Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A1 F1 I1 R1 1696 279.3 15874187 97.8% 15524954 93.0

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 3,698,466 A→G N92S (AAC→AGC)  yhjV → putative transporter protein

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009133,698,4660AG99.2% 1157.6 / ‑3.8 369N92S (AAC→AGC) yhjVputative transporter protein
Reads supporting (aligned to +/- strand):  ref base A (1/2);  new base G (175/191);  total (176/193)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 376 total aligned reads displayed.

TGGGTAGTGCAGGACATTTATTTAAAAACCCTTTCTGAAAGCGATTCCTGTAATGACTACACCGATATTATCAGTCATTACCTGGGGAAGAAC‑TGGGGAATTTTCCTCGGGGTTATCTACTTTTTGATGATTATCCACGGGATTTTTATCTACTCTCTCTCCGTGGTTTTCGACAGCGCC  >  NC_000913/3698375‑3698554
                                                                                           |                                                                                         
 gggTAGTGCAGGACATTTATTTAAAAACCCTTTCTGAAAGCGATTCCTGTAATGACTACACCGATATTATCAGTCATTACCTGGGGAAGAGC‑t                                                                                        <  2:783019/93‑1 (MQ=255)
  ggTAGTGCAGGACATTTATTTAAAATCCCTTTCTGAAAGCGATTCCTGTAATGCCTACACCGATATTATCAGTCATTACCTGGGGAAGAGC‑Tg                                                                                       <  2:1802720/93‑1 (MQ=255)
  ggTAGTGCAGGACATTTATTTAAAAACCCTTTCTGAAAGCGATTCCTGTAATGACTACACCGATATTATCAGTCATTACCTGGGGAAGAGC‑Tg                                                                                       <  1:6549848/93‑1 (MQ=255)
   gTAGTGCAGGACATTTATTTAAAAACCCTTTCTGAAAGCGATTCCTGTAATGACTACACCGATATTATCAGTCATTACCTGGGGAAGAGC‑Tgg                                                                                      <  1:3446208/93‑1 (MQ=255)
    tAGTGCAGTACATTTATTAAAAAACCCTTTCTGAAAGCGATTCCTGTAATGACTACACCGATATTATCAGTCATTACCTGGGGAAGAGC‑Tggg                                                                                     <  2:3146369/93‑1 (MQ=255)
    tAGTGCAGGACATTTATTTAAAAACCCTTTCTGAAAGCGATTCCTGTAATGACTACACCGATATTATCAGTCATTACCTGGGGAAGAGC‑Tggg                                                                                     <  2:2113936/93‑1 (MQ=255)
    tAGTGCAGGACATTTATTTAAAAACCCTTTCTGAAAGCGATTCCTGTAATGACTACACCGATATTATCAGTCATTACCTGGGGAAGAGC‑Tggg                                                                                     <  1:7293550/93‑1 (MQ=255)
     aGTGCAGGACATTTATTTAAAAACCCTTTCTGAAAGCGATTCCTGTAATGACTACACCGATATTATCAGTCATTACCTGGGGAAGAGC‑Tgggg                                                                                    >  2:4347183/1‑93 (MQ=255)
      gTGCAGGACATTTATTTAAAAACCCTTTCTGAAAGCGATTCCTGTAATGACTACACCGATATTATCAGTCATTACCTGGGGAAGAGC‑TGGGGa                                                                                   <  1:5648936/93‑1 (MQ=255)
       tGCAGGACATTTATTTAAAAACCCTTTCTGAAAGCGATTCCTGTAATGACTACACCGATATTATCAGTCATTACCTGGGGAAGAGC‑TGGGGaa                                                                                  <  1:5983867/93‑1 (MQ=255)
         cAGGACATTTATTTAAAAACCCTTTCTGAAAGCGATTCCTGTAATGACTACACCGATATTATCAGTCATTACCTGGGGAAGAGC‑TGGGGAAtt                                                                                >  2:7698926/1‑93 (MQ=255)
         cAGGACATTTATTTAAAAACCCTTTCTGAAAGCGATTCCTGTAATGACTACACCGATATTATCAGTCATTACCTGGGGAAGAGC‑TGGGGAAtt                                                                                <  2:632646/93‑1 (MQ=255)
          aGGACATTTATTTAAAAACCCTTTCTGAAAGCGATTCCTGTAATGACCACACCGATATTATCAGTCATTACCTGGGGAAGAGC‑TGGGGAAttt                                                                               >  2:6249910/1‑93 (MQ=255)
          aGGACATTTATTTAAAAACCCTTTCTGAAAGCGATCCCTGTAATGACTACACCGATATTATCAGTCATTACCTGGGGAAGAGC‑TGGGGAAttt                                                                               >  1:2439932/1‑93 (MQ=255)
             aCATTTATTTAAAAACCCTTTCTGAAAGCTATTCCTGTAATGACTACACCGATATTATCAGTCATTACCTGGGGAAGAGC‑TGGGGAATTTTcc                                                                            <  2:2813864/93‑1 (MQ=255)
             aCATTTATTTAAAAACCCTTTCTGAAAGCGATTCCTGTAATGACTACACCGATATTATCAGTCATTACCTGGGGAAGAGC‑TGGGGAATTTTcc                                                                            <  2:6596086/93‑1 (MQ=255)
              cATTTATTTAAAAACCCTTTCTGAAAGCGATTCCTGTAATGACTACACCGATATTATCAGTCATTACCTGGGGAAGAGC‑TGGGGAATTTTCCt                                                                           >  1:3351376/1‑93 (MQ=255)
               atttatttAAAAACCCTTTCTGAAAGCGATTCCTGTAATGACTACACCGATATTATCAGTCATTACCTGGGGAAGAGC‑TGGGGAATTTTCCTc                                                                          <  2:44521/93‑1 (MQ=255)
                tttatttaAAAACCCTTTCTGAAAGCGATTCCTGTAATGACCACACCGATATTATCAGTCATTACCTGGGGAAGAGC‑TGGGGAATTTTCCTCg                                                                         <  1:7418570/93‑1 (MQ=255)
                 ttatttaAAAACCCTTTCTGAAAGCGATTCCTGTAATGACTACACCGATATTATCAGTCATTACCTGGGGAAGAGC‑TGGGGAATTTTCCTCgg                                                                        >  1:1192407/1‑93 (MQ=255)
                    tttaAAAACCCTTTCTGAAAGCGATTCCTGTAATGACTACACCGATATTATCAGTCATTACCTGGGGAAGAGC‑TGGGGAATTTTCCTCGGGGt                                                                     >  2:981594/1‑93 (MQ=255)
                    tttaAAAACCCTTTCTGAAAGCGATTCCTGTAATGACTACACCGATATTATCAGTCATTACCTGGGGAAGAGC‑TGGGGAATTTTCCTCGGGGt                                                                     >  1:5674283/1‑93 (MQ=255)
                     ttaAAAACCCTTTCTGAAAGCGATTCCTGTAATGACTACACCGATATTATCAGTCATTACCTGGGGAAGAGC‑TGGGGAATTTTCCTCGGGGtt                                                                    <  1:2231633/93‑1 (MQ=255)
                     ttaAAAACCCTTTCTGAAAGCGATTCCTGTAATGACTACACCGATATTATCAGTCATTACCTGGGGAAGAGC‑TGGGGAATTTTCCTCGGGGtt                                                                    <  2:246354/93‑1 (MQ=255)
                      taAAACCCCTTTCTGAAAGCGATTCCTGTAATGACTACACCTATATTATCAGTCATTACCTGGGGAAGAGC‑TGGGGAATTTTCCTCGGGGTTa                                                                   <  1:3224250/93‑1 (MQ=255)
                      taAAAACCCTTTCTGAAAGCGATTCCTGTAATGACTACACCGATATTATCAGTCATTACCTGGGGAAGAGC‑TGGGGAATTTTCCTCGGGGTTa                                                                   <  2:5352321/93‑1 (MQ=255)
                       aaaaaCCCTTTCTGAAAGCGATTCCTGTAATGACTACACCGATATTATCAGTCATTACCTGGGGAAGAGC‑TGGGGAATTTTCCTCGGGGTTAt                                                                  >  1:494594/1‑93 (MQ=255)
                        aaaaCCCTTTCTGAAAGCGATTCCTGTAATGACCACACCGATATTATCAGTCATCACCTGGGGAAGAGC‑TGGGGAATTTTCCTCGGGGTTATc                                                                 <  1:2576313/93‑1 (MQ=255)
                         aaaCCCTTTCTGAAAGCGATTCCTGTAATGACTACACCGATATTATCAGTCATTACCTGGGGAAGAGC‑TGGGGAATTTTCCTCGGGGTTATCt                                                                >  1:1330157/1‑93 (MQ=255)
                         aaaCCCTTTCTGAAAGCGATTCCTGTAATGACTACACCGATATTATCAGTCATTACCTGGGGAAGAGC‑TGGGGAATTTTCCTCGGGGTTATCt                                                                >  1:5441953/1‑93 (MQ=255)
                          aaCCCTTTCTGAAAGCGATTCCTGTAATGACTACACCGATATTATCAGTCATTACCTGGGGAAGAGC‑TGGGGAATTTTCCTCGGGGTTATCTa                                                               <  2:6380795/93‑1 (MQ=255)
                           aCCCTTTCTGAAAGCGATTCCTGTAATGACTACACCGATATTATCAGTCATTACCTGGGGAAGAGC‑TGGGGAATTTTCCTCGGGGTTATCTAc                                                              >  1:4426051/1‑93 (MQ=255)
                           aCCCTTTCTGAAAGCGATTCCTGTAATGACTACACCGATATTATCAGTCATTACCTGGGGAAGAGC‑TGGGGAATTTTCCTCGGGGTTATCTAc                                                              >  1:1671480/1‑93 (MQ=255)
                              cTTTCTGAAAGCGATTCCTGTAATGACTACACCGATATTATCAGTCATTACCTGGGGAAGAGC‑TGGGGAATTTTCCTCGGGGTTATCTACttt                                                           >  1:1039437/1‑93 (MQ=255)
                              cTTTCTGAAAGCGATTCCTGTAATGACTACACCGATATTATCAGTCATTACCTGGGGAAGAGC‑TGGGGAATTTTCCTCGGGGTTATCTACttt                                                           <  2:3466269/93‑1 (MQ=255)
                               tttCTGAAAGCGATTCCTGTAATGACTACACCGATATTATCAGTCATTACCTGGGGAAGAGC‑TGGGGAATTTTCCTCGGGGTTATCTACtttt                                                          <  2:476482/93‑1 (MQ=255)
                               tttCTGAAAGCGATTCCTGTAATGACTACACCGATATTATCAGTCATTACCTGGGGAAGAGC‑TGGGGAATTTTCCTCGGGGTTATCTACtttt                                                          >  2:5601083/1‑93 (MQ=255)
                                 tCTGAAAGCGATTCCTGTAATGACTACACCGATATTATCAGTCATTACCTGGGGAAGAGC‑TGGGGAATTTTCCTCGGGGTTATCTACTTTTtg                                                        >  1:6789034/1‑93 (MQ=255)
                                 tCTGAAAGCGATTCCTGTAATGACTACACCGATATTATCAGTCATTACCTGGGGAAGAAC‑TGGGGAATTTTCCTCGGGGTTATCTACTTTTtg                                                        >  2:5207775/1‑93 (MQ=255)
                                  cTGAAAGCGATTCCTGTAATGACTACACCGATATTATCAGTCATTACCTGGGGAAGAGC‑TGGGGAATTTTCCTCGGGGTTATCTACTTTTtga                                                       <  2:4000734/93‑1 (MQ=255)
                                   tGAAAGCGATTCCTGTAATGACTACACCGATATTATCAGTCATTACCTGGGGAAGAGC‑TGGGGAATTTTCCTCGGGGTTATCTACTTTTtgat                                                      >  2:6546545/1‑93 (MQ=255)
                                   tGAAAGCGATTCCTGTAATGACTACACCGATATTATCAGTCATTACCTGGGGAAGAGC‑TGGGGAATTTTCCTCGGGGTTATCTACTTTTtgat                                                      >  1:1770026/1‑93 (MQ=255)
                                    gAAAGCGATTCCTGTAATGACTACACCGATATTATCAGTCATTACCTGGGGAAGAGC‑TGGGGAATTTTCCTCGGGGTTATCTACTTTTtgatg                                                     >  2:7144431/1‑93 (MQ=255)
                                    gAAAGCGATTCCTGTAATGACTACACCGATATTATCAGTCATTACCTGGGGAAGAGC‑TGGGGAATTTTCCTCGGGGTTATCTACTTTTtgatg                                                     <  2:6087355/93‑1 (MQ=255)
                                    gAAAGCGATTCCTGTAATGACTACACCGATATTATCAGTCATTACCTGGGGAAGAGC‑TGGGGAATTTTCCTCGGGGTTATCTACTTTTtgatg                                                     >  2:1410669/1‑93 (MQ=255)
                                       aGCGATTCCTGTAATGACTACACCGATATTATCAGTCATTACCTGGGGAAGAGC‑TGGGGAATTTTCCTCGGGGTTATCTACTTTTTGATGAtt                                                  <  2:6679323/93‑1 (MQ=255)
                                        gCGATTCCTGTAATGACTACACCGATATTATCAGTCATTACCTGGGGAAGAGC‑TGGGGAATTTTCCTCGGGGTTATCTACTTTTTGATGATTa                                                 <  2:4081508/93‑1 (MQ=255)
                                         cGATTCCTGTAATGACTACACCGATATTATCAGTCATTACCTGGGGAAGAGC‑TGGGGAATTTTCCTCGGGGTTATCTACTTTTTGATGATTAt                                                <  1:3838209/93‑1 (MQ=255)
                                          gATTCCTGTAATGACTACACCGATATTATCAGTCATTACCTGGGGAAGAGC‑TGGGGAATTTTCCTCGGGGTTATCTACTTTTTGATGATTATc                                               <  2:7377065/93‑1 (MQ=255)
                                           aTTCCTGTAATGACTACACCGATATTATCAGTCATTACCTGGGGAAGAGC‑TGGGGAATTTTCCTCGGGGTTATCTACTTTTTGATGATTATcc                                              <  1:6265191/93‑1 (MQ=255)
                                            ttCCTGTAATGACTACACCGATATTATCAGTCATTACCTGGGGAAGAGC‑TGGGGAATTTTCCTCGGGGTTATCTACTTTTTGATGATTATCCa                                             >  2:5823001/1‑93 (MQ=255)
                                            ttCCTGTAATGACTACACCGATATTATCAGTCATTACCTGGGGAAGAGC‑TGGGGAATTTTCCTCGGGGTTATCTACTTTTTGATGATTATCCa                                             <  2:403383/93‑1 (MQ=255)
                                            ttCCTGTAATGACTACACCGATATTATCAGTCATTACCTGGGGAAGAGC‑TGGGGAATTTTCCTCGGGGTTATCTACTTTTTGATGATTATCCa                                             <  2:2288954/93‑1 (MQ=255)
                                            ttCCTGTAATGACTACACCGATATTATCAGTCATTACCTGGGGAAGAGC‑TGGGGAATTTTCCTCGGGGTTATCTACTTTTTGATGATTATCCa                                             >  2:6490715/1‑93 (MQ=255)
                                            ttCCTGTAATGACTACACCGATATTATCAGTCATTACCTGGGGAAGAGC‑TGGGGAATTTTCCTCGGGGTTATCTACTTTTTGATGATTATCCa                                             >  1:366863/1‑93 (MQ=255)
                                            ttCCTGTAATGACTACACCGATATTATCAGTCATTACCTGGGGAAGAGC‑TGGGGAATTTTCCTCGGGGTTATCTACTTTTTGATGATTATCCa                                             >  1:6440819/1‑93 (MQ=255)
                                            ttCCTGTAATGACTACACCGATATTATCAGTCATTACCTGGGGAAGAGC‑TGGGGAATTTTCCTCGGGGTTATCTACTTTTTGATGATTATCCa                                             >  2:1500708/1‑93 (MQ=255)
                                            ttCCTGTAATGACCACACCGATATTATCAGTCATTACCTGGGGAAGAGC‑TGGGGAATTTTCCTCGGGGTTATCTACTTTTTGATGATTATCCa                                             <  1:4085879/93‑1 (MQ=255)
                                            tgccTGTAATGACTACACCGATATTATCAGTCATTACCTGGGGAAGAGC‑TGGGGAATTTTCCTCGGGGTTATCTACTTTTTGATGATTATCCa                                             <  2:729845/91‑1 (MQ=255)
                                            tcccTGTAATGACTACACCGATATTATCAGTCATTACCTGGGGAAGAGC‑TGGGGAATTTTCCTCGGGGTTATCTACTTTTTGATGATTATCCa                                             <  1:3488039/91‑1 (MQ=255)
                                               cTGTAATGACTACACCGATATTATCAGTCATTACCTGGGGAAGAGC‑TGGGGAATTTTCCTCGGGGTTATCTACTTTTTGATGATTATCCACgg                                          >  2:2666685/1‑93 (MQ=255)
                                                tGTAATGACTACACCGATATTCTCAGTCATTACCTGGGGAAGAGC‑TGGGGAATTTTCCTCGGGGTTATCTACTTTTTGATGATTATCCACggg                                         >  2:7772772/1‑93 (MQ=255)
                                                tGTAATGACTACACCGATATTATCAGTCATTACCTGGGGAAGAGC‑TGGGGAATTTTCCTCGGGGTTATCTACTTTTTGATGATTATCCACggg                                         >  2:6869899/1‑93 (MQ=255)
                                                tGTAATGACTACACCGATATTATCAGTCATTACCTGGGGAAGAGC‑TGGGGAATTTTCCTCGGGGTTATCTACTTTTTGATGATTATCCACggg                                         >  1:4750451/1‑93 (MQ=255)
                                                 gTAATGACTACACCGATATTATCAGTCATTACCTGGGGAAGAGC‑TGGGGAATTTTCCTCGGGGTTATCTACTTTTTGATGATTATCCACGGGa                                        <  1:1444900/93‑1 (MQ=255)
                                                 gTAATGACTACACCGATATTATCAGTCATTACCTGGGGAAGAGC‑TGGGGAATTTTCCTCGGGGTTATCTACTTTTTGATGATTATCCACGGGa                                        <  2:104374/93‑1 (MQ=255)
                                                 gTAATGACTACACCGATATTATCAGTCATTACCTGGGGAAGAGC‑TGGGGAATTTTCCTCGGGGTTATCTACTTTTTGATGATTATCCACGGGa                                        <  1:5195335/93‑1 (MQ=255)
                                                 gTAATGACTACACCGATATTATCAGTCATTACCTGGGGAAGAGC‑TGGGGAATTTTCCTCGGGGTTATCTACTTTTTGATGATTATCCACGGGa                                        <  1:4465080/93‑1 (MQ=255)
                                                     tGACTACACCGATATTATCAGTCATTACCTGGGGAAGGGC‑TGGGGAATTTTCCTCGGGGTCATCTACTTTTTGATGATTATCCACGGGAtttt                                    >  1:2886586/1‑93 (MQ=255)
                                                     tGACTACACCGATATTATCAGTCATTACCTGGGGAAGAGC‑TGGGGAATTTTCCTCGGGGTTATCTACTTTTTGATGATTATCCACGGGAtttt                                    >  1:304765/1‑93 (MQ=255)
                                                       aCTACACCGATATTATCAGTCATTACCTGGGGAAGAGC‑TGGGGAATTTTCCTCGGGGTTATCTACTTTTTGATGATTATCCACGGGATTTTTa                                  >  1:7060909/1‑93 (MQ=255)
                                                        cTACACCGATATTATCAGTCATTACCTGGGG‑AGAGCTTGGGGATTTTTCTCCGGGTTTATTTA‑TTTTTTATTATTTTTCACCGGGtttttttt                                >  1:5262417/1‑90 (MQ=255)
                                                          acacCGATATGATCAGTCATTACCTGGGGAAGAGC‑TGGGGAATTTTCCTCGGGGTTATCTACTTTTTGATGATTATCCACGGGATTTTTATCt                               <  1:7751619/93‑1 (MQ=255)
                                                           cacCGATATTATCAGTCATTACCTGGGGAAGAGC‑TGGGGAATTTTCCTCGGGGTTATCTACTTTTTGATGATTATCCACGGGATTTTTATCTa                              >  1:2363116/1‑93 (MQ=255)
                                                           cacCGATATTATCAGTCATTACCTGGGGAAGAGC‑TGGGGAATTTTCCTCGGGGTTATCTACTTTTTGATGATTATCCACGGGATTTTTATCTa                              >  2:3288839/1‑93 (MQ=255)
                                                             ccGATATTATCAGTCATTACCTGGGGAAGAGC‑TGGGGAATTTTCCTCGGGGTTATCTACTTTTTGATGATTATCCACGGGATTTTTATCTAct                            <  2:3800167/93‑1 (MQ=255)
                                                             ccGATATTATCAGTCATTACCTGGGGAAGAGC‑TGGGGAATTTTCCTCGGGGTTATCTACTTTTTGATGATTATCCACGGGATTTTTATCTAct                            >  2:4740482/1‑93 (MQ=255)
                                                              cGATATTATCAGTCATTACCTGGGGAAGAGC‑TGGGGAATTTTCCTCGGGGTTATCTACTTTTTGATGATTATCCACGGGATTTTTATCTActc                           >  2:3380803/1‑93 (MQ=255)
                                                               gATATTATCAGTCATTACCTGGGGAAGAGC‑TGGGGAATTTTCCTCGGGGTTATCTACTTTTTGATGATTATCCACGGGATTTTTATCTActct                          >  2:2219652/1‑93 (MQ=255)
                                                                atatTATCAGTCATTACCTGGGGAAGAGC‑TGGGGAATTTTCCTCGGGGTTATCTACTTTTTGATGATTATCCACGGGATTTTTATCTActctc                         <  1:1880691/93‑1 (MQ=255)
                                                                 tattatCAGTCATTACCTGGGGAAGAGC‑TGGGGAATTTTCCTCGGGGTTATCTACTTTTTGATGATTATCCACGGGATTTTTATCTActctct                        >  2:1892992/1‑93 (MQ=255)
                                                                 tattatCAGTCATTACCTGGGGAAGAGC‑TGGGGAATTTTCCTCGGGGTTATCTACTTTTTGATGATTATCCACGGGATTTTTATCTActctct                        <  2:7053543/93‑1 (MQ=255)
                                                                  attatCAGTCATTACCTGGGGAAGAGC‑TGGGGAATTTTCCTCGGGGTTATCTACTTTTTGATGATTATCCACGGGATTTTTATCTActctctc                       >  2:5465772/1‑93 (MQ=255)
                                                                  attatCAGTCATTACCTGGGGAAGAGC‑TGGGGAATTTTCCTCGGGGTTATCTACTTTTTGATGATTATCCACGGGATTTTTATCTActctctc                       <  2:3618182/93‑1 (MQ=255)
                                                                   ttatCAGTCATTACCTGGGGAAGAGC‑TGGGGAATTTTCCTCGGGGTTATCTACTTTTTGATGATTATCCACGGGATTTTTATCTActctctct                      >  2:81133/1‑93 (MQ=255)
                                                                     atCAGTCATTACCTGGGGAAGAGC‑TGGGGAATTTTCCTCGGGGTTATCTACTTTTTGATGATTATCCACGGGATTTTTATCTACTCTCTCTcc                    <  1:4552837/93‑1 (MQ=255)
                                                                      tCAGTCATTACCTGGGGAAGAGC‑TGGGGAATTTTCCTCGGGGTTATCTACTTTTTGATGATTATCCACGGGATTTTTATCTACTCTCTCTCCg                   >  2:4547646/1‑93 (MQ=255)
                                                                      tCAGTCATTACCTGGGGAAGAGC‑TGGGGAATTTTCCTCGGGGTTATCTACTTTTTGATGATTATCCACGGGATTTTTATCTACTCTCTCTCCg                   >  1:5843993/1‑93 (MQ=255)
                                                                       cAGTCATTACCTGGGGAAGAGC‑TGGGGAATTTTCCTCGGGGTTATCTACTTTTTGATGATTATCCACGGGATTTTTATCTACTCTCTCTCCGt                  <  1:1998981/93‑1 (MQ=255)
                                                                         gTCATTACCTGGGGAAGAGC‑TGGGGAATTTTCCTCGGGGTTATCTACTTTTTGATGATTATCCACGGGATTTTTATCTACTCTCTCTCCGTgg                >  2:1589489/1‑93 (MQ=255)
                                                                           cATTACCTGGGGAAGAGC‑TGGGGAATTTTCCTCGGGGTTATCTACTTTTTGATGATTATCCACGGGATTTTTATCTACTCTCTCTCCGTGGtt              <  2:6051242/93‑1 (MQ=255)
                                                                            aTTACCTGGGGAAGAGC‑TGGGGAATTTTCCTCGGGGTTATCTACTTTTTGATGATTATCCACGGGATTTTTATCTACTCTCTCTCCGTGGttt             >  1:5708719/1‑93 (MQ=255)
                                                                            aTTACCTGGGGAAGAGC‑TGGGGAATTTTCCTCGGGGTTATCTACTTTTTGATGATTATCCACGGGATTTTTATCTACTCTCTCTCCGTGGttt             <  1:4227094/93‑1 (MQ=255)
                                                                             ttACCTGGGGAAGAGC‑TGGGGAATTTTCCTCGGGGTTATCTACTTTTTGATGATTATCCACGGGATTTTTATCTACTCTCTCTCCGTGGtttt            <  2:2944346/93‑1 (MQ=255)
                                                                              tACCTGGGGAAGAGC‑TGGGGAATTTTCCTCGGGGTTATCTACTTTTTGATGATTATCCACGGGATTTTTATCTACTCTCTCTCCGTGGTTTTc           >  1:6136487/1‑93 (MQ=255)
                                                                               aCCTGGGGAAGAGC‑TGGGGAATTTTCCTCGGGGTTATCTACTTTTTGATGATTATCCACGGGATTTTTATCTACTCTCTCTCCGTGGTTTTCg          <  1:844007/93‑1 (MQ=255)
                                                                                ccTGGGGAAGAGC‑TGGGGAATTTTCCTCGGGGTTATCTACTTTTTGATGATTATCCACGGGATTTTTATCTACTCTCTCTCCGTGGTTTTCGa         >  1:3128950/1‑93 (MQ=255)
                                                                                 cTGGGGAAGAGC‑TGGGGAATTTTCCTCGGGGTTATCTACTTTTTGATGATTATCCACGGGATTTTTATCTACTCTCTCTCCGTGGTTTTCGAc        >  2:7514415/1‑93 (MQ=255)
                                                                                 cTGGGGAAGAGC‑TGGGGAATTTTCCTCGGGGTTATCTACTTTTTGATGATTATCCACGGGATTTTTATCTACTCTATCTCCGTGGTTTTCGAc        >  1:7643089/1‑93 (MQ=255)
                                                                                   ggggAAGAGC‑TGGGGAATTTTCCTCGGGGTTATCTACTTTTTGATGATTATCCACGGGATTTTTATCTACTCTCTCTCCGTGGTTTTCGACAg      <  1:3944680/93‑1 (MQ=255)
                                                                                           |                                                                                         
TGGGTAGTGCAGGACATTTATTTAAAAACCCTTTCTGAAAGCGATTCCTGTAATGACTACACCGATATTATCAGTCATTACCTGGGGAAGAAC‑TGGGGAATTTTCCTCGGGGTTATCTACTTTTTGATGATTATCCACGGGATTTTTATCTACTCTCTCTCCGTGGTTTTCGACAGCGCC  >  NC_000913/3698375‑3698554

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

BRESEQ :: bam2aln output
CCTGGGTAGTGCAGGACATTTATTTAAAAACCCTTTCTGAAAGCGATTCCTGTAATGACTACACCGATATTATCAGTCATTACCTGGGGAAGAACTGGGGAATTTTCCTCGGGGTTATCTACTTTTTGATGATTATCCACGGGATTTTTATCTACTCTCTCTCCGTGGTTTTCGACAGCGCCTCGTA  >  NC_000913/3698373‑3698559
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CCTGGGTAGTGCAGGACATTTATTTAAAAACCCTTTCTGAAAGCGATTCCTGTAATGACTACACCGATATTATCAGTCATTACCTGGGGAAGAG                                                                                               >  SRR4302543.7375477/1‑94 (MQ=60)
CCTGGGTAGTGCAGGACATTTATTTAAAAACCCTTTCTGAAAGCGATTCCTGTAATGACTACACCGATATTATCAGTCATTACCTGGGGAAGAG                                                                                               <  SRR4302543.7722264/94‑1 (MQ=60)
CCTGGGTAGTGCAGGACATTTATTTAAAAACCCTTTCTGAAAGCGATTCCTGTAATGACTACACCGATATTATCAGTCATTACCTGGGGAAGAG                                                                                               >  SRR4302543.602561/1‑94 (MQ=60)
 CTGGGTAGTGCAGGACATTTATTTAAAAACCCTTTCTGAAAGCGATTCCTGTAATGACTACACCGATATTATCAGTCATTACCTGGGGAAGAGC                                                                                              >  SRR4302543.200621/1‑94 (MQ=60)
 CTGGGTAGTGCAGGACATTTATTTAAAAACCCTTTCTGAAAGCGATTCCTGTAATGACTACACCGATATTATCAGTCATTACCTGGGGAAGAGC                                                                                              >  SRR4302543.739309/1‑94 (MQ=60)
 CTGGGTAGTGCAGGACATTTATTTAAAAACCCTTTCTGAAAGCGATTCCTGTAATGACTACACCGATATTATCAGTCATTACCTGGGGAAGAGC                                                                                              <  SRR4302543.6272658/94‑1 (MQ=60)
 CTGGGTAGTGCAGGACATTTATTTAAAAACCCTTTCTGAAAGCGATTCCTGTAATGACTACACCGATATTATCAGTCATTACCTGGGGAAGAGC                                                                                              >  SRR4302543.3030638/1‑94 (MQ=60)
  TGGGTAGTGCAGGACATTTATTTAAAAACCCTTTCTGAAAGCGATTCCTGTAATGACTACACCGATATTATCAGTCATTACCTGGGGAAGAACT                                                                                             <  SRR4302543.3444156/94‑1 (MQ=60)
   GGGTAGTGCAGGACATTTATTTAAAAACCCTTTCTGAAAGCGATTCCTGTAATGACTACACCGATATTATCAGTCATTACCTGGGGAAGAGCTG                                                                                            >  SRR4302543.1553707/1‑94 (MQ=60)
    GGTAGTGCAGGACATTTATTTAAAAACCCTTTCTGAAAGCGATTCCTGTAATGACTACACCGATATTATCAGTCATTACCTGGGGAAGAGCTGG                                                                                           <  SRR4302543.6611496/94‑1 (MQ=60)
     GTAGTGCAGGACATTTATTTAAAAACCCTTTCTGAAAGCGATTCCTGTAATGACTACACCGATATTATCAGTCATTACCTGGGGAAGAGCTGGG                                                                                          <  SRR4302543.3477066/94‑1 (MQ=60)
     GTAGTGCAGGACATTTATTTAAAAACCCTTTCTGAAAGCGATTCCTGTAATGACTACACCGATATTATCAGTCATTACCTGGGGAAGAGCTGGG                                                                                          <  SRR4302543.7281775/94‑1 (MQ=60)
      TAGTGCAGGACATTTATTTAAAAACCCTTTCTGAAAGCGATTCCTGTAATGACTACACCGATATTATCAGTCATTACCTGGGGAAGAGCTGGGG                                                                                         <  SRR4302543.2468531/94‑1 (MQ=60)
      TAGTGCAGGACATTTATTTAAAAACCCTTTCTGAAAGCGATTCCTGTAATGACTACACCGATATTATCAGTCATTACCTGGGGAAGAGCTGGGG                                                                                         <  SRR4302543.1799590/94‑1 (MQ=60)
      TAGTGCAGGACATTTATTTAAAAACCCTTTCTGAAAGCGATTCCTGTAATGACTACACCGATATTATCAGTCATTACCTGGGGAAGAGCTGGGG                                                                                         <  SRR4302543.7363935/94‑1 (MQ=60)
      TAGTGCAGGACATTTATTTAAAAACCCTTTCTGAAAGCGATTCCTGTAATGACTACACCGATATTATCAGTCATTACCTGGGGAAGAGCTGGGG                                                                                         <  SRR4302543.890201/94‑1 (MQ=60)
       AGTGCAGGACATTTATTTAAAAACCCTTTCTGAAAGCGATTCCTGTAATGACTACACCGATATTATCAGTCATTACCTGGGGAAGAGCTGGGGA                                                                                        <  SRR4302543.7351283/94‑1 (MQ=60)
        GTGCAGGACATTTATTTAAAAACCCTTTCTGAAAGCGATTCCTGTAATGACTACACCGATATTATCAGTCATTACCTGGGGAAGAGCTGGGGAA                                                                                       <  SRR4302543.5700433/94‑1 (MQ=60)
         TGCAGGACATTTATTTAAAAACCCTTTCTGAAAGCGATTCCTGTAATGACTACACCGATATTATCAGTCATTACCTGGGGAAGAGCTGGGGAAT                                                                                      <  SRR4302543.6038700/94‑1 (MQ=60)
         TGCAGGACATTTATTTAAAAACCCTTTCTGAAAGCGATTCCTGTAATGACTACACCGATATTATCAGTCATTACCTGGGGAAGAGCTGGGGAAT                                                                                      >  SRR4302543.2340117/1‑94 (MQ=60)
         TGCAGGACATTTATTTAAAAACCCTTTCTGAAAGCGATTCCTGTAATGACTACACCGATATTATCAGTCATTACCTGGGGAAGAGCTGGGGAAT                                                                                      <  SRR4302543.6194751/94‑1 (MQ=60)
         TGCAGGACATTTATTTAAAAACCCTTTCTGAAAGCGATTCCTGTAATGACTACACCGATATTATCAGTCATTACCTGGGGAAGAGCTGGGGAAT                                                                                      >  SRR4302543.5643663/1‑94 (MQ=60)
           CAGGACATTTATTTAAAAACCCTTTCTGAAAGCGATTCCTGTAATGACTACACCGATATTATCAGTCATTACCTGGGGAAGAGCTGGGGAATTT                                                                                    >  SRR4302543.5986993/1‑94 (MQ=60)
           CAGGACATTTATTTAAAAACCCTTTCTGAAAGCGATTCCTGTAATGACTACACCGATATTATCAGTCATTACCTGGGGAAGAGCTGGGGAATTT                                                                                    <  SRR4302543.5855790/94‑1 (MQ=60)
           CAGGACATTTATTTAAAAACCCTTTCTGAAAGCGATTCCTGTAATGACTACACCGATATTATCAGTCATTACCTGGGGAAGAGCTGGGGAATTT                                                                                    <  SRR4302543.3686576/94‑1 (MQ=60)
           CAGGACATTTATTTAAAAACCCTTTCTGAAAGCGATCCCTGTAATGACTACACCGATATTATCAGTCATTACCTGGGGAAGAGCTGGGGAATTT                                                                                    >  SRR4302543.2461931/1‑94 (MQ=60)
           CAGGACATTTATTTAAAAACCCTTACTGAAAGCGATTCCTGTAATGACTACACCGATATTATCAGTCATTACCTGGGGAAGAGCTGGGGAATTT                                                                                    <  SRR4302543.8003657/94‑1 (MQ=60)
            AGGACATTTATTTAAAAACCCTTTCTGAAAGCGATTCCTGTAATGACTACACCGATATTATCAGTCATTACCTGGGGAAGAGCTGGGGAATTTT                                                                                   >  SRR4302543.399889/1‑94 (MQ=60)
            AGGACATTTATTTAAAAACCCTTTCTGAAAGCGATTCCTGTAATGACTACACCGATATTATCAGTCATTACCTGGGGAAGAGCTGGGGAATTTT                                                                                   >  SRR4302543.531607/1‑94 (MQ=60)
            AGGACATTTATTTAAAAACCCTTTCTGAAAGCGATTCCTGTAATGACTACACCGATATTATCAGTCATTACCTGGGGAAGAGCTGGGGAATTTT                                                                                   >  SRR4302543.4364507/1‑94 (MQ=60)
            AGGACATTTATTTAAAAACCCTTTCTGAAAGCGATTCCTGTAATGACTACACCGATATTATCAGTCATTACCTGGGGAAGAGCTGGGGAATTTT                                                                                   <  SRR4302543.4760683/94‑1 (MQ=60)
             GGACATTTATTTAAAAACCCTTTCTGAAAGCGATTCCTGTAATGACTACACCGATATTATCAGTCATTACCTGGGGAAGAGCTGGGGAATTTTC                                                                                  <  SRR4302543.5563683/94‑1 (MQ=60)
             GGACATTTATTTAAAAACCCTTTCTGAAAGCGATTCCTGTAATGACTACACCGATATTATCAGTCATTACCTGGGGAAGAGCTGGGGAATTTTC                                                                                  >  SRR4302543.3204082/1‑94 (MQ=60)
               ACATTTATTTAAAAACCCTTTCTGAAAGCGATTCCTGTAATGACTACACCGATATTATCAGTCATTACCTGGGGAAGAGCTGGGGAATTTTCCT                                                                                >  SRR4302543.3381546/1‑94 (MQ=60)
                CATTTATTTAAAAACCCTTTCTGAAAGCGATTCCTGTAATGACTACACCGATATTATCAGTCATTACCTGGGGAAGAGCTGGGGAATTTTCCTC                                                                               <  SRR4302543.5305284/94‑1 (MQ=60)
                CATTTATTTAAAAACCCTTTCTGAAAGCGATTCCTGTAATGACTACACCGATATTATCAGTCATTACCTGGGGAAGAGCTGGGGAATTTTCCTC                                                                               <  SRR4302543.7796511/94‑1 (MQ=60)
                CATTTATTTAAAAACCCTTTCTGAAAGCGATTCCTGTAATGACTACACCGATATTATCAGTCATTACCTGGGGAAGAGCTGGGGAATTTTCCTC                                                                               >  SRR4302543.2384891/1‑94 (MQ=60)
                 ATTTATTTAAAAGCCCTATCTGAAAGCGATTCCTGTAATGACTACACCGATATTATCAGTCATTACCTGGGGAAGAGCTGGGGAATTTTCCTCG                                                                              <  SRR4302543.2061522/94‑1 (MQ=60)
                 ATTTATTTAAAAACCCTTTCTGAAAGCGATTCCTGTAATGACTACACCGATATTATCAGTCATTACCTGGGGAAGAGCTGGGGAATTTTCCTCG                                                                              >  SRR4302543.1651743/1‑94 (MQ=60)
                 ATTTATTTAAAAACCCTTTCTGAAAGCGATTCCTGTAATGACTACACCGATATTATCAGTCATTACCTGGGGAAGAGCTGGGGAATTTTCCTCG                                                                              <  SRR4302543.334590/94‑1 (MQ=60)
                 ATTTATTTAAAAACCCTTTCTGAAAGCGATTCCTGTAATGACTACACCGATATTATCAGTCATTACCTGGGGAAGAGCTGGGGAATTTTCCTCG                                                                              <  SRR4302543.375850/94‑1 (MQ=60)
                  TTTATTTAAAAACCCTTTCTGAAAGCGATTCCTGTAATGACTACACCGATATTATCAGTCATTACCTGGGGAAGAGCTGGGGAATTTTCCTCGG                                                                             >  SRR4302543.1203161/1‑94 (MQ=60)
                  TTTATTTAAAAACCCTTTCTGAAAGCGATTCCTGTAATGACTACACCGATATTATCAGTCATTACCTGGGGAAGAGCTGGGGAATTTTCCTCGG                                                                             <  SRR4302543.253921/94‑1 (MQ=60)
                  TTTATTTAAAAACCCTTTCTGAAAGCGATTCCTGTAATGACCACACCGATATTATCAGTCATTACCTGGGGAAGAGCTGGGGAATTTTCCTCGG                                                                             <  SRR4302543.7489731/94‑1 (MQ=60)
                   TTATTTAAAAACCCTTTCTGAAAGCGATTCCTGTAATGACTACACCGATATTATCAGTCATTACCTGGGGAAGAGCTGGGGAATTTTCCTCGGG                                                                            <  SRR4302543.3997252/94‑1 (MQ=60)
                   TTATTTAAAAACCCTTTCTGAAAGCGATTCCTGTAATGACTACACCGATATTATCAGTCATTACCTGGGGAAGAGCTGGGGAATTTTCCTCGGG                                                                            <  SRR4302543.3129646/94‑1 (MQ=60)
                   TTATTTAAAAACCCTTTCTGAAAGCGATTCCTGTAATGACTACACCGATATTATCAGTCATTACCTGGGGAAGAGCTGGGGAATTTTCCTCGGG                                                                            <  SRR4302543.5738846/94‑1 (MQ=60)
                    TATTTAAAAACCCTTTCTGAAAGCGATTCCTGTAATGACTACACCGATATTATCAGTCATTACCTGGGGAAGAGCTGGGGAATTTTCCTCGGGG                                                                           >  SRR4302543.6634252/1‑94 (MQ=60)
                     ATTTAAAAACCCTTTCTGAAAGCGATTCCTGTAATGACTACACCGATATTATCAGTCATTACCTGGGGAAGAGCTGGGGAATTTTCCTCGGGGT                                                                          <  SRR4302543.3480232/94‑1 (MQ=60)
                     ATTTAAAAACCCTTTCTGAAAGCGATTCCTGTAATGACTACACCGATATTATCAGTCATTACCTGGGGAAGAGCTGGGGAATTTTCCTCGGGGT                                                                          >  SRR4302543.796883/1‑94 (MQ=60)
                     ATTTAAAAACCCTTTCTGAAAGCGATTCCTGTAATGACTACACCGATATTATCAGTCATTACCTGGGGAAGAGCTGGGGAATTTTCCTCGGGGT                                                                          <  SRR4302543.2174130/94‑1 (MQ=60)
                     ATTTAAAAACCCTTTCTGAAAGCGATTCCTGTAATGACTACACCGATATTATCAGTCATTACCTGGGGAAGAGCTGGGGAATTTTCCTCGGGGT                                                                          >  SRR4302543.5726081/1‑94 (MQ=60)
                      TTTAAAAACCCTTTCTGAAAGCGATTCCTGTAATGACTACACCGATATTATCAGTCATTACCTGGGGAAGAGCTGGGGAATTTTCCTCGGGGTT                                                                         <  SRR4302543.6637624/94‑1 (MQ=60)
                      TTTAAAAACCCTTTCTGAAAGCGATTCCTGTAATGACTACACCGATATTATCAGTCATTACCTGGGGAAGAGCTGGGGAATTTTCCTCGGGGTT                                                                         <  SRR4302543.7484963/94‑1 (MQ=60)
                       TTAAAAACCCTTTCTGAAAGCGATTCCTGTAATGACTACACCGATATTATCAGTCATTACCTGGGGAAGAGCTGGGGAATTTTCCTCGGGGTTA                                                                        >  SRR4302543.7424808/1‑94 (MQ=60)
                       TTAAAAACCCTTTCTGAAAGCGATTCCTGTAATGACTACACCGATATTATCAGTCATTACCTGGGGAAGAGCTGGGGAATTTTCCTCGGGGTTA                                                                        <  SRR4302543.2251805/94‑1 (MQ=60)
                       TTAAAAACCCTTTCTGAAAGCGATTCCTGTAATGACTACACCGATATTATCAGTCATTACCTGGGGAAGAGCTGGGGAATTTTCCTCGGGGTTA                                                                        <  SRR4302543.7609099/94‑1 (MQ=60)
                        TAAAACCCCTTTCTGAAAGCGATTCCTGTAATGACTACACCTATATTATCAGTCATTACCTGGGGAAGAGCTGGGGAATTTTCCTCGGGGTTAT                                                                       <  SRR4302543.3253394/94‑1 (MQ=60)
                        TAAAAACCCTTTCTGAAAGCGATTCCTGTAATGACTACACCGATATTATCAGTCATTACCTGGGGAAGAGCTGGGGAATTTTCCTCGGGGTTAT                                                                       >  SRR4302543.3148256/1‑94 (MQ=60)
                        TAAAAACCCTTTCTGAAAGCGATTCCTGTAATGACTACACCGATATTATCAGTCATTACCTGGGGAAGAGCTGGGGAATTTTCCTCGGGGTTAT                                                                       <  SRR4302543.5853648/94‑1 (MQ=60)
                        TAAAAACCCTTTCTGAAAGCGATTCCTGTAATGACTACACCGATATTATCAGTCATTACCTGGGGAAGAGCTGGGGAATTTTCCTCGGGGTTAT                                                                       <  SRR4302543.115303/94‑1 (MQ=60)
                        TAAAAACCCTTTCTGAAAGCGATTCCTGTAATGACTACACCGATATTATCAGTCATTACCTGGGGAAGAGCTGGGGAATTTTCCTCGGGGTTAT                                                                       <  SRR4302543.6024449/94‑1 (MQ=60)
                        TAAAAACCCTTTCTGAAAGCGATTCCTGTAATGACTACACCGATATTATCAGTCATTACCTGGGGAAGAGCTGGGGAATTTTCCTCGGGGTTAT                                                                       >  SRR4302543.499169/1‑94 (MQ=60)
                        TAAAAACCCTTTCTGAAAGCGATTCCTGTAATGACTACACCGATATTATCAGTCATTACCTGGGGAAGAGCTGGGGAATTTTCCTCGGGGTTAT                                                                       >  SRR4302543.6134455/1‑94 (MQ=60)
                         AAAAACCCTTTCTGAAAGCGATTCCTGTAATGACTACACCGATATTATCAGTCATTACCTGGGGAAGAGCTGGGGAATTTTCCTCGGGGTTATC                                                                      <  SRR4302543.1840114/94‑1 (MQ=60)
                         AAAAACCCTTTCTGAAAGCGATTCCTGTAATGACTACACCGATATTATCAGTCATTACCTGGGGAAGAGCTGGGGAATTTTCCTCGGGGTTATC                                                                      >  SRR4302543.6108521/1‑94 (MQ=60)
                         AAAAACCCTTTCTGAAAGCGATTCCTGTAATGACTACACCGATATTATCAGTCATTACCTGGGGAAGAGCTGGGGAATTTTCCTCGGGGTTATC                                                                      >  SRR4302543.5976965/1‑94 (MQ=60)
                          AAAACCCTTTCTGAAAGCGATTCCTGTAATGACTACACCGATATTATCAGTCATTACCTGGGGAAGAGCTGGGGAATTTTCCTCGGGGTTATCT                                                                     >  SRR4302543.1342016/1‑94 (MQ=60)
                          AAAACCCTTTCTGAAAGCGATTCCTGTAATGACTACACCGATATTATCAGTCATTACCTGGGGAAGAGCTGGGGAATTTTCCTCGGGGTTATCT                                                                     >  SRR4302543.5491352/1‑94 (MQ=60)
                          AAAACCCTTTCTGAAAGCGATTCCTGTAATGACTACACCGATATTATCAGTCATTACCTGGGGAAGAGCTGGGGAATTTTCCTCGGGGTTATCT                                                                     <  SRR4302543.132802/94‑1 (MQ=60)
                          AAAACCCTTTCTGAAAGCGATTCCTGTAATGACCACACCGATATTATCAGTCATCACCTGGGGAAGAGCTGGGGAATTTTCCTCGGGGTTATCT                                                                     <  SRR4302543.2599792/94‑1 (MQ=60)
                          AAAACCCTTTCTGAAAGCGACTCCTGTAATGACTACACCGATATTATCAGTCATTACCTGGGGAAGAGCTGGGGAATTTTCCTCGGGGTTATCT                                                                     >  SRR4302543.1342015/1‑94 (MQ=60)
                           AAACCCTTTCTGAAAGCGATTCCTGTAATGACTACACCGATATTATCAGTCATTACCTGGGGAAGAGCTGGGGAATTTTCCTCGGGGTTATCTA                                                                    >  SRR4302543.6643807/1‑94 (MQ=60)
                            AACCCTTTCTGAAAGCGATTCCTGTAATGACTACACCGATATTATCAGTCATTACCTGGGGAAGAGCTGGGGAATTTTCCTCGGGGTTATCTAC                                                                   >  SRR4302543.4133038/1‑94 (MQ=60)
                            AACCCTTTCTGAAAGCGATTCCTGTAATGACTACACCGATATTATCAGTCATTACCTGGGGAAGAGCTGGGGAATTTTCCTCGGGGTTATCTAC                                                                   >  SRR4302543.4466154/1‑94 (MQ=60)
                            AACCCTTTCTGAAAGCGATTCCTGTAATGACTACACCGATATTATCAGTCATTACCTGGGGAAGAGCTGGGGAATTTTCCTCGGGGTTATCTAC                                                                   <  SRR4302543.1122767/94‑1 (MQ=60)
                            AACCCTTTCTGAAAGCGATTCCTGTAATGACTACACCGATATTATCAGTCATTACCTGGGGAAGAGCTGGGGAATTTTCCTCGGGGTTATCTAC                                                                   <  SRR4302543.214650/94‑1 (MQ=60)
                            AACCCTTTCTGAAAGCGATTCCTGTAATGACTACACCGATATTATCAGTCATTACCTGGGGAAGAGCTGGGGAATTTTCCTCGGGGTTATCTAC                                                                   >  SRR4302543.1686463/1‑94 (MQ=60)
                             ACCCTTTCTGAAAGCGATTCCTGTAATGACTACACCGATATTATCAGTCATTACCTGGGGAAGAGCTGGGGAATTTTCCTCGGGGTTATCTACT                                                                  >  SRR4302543.4115058/1‑94 (MQ=60)
                               CCTTTCTGAAAGCGATTCCTGTAATGACTACACCGATATTATCAGTCATTACCTGGGGAAGAGCTGGGGAATTTTCCTCGGGGTTATCTACTTT                                                                <  SRR4302543.2002405/94‑1 (MQ=60)
                               CCTTTCTGAAAGCGATTCCTGTAATGACTACACCGATATTATCAGTCATTACCTGGGGAAGAGCTGGGGAATTTTCCTCGGGGTTATCTACTTT                                                                <  SRR4302543.4471924/94‑1 (MQ=60)
                               CCTTTCTGAAAGCGATTCCTGTAATGACTACACCGATATTATCAGTCATTACCTGGGGAAGAGCTGGGGAATTTTCCTCGGGGTTATCTACTTT                                                                >  SRR4302543.1048689/1‑94 (MQ=60)
                                CTTTCTGAAAGCGATTCCTGTAATGACTACACCGATATTATCAGTCATTACCTGGGGAAGAGCTGGGGAATTTTCCTCGGGGTTATCTACTTTT                                                               >  SRR4302543.303765/1‑94 (MQ=60)
                                 TTTCTGAAAGCGATTCCTGTAATGACTATACCGATATTATCAGTCATTACCTGGGGAAGAGCTGGGGAATTTTCCTCGGGGTTATCTACTTTTT                                                              <  SRR4302543.4823658/94‑1 (MQ=60)
                                  TTCTGAAAGCGATTCCTGTAATGACTACACCGATATTATCAGTCATTACCTGGGGAAGAGCTGGGGAATTTTCCTCGGGGTTATCTACTTTTTG                                                             >  SRR4302543.6853148/1‑94 (MQ=60)
                                    CTGAAAGCGATTCCTGTAATGACTACACCGATATTATCAGTCATTACCTGGGGAAGAGCTGGGGAATTTTCCTCGGGGTTATCTACTTTTTGAT                                                           >  SRR4302543.4914884/1‑94 (MQ=60)
                                    CTGAAAGCGATTCCTGTAATGACTACACCGATATTATCAGTCATTACCTGGGGAAGAGCTGGGGAATTTTCCTCGGGGTTATCTACTTTTTGAT                                                           >  SRR4302543.1785853/1‑94 (MQ=60)
                                    CTGAAAGCGATTCCTGTAATGACTACACCGATATTATCAGTCATTACCTGGGGAAGAGCTGGGGAATTTTCCTCGGGGTTATCTACTTTTTGAT                                                           >  SRR4302543.6339672/1‑94 (MQ=60)
                                    CTGAAAGCGATTCCTGTAATGACTACACCGATATTATCAGTCATTACCTGGGGAAGAGCTGGGGAATTTTCCTCGGGGTTATCTACTTTTTGAC                                                           >  SRR4302543.227426/1‑94 (MQ=60)
                                     TGAAAGCGATTCCTGTAATGACTACACCGATATTATCAGTCATTACCTGGGGAAGAGCTGGGGAATTTTCCTCGGGGTTATCTACTTTTTGATG                                                          <  SRR4302543.459810/94‑1 (MQ=60)
                                     TGAAAGCGATTCCTGTAATGACTACACCGATATTATCAGTCATTACCTGGGGAAGAGCTGGGGAATTTTCCTCGGGGTTATCTACTTTTTGATG                                                          <  SRR4302543.4764815/94‑1 (MQ=60)
                                          GCGATTCCTGTAATGACTACACCGATATTATCAGTCATTACCTGGGGAAGAGCTGGGGAATTTTCCTCGGGGTTATCTACTTTTTGATGATTAT                                                     <  SRR4302543.2604031/94‑1 (MQ=60)
                                          GCGATTCCTGTAATGACTACACCGATATTATCAGTCATTACCTGGGGAAGAGCTGGGGAATTTTCCTCGGGGTTATCTACTTTTTGATGATTAT                                                     <  SRR4302543.4503059/94‑1 (MQ=60)
                                           CGATTCCTGTAATGACTACACCGATATTATCAGTCATTACCTGGGGAAGAGCTGGGGAATTTTCCTCGGGGTTATCTACTTTTTGATGATTATC                                                    <  SRR4302543.6466353/94‑1 (MQ=60)
                                           CGATTCCTGTAATGACTACACCGATATTATCAGTCATTACCTGGGGAAGAGCTGGGGAATTTTCCTCGGGGTTATCTACTTTTTGATGATTATC                                                    <  SRR4302543.3872080/94‑1 (MQ=60)
                                            GATTCCTGTAATGACTACACCGATATTATCAGTCATTACCTGGGGAAGAGCTGGGGAATTTTCCTCGGGGTTATCTACTTTTTGATGATTATCC                                                   >  SRR4302543.5412362/1‑94 (MQ=60)
                                            GATTCCTGTAATGACTACACCGATATTATCAGTCATTACCTGGGGAAGAGCTGGGGAATTTTCCTCGGGGTTATCTACTTTTTGATGATTATCC                                                   <  SRR4302543.4952071/94‑1 (MQ=60)
                                             ATTCCTGTAATGACTACACCGATATTATCAGTCATTACCTGGGGAAGAGCTGGGGCATTTTCCTCGGGGTTATCTACTTTTTGATGATTATCCA                                                  >  SRR4302543.4190904/1‑94 (MQ=60)
                                             ATTCCTGTAATGACTACACCGATATTATCAGTCATTACCTGGGGAAGAGCTGGGGAATTTTCCTCGGGGTTATCTACTTTTTGATGATTATCCA                                                  >  SRR4302543.370252/1‑94 (MQ=60)
                                             ATTCCTGTAATGACTACACCGATATTATCAGTCATTACCTGGGGAAGAGCTGGGGAATTTTCCTCGGGGTTATCTACTTTTTGATGATTATCCA                                                  >  SRR4302543.571710/1‑94 (MQ=60)
                                             ATTCCTGTAATGACTACACCGATATTATCAGTCATTACCTGGGGAAGAGCTGGGGAATTTTCCTCGGGGTTATCTACTTTTTGATGATTATCCA                                                  <  SRR4302543.6324266/94‑1 (MQ=60)
                                             ATTCCTGTAATGACTACACCGATATTATCAGTCATTACCTGGGGAAGAGCTGGGGAATTTTCCTCGGGGTTATCTACTTTTTGATGATTATCCA                                                  >  SRR4302543.6501498/1‑94 (MQ=60)
                                             ATTCCTGTAATGACTACACCGATATTATCAGTCATTACCTGGGGAAGAGCTGGGGAATTTTCCTCGGGGTTATCTACTTTTTGATGATTATCCA                                                  >  SRR4302543.5496363/1‑94 (MQ=60)
                                             ATTCCTGTAATGACTACACCGATATTATCAGTCAGTACCTGGGGAAGAGCTCGGGGATTTTCCTCTGGCTTATCTAGTTTTTGATGATTATCCA                                                  >  SRR4302543.625156/1‑94 (MQ=60)
                                              TTCCTGTAATGACTACACCGATATTATCAGTCATTACCTGGGGAAGAGCTGGGGAATTTTCCTCGGGGTTATCTACTTTTTGATGATTATCCAC                                                 <  SRR4302543.5056641/94‑1 (MQ=60)
                                              TTCCTGTAATGACTACACCGATATTATCAGTCATTACCTGGGGAAGAGCTGGGGAATTTTCCTCGGGGTTATCTACTTTTTGATGATTATCCAC                                                 <  SRR4302543.396375/94‑1 (MQ=60)
                                              TTCCTGTAATGACTACACCGATATTATCAGTCATTACCTGGGGAAGAGCTGGGGAATTTTCCTCGGGGTTATCTACTTTTTGATGATTATCCAC                                                 >  SRR4302543.7624413/1‑94 (MQ=60)
                                              TTCCTGTAATGACTACACCGATATTATCAGTCATTACCTGGGGAAGAGCTGGGGAATTTTCCTCGGGGTTATCTACTTTTTGATGATTATCCAC                                                 <  SRR4302543.1374689/94‑1 (MQ=60)
                                              TTCCTGTAATGACCACACCGATATTATCAGTCATTACCTGGGGAAGAGCTGGGGAATTTTCCTCGGGGTTATCTACTTTTTGATGATTATCCAC                                                 <  SRR4302543.4122515/94‑1 (MQ=60)
                                              TCCCTGTAATGACTACACCGATATTATCAGTCATTACCTGGGGAAGAGCTGGGGAATTTTCCTCGGGGTTATCTACTTTTTGATGATTATCCAC                                                 <  SRR4302543.3519267/94‑1 (MQ=60)
                                               TCCCGTAATGACTACACCGATATTATCAGTCATTACCTGGGGAAGAGCTGGGGAATTTTCCTCGGGGTTATCTACTTTTTGATGATTATCCACG                                                <  SRR4302543.3485698/94‑1 (MQ=60)
                                                 CTGTAATGACTACACCGATATTATCAGTCATTACGTGGGGAAGAGCTGGGGAATTTTCCTCGGGGTTATCTACTTTTTGATGATTATCCACGGG                                              <  SRR4302543.2975664/94‑1 (MQ=60)
                                                 CTGTAATGACTACACCGATATTATCAGTCATTACCTGGGGAAGAGCTGGGGAATTTTCCTCGGGGTTATCTACTTTTTGATGATTATCCACGGG                                              >  SRR4302543.4793874/1‑94 (MQ=60)
                                                 CTGTAATGACTACACCGATATTATCAGTCATTACCTGGGGAAGAGCTGGGGAATTTTCCTCGGGGTTATCTACTTTTTGATGATTATCCACGGG                                              <  SRR4302543.4334382/94‑1 (MQ=60)
                                                 CTGTAATGACTACACCGATATTATCAGTCATTACCTGGGGAAGAGCTGGGGAATTTTCCTCGGGGTTATCTACTTTTTGATGATTATCCACGGG                                              <  SRR4302543.7414935/94‑1 (MQ=60)
                                                 CTGTAATGACTACACCGATATTATCAGTCATTACCTGGGGAAGAGCTAGGGAATTTTCCTCGGGGTTATCTACTTTTTGATGATTATCCACGGG                                              <  SRR4302543.1442882/94‑1 (MQ=60)
                                                   GTAATGACTACACCGATATTATCAGTCATTACCTGGGGAAGAGCTGGGGAATTTTCCTCGGGGTTATCTACTTTTTGATGATTATCCACGGGAT                                            >  SRR4302543.4560557/1‑94 (MQ=60)
                                                   GTAATGACTACACCGATATTATCAGTCATTACCTGGGGAAGAGCTGGGGAATTTTCCTCGGGGTTATCTACTTTTTGATGATTATCCACGGGAT                                            <  SRR4302543.4505553/94‑1 (MQ=60)
                                                   GTAATGACTACACCGATATTATCAGTCATTACCTGGGGAAGAGCTGGGGAATTTTCCTCGGGGTTATCTACTTTTTGATGATTATCCACGGGAT                                            <  SRR4302543.1457951/94‑1 (MQ=60)
                                                   GTAATGACTACACCGATATTATCAGTCATTACCTGGGGAAGAGCTGGGGAATTTTCCTCGGGGTTATCTACTTTTTGATGATTATCCACGGGAT                                            <  SRR4302543.5242179/94‑1 (MQ=60)
                                                   GTAATGACTACACCGATATTATCAGTCATTACCTGGGGAAGAGCTGGGGAATTTTCCTCGGGGTTATCTACTTTTTGATGATTATCCACGGGAT                                            >  SRR4302543.7534855/1‑94 (MQ=60)
                                                    TAATGACTACACCGATATTATCAGTCATTACCTGGGGAAGAGCTGGGGAATTTTCCTCGGGGTTATCTACTTTTTGATGATTATCCACGGGATT                                           <  SRR4302543.2455452/94‑1 (MQ=60)
                                                    TAATGACTACACCGATATTATCAGTCATTACCTGGGGAAGAGCTGGGGAATTTTCCTCGGGGTTATCTACTTTTTGATGATTATCCACGGGATT                                           <  SRR4302543.3276277/94‑1 (MQ=60)
                                                     AATGACTACACCGATATTATCAGTCATTACCTGGGGAAGAGCTGGGGAATTTTCCTCGGGGTTATCTACTTTTTGATGATTATCCACGGGATTT                                          <  SRR4302543.3084343/94‑1 (MQ=60)
                                                      ATGACTACACCGATATTATCAGTCATTACCTGGGGAAGGGCTGGGGAATTTTCCTCGGGGTCATCTACTTTTTGATGATTATCCACGGGATTTT                                         >  SRR4302543.2912851/1‑94 (MQ=60)
                                                      ATGACTACACCGATATTATCAGTCATTACCTGGGGAAGAGCTGGGGAATTTTCCTCGGGGTTATCTACTTTTTGATGATTATCCACGGGATTTT                                         >  SRR4302543.2202095/1‑94 (MQ=60)
                                                      ATGACTACACCGATATTATCAGTCATTACCTGGGGAAGAGCTGGGGAATTTTCCTCGGGGTTATCTACTTTTTGATGATTATCCACGGGATTTT                                         >  SRR4302543.307517/1‑94 (MQ=60)
                                                      ATGACTACACCGATATTATCAGTCATTACCTGGGGAAGAGCTGGGGAATTTTCCTCGGGGTTATCTACTTTTTGATGATTATCCACGGGATTTT                                         <  SRR4302543.5042291/94‑1 (MQ=60)
                                                       TGACTACACCGATATTATCAGTCATTACCTGGGGAAGAGCTGGGGAATTTTCCTCGGGGTTATCTACTTTTTGATGATTATCCACGGGATTTTT                                        <  SRR4302543.2846437/94‑1 (MQ=60)
                                                       TGACTACACCGATATTATCAGTCATTACCTGGGGAAGAGCTGGGGAATTTTCCTCGGGGTTATCTACTTTTTGATGATTATCCACGGGATTTTT                                        >  SRR4302543.1352989/1‑94 (MQ=60)
                                                        GACTACACCGATATTATCAGTCATTACCTGGGGAAGAGCTGGGGAATTTTCCTCGGGGTTATCTACTTTTTGATGATTATCCACGGGATTTTTA                                       >  SRR4302543.7129441/1‑94 (MQ=60)
                                                         ACTACACCGATATTATCAGTCATTACCTGGGGAAGAGCTGGGGAATTTTCCTCGGGGTTATCTACTTTTTGATGATTATCCACGGGATTTTTAT                                      <  SRR4302543.4582748/94‑1 (MQ=60)
                                                          CTACACCGATATTATCAGTCATTACCTGGGGAAGAGCTGGGGAATTTTCCTCGGGGTTATCTACTTTTTGATGATTATCCACGGGATTTTTATC                                     >  SRR4302543.5843206/1‑94 (MQ=60)
                                                          CTACACCGATATTATCAGTCATTACCTGGGGAAGAGCTGGGGAATTTTCCTCGGGGTTATCTACTTTTTGATGATTATCCACGGGATTTTTATC                                     >  SRR4302543.1724725/1‑94 (MQ=60)
                                                           TACACCGATATTATCAGTCATTACCTGGGGAAGAGCTGGGGAATTTTCCTCGGGGTTATCTACTTTTTGATGATTATCCACGGGATTTTTATCT                                    >  SRR4302543.537814/1‑94 (MQ=60)
                                                            ACACCGATATTATCAGTCATTACCTGGGGAAGAGCTGGGGAATTTTCCTCGGGGTTATCTACTTTTTGATGATTATCCACGGGATTTTTATCTA                                   <  SRR4302543.5733694/94‑1 (MQ=60)
                                                            ACACCGATATTATCAGTCATTACCTGGGGAAGAGCTGGGGAATTTTCCTCGGGGTTATCTACTTTTTGATGATTATCCACGGGATTTTTATCTA                                   >  SRR4302543.2384545/1‑94 (MQ=60)
                                                            ACACCGATATGATCAGTCATTACCTGGGGAAGAGCTGGGGAATTTTCCTCGGGGTTATCTACTTTTTGATGATTATCCACGGGATTTTTATCTA                                   <  SRR4302543.7824814/94‑1 (MQ=60)
                                                              ACCGATATTATCAGTCATTACCTGGGGAAGAGCTGGGGAATTTTCCTCGGGGTTATCTACTTTTTGATGATTATCCACGGGATTTTTATCTACT                                 >  SRR4302543.6510940/1‑94 (MQ=60)
                                                               CCGATATTATCAGTCCTTACCTGGGGAAGAGCTGGGGAATTTTCCTCGGGGTTATCTACTTTTTGATGATTATCCACGGGATTTTTATCTACTC                                <  SRR4302543.1926602/94‑1 (MQ=60)
                                                               CCGATATTATCAGTCATTACCTGGGGAAGAGCTGGGGAATTTTCCTCGGGGTTATCTACTTTTTGATGATTATCCACGGGATTTTTATCTACTC                                <  SRR4302543.7088299/94‑1 (MQ=60)
                                                               CCGATATTATCAGTCATTACCTGGGGAAGAGCTGGGGAATTTTCCTCGGGGTTATCTACTTTTTGATGATTATCCACGGGATTTTTATCTACTC                                <  SRR4302543.1926601/94‑1 (MQ=60)
                                                               CCGATATTAACAGTCATAACCTGGGGAAGAACTGGGGAATTTTCCTCGGGATTATCTAAATTTTGATGAAAATCCACGGGATTTTTATCTACTC                                <  SRR4302543.7088300/94‑1 (MQ=60)
                                                                CGATATTATCAGTCATTACCTGGGGAAGAGCTGGGGAATTTTCCTCGGGGTTATCTACTTTTTGATGATTATCCACGGGATTTTTATCTACTCT                               <  SRR4302543.328480/94‑1 (MQ=60)
                                                                 GATATTATCAGTCATTACCTGGGGAAGAGCTGGGGAATTTTCCTCGGGGTTATCTACTTTTTGATGATTATCCACGGGATTTTTATCTACTCTC                              >  SRR4302543.5306176/1‑94 (MQ=60)
                                                                 GATATTATCAGTCATTACCTGGGGAAGAGCTGGGGAATTTTCCTCGGGGTTATCTACTTTTTGATGATTATCCACGGGATTTTTATCTACTCTC                              <  SRR4302543.1574868/94‑1 (MQ=60)
                                                                  ATATTATCAGTCATTACCTGGGGAAGAGCTGGGGAATTTTCCTCGGGGTTATCTACTTTTTGATGATTATCCACGGGATTTTTATCTACTCTCT                             <  SRR4302543.1897589/94‑1 (MQ=60)
                                                                   TATTATCAGTCATTACCTGGGGAAGAGCTGGGGAATTTTCCTCGGGGTTATCTACTTTTTGATGATTATCCACGGGATTTTTATCTCCTCTCTC                            <  SRR4302543.6556225/94‑1 (MQ=60)
                                                                   TATTATCAGTCATTACCTGGGGAAGAGCTGGGGAATTTTCCTCGGGGTTATCTACTTTTTGATGATTATCCACGGGATTTTTATCTACTCTCTC                            >  SRR4302543.3602564/1‑94 (MQ=60)
                                                                    ATTATCAGTCATTACCTGGGGAAGAGCTGGGGAATTTTCCTCGGGGTTATCTACTTTTTGATGATTATCCACGGGATTTTTATCTACTCTCTCT                           <  SRR4302543.2480223/94‑1 (MQ=60)
                                                                    ATTATCAGTCATTACCTGGGGAAGAGCTGGGGAATTTTCCTCGGGGTTATCTACTTTTTGATGATTATCCACGGGATTTTTATCTACTCTCTCT                           <  SRR4302543.3188634/94‑1 (MQ=60)
                                                                     TTATCAGTCATTACCTGGGGAAGAGCTGGGGAATTTTCCTCGGGGTTATCTACTTTTTGATGATTATCCGCGGGATTTTTATCTACTCTCTCTC                          >  SRR4302543.7810089/1‑94 (MQ=60)
                                                                     TTATCAGTCATTACCTGGGGAAGAGCTGGGGAATTTTCCTCGGGGTTATCTACTTTTTGATGATTATCCACGGGATTTTTATCTACTCTCTCTC                          >  SRR4302543.3520352/1‑94 (MQ=60)
                                                                       ATCAGTCATTACCTGGGGAAGAGCTGGGGAATTTTCCTCGGGGTTATCTACTTTTTGATGATTATCCACGGGATTTTTATCTACTCTCTCTCCG                        <  SRR4302543.4594296/94‑1 (MQ=60)
                                                                       ATCAGTCATTACCTGGGGAAGAGCTGGGGAATTTTCCTCGGGGTTATCTACTTTTTGATGATTATCCACGGGATTTTTATCTACTCTCTCTCCG                        >  SRR4302543.5897165/1‑94 (MQ=60)
                                                                        TCAGTCATTACCTGGGGAAGAGCTGGGGAATTTTCCTCGGGGTTATCTACTTTTTGATGATTATCCACGGGATTTTTATCTACTCTCTCTCCGT                       <  SRR4302543.28570/94‑1 (MQ=60)
                                                                         CAGTCATTACCTGGGGAAGAGCTGGGGAATTTTCCTCGGGGTTATCTACTTTTTGATGATTATCCACGGGATTTTTATCTACTCTCTCTCCGTG                      <  SRR4302543.2016924/94‑1 (MQ=60)
                                                                         CAGTCATTACCTGGGGAAGAGCTGGGGAATTTTCCTCGGGGTTATCTACTTTTTGATGATTATCCACGGGATTTTTATCTACTCTCTCTCCGTG                      <  SRR4302543.4244502/94‑1 (MQ=60)
                                                                          AGTCATTACCTGGGGAAGAGCTGGGGAATTTTCCTCGGGGTTATCTACTTTTTGATGATTATCCACGGGATTTTTATCTACTCTCTCTCCGTGG                     >  SRR4302543.5707193/1‑94 (MQ=60)
                                                                          AGTCATTACCTGGGGAAGAGCTGGGGAATTTTCCTCGGGGTTATCTACTTTTTGATGATTATCCACGGGATTTTTATCTACTCTCTCTCCGTGG                     >  SRR4302543.5707194/1‑94 (MQ=60)
                                                                           GTCATTACCTGGGGAAGAGCTGGGGAATTTTCCTCGGGGTTATCTACTTTTTGATGATTATCCACGGGATTTTTATCTACTCTCTCTCCGTGGT                    >  SRR4302543.5141066/1‑94 (MQ=60)
                                                                           GTCATTACCTGGGGAAGAGCTGGGGAATTTTCCTCGGGGTTATCTACTTTTTGATGATTATCCACGGGATTTTTATCTACTCTCTCTCCGTGGT                    <  SRR4302543.3397628/94‑1 (MQ=60)
                                                                            TCATTACCTGGGGAAGAGCTGGGGAATTTTCCTCGGGGTTATCTACTTTTTGATGATTATCCACGGGATTTTTATCTACTCTCTCTCCGTGGTT                   >  SRR4302543.1781273/1‑94 (MQ=60)
                                                                            TCATTACCTGGGGAAGAGCTGGGGAATTTTCCTCGGGGTTATCTACTTTTTGATGATTATCCACGGGATTTTTATCTACTCTCTCTCCGTGGTT                   <  SRR4302543.6127801/94‑1 (MQ=60)
                                                                             CATTACCTGGGGAAGAGCTGGGGAATTTTCCTCGGGGTTATCTACTTTTTGATGATTATCCACGGGATTTTTATCTACTCTCTCTCCGTGGTTT                  >  SRR4302543.5760799/1‑94 (MQ=60)
                                                                             CATTACCTGGGGAAGAGCTGGGGAATTTTCCTCGGGGTTATCTACTTTTTGATGATTATCCACGGGATTTTTATCTACTCTCTCTCCGTGGTTT                  >  SRR4302543.1886011/1‑94 (MQ=60)
                                                                             CATTACCTGGGGAAGAGCTGGGGAATTTTCCTCGGGGTTATCTACTTTTTGATGATTATCCACGGGATTTTTATCTACTCTCTCTCCGTGGTTT                  >  SRR4302543.7934211/1‑94 (MQ=60)
                                                                             CATTACCTGGGGAAGAGCTGGGGAATTTTCCTCGGGGTTATCTACTTTTTGATGATTATCCACGGGATTTTTATCTACTCTCTCTCCGTGGTTT                  >  SRR4302543.380297/1‑94 (MQ=60)
                                                                             CATTACCTGGGGAAGAGCTGGGGAATTTTCCTCGGGGTTATCTACTTTTTGATGATTATCCACGGGATTTTTATCTACTCTCTCTCCGTGGTTT                  <  SRR4302543.3941861/94‑1 (MQ=60)
                                                                              ATTACCTGGGGAAGAGCTGGGGAATTTTCCTCGGGGTTATCTACTTTTTGATGATTATCCACGGGATTTTTATCTACTCTCTCTCCGTGGTTTT                 <  SRR4302543.4265439/94‑1 (MQ=60)
                                                                              ATTACCTGGGGAAGAGCTGGGGAATTTTCCTCGGGGTTATCTACTTTTTGATGATTATCCACGGGATTTTTATCTACTCTCTCTCCGTGGTTTT                 <  SRR4302543.4265438/94‑1 (MQ=60)
                                                                               TTACCTGGGGAAGAGCTGGGGAATTTTCCTCGGGGTTATCTACTTTTTGATGATTATCCACGGGATTTTTATCTACTCTCTCTCCGTGGTTTTC                <  SRR4302543.6513379/94‑1 (MQ=60)
                                                                               TTACCTGGGGAAGAGCTGGGGAATTTTCCTCGGGGTTATCTACTTTTTGATGATTATCCACGGGATTTTTATCTACTCTCTCTCCGTGGTTTTC                >  SRR4302543.6194616/1‑94 (MQ=60)
                                                                                TACCTGGGGAAGAGCTGGGGAATTTTCCTCGGGGTTATCTACTTTTTGATGATTATCCACGGGATTTTTATCTACTCTCTCTCCGTGGTTTTCG               >  SRR4302543.2401955/1‑94 (MQ=60)
                                                                                TACCTGGGGAAGAGCTGGGGAATTTTCCTCGGGGTTATCTACTTTTTGATGATTATCCACGGGATTTTTATCTACTCTCTCTCCGTGGTTTTCG               <  SRR4302543.1234164/94‑1 (MQ=60)
                                                                                 ACCTGGGGAAGAGCTGGGGAATTTTCCTCGGGGTTATCTACTTTTTGATGATTATCCACGGGATTTTTATCTACTCTCTCTCCGTGGTTTTCGA              <  SRR4302543.851477/94‑1 (MQ=60)
                                                                                 ACCTGGGGAAGAGCTGGGGAATTTTCCTCGGGGTTATCTACTTTTTGATGATTATCCACGGGATTTTTATCTACTCTCTCTCCGTGGTTTTCGA              >  SRR4302543.3157094/1‑94 (MQ=60)
                                                                                 ACCTGGGGAAGAGCTGGGGAATTTTCCTCGGGGTTATCTACTTTTTGATGATTATCCACGGGATTTTTATCTACTCTCTCTCCGTGGTTTTCGA              >  SRR4302543.4489533/1‑94 (MQ=60)
                                                                                 ACCTGGGGAAGAGCTGGGGAATTTTCCTCGGGGTTATCTACTTTTTGATGATTATCCACGGGATTTTTATCTACTCTCTCTCCGTGGTTTTCGA              <  SRR4302543.3489951/94‑1 (MQ=60)
                                                                                  CCTGGGGAAGAGCTGGGGAATTTTCCTCGGGGTTATCTACTTTTTGATGATTATCCACGGGATTTTTATCTACTCTCTCTCCGTGGTTTTCGAC             <  SRR4302543.7192932/94‑1 (MQ=60)
                                                                                  CCTGGGGAAGAGCTGGGGAATTTTCCTCGGGGTTATCTACTTTTTGATGATTATCCACGGGATTTTTATCTACTCTATCTCCGTGGTTTTCGAC             >  SRR4302543.7715578/1‑94 (MQ=60)
                                                                                    TGGGGAAGAGCTGGGGAATTTTCCTCGGGGTTATCTACTTTTTGATGATTATCCACGGGATTTTTATCTACTCTCTCTCCGTGGTTTTCGACAG           <  SRR4302543.3753057/94‑1 (MQ=60)
                                                                                     GGGGAAGAGCTGGGGAATTTTCCTCGGGGTTATCTACTTTTTGATGATTATCCACGGGATTTTTATCTACTCTCTCTCCGTGGTTTTCGACAGC          <  SRR4302543.3979559/94‑1 (MQ=60)
                                                                                     GGGGAAAAGCTGGGGAATTTTCCTCGGGGTTATCTACTTTTTGATGATTATCCACGGGATTTTTATCTTCTCTCTCTCCGTGGTTTTCGACAGC          <  SRR4302543.3251709/94‑1 (MQ=60)
                                                                                        GAAGAGCTGGGGAATTTTCCTCGGGGTTATCTACTTTTTGATGATTATCCACGGGATTTTTATCTACTCTCTCTCCGTGGTTTTCGACAGCGCC       >  SRR4302543.6354819/1‑94 (MQ=60)
                                                                                          AGAGCTGGGGAATTTTCCTCGGGGTTATCTACTTTTTGATGATTATCCACGGGATTTTTATCTACTCTCTCTCCGTGGTTTTCGACAGCGCCTC     >  SRR4302543.5599388/1‑94 (MQ=60)
                                                                                           GAGCTGGGGAATTTTCCTCGGGGTTATCTACTTTTTGATGATTATCCACGGGATTTTTATCTACTCTCTCTCCGTGGTTTTCGACAGCGCCTCG    >  SRR4302543.3895982/1‑94 (MQ=60)
                                                                                           GAGCTGGGGAATTTTCCTCGGGGTTATCTACTTGTTGATGATTATCCACGGGATTTTTATCTACTCTCTCTCCGTGGTTTTCGACAGCGCCTCG    <  SRR4302543.7690471/94‑1 (MQ=60)
                                                                                            AGCTGGGGAATTTTCCTCGGGGTTATCTACTTTTTGATGATTATCCACGGGATTTTTATCTACTCTCTCTCCGTGGTTTTCGACAGCGCCTCGT   <  SRR4302543.3075644/94‑1 (MQ=60)
                                                                                             GCTGGGGAATTTTCCTCGGGGTTATCTACTTTTTGATGATTATCCACGGGATTTTTATCTACTCTCTCTCCGTGGTTTTCGACAGCGCCTCGTA  >  SRR4302543.867446/1‑94 (MQ=60)
                                                                                             |                                                                                             
CCTGGGTAGTGCAGGACATTTATTTAAAAACCCTTTCTGAAAGCGATTCCTGTAATGACTACACCGATATTATCAGTCATTACCTGGGGAAGAACTGGGGAATTTTCCTCGGGGTTATCTACTTTTTGATGATTATCCACGGGATTTTTATCTACTCTCTCTCCGTGGTTTTCGACAGCGCCTCGTA  >  NC_000913/3698373‑3698559

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 18 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑