                               >  SRR4302543.32555/1‑94 (MQ=60)
GGCCTGGTAGGTTGCAACGGACACCCAATCAACAAGATCATTGGCGAATAAACCACCCAACGACATCAACATCAGGCTTACGGTACAGTTACCA                                                                                               >  SRR4302543.7360940/1‑94 (MQ=60)
GGCCTGGTAGGTTGCAACGGACACCCAATCAACAAGATCATTGGCGAATAAACCACCCAACGACATCAACATCAGGCTTACGGTACAGTTACCA                                                                                               >  SRR4302543.1953943/1‑94 (MQ=60)
 GCCTGGTAGGTTGCAACGGACACCCAATCAACAAGATCATTGGCGAATAAACCACCCAACGACATCAACATCAGGCTTACGGTACAGTTACCAC                                                                                              >  SRR4302543.3176684/1‑94 (MQ=60)
 GCCTGGTAGGTTGCAACGGACACCCAATCAACAAGATCATTGGCGAATAAACCACCCAACGACATCAACATCAGGCTTACGGTACAGTTACCAC                                                                                              >  SRR4302543.946745/1‑94 (MQ=60)
  CCTGGTAGGTTGCAACGGACACCCAATCAACAAGATCATTGGCGAATAAACCACCCAACGACATCAACATCAGGCTTACGGTACAGTTACCACC                                                                                             >  SRR4302543.5288779/1‑94 (MQ=60)
   CTGGTAGGTTGCAACGGACACCCAATCAACAAGATCATTGGCGAATAAACCACCCAACGACATCAACATCAGGCTTACGGTACAGTTACCACCA                                                                                            >  SRR4302543.3782143/1‑94 (MQ=60)
   CTGGTAGGTTGCAACGGACACCCAATCAACAAGATCATTGGCGAATAAACCACCCAACGACATCAACATCAGGCTTACGGTACAGTTACCACCA                                                                                            <  SRR4302543.4389962/94‑1 (MQ=60)
    TGGTAGGTTGCAACGGACACCCAATCAACAAGATCATTGGCGAATAAACCACCCAACGACATCAACATCAGGCTTACGGTACAGTTACCACCAA                                                                                           >  SRR4302543.7585540/1‑94 (MQ=60)
    TGGTAGGTTGCAACGGACACCCAATCAACAAGATCATTGGCGAATAAACCACCAAACGACCTCAACATCAGGCTTACGGTACAGTTACCACCAA                                                                                           >  SRR4302543.3009449/1‑94 (MQ=60)
     GGTAGGTTGCAACGGACACCCAATCAACAAGATCATTGGCGAATAAACCACCCAACGACATCAACATCAGGCTTACGGTACAGTTACCACCAAC                                                                                          >  SRR4302543.3256683/1‑94 (MQ=60)
     GGTAGGTTGCAACGGACACCCAATCAACAAGATCATTGGCGAATAAACCACCCAACGACATCAACATCAGGCTTACGGTACAGTTACCACCAAC                                                                                          >  SRR4302543.5928152/1‑94 (MQ=60)
      GTAGGTTGCAACGGACACCCAATCAACAAGATCATTGGCGAATAAACCACCCAACGACATCAACATCAGGCTTACGGTACAGTTACCACCAACA                                                                                         >  SRR4302543.7673490/1‑94 (MQ=60)
      GTAGGTTGCAACGGACACCCAATCAACAAGATCATTGGCGAATAAACCACCCAACGACATCAACATCAGGCTTACGGTACAGTTACCACCAACA                                                                                         >  SRR4302543.923352/1‑94 (MQ=60)
      GTAGGTTGCAACGGACACCCAATCAACAAGATCATTGGCGAATAAACCACCCAACGACATCAACATCAGGCTTACGGTACAGTTACCACCAACA                                                                                         >  SRR4302543.1775663/1‑94 (MQ=60)
       TAGGTTGCAACGGACACCCAATCAACAAGATCATTGGCGAATAAACCACCCAACGACATCAACATCAGGCTTACGGTACAGTTACCACCAACAA                                                                                        <  SRR4302543.398439/94‑1 (MQ=60)
        AGGTTGCAACGGACACCCAATCAACAAGATCATTGGCGAATAAACCACCCAACGACATCAACATCAGGCTTACGGTACAGTTACCACCAACAAA                                                                                       <  SRR4302543.3862411/94‑1 (MQ=60)
        AGGTTGCAACGGACACCCAATCAACAAGATCATTGGCGAATAAACCACCCAACGACATCAACATCAGGCTTACGGTACAGTTACCACCAACAAA                                                                                       >  SRR4302543.6972855/1‑94 (MQ=60)
        AGGTTGCAACGGACACCCAATCAACAAGATCATTGGCGAATAAACCACCCAACGACATCAACATCAGGCTTACGGTACAGTTACCACCAACAAA                                                                                       <  SRR4302543.4494128/94‑1 (MQ=60)
        AGGTTGCAACGGACACCCAATCAACAAGATCATTGGCGAATAAACCACCCAACGACATCAACAGCAGGCTTACGGTACAGTTACCACCAACAAA                                                                                       <  SRR4302543.1478755/94‑1 (MQ=60)
         GGTTGCAACGGACACCCAATCAACAAGATCATTGGCGAATAAACCACCCAACGACATCAACATCAGGCTTACGGTACAGTTACCACCAACAAAA                                                                                      <  SRR4302543.1480063/94‑1 (MQ=60)
           TTGCAACGGACACCCAATCAACAAGATCATTGGCGAATAAACCACCCAACGACATCAACATCAGGCTTACGGTACAGTTACCACCAACAAAAGT                                                                                    <  SRR4302543.4518517/94‑1 (MQ=60)
           TTGCAACGGACACCCAATCAACAAGATCATTGGCGAATAAACCACCCAACGACATCAACATCAGGCTTACGGTACAGTTACCACCAACAAAAGC                                                                                    >  SRR4302543.2443377/1‑94 (MQ=60)
            TGCAACGGACACCCAATCAACAAGATCATTGGCGAATAAACCACCCAACGACATCAACATCAGGCTTACGGTACAGTTACCACCAACAAAAGTC                                                                                   <  SRR4302543.5648095/94‑1 (MQ=60)
             tgAACGGACACCCAATCAACAAGATCATTGGCGAATAAACCACCCAACGACATCAACATCAGGCTTACGGTACAGTTACCACCAACAAAAGTCC                                                                                  <  SRR4302543.4467025/92‑1 (MQ=60)
              CAACGGACACCCAATCAACAAGATCATTGGCGAATAAACCACCCAACGACATCAACATCAGGCTTACGGTACAGTTACCACCAACAAAAGTCCT                                                                                 >  SRR4302543.7023109/1‑94 (MQ=60)
               AACGGACACCCAATCAACAAGATCATTGGCGAATAAACCACCCAACGACATCAACATCAGGCTTACGGTACAGTTACCACCAACAAAAGTCCTG                                                                                >  SRR4302543.6033620/1‑94 (MQ=60)
               AACGGACACCCAATCAACAAGATCATTGGCGAATAAACCACCCAACGACATCAACATCAGGCTTACGGTACAGTTACCACCAACAAAAGTCCTG                                                                                <  SRR4302543.4969080/94‑1 (MQ=60)
               AACGGACACCCAATCAACAAGATCATTGGCGAATAAACCACCCAACGACATCAACATCAGGCTTACGGTACAGTTACCACCAACAAAAGTCCTG                                                                                <  SRR4302543.6311838/94‑1 (MQ=60)
                 CGGACACCCAATCAACAAGATCATTGGCGAATAAACCACCCAACGACATCAACATCAGGCTTACGGTACAGTTACCACCAACAAAAGTCCTGAT                                                                              <  SRR4302543.3466694/94‑1 (MQ=60)
                 CGGACACCCAATCAACAAGATCATTGGCGAATAAACCACCCAACGACATCAACATCAGGCTTACGGTACAGTTACCACCAACAAAAGTCCTGAT                                                                              <  SRR4302543.5840056/94‑1 (MQ=60)
                 CGGACACCCAATCAACAAGATCATTGGCGAATAAACCACCCAACGACATCAACATCAGGCTTACGGTACAGTTACCACCAACAAAAGTCCTGAT                                                                              <  SRR4302543.6555270/94‑1 (MQ=60)
                 CGGACACCCAATCAACAAGATCATTGGCGAATAAACCACCCAACGACATCAACATCAGGCTTACGGTACAGTTACCACCAACAAAAGTCCTGAT                                                                              <  SRR4302543.118210/94‑1 (MQ=60)
                 CGGACACCCAATCAACAAGATCATTGGCGAATAAACCACCCAACGACATCAACATCAGGCTTACGGTACAGTTACCACCAACAAAAGTCCTGAT                                                                              <  SRR4302543.4453831/94‑1 (MQ=60)
                  GGACCCCCAATCAACAAGATCATTGGCGAATAAACCACCCAACGACATCAACATCAGGCTTACGGTACAGTTACCACCAACAAAAGTCCTGATG                                                                             <  SRR4302543.1936572/94‑1 (MQ=60)
                  GGACACCCAATCAACAAGATCATTGGCGAATAAACCACCCAACGACATCAACATCAGGCTTACGGTACAGTTACCACCAACAAAAGTCCTGATG                                                                             <  SRR4302543.7163060/94‑1 (MQ=60)
                  GGACACCCAATCAACAAGATCATTGGCGAATAAACCACCCAACGACATCAACATCAGGCTTACGGTACAGTTACCACCAACAAAAGTCCTGATG                                                                             <  SRR4302543.6211466/94‑1 (MQ=60)
                  GGACACCCAATCAACAAGATCATTGGCGAATAAACCACCCAACGACATCAACATCAGGCTTACGGTACAGTTACCACCAACAAAAGTCCTGATG                                                                             >  SRR4302543.179407/1‑94 (MQ=60)
                   GACACCCAATCAACAAGATCATTGGCGAATAAACCACCCAACGACATCAACATCAGGCTTACGGTACAGTTACCACCAACAAAAGTCCTGATGC                                                                            >  SRR4302543.686171/1‑94 (MQ=60)
                    ACACCCAATCAACAAGATCATTGGCGAATAAACCACCCAACGACATCAACATCAGGCTTACGGTACAGTTACCACCAACAAAAGTCCTGATGCC                                                                           <  SRR4302543.7220259/94‑1 (MQ=60)
                    ACACCCAATCAACAAGATCATTGGCGAATAAACCACCCAACGACATCAACATCAGGCTTACGGTACAGTTACCACCAACAAAAGTCCTGATGCC                                                                           <  SRR4302543.2665846/94‑1 (MQ=60)
                     CACCCAATCAACAAGATCATTGGCGAATAAACCACCCAACGACATCAACATCAGGCTTACGGTACAGTTACCACCAACAAAAGTCCTGATGCCA                                                                          >  SRR4302543.1180813/1‑94 (MQ=60)
                     CACCCAATCAACAAGATCATTGGCGAATAAACCACCCAACGACATCAACATCAGGCTTACGGTACAGTTACCACCAACAAAAGTCCTGATGCCA                                                                          >  SRR4302543.3882856/1‑94 (MQ=60)
                      ACCCAATCAACAAGATCATTGGCGAATAAACCACCCAACGACATCAACATCAGGCTTACGGTACAGTTACCACCAACAAAAGTCCTGATGCCAT                                                                         >  SRR4302543.6571477/1‑94 (MQ=60)
                      ACCCAATCAACAAGATCATTGGCGAATAAACCACCCAACGACATCAACATCAGGCTTACGGTACAGTTACCACCAACAAAAGTCCTGATGCCAT                                                                         <  SRR4302543.2686376/94‑1 (MQ=60)
                       CCCAATCAACAAGATCATTGGCGAATAAACCACCCAACGACATCAACATCAGGCTTACGGTACAGTTACCACCAACAAAAGTCCTGATGCCATT                                                                        <  SRR4302543.4419500/94‑1 (MQ=60)
                        CCAATCAACAAGATCATTGGCGAATAAACCACCCAACGACATCAACATCAGGCTTACGGTACAGTTACCACCAACAAAAGTCCTGATGCCATTA                                                                       >  SRR4302543.606986/1‑94 (MQ=60)
                         CAATCAACAAGATCATTGGCGAATAACCCACCCAACGACATCAACATCAGGCTTACGGTACAGTTACCACCAACAAAAGTCCTGATGCCATTAT                                                                      <  SRR4302543.6662538/94‑1 (MQ=60)
                          AATCAACAAGATCATTGGCGAATAAACCACCCAACGACATCAACATCAGGCTTACGGTACAGTTACCACCAACAAAAGTCCTGATGCCATTATT                                                                     <  SRR4302543.7212675/94‑1 (MQ=60)
                          AATCAACAAGATCATTGGCGAATAAACCACCCAACGACATCAACATCAGGCTTACGGTACAGTTACCACCAACAAAAGTCCTGATGCCATTATT                                                                     >  SRR4302543.4476990/1‑94 (MQ=60)
                          AATCAACAAGATCATTGGCGAATAAACCACCCAACGACATCAACATCAGGCTTACGGTACAGTTACCACCAACAAAAGTCCTGATGCCATTATT                                                                     <  SRR4302543.6023891/94‑1 (MQ=60)
                          AATCAACAAGATCATTGGCGAATAAACCACCCAACGACATCAACATCAGGCTTACGGTACAGTTACCACCAACAAAAGTCCTGATGCCATTATT                                                                     >  SRR4302543.2249624/1‑94 (MQ=60)
                          AATCAACAAGATCATTGGCGAATAAACCACCCAACGACATCAACATCAGGCTTACGGTACAGTTACCACCAACAAAAGTCCTGATGCCATTATT                                                                     <  SRR4302543.5419317/94‑1 (MQ=60)
                           ATCAACAAGATCATTGGCGAATAAACCACCCAACGACATCAACATCAGGCTTACGGTACAGTTACCACCAACAAAAGTCCTGATagagtggaga                                                                    >  SRR4302543.5301011/1‑84 (MQ=60)
                           ATCAACAAGATCATTGGCGAATAAACCACCCAACGACATCAACATCAGGCTTACGGTACAGTTACCACCAACAAAAGTCCTGATGCCATTATTT                                                                    >  SRR4302543.3657537/1‑94 (MQ=60)
                           ATCAACAAGATCATTGGCGAATAAACCACCCAACGACATCAACATCAGGCTTACGGTACAGTTACCACCAACAAAAGTCCTGATGCCATTATTT                                                                    <  SRR4302543.2019016/94‑1 (MQ=60)
                           ATCAACAAGATCATTGGCGAATAAACCACCCAACGACATCAACATCAGGCTTACGGTACAGTTACCACCAACAAAAGTCCTGATGCCATTATTT                                                                    <  SRR4302543.7159720/94‑1 (MQ=60)
                            TCAACAAGATCATTGGCGAATAAACCACCCAACGACATCAACATCAGGCTTACGGTACAGTTACCACCAACAAAAGTCCTGATGCCATTATTTA                                                                   <  SRR4302543.148282/94‑1 (MQ=60)
                            ACAACAAGATCATTGGCGAATAAACCACCCAACGACATCAACATCAGGCTTACGGTACAGTTACCACCAACAAAAGTCCTGATGCCATTATTTA                                                                   <  SRR4302543.2029621/94‑1 (MQ=60)
                             CAACAAGATCATTGGCGAATAAACCACCCAACGACATCAACATCAGGCTTACGGTACAGTTACCACCAACAAAAGTCCTGATGCCATTATTTAA                                                                  >  SRR4302543.6866893/1‑94 (MQ=60)
                             CAACAAGATCATTGGCGAATAAACCACCCAACGACATCAACATCAGGCTTACGGTACAGTTACCACCAACAAAAGTCCTGATGCCATTATTTAA                                                                  <  SRR4302543.5535555/94‑1 (MQ=60)
                             CAACAAGATCATTGGCGAATAAACCACCCAACGACATCAACATCAGGCTTACGGAACAGTTACACCCACCAAAAGCCCTAATGCCATTATTTAT                                                                  >  SRR4302543.5935493/1‑94 (MQ=60)
                             CAACAAGATCATTGGCGAATAAACCACCCAACGACATCAACATCAGGCGTACGGTACAGTTACCACCAACAAAAGGCCTGATGCCATTATTTAA                                                                  >  SRR4302543.645914/1‑94 (MQ=60)
                              AACAAGATCATTGGCGAATAAACCACCCAACGACATCAACATCAGGCTTACGGTACAGTTACCACCAACAAAAGTCCTGATGCCATTATTTAAT                                                                 <  SRR4302543.7913837/94‑1 (MQ=60)
                              AACAAGATCATTGGCGAATAAACCACCCAACGACATCAACATCAGGCTTACGGTACAGTTACCACCAACAAAAGTCCTGATGCCATTATTTAAT                                                                 <  SRR4302543.1632215/94‑1 (MQ=60)
                              AACAAGATCATTGGCGAATAAACCACCCAACGACATCAACATCAGGCTTACGGTACAGTTACCACCAACAAAAGTCCTGATGCCATTATTTAAT                                                                 >  SRR4302543.1910297/1‑94 (MQ=60)
                              AACAAGATCATTGGCGAATAAACCACCCAACGACATCAACATCAGGCTTACGGTACAGTTACCACCAACAAAAGTCCTGATGCCATTATTTAAT                                                                 >  SRR4302543.4075895/1‑94 (MQ=60)
                              AACAAGATCATTGGCGAATAAACCACCCAACGACATCAACATCAGGCTTACGGTACAGTTACCACCAACAAAAGTCCTGATGCCATTATTTAAT                                                                 >  SRR4302543.4756689/1‑94 (MQ=60)
                                CAAGATCATTGGCGAATAAACCACCCAACGACATCAACATCAGGCTTACGGTACAGTTACCACCAACAAAAGTCCTGATGCCATTATTTAATCC                                                               <  SRR4302543.4514926/94‑1 (MQ=60)
                                CAAGATCATTGGCGAATAAACCACCCAACGACATCAACATCAGGCTTACGGTACAGTTACCACCAACAAAAGTCCTGATGCCATTATTTAATCC                                                               <  SRR4302543.1951094/94‑1 (MQ=60)
                                CAAGATCATTGGCGAATAAACCACCCAACGACATCAACATCAGGCTTACGGTACAGTTACCACCAACAAAAGTCCTGATGCCATTATTTAATCC                                                               >  SRR4302543.5726328/1‑94 (MQ=60)
                                CAAGATCATTGGCGAATAAACCACCCAACGACATCAACATCAGGCTTACGGTACAGTTACCACCAACAAAAGTCCTGATGCCATTATTTAATCC                                                               <  SRR4302543.5046512/94‑1 (MQ=60)
                                 AAGATCATTGGCGAATAAACCACCCAACGACATCAACATCAGGCTTACGGTACAGTTACCACCAACAAAAGTCCTGATGCCATTATTTAATCCG                                                              <  SRR4302543.6268820/94‑1 (MQ=60)
                                 AAGATCATTGGCGAATAAACCACCCAACGACATCAACATCAGGCTTACGGTACAGTTACCACCAACAAAAGTCCTGATGCCATTATTTAATCCG                                                              >  SRR4302543.6077865/1‑94 (MQ=60)
                                 AAGATCATTGGCGAATAAACCACCCAACGACATCAACATCAGGCTTACGGTACAGTCACCACCAACAAAAGTCCTGATGCCATTATTTAATACG                                                              >  SRR4302543.6077866/1‑94 (MQ=60)
                                  AGATCATTGGCGAATAAACCACCCAACGACATCAACATCAGGCTTACGGTACAGTTACCACCAACAAAAGTCCTGATGCCATTATTTAATCCGT                                                             <  SRR4302543.572468/94‑1 (MQ=60)
                                    ATCATTGGCGAATAAACCCCCCAACGACATCAACATCAGGCTTACGGTACAGTTACCACCAACAAAAGTCCTGATGCCATTATTTAATCCGTCG                                                           <  SRR4302543.4732842/94‑1 (MQ=60)
                                    ATCATTGGCGAATAAACCACCCAACGACATCAACATCAGGCTTACGGTACAGTTACCACCAACAAAAGTCCTGATGCCATTATTTAATCCGTCG                                                           <  SRR4302543.6380776/94‑1 (MQ=60)
                                    ATCATTGGCGAATAAACCACCCAACGACATCAACATCAGGCTTACGGTACAGTTACCACCAACAAAAGTCCTGATGCCATTATTTAATCCGTCG                                                           >  SRR4302543.5016113/1‑94 (MQ=60)
                                    ATCATTGGCGAATAAACCACCCAACGACATCAACATCAGGCTTACGGTACAGTTACCACCAACAAAAGTCCTGATGCCATTATTTAATCCGTCG                                                           <  SRR4302543.4732841/94‑1 (MQ=60)
                                    ATCATTGGCGAATAAACCACCCAACGACATCAACATCAGGCTTACGGTACAGTTACCACCAACAAAAGTCCTGATGCCATTATTTAATCCGTCG                                                           <  SRR4302543.5028459/94‑1 (MQ=60)
                                    ATCATTGGCGAATAAACCACCCAACGACATCAACATCAGGCTTACGGTACAGTTACCACCAACAAAAGTCCTGATGCCATTATTTAATCCGTCG                                                           <  SRR4302543.1882869/94‑1 (MQ=60)
                                    ATCATTGGCGAATAAACCACCCAACGACATCAACATCAGGCTTACGGTACAGTTACCACCAACAAAAGTCCTGATGCCATTATTTAATCCGTCG                                                           >  SRR4302543.1270934/1‑94 (MQ=60)
                                     TCATTGGCGAATAAACCACCCAACGACATCAACATCAGGCTTACGGTACAGTTACCACCAACAAAAGTCCTGATGCCATTATTTAATCCGTCGG                                                          <  SRR4302543.2121325/94‑1 (MQ=60)
                                       ATTGGCGAATAAACCACCCAACGACATCAACATCAGGCTTACGGTACAGTTACCACCAACAAAAGTCCTGATGCCATTATTTAATCCGTCGGTA                                                        <  SRR4302543.1850280/94‑1 (MQ=60)
                                       ATTGGCGAATAAACCACCCAACGACATCAACATCAGGCTTACGGTACAGTTACCACCAACAAAAGTCCTGATGCCATTATTTAATCCGTCGGTA                                                        >  SRR4302543.1335733/1‑94 (MQ=60)
                                        TTGGCGAATAAACCACCCAACGACATCAACATCAGGCTTACGGTACAGTTACCACCAACAAAAGTCCTGATGCCATTATTTAATCCGTCGGTAA                                                       <  SRR4302543.2796482/94‑1 (MQ=60)
                                        TTGGCGAATAAACCACCCAACGACATCAACATCAGGCTTACGGTACAGTTACCACCAACAAAAGTCCTGATGCCATTATTTAATCCGTCGGTAA                                                       <  SRR4302543.2796483/94‑1 (MQ=60)
                                        TTGGCGAATAAACCACCCAACGACATCAACATCAGGCTTACGGTACAGTTACCACCAACAAAAGTCCTGATGCCATTATTTAATCCGTCGGTAA                                                       >  SRR4302543.4954720/1‑94 (MQ=60)
                                        TTGGCGAATAAACCACCCAACGACATCAACATCAGGCTTACGGTACAGTTACCACCAACAAAAGTCCTGATGCCATTATTTAATCCGTCGGTAA                                                       >  SRR4302543.3083068/1‑94 (MQ=60)
                                         TGGCGAATAAACCACCCAACGACATCAACATCAGGCTTACGGTACAGTTACCACCAACAAAAGTCCTGATGGCATTATTTAATCCGTCGGTAAT                                                      <  SRR4302543.3931611/94‑1 (MQ=60)
                                         TGGCGAATAAACCACCCAACGACATCAACATCAGGCTTACGGTACAGTTACCACCAACAAAAGTCCTGATGCCATTATTTAATCCGTCGGTAAT                                                      >  SRR4302543.3801268/1‑94 (MQ=60)
                                         TGGCGAATAAACCACCCAACGACATCAACATCAGGCTTACGGTACAGTTACCACCAACAAAAGTCCTGATGCCATTATTTAATCCGTCGGTAAT                                                      <  SRR4302543.3335728/94‑1 (MQ=60)
                                          GGCGAATAAACCACCCAACGACATCAACATCAGGCTTACGGTACAGTTACCACCAACAAAAGTCCTGATGCCATTATTTAATCCGTCGGTAATG                                                     <  SRR4302543.3149753/94‑1 (MQ=60)
                                            CGAATAAACCCCCCAACGACATCAACATCAGGCTTACGGTACAGTTACCACCAACAAAAGTCCTGATGCCATTATTTAATCCGTCGGTAATGAC                                                   <  SRR4302543.6294724/94‑1 (MQ=60)
                                            CGAATAAACCACCCAACGACATCAACATCAGGCTTACGGTACAGTTACCACCAACAAAAGTCCTGATGCCATTATTTAATCCGTCGGTAATGAC                                                   <  SRR4302543.5559698/94‑1 (MQ=60)
                                            CGAATAAACCACCCAACGACATCAACATCAGGCTTACGGTACAGTTACCACCAACAAAAGTCCTGATGCCATTATTTAATCCGTCGGTAATGAC                                                   <  SRR4302543.1073808/94‑1 (MQ=60)
                                             GAATAAACCACCCAACGACATCAACATCAGGCTTACGGTACAGTTACCACCAACAAAAGTCCTGATGCCATTATTTAATCCGTCGGTAATGACG                                                  <  SRR4302543.6230893/94‑1 (MQ=60)
                                             GAATAAACCACCCAACGACATCAACATCAGGCTTACGGTACAGTTACCACCAACAAAAGTCCTGATGCCATTATTTAATCCGTCGGTAATGACG                                                  >  SRR4302543.7556697/1‑94 (MQ=60)
                                             GAATAAACCACCCAACGACATCAACATCAGGCTTACGGTACAGTTACCACCAACAAAAGTCCTGATGCCATTATTTAATCCGTCGGTAATGACG                                                  <  SRR4302543.28808/94‑1 (MQ=60)
                                             GAATAAACCACCCAACGACATCAACATCAGGCTTACGGTACAGTTACCACCAACAAAAGTCCTGATGCCATTATTTAATCCGTCGGTAATGACG                                                  <  SRR4302543.7162073/94‑1 (MQ=60)
                                             GAATAAACCACCCAACGACATCAACATCAGGCTTACGGTACAGTTACCACCAACAAAAGTCCTGATGCCATTATTTAATCCGTCGGTAATGACG                                                  <  SRR4302543.4159603/94‑1 (MQ=60)
                                             GAATAAACCACCCAACGACATCAACATCAGGCTGCCGGGACAGTTACCACCAACAAAAGTCCTGATGCCATTATTTAATCCGTCGGTAATGACG                                                  >  SRR4302543.1393686/1‑94 (MQ=60)
                                               ATAAACCACCCAACGACATCAACATCAGGCTTACGGTACAGTTACCACCAACAAAAGTCCTGATGCCATTATTTAATCCGTCGGTAATGACGTC                                                <  SRR4302543.702030/94‑1 (MQ=60)
                                                TAAACCACCCAACGACATCAACATCAGGCTTACGGTACAGTTACCACCAACAAAAGTCCTGATGCCATTATTTAATCCGTCGGTAATGACGTCC                                               >  SRR4302543.3471362/1‑94 (MQ=60)
                                                TAAACCACCCAACGACATCAACATCAGGCTTACGGTACAGTTACCACCAACAAAAGTCCTGATGCCATTATTTAATCCGTCGGTAATGACGTCC                                               <  SRR4302543.6577866/94‑1 (MQ=60)
                                                 AAACCACCCAACGACATCAACATCAGGCTTACGGTACAGTTACCACCAACAAAAGTCCTGATGCCATTATTTAATCCGTCGGTAATGACGTCCT                                              <  SRR4302543.5269529/94‑1 (MQ=60)
                                                  AACCACCCAACGACATCAACATCAGGCTTACGGTACAGTTACCACCAACAAAAGTCCTGATGCCATTATTTAATCCGTCGGTAATGACGTCCTG                                             >  SRR4302543.6832694/1‑94 (MQ=60)
                                                  AACCACCCAACGACATCAACATCAGGCTTACGGTACAGTTACCACCAACAAAAGTCCTGATGCCATTATTTAATCCGTCGGTAATGACGTCCTG                                             <  SRR4302543.597909/94‑1 (MQ=60)
                                                  AACCACCCAACGACATCAACATCAGGCTTACGGTACAGTTACCACCAACAAAAGTCCTGATGCCATTATTTAATCCGTCGGTAATGACGTCCTG                                             >  SRR4302543.2060751/1‑94 (MQ=60)
                                                    CCACCCAACGACATCAACATCAGGCTTACGGTACAGTTACCACCAACAAAAGTCCTGATGCCATTATTTAATCCGTCGGTAATGACGTCCTGAT                                           >  SRR4302543.183929/1‑94 (MQ=60)
                                                    CCACCCAACGACATCAACATCAGGCTTACGGTACAGTTACCACCAACAAAAGTCCTGATGCCATTATTTAATCCGTCGGTAATGACGTCCTGAT                                           <  SRR4302543.6046726/94‑1 (MQ=60)
                                                    CCACCCAACGACATCAACATCAGGCTTACGGTACAGTTACCACCAACAAAAGTCCTGATGCCATTATTTAATCCGTCGGTAATGACGTCCTGAT                                           >  SRR4302543.5434865/1‑94 (MQ=60)
                                                    CCACCCAACGACATCAACATCAGGCTTACGGTACAGTTACCACCAACAAAAGTCCTGATGCCATTATTTAATCCGTCGGTAATGACGTCCTGAT                                           <  SRR4302543.3333476/94‑1 (MQ=60)
                                                     CACCCAACGACATCAACATCAGGCTTACGGTACAGTTACCACCAACAAAAGTCCTGATGCCATTATTTAATCCGTCGGTAATGACGTCCTGATT                                          <  SRR4302543.6382733/94‑1 (MQ=60)
                                                     CACCCAACGACATCAACATCAGGCTTACGGTACAGTTACCACCAACAAAAGTCCTGATGCCATTATTTAATCCGTCGGTAATGACGTCCTGATT                                          >  SRR4302543.6570692/1‑94 (MQ=60)
                                                     CACCCAACGACATCAACATCAGGCTTACGGTACAGTTACCACCAACAAAAGTCCTGATGCCATTATTTAATCCGTCGGTAATGACGTCCTGATT                                          <  SRR4302543.6349352/94‑1 (MQ=60)
                                                      ACCCAACGACATCAACATCAGGCTTACGGTACAGTTACCACCAACAAAAGTCCTGATGCCATTATTTAATCCGTCGGTAATGACGTCCTGATTG                                         <  SRR4302543.2602720/94‑1 (MQ=60)
                                                      ACCCAACGACATCAACATCAGGCTTACGGTACAGTTACCACCAACAAAAGTCCTGATGCCATTAGTTAATCCGTCGGCAATGACGTCCTGATTG                                         >  SRR4302543.6469497/1‑94 (MQ=60)
                                                       CCCAACGACATCAACATCAGGCTTACGGTACAGTTACCACCAACAAAAGTCCTGATGCCATTATTTAATCCGTCGGTAATGACGTCCTGATTGA                                        <  SRR4302543.1905698/94‑1 (MQ=60)
                                                        CCAACGACATCAACATCAGGCTTACGGTACAGTTACCACCAACAAAAGTCCTGATGCCATTATTTAATCCGTCGGTAATGACGTCCTGATTGAC                                       <  SRR4302543.5785020/94‑1 (MQ=60)
                                                        CCAACGACATCAACATCAGGCTTACGGTACAGTTACCACCAACAAAAGTCCTGATGCCATTATTTAATCCGTCGGTAATGACGTCCTGATTGAC                                       <  SRR4302543.5386992/94‑1 (MQ=60)
                                                        CCAACGACATCAACATCAGGCTTACGGTACAGTTACCACCAACAAAAGTCCTGATGCCATTATTTAATCCGTCGGTAATGACGTCCTGATTGAC                                       >  SRR4302543.3578647/1‑94 (MQ=60)
                                                        CCAACGACATCAACATCAGGCTTACGGTACAGTTACCACCAACAAAAGTCCTGATGCCATTATTTAATCCGTCGGTAATGACGTCCTGATTGAC                                       >  SRR4302543.2950695/1‑94 (MQ=60)
                                                         CAACGACATCAACATCAGGCTTACGGTACAGTTACCACCAACAAAAGTCCTGATGCCATTATTTAATCCGTCGGTAATGACGTCCTGATTGACG                                      <  SRR4302543.3802364/94‑1 (MQ=60)
                                                          AACGACATCAACATCAGGCTTACGGTACAGTTACCACCAACAAAAGTCCTGATGCCATTATTTAATCCGTCGGTAATGACGTCCTGATTGACGG                                     <  SRR4302543.3920525/94‑1 (MQ=60)
                                                          AACGACATCAACATCAGGCTTACGGTACAGTTACCACCAACAAAAGTCCTGATGCCATTATTTAATCCGTCGGTAATGACGTCCTGATTGACGG                                     <  SRR4302543.7647101/94‑1 (MQ=60)
                                                            CGACATCAACATCAGGCTTACGGTACAGTTACCACCAACAAAAGTCCTGATGCCATTATTTAATCCGTCGGTAATGACGTCCTGATTGACGGGG                                   >  SRR4302543.5545039/1‑94 (MQ=60)
                                                             GACATCAACATCAGGCTTACGGTACAGTTACCACCAACAAAAGTCCTGATGCCATTATTTAATCCGTCGGTAATGACGTCCTGATTGACTGGGT                                  >  SRR4302543.6849336/1‑94 (MQ=60)
                                                             GACATCAACATCAGGCTTACGGTACAGTTACCACCAACAAAAGTCCTGATGCCATTATTTAATCCGTCGGTAATGACGTCCTGATTGACGGGGT                                  >  SRR4302543.293217/1‑94 (MQ=60)
                                                             GACATCAACATCAGGCTTACGGTACAGTTACCACCAACAAAAGTCCTGATGCCATTATTTAATCCGTCGGTAATGACGTCCTGATTGACGGGGT                                  <  SRR4302543.4910358/94‑1 (MQ=60)
                                                              ACATCATCATCAGGCTTACGGTACAGTTACCACCAACAAAAGTCCTGATGCCATTATTTAATCCGTCGGTTATGACGCTCTGATTGACGGGGTC                                 >  SRR4302543.7082004/1‑94 (MQ=60)
                                                              ACATCAACATCAGGCTTTCGGTACAGTTACCACCAAGAAAAGTCCTGATGCCATTATTTAATCCGTCGGTAATGACGTCCTGATTGACGGGGTC                                 <  SRR4302543.6405794/94‑1 (MQ=60)
                                                              ACATCAACATCAGGCTTACGGTACAGTTACCACCAACAAAAGTCCTGATGCCATTATTTAATCCGTCGGTAATGACGTCCTGATTGACGGGGTC                                 >  SRR4302543.5950006/1‑94 (MQ=60)
                                                               CATCAACATCAGGCTTACGGTACAGTTACCACCAACAAAAGTCCTGATGCCATTATTTAATCCGTCGGTAATGACGTCCTGATTGACGGGGTCA                                <  SRR4302543.2105942/94‑1 (MQ=60)
                                                               CATCAACATCAGGCTTACGGTACAGTTACCACCAACAAAAGTCCTGATGCCATTATTTAATCCGTCGGTAATGACGTCCTGATTGACGGGGTCA                                >  SRR4302543.18384/1‑94 (MQ=60)
                                                                ATCAACATCAGGCTTACGGTACAGTTACCACCAACAAAAGTCCTGATGCCATTATTTAATCCGTCGGTAATGACGTGCTGATGGACGGGGTCAA                               >  SRR4302543.195394/1‑94 (MQ=60)
                                                                ATCAACATCAGGCTTACGGTACAGTTACCACCAACAAAAGTCCTGATGCCATTATTTAATCCGTCGGTAATGACGTCCTGATTGACGGGGTCAA                               >  SRR4302543.4381375/1‑94 (MQ=60)
                                                                ATCAACATCAGGCTTACGGTACAGTTACCACCAACAAAAGTCCTGATGCCATTATTTAATCCGTCGGTAATGACGTCCTGATTGACGGGGTCAA                               >  SRR4302543.195392/1‑94 (MQ=60)
                                                                ATCAACATCAGGCTTACGGTACAGTTACCACCAACAAAAGTCCTGATGCCATTATTTAATCCGTCGGTAATGACGTCCTGATTGACGGGGTCAA                               >  SRR4302543.5004539/1‑94 (MQ=60)
                                                                 TCAACATCAGGCTTACGGTACAGTTACCACCAACAAAAGTCCTGATGCCATTATTTAATCCGTCGGTAATGACGTCCTGATTGACGGGGTCAAG                              <  SRR4302543.5567533/94‑1 (MQ=60)
                                                                 TCAACATCAGGCTTACGGTACAGTTACCACCAACAAAAGTCCTGATGCCATTATTTAATCCGTCGGTAATGACGTCCTGATTGACGGGGTCAAG                              <  SRR4302543.121009/94‑1 (MQ=60)
                                                                 TCAACATCAGGCTTACGGTACAGTTACCACCAACAAAAGTCCTGATGCCATTATTTAATCCGTCGGTAATGACGTCCTGATTGACGGGGTCAAG                              >  SRR4302543.5614238/1‑94 (MQ=60)
                                                                 ACAACATCAGGCTTACGGTACAGTTACCACCAACAAAAGTCCTGATGCCATTATTTAATCCGTCGGTAATGACGTCCTGATTGACGGGGTCAAG                              <  SRR4302543.1441893/94‑1 (MQ=60)
                                                                   AACATCAGGCTTACGGTACAGTTACCACCAACAAAAGTCCTGATGCCATTATTTAATCCGTCGGTAATGACGTCCTGATTGACGGGGTCAAGAA                            <  SRR4302543.1799589/94‑1 (MQ=60)
                                                                   AACATCAGGCTTACGGTACAGTTACCACCAACAAAAGTCCTGATGCCATTATTTAATCCGTCGGTAATGACGTCCTGATTGACGGGGTCAAGAA                            >  SRR4302543.3398077/1‑94 (MQ=60)
                                                                   AACATCAGGCTTACGGTACAGTTACCACCAACAAAAGTCCTGATGCCATTATTTAATCCGTCGGTAATGACGTCCTGATTGACGGGGTCAAGAA                            >  SRR4302543.4311960/1‑94 (MQ=60)
                                                                    ACATCAGGCTTACGGTACAGTTACCACCAACAAACGTCCTGATGCCATTATTTAATCCGTCGGTAATGACGTCCTGATTGACGGGGTCAAGAAT                           <  SRR4302543.4877023/94‑1 (MQ=60)
                                                                    ACATCAGGCTTACGGTACAGTTACCACCAACAAAAGTCCTGATGCCATTATTTAATCCGTCGGTAATGACGTCCTGATTGACGGGGTCAAGAAT                           <  SRR4302543.4571532/94‑1 (MQ=60)
                                                                    ACATCAGGCTTACGGTACAGTTACCACCAACAAAAGTCCTGATGCCATTATTGAATCCGTCGGTAATGACGTCCTGATTGACGGGGTCAAGAAT                           <  SRR4302543.4571531/94‑1 (MQ=60)
                                                                     CATCAGGCTTACGGTACAGTTACCACCAACAAAAGTCCTGATGCCATTATTTAATCCGTCGGTAATGACGTCCTGATTGACGGGGTCAAGAATG                          <  SRR4302543.5217487/94‑1 (MQ=60)
                                                                     CATCAGGCTTACGGTACAGTTACCACCAACAAAAGTCCTGATGCCATTATTTAATCCGTCGGTAATGACGTCCTGATTGACGGGGTCAAGAATG                          <  SRR4302543.2127647/94‑1 (MQ=60)
                                                                      ATCAGGCTTACGGTACAGTTACCACCAACAAAAGTCCTGATGCCATTATTTAATCCGTCGGTAATGACGTCCTGATTGACGGGGTCAAGAATGA                         >  SRR4302543.2289926/1‑94 (MQ=60)
                                                                      ATCAGGCTTACGGTACAGTTACCACCAACAAAAGTCCTGATGCCATTATTTAATCCGTCGGTAATGACGTCCTGATTGACGGGGTCAAGAATGA                         >  SRR4302543.5740198/1‑94 (MQ=60)
                                                                         AGGCTTACGGTACAGTTACCACCAACAAAAGTCCTGATGCCATTATTTAATCCGTCGGTAATGACGTCCTGATTGACGGGGTCAAGAATGATGA                      >  SRR4302543.7187455/1‑94 (MQ=60)
                                                                         AGGCTTACGGTACAGTTACCACCAACAAAAGTCCTGATGCCATTATTTAATCCGTCGGTAATGACGTCCTGATTGACGGGGTCAAGAATGATGA                      >  SRR4302543.1157819/1‑94 (MQ=60)
                                                                          GGCTTACGGTACAGTTACCACCAACAAAAGTCCTGATGCCATTATTTAATCCGTCGGTAATGACGTCCTGATTGACGGGGTCAAGAATGATGAT                     <  SRR4302543.3493784/94‑1 (MQ=60)
                                                                          GGCTTACGGTACAGTTACCACCAACAAAAGTCCTGATGCCATTATTTAATCCGTCGGTAATGACGTCCTGATTGACGGGGTCAAGAATGATGAT                     <  SRR4302543.5697022/94‑1 (MQ=60)
                                                                          GGCTTACGGTACAGTTACCACCAACAAAAGTCCTGATGCCATTATTTAATCCGTCGGTAATGACGTCCTGATTGACGGGGTCAAGAATGATGAT                     <  SRR4302543.2791963/94‑1 (MQ=60)
                                                                          GGCTTACGGTACAGTTACCACCAACAAAAGTCCTGATGCCATTATTTAATCCGTCGGTAATGACGTCCTGATTGACGGGGTCAAGAATGATGAT                     <  SRR4302543.2302622/94‑1 (MQ=60)
                                                                          GGCTTACGGTACAGTTACCACCAACAAAAGTCCTGATGCCATTATTTAATCCGTCGGTAATGACGTCCTGATTGACGGGGTCAAGAATGATGAT                     <  SRR4302543.2532101/94‑1 (MQ=60)
                                                                           GCTTACGGTACAGTTACCACCAACAAAAGTCCTGATGCCATTATTTAATCCGTCGGTAATGACGTCCTGATTGACGGGGTCAAGAATGATGATG                    <  SRR4302543.1299504/94‑1 (MQ=60)
                                                                           GCTTACGGTACAGTTACCACCAACAAAAGTCCTGATGCCATTATTTAATCCGTCGGTAATGACGTCCTGATTGACGGGGTCAAGAATGATGATG                    <  SRR4302543.6902947/94‑1 (MQ=60)
                                                                           GCTTACGGTACAGTTACCACCAACAAAAGTCCTGATGCCATTATTTAATCCGTCGGTAATGACGTCCTGATTGACGGGGTCAAGAATGATGATG                    <  SRR4302543.6363613/94‑1 (MQ=60)
                                                                           GCTTACGGTACAGTTACCACCAACAAAAGTCCTGATGCCATTATTTAATCCGTCGGTAATGACGTCCTGATTGACGGGGTCAAGAATGATGATG                    <  SRR4302543.4359228/94‑1 (MQ=60)
                                                                           GCTTACGGTACAGTTACCACCAACAAAAGTCCTGATGCCATTATTTAATCCGTCGGTAATGACGTCCTGATTGACGGGGTCAAGAATGATGATG                    >  SRR4302543.4955719/1‑94 (MQ=60)
                                                                            CTTACGGTACAGTTACCACCAACAAAAGTCCTGATGCCATTATTTAATCCGTCGGTAATGACGTCCTGATTGACGGGGTCAAGAATGATGATGG                   >  SRR4302543.2647696/1‑94 (MQ=60)
                                                                            CTTACGGTACAGTTACCACCAACAAAAGTCCTGATGCCATTATTTAATCCGTCGGTAATGACGTCCTGATTGACGGGGTCAAGAATGATGATGG                   >  SRR4302543.428212/1‑94 (MQ=60)
                                                                            CTTACGGTACAGTTACCACCAACAAAAGTCCTGATGCCATTATTTAATCCGTCGGTAATGACGTCCTGATTGACGGGGTCAAGAATGATGATGG                   >  SRR4302543.7909/1‑94 (MQ=60)
                                                                            CTTACGGTACAGTTACCACCAACAAAAGTCCTGATGCCATTATTTAATCCGTCGGTAATGACGTCCTGATTGACGGGGTCAAGAATGATGATGG                   <  SRR4302543.2070801/94‑1 (MQ=60)
                                                                             TTACGGTACAGTTACCACCAACAAAAGTCCTGATGCCATTATTTAATCCGTCGGTAATGACGTCCTGATTGACGGGGTCAAGAATGATGATGGC                  <  SRR4302543.220347/94‑1 (MQ=60)
                                                                              TACGGTACAGTTACCACCAACAAAAGTCCTGATGCCATTATTTAATCCGTCGGTAATGACGTCCTGATTGACGGGGTCAAGAATGATGATGGCG                 >  SRR4302543.7555286/1‑94 (MQ=60)
                                                                              TACGGTACAGTTACCACCAACAAAAGTCCTGATGCCATTATTTAATCCGTCGGTAATGACGTCCTGATTGACGGGGTCAAGAATGATGATGGCG                 <  SRR4302543.5360981/94‑1 (MQ=60)
                                                                              TACGGTACAGTTACCACCAACAAAAGGCCTGATGCCATTATTTAATCCGTCGGTAATGACGTCCTGATTGACGGGGTCAAGAATGATGATGGCG                 <  SRR4302543.3316258/94‑1 (MQ=60)
                                                                               ACGGTACAGTTACCACCAACAAAAGTCCTGATGCCATTATTTAATCCGTCGGTAATGACGTCCTGATTGACGGGGTCAAGAATGATGATGGCGT                >  SRR4302543.1492309/1‑94 (MQ=60)
                                                                                CGGTACAGTTACCACCAACAAAAGTCCTGATGCCATTATTTAATCCGTCGGTAATGACGTCCTGATTGACGGGGTCAAGAATGATGATGGCGTC               >  SRR4302543.2200820/1‑94 (MQ=60)
                                                                                CGGTACAGTTACCACCAACAAAAGTCCTGATGCCATTATTTAATCCGTCGGTAATGACGTCCTGATTGACGGGGTCAAGAATGATGATGGCGTC               >  SRR4302543.4882754/1‑94 (MQ=60)
                                                                                 GGTACAGTTCCCACCAACAAAAGTCCTGAGGCCATTATTTAATCCGTCGGTAATGACGTCCTGATTGACGGGGTCAAGAATGATGATGGCGTCA              <  SRR4302543.4195147/94‑1 (MQ=60)
                                                                                 GGTACAGTTACCACCAACAAAAGTCCTGATGCCATTATTTAATCCGTCGGTAATGACGTCCTGATTGACGGGGTCAAGAATGATGATGGCGTCA              <  SRR4302543.4195146/94‑1 (MQ=60)
                                                                                  GTACAGTTACCACCAACAAAAGTCCTGATGCCATTATTTAATCTGTCGGAAATGACGTACTGATTGACGGGGTCAAGAATGATGATGGCGTCAT             >  SRR4302543.3522115/1‑94 (MQ=60)
                                                                                   TACAGTTACCACCAACAAAAGTCCTGATGCCATTATTTAATCCGTCGGTAATGACGTCCTGATTGACGGGGTCAAGAATGATGATGGCGTCATC            <  SRR4302543.5934968/94‑1 (MQ=60)
                                                                                    ACAGTTACCACCAACAAAAGTCCTGATGCCATTATTTAATCCGTCGGTAATGACGTCCTGATTGACGGGGTCAAGAATGATGATGGCGTCATCT           <  SRR4302543.7718718/94‑1 (MQ=60)
                                                                                      AGTTACCACCATCAAAAGTCCTGATGCCATTATTTAATCCGTCGGTAATGACGTCCTGATTGACGGGGTCAAGAATGATGATGGCGTCATCTTT         <  SRR4302543.563399/94‑1 (MQ=60)
                                                                                      AGTTACCACCAACAAAAGTCCTGATGCCATTATTTAATCCGTCGGTAATGACGTCCTGATTGACGGGGTCAAGAATGATGATGGCGTCATCTTT         >  SRR4302543.2757261/1‑94 (MQ=60)
                                                                                      AGTTACCACCAACAAAAGTCCTGATGCCATTATTTAATCCGTCGGTAATGACGTCCTGATTGACGGGGTCAAGAATGATGATGGCGTCATCTTT         >  SRR4302543.5295881/1‑94 (MQ=60)
                                                                                       GTTACCACCAACAAAAGTCCTGATGCCATTATTTAATCCGTCGGTAATGACGTCCTGATTGACGGGGTCAAGAATGATGATGGCGTCATCTTTC        >  SRR4302543.3384820/1‑94 (MQ=60)
                                                                                       GTTACCACCAACAAAAGTCCTGATGCCATTATTTAATCCGTCGGTAATGACGTCCTGATTGACGGGGTCAAGAATGATGATGGCGTCATCTTTC        >  SRR4302543.7801543/1‑94 (MQ=60)
                                                                                       GTTACCACCAACAAAAGTCCTGATGCCATTATTTAATCCGTCGGTAATGACGTCCTGATTGACGGGGTCAAGAATGATGATGGCGTCATCTTTC        >  SRR4302543.4685471/1‑94 (MQ=60)
                                                                                        TTACCACCAACAAAAGTCCTGATGCCATTATTTAATCCGTCGGTAATGACGTCCTGATTGACGGGGTCAAGAATGATGATGGCGTCATCTTTCA       <  SRR4302543.3794509/94‑1 (MQ=60)
                                                                                        TTACCACCAACAAAAGTCCTGATGCCATTATTTAATCCGTCGGTAATGACGTCCTGATTGACGGGGTCAAGAATGATGATGGCGTCATCTTTCA       >  SRR4302543.7367620/1‑94 (MQ=60)
                                                                                         TACCACCAACAAAAGTCCTGATGCCATTATTTAATCCGTCGGTAATGACGTCCTGATTGACGGGGTCAAGAATGATGATGGCGTCATCTTTCAT      <  SRR4302543.2299618/94‑1 (MQ=60)
                                                                                         TACCACCAACAAAAGTCCTGATGCCATTATTTAATCCGTCGGTAATGACGTCCTGATTGACGGGGTCAAGAATGATGATGGCGTCATCTTTCAT      <  SRR4302543.7465160/94‑1 (MQ=60)
                                                                                         TACCACCAACAAAAGTCCTGATGCCATTATTTAATCCGTCGGTAATGACGTCCTGATTGACGGGGTCAAGAATGATGATGGCGTCATCTTTCAT      <  SRR4302543.6702361/94‑1 (MQ=60)
                                                                                         TACCACCAACAAAAGTCCTGATGCCATTATTTAATCCGTCGGTAATGACGTCCTGATTGACGGGGTCAAGAATGATGATGGCGTCATCTTTCAT      <  SRR4302543.2709178/94‑1 (MQ=60)
                                                                                           CCACCAACAAAAGTCCTGATGCCATTATTTAATCCGTCGGTAATGACGTCCTGATTGACGGGGTCAAGAATGATGATGGCGTCATCTTTCATGC    <  SRR4302543.6493159/94‑1 (MQ=60)
                                                                                           CCACCAACAAAAGTCCTGATGCCATTATTTAATCCGTCGGTAATGACGTCCTGATTGACGGGGTCAAGAATGATGATGGCGTCATCTTTCATGC    <  SRR4302543.4917754/94‑1 (MQ=60)
                                                                                            CACCAACAAAAGTCCTGATGCCATTATTTAATCCGTCGGTAATGACGTCCTGATTGACGGGGTCAAGAATGATGATGGCGTCATCTTTCATGCG   <  SRR4302543.5792915/94‑1 (MQ=60)
                                                                                             ACCAACAAAAGTCCTGATGCCATTATTTAATCCGTCGGTAATGACGTCCTGATTGACGGGGTCAAGAATGATGATGGCGTCATCTTTCATGCGC  >  SRR4302543.7776665/1‑94 (MQ=60)
                                                                                             ACCAACAAAAGTCCTGATGCCATTATTTAATCCGTCGGTAATGACGTCCTGATTGACGGGGTCAAGAATGATGATGGCGTCATCTTTCATGCGC  >  SRR4302543.791357/1‑94 (MQ=60)
                                                                                             ACCAACAAAAGTCCTGATGCCATTATTTAATCCGTCGGTAATGACGTCCTGATTGACGGGGTCAAGAATGATGATGGCGTCATCTTTCATGCGC  <  SRR4302543.807013/94‑1 (MQ=60)
                                                                                             |                                                                                             
GGCCTGGTAGGTTGCAACGGACACCCAATCAACAAGATCATTGGCGAATAAACCACCCAACGACATCAACATCAGGCTTACGGTACAGTTACCGCCAACAAAAGTCCTGATGCCATTATTTAATCCGTCGGTAATGACGTCCTGATTGACGGGGTCAAGAATGATGATGGCGTCATCTTTCATGCGC  >  NC_000913/3572023‑3572209

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 7 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑