Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A1 F1 I1 R1 1696 279.3 15874187 97.8% 15524954 93.0

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 3,705,464 T→C intergenic (‑130/+781) dppA ← / ← proK dipeptide transport protein/tRNA‑Pro

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009133,705,4640TC100.0% 1248.4 / NA 389intergenic (‑130/+781)dppA/proKdipeptide transport protein/tRNA‑Pro
Reads supporting (aligned to +/- strand):  ref base T (0/0);  new base C (220/169);  total (220/169)

Only 100 of 399 total aligned reads displayed.

TGCAGTGGGTTGTCGCTGCCTGACCTTTTTTGTTTTTTGCCCGGTCGGGTCAACGTTATGAGGTGGGGATGCCGTACTAATTAACATCAGTGTAACAGTGCGGATCCTCCATAAAATGCCCCTCGTGACCTACAATCTGTCAACAGAATGTGAAAACGTCAATACAGCCAACCGGGATTT  >  NC_000913/3705374‑3705553
                                                                                          |                                                                                         
 gCAGTGGGTTGTCGCTGCCTGACCTTTTTTGTTTTTTGCCCGGTCGGGTCAACGTTATGAGGTGGGGATGCCGTACTAATTAACATCAGCGTa                                                                                        >  1:6983791/1‑93 (MQ=255)
   aGTGGGTTGTCGCTGCCTGTCCTTTTTTGTTTTTTGCCCGGTCGGGTCAACGTTATGAGGTGGGGATGCCGTACTAATTAACATCAGCGTAAc                                                                                      <  2:7217094/93‑1 (MQ=255)
   aGTGGGTTGTCGCTGCCTGACCTTTTTTGTTTTTTGCCCGGTCGGGTCAACGTTATGAGGTGGGGATGCCGTACTAATTAACATCAGCGTAAc                                                                                      >  2:1301633/1‑93 (MQ=255)
    gTGGGTTGTCGCTGCCTGACCTTTTTTGTTTTTTGCCCGGTCGGGTCAACGTTATGAGGTGGGGATGCCGTACTAATTAACATCAGCGTAACa                                                                                     >  2:3252706/1‑93 (MQ=255)
    gTGGGTTGTCGCTGCCTGACCTTTTTTGTTTTTTGCCCGGTCGGGTCAACGTTATGAGGTGGGGATGCCGTACTAATTAACATCAGCGTAACa                                                                                     >  1:6299607/1‑93 (MQ=255)
    gTGGGTTGTCGCTGCCTGACCTTTTTTGTTTTTTGCCCGGTCGGGTCAACGTTATGAGGTGGGGATGCCGTACTAATTAACATCAGCGTAACa                                                                                     >  1:7485766/1‑93 (MQ=255)
      gggTTGTCGCTGCCTGACCTTTTTTGTTTTTTGCCCGGTCGGGTCAACGTTATGAGGTGGGGATGCCGTACTAATTAACATCAGCGTAACAGt                                                                                   >  2:148687/1‑93 (MQ=255)
      gggTTGTCGCTGCCTGACCTTTTGTGTTTTTTGCCCGGTCGGGTCAACGTTATGAGGTGGGGATGCCGTACTAATTAACATCAGCGTAACAGt                                                                                   <  2:5362296/93‑1 (MQ=255)
       ggTTGTCGCTGCCTGACCTTTTTTGTTTTTTGCCCGGTCGGGTCAACGTTATGAGGTGGGGATGCCGTACTAATTAACATCAGCGTAACAGTg                                                                                  >  2:249755/1‑93 (MQ=255)
       ggTTGTCGCTGCCTGACCTTTTTTGTTTTTTGCCCGGTCGGGTCAACGTTATGAGGTGGGGATGCCGTACTAATTAACATCAGCGTAACAGTg                                                                                  <  2:1070834/93‑1 (MQ=255)
        gTTGTCGCTGCCTGACCTTTTTTGTTTTTTGCCCGGTCGGGTCAACGTTATGAGGTGGGGATGCCGTACTAATTAACATCAGCGTAACAGTGc                                                                                 >  2:6667512/1‑93 (MQ=255)
         ttGTCGCTGCCTGACCTTTTTTGTTTTTTGCCCGGTCGGGTCAACGTTATGAGGTGGGGATGCCGTACTAATTAACATCAGCGTAACAGTGCg                                                                                <  1:2567668/93‑1 (MQ=255)
         ttGTCGCTGCCTGACCTTTTTTGTTTTTTGCCCGGTCGGGTCAACGTTATGAGGTGGGGATGCCGTACTAATTAACATCAGCGTAACAGTGCg                                                                                <  2:5204477/93‑1 (MQ=255)
         ttGTCGCTGCCTGACCTTTTTTGTTTTTTGCCCGGTCGGGTCAACGTTATGAGGTGGGGATGCCGTACTAATTAACATCAGCGTAACAGTGCg                                                                                >  2:4922079/1‑93 (MQ=255)
         ttGTCGCTGCCTGACCTTTTTTGTTTTTTGCCCGGTCGGGTCAACGTTATGAGGTGGGGATGCCGTACTAATTAACATCAGCGTAACAGTGCg                                                                                <  1:3460786/93‑1 (MQ=255)
         gtGTCGCTGCCTGACCTTTGTTGTTTTTTGCCCGGTCGGGTCAACGTTATGAGGTGGGGATGCCGTACTAATTAACATCAGCGTAACAGTGCg                                                                                <  1:2013964/92‑1 (MQ=255)
          tGTCGCTGCCTGACCTTTTTTGTTTTTTGCCCGGTCGGGTCAACGTTATGAGGTGGGGATGCCGTACTAATTAACATCAGCGTAACAGTGCgg                                                                               >  1:7578250/1‑93 (MQ=255)
          tGTCGCTGCCTGACCTTTTTTGTTTTTTGCCCGGTCGGGTCAACGTTATGAGGTGGGGATGCCGTACTAATTAACATCAGCGTAACAGTGCgg                                                                               >  1:7859794/1‑93 (MQ=255)
           gTCGCTGCCTGACCTTTTTTGTTTTTTGCCCGGTCGGGTCAACGTTATGAGGTGGGGATGCCGTACTAATTAACATCAGCGTAACAGTGCGGa                                                                              <  1:3956913/93‑1 (MQ=255)
            tCGCTGCCTGACCTTTTTTGTTTTTTGCCCGGTCGGGTCAACGTTATGAGGTGGGGATGCCGTACTAATTAACATCAGCGTAACAGTGCGGAt                                                                             >  1:3665621/1‑93 (MQ=255)
             cGCTGCCTGACCTTTTTTGTTTTTTGCCCGGTCGGGTCAACGTTATGAGGTGGGGATGCCGTACTAATTAACATCAGCGTAACAGTGCGGAtc                                                                            <  2:5838463/93‑1 (MQ=255)
             cGCTGCCTGACCTTTTTTGTTTTTTGCCCGGTCGGGTCAACGTTATGAGGTGGGGATGCCGTACTAATTAACATCAGCGTAACAGTGCGGAtc                                                                            <  1:1946864/93‑1 (MQ=255)
              gCTGCCTGACCTTTTTTGTTTTTTGCCCGGTCGGGTCAACGTTATGAGGTGGGGATGCCGTACTAATTAACATCAGCGTAACAGTGCGGAtcc                                                                           >  1:6146294/1‑93 (MQ=255)
                tGCCTGACCTTTTTTGTTTTTTGCCCGGTCGGGTCAACGTTATGAGGTGGGGATGCCGTACTAATTAACATCAGCGTAACAGTGCGGAtcctc                                                                         >  2:6004687/1‑93 (MQ=255)
                 gCCTGACCTTTTTTGTTTTTTGCCCGGTCGGGTCAACGTTATGAGGTGGGGATGCCGTACTAATTAACATCAGCGTAACAGTGCGGAtcctcc                                                                        >  2:3802021/1‑93 (MQ=255)
                 gCCTGACCTTTTTTGTTTTTTGCCCGGTCGGGTCAACGTTATGAGGTGGGGATGCCGTACTAATTAACATCAGCGTAACAGTGCGGAtcctcc                                                                        >  2:5088630/1‑93 (MQ=255)
                 gCCTGACCTTTTTTGTTGTTTGCCCGGTCGGGTCAACGTTATGAGGTGGGGATGCCGTACTAATTAACATCAGCGTAACAGTGCGGAtcctcc                                                                        >  2:7034149/1‑93 (MQ=255)
                   cTGACCTTTTTTGTTTTTTGCCCGGTCGGGTCAACGTTATGAGGTGGGGATGCCGTACTAATTAACATCAGCGTAACAGTGCGGATCCTCCAt                                                                      >  1:1382819/1‑93 (MQ=255)
                    tGACCTTTTTTGTTTTTTGCCCGGTCGGGTCAACGTTATGAGGTGGGGATGCCGTACTAATTAACATCAGCGTAACAGTGCGGATCCTCCATa                                                                     >  1:315718/1‑93 (MQ=255)
                      aCCTTTTTTGTTTTTTGCCCGGTCGGGTCAACGTTATGAGGTGGGGATGCCGTACTAATTAACATCAGCGTAACAGTGCGGATCCTCCATaaa                                                                   <  2:56024/93‑1 (MQ=255)
                       ccTTTTTTGTTTTTTGCCCGGTCGGGTCAACGTTATGAGGTGGGGATGCCGTACTAATTAACATCAGCGTAACAGTGCGGATCCTCCATaaaa                                                                  <  2:7556859/93‑1 (MQ=255)
                        cTTTTTTGTTTTTTGCCCGGTCGGGTCAACGTTATGAGGTGGGGATGCCGTACTAATTAACATCAGCGTAACAGTGCGGATCCTCCATAAAAt                                                                 <  2:6129/93‑1 (MQ=255)
                        cTTTTTTGTTTTTTGCCCGGTCGGGTCAACGTTATGAGGTGGGGATGCCGTACTAATTAACATCAGCGTAACAGTGCGGATCCTCCATAAAAt                                                                 >  2:2195897/1‑93 (MQ=255)
                        cTTTTTTGTTTTTTGCCCGGTCGGGTCAACGTTATGAGGTGGGGATGCCGTACTAATTAACATCAGCGTAACAGTGCGGATCCTCCATAAAAt                                                                 >  1:4608877/1‑93 (MQ=255)
                         ttttttgttttttgCCCGGTCGGGTCAACGTTATGAGGTGGGGATGCCGTACTAATTAACATCAGCGTAACAGTGCGGATCCTCCATAAAATg                                                                <  2:7937020/93‑1 (MQ=255)
                          tttttgttttttgCCCGGTCGGGTCAACGTTATGAGGTGGGGATGCCGTACTAATTAACATCAGCGTAACAGTGCGGATCCTCCATAAAATGc                                                               >  2:3384131/1‑93 (MQ=255)
                           ttttgttttttgCCCGGTCGGGTCAACGTTATGAGGTGGGGATGCCGTACTAATTAACATCAGCGTAACAGTGCGGATCCTCCATAAAATGcc                                                              <  2:4601877/93‑1 (MQ=255)
                             ttgttttttgCCCGGTCGGGTCAACGTTATGAGGTGGGGATGCCGTACTAATTAACATCAGCGTAACAGTGCGGATCCTCCATAAAATGcccc                                                            >  2:2358426/1‑93 (MQ=255)
                              tgttttttgCCCGGTCGGGTCAACGTTATGAGGTGGGGATGCCGTACTAATTAACATCAGCGTAACAGTGCGGATCCTCCATAAAATGCCCCt                                                           >  2:3089979/1‑93 (MQ=255)
                              tgttttttgCCCGGTCGGGTCAACGTTATGAGGTGGGGATGCCGTACTAATTAACATCAGCGTAACAGTGCGGATCCTCCATAAAATGCCCCt                                                           >  2:3592749/1‑93 (MQ=255)
                              tgttttttgCCCGGTCGGGTCAACGTTATGAGGTGGGGATGCCGTACTAATTAACATCAGCGTAACAGTGCGGATCCTCCATAAAATGCCCCt                                                           <  2:1960663/93‑1 (MQ=255)
                              tgtgttttgCCCGGTCGGGTCAACGTTATGAGGTGGGGATGCCGTACTAATTAACATCAGCGTAACAGTGCGGATCCTCCATAAAATGCCCCt                                                           <  2:5655683/93‑1 (MQ=255)
                                  ttttgCCCGGTCGGGTCAACGTTATGAGGTGGGGATGCCGTACTAATTAACATCAGCGTAACAGTGCGGATCCTCCATAAAATGCCCCTCGTg                                                       <  1:5989815/93‑1 (MQ=255)
                                  ttttgCCCGGTCGGGTCAACGTTATGAGGTGGGGATGCCGTACTAATTAACATCAGCGTAACAGTGCGGATCCTCCATAAAATGCCCCTCGTg                                                       >  2:4775382/1‑93 (MQ=255)
                                    ttgCCCGGTCGGGTCAACGTTATGAGGTGGGGATGCCGTACTAATTAACATCAGCGTAACAGTGCGGATCCTCCATAAAATGCCCCTCGTGAc                                                     <  1:2777385/93‑1 (MQ=255)
                                     tgCCCGGTCGGGTCAACGTTATGAGGTGGGGATGCCGTACTAATTAACATCAGCGTAACAGTGCGGATCCTCCATAAAATGCCCCTCGTGAcc                                                    >  1:5709800/1‑93 (MQ=255)
                                      gCCCGGTCGGGTCAACGTTATGAGGTGGGGATGCCGTACTAATTAACATCAGCGTAACAGTGCGGATCCTCCATAAAATGCCCCTCGTGACCt                                                   <  1:907992/93‑1 (MQ=255)
                                       cccGGTCGGGTCAACGTTATGAGGTGGGGATGCCGTACTAATTAACATCAGCGTAACAGTGCGGATCCTCCATAAAATGCCCCTCGTGACCTa                                                  <  1:3850604/93‑1 (MQ=255)
                                       cccGGTCGGGTCAACGTTATGAGGTGGGGATGCCGTACTAATTAACATCAGCGTAACAGTGCGGATCCTCCATAAAATGCCCCTCGTGACCTa                                                  >  1:4288219/1‑93 (MQ=255)
                                       cccGGTCGGGTCAACGTTATGAGGTGGGGATGCCGTACTAATTAACATCAGCGTAACAGTGCGGATCCTCCATAAAATGCCCCTCGTGACCTa                                                  >  1:6476086/1‑93 (MQ=255)
                                        ccGGTCGGGTCAACGTTATGAGGTGGGGATGCCGTACTAATTAACATCAGCGTAACAGTGCGGATCCTCCATAAAATGCCCCTCGTGACCTAc                                                 >  2:4324499/1‑93 (MQ=255)
                                         cGGTCGGGTCAACGTTATGAGGTGGGGATGCCGTACTAATTAACATCAGCGTAACAGTGCGGATCCTCCATAAAATGCCCCTCGTGACCTACa                                                >  1:2236203/1‑93 (MQ=255)
                                         cGGTCGGGTCAACGTTATGAGGTGGGGATGCCGTACTAATTAACATCAGCGTAACAGTGCGGATCCTCCATAAAATGCCCCTCGTGACCTACa                                                <  2:6571247/93‑1 (MQ=255)
                                         cGGTCGGGTCAACGTTATGAGGTGGGGATGCCGTACTAATTAACATCAGCGTAACAGTGCGGATCCTCCATAAAATGCCCCTCGTGACCTACa                                                >  1:670566/1‑93 (MQ=255)
                                           gTCGGGTCAACGTTATGAGGTGGGGATGCCGTACTAATTAACATCAGCGTAACAGTGCGGATCCTCCATAAAATGCCCCTCGTGACCTACAAt                                              >  1:3530926/1‑93 (MQ=255)
                                            tCGGGTCAACGTTATGAGGTGGGGATGCCGTACTAATTAACATCAGCGTAACAGTGCGGATCCTCCATAAAATGCCCCTCGTGACCTACAATc                                             >  2:282461/1‑93 (MQ=255)
                                            tCGGGTCAACGTTATGAGGTGGGGATGCCGTACTAATTAACATCAGCGTAACAGTGCGGATCCTCCATAAAATGCCCCTCGTGACCTACAATc                                             >  2:77413/1‑93 (MQ=255)
                                             cGGGTCAACGTTATGAGGTGGGGATGCCGTACTAATTAACATCAGCGTAACAGTGCGGATCCTCCATAAAATGCCCCTCGTGACCTACAATCt                                            <  2:2164910/93‑1 (MQ=255)
                                              gggTCAACGTTATGAGGTGGGGATGCCGTACTAATTAACATCAGCGTAACAGTGCGGATCCTCCATAAAATGCCCCTCGTGACCTACAATCTg                                           >  1:4543712/1‑93 (MQ=255)
                                               ggTCAACGTTATGAGGTGGGGATGCCGTACTAATTAACATCAGCGTAACAGTGCGGATCCTCCATAAAATGCCCCTCGTGACCTACAATCTGt                                          >  1:33384/1‑93 (MQ=255)
                                               ggTCAACGTTATGAGGTGGGGATGCCGTACTAATTAACATCAGCGTAACAGTGCGGATCCTCCATAAAATGCCCCTCGTGACCTACAATCTGt                                          >  1:7269166/1‑93 (MQ=255)
                                               ggTCAACGTTATGAGGTGGGGATGCCGTACTAATTAACATCAGCGTAACAGTGCGGATCCTCCATAAAATGCCCCTCGTGACCTACAATCTGt                                          <  2:3960033/93‑1 (MQ=255)
                                                 tCAACGTTATGAGGTGGGGATGCCGTACTAATTAACATCAGCGTAACAGTGCGGATCCTCCATAAAATGCCCCTCGTGACCTACAATCTGTCa                                        >  1:6799915/1‑93 (MQ=255)
                                                 tCAACGTTATGAGGTGGGGATGCCGTACTAATTAACATCAGCGTAACAGTGCGGATCCTCCATAAAATGCCCCTCGTGACCTACAATCTGTCa                                        >  1:5896448/1‑93 (MQ=255)
                                                  cAACGTTATGAGGTGGGGATGCCGTACTAATTAACATCAGCGTAACAGTGCGGATCCTCCATAAAATGCCCCTCGTGACCTACAATCTGTCaa                                       <  1:2484539/93‑1 (MQ=255)
                                                  cAACGTTATGAGGTGGGGATGCCGTACTAATTAACATCAGCGTAACAGTGCGGATCCTCCATAAAATGCCCCTCGTGACCTACAATCTGTCaa                                       <  2:6441098/93‑1 (MQ=255)
                                                   aaCGTTATGAGGTGGGGATGCCGTACTAATTAACATCAGCGTAACAGTGCGGATCCTCCATAAAATGCCCCTCGTGACCTACAATCTGTCAAc                                      >  1:4758227/1‑93 (MQ=255)
                                                    aCGTTATGAGGTGGGGATGCCGTACTAATTAACATCAGCGTAACAGTGCGGATCCTCCATAAAATGCCCCTCGTGACCTACAATCTGTCAACa                                     >  1:1639764/1‑93 (MQ=255)
                                                      gTTATGAGGTGGGGATGCCGTACTAATTAACATCAGCGTAACAGTGCGGATCCTCCATAAAATGCCCCTCGTGACCTACAATCTGTCAACAGa                                   <  2:7814125/93‑1 (MQ=255)
                                                      gTTATGAGGTGGGGATGCCGTACTAATTAACATCAGCGTAACAGTGCGGATCCTCCATAAAATGCCCCTCGTGACCTACAATCTGTCAACAGa                                   >  1:1142022/1‑93 (MQ=255)
                                                       ttATGAGGTGGGGATGCCGTACTAATTAACATCAGCGTAACAGTGCGGATCCTCCATAAAATGCCCCTCGTGACCTACAATCTGTCAACAGaa                                  >  1:7164404/1‑93 (MQ=255)
                                                       ttATGAGGTGGGGATGCCGTACTAATTAACATCAGCGTAACAGTGCGGATCCTCCATAAAATGCCCCTCGTGACCTACAATCTGTCAACAGaa                                  >  1:4155452/1‑93 (MQ=255)
                                                        tATGAGGTGGGGATGCCGTACTAATTAACATCAGCGTAACAGTGCGGATCCTCCATAAAATGCCCCTCGTGACCTACAATCTGTCAACAGAAt                                 >  2:1674646/1‑93 (MQ=255)
                                                        tATGAGGTGGGGATGCCGTACTAATTAACATCAGCGTAACAGTGCGGATCCTCCATAAAATGCCCCTCGTGACCTACAATCTGTCAACAGAAt                                 >  1:4799499/1‑93 (MQ=255)
                                                         aTGAGGTGGGGATGCCGTACTAATTAACATCAGCGTAACAGTGCGGATCCTCCATAAAATGCCCCTCGTGACCTACAATCTGTCAACAGAAtg                                <  2:6769734/93‑1 (MQ=255)
                                                          tGAGGTGGGGATGCCGTACTAATTAACATCAGCGTAACAGTGCGGATCCTCCATAAAATGCCCCTCGTGACCTACAATCTGTCAACAGAAtgt                               <  1:2360158/93‑1 (MQ=255)
                                                             ggTGGGGATGCCGTACTAATTAACATCAGCGTAACAGTGCGGATCCTCCATAAAATGCCCCTCGTGACCTACAATCTGTCAACAGAATGTGaa                            <  1:4869177/93‑1 (MQ=255)
                                                               tGGGGATGCCGTACTAATTAACATCAGCGTAACAGTGCGGATCCTCCATAAAATGCCCCTCGTGACCTACAATCTGTCAACAGAATGTGaaaa                          <  2:5765927/93‑1 (MQ=255)
                                                                ggggATGCCATACTAATTAACACCAGCGTAACAGTGCGGATCCTCCATAAAATGCCCCTCGTGACCTACAATCTGTCAACAGAATGTGAAAAc                         <  1:560482/93‑1 (MQ=255)
                                                                  ggATGCCGTACTAATTAACATCAGCGTAACAGTGCGGATCCTCCATAAAATGCCCCTCGTGACCTACAATCTGTCAACAGAATGTGAAAACGt                       <  2:1183784/93‑1 (MQ=255)
                                                                    aTGCCGTACTAATTAACATCAGCGTAACAGTGCGGATCCTCCATAAAATGCCCCTCGTGACCTACAATCTGTCAACAGAATGTGAAAACGTCa                     <  1:5382512/93‑1 (MQ=255)
                                                                    aTGCCGTACTAATTAACATCAGCGTAACAGTGCGGATCCTCCATAAAATGCCCCTCGTGACCTACAATCTGTCAACAGAATGTGAAAACGTCa                     <  2:3307692/93‑1 (MQ=255)
                                                                     tGCCGTACTAATTAACATCAGCGTAACAGTGCGGATCCTCCATAAAATGCCCCTCGTGACCTACAATCTGTCAACAGAATGTGAAAACGTCaa                    >  2:2551371/1‑93 (MQ=255)
                                                                      gCCGTACTAATTAACATCAGCGTAACAGTGCGGATCCTCCATAAAATGCCCCTCGTGACCTACAATCTGTCAACAGAATGTGAAAACGTCAAt                   >  1:2942835/1‑93 (MQ=255)
                                                                        cGTACTAATTAACATCAGCGTAACAGTGCGGATCCTCCATAAAATGCCCCTCGTGACCTACAATCTGTCAACAGAATGTGAAAACGTCAATAc                 >  1:1757109/1‑93 (MQ=255)
                                                                         gTACTAATTAACATCAGCGTAACAGTGCGGATCCTCCATAAAATGCCCCTCGTGACCTACAATCTGTCAACAGAATGTGAAAACGTCAATACa                >  2:6858748/1‑93 (MQ=255)
                                                                          tACTAATTAACATCAGCGTAACAGTGCGGATCCTCCATAAAATGCCCCTCGTGACCTACAATCTGTCAACAGAATGTGAAAACGTCAATACAg               >  2:2689741/1‑93 (MQ=255)
                                                                          tACTAATTAACATCAGCGTAACAGTGCGGATCCTCCATAAAATGCCCCTCGTGACCTACAATCTGTCAACAGAATGTGAAAACGTCAATACAg               >  2:1108076/1‑93 (MQ=255)
                                                                           tcTAATTAACATTAGCGGAACAGGGCGGATCCTCCATAAAATGCCCCTCGTGACCTACAATCTGTCAACAGAATGTGAAAACGTCAATACAGc              <  1:984411/92‑1 (MQ=255)
                                                                            cTAATTAACATCAGCGTAACAGTGCGGATCCTCCATAAAATGCCCCTCGTGACCTACAATCTGTCAACAGAATGTGAAAACGTCAATACAGcc             <  2:1905281/93‑1 (MQ=255)
                                                                              aaTTAACATCAGCGTAACAGTGCGGATCCTCCATAAAATGCCCCTCGTGACCTACAATCTGTCAACAGAATGTGAAAACGTCAATACGGCCaa           <  1:551635/93‑1 (MQ=255)
                                                                              aaTTAACATCAGCGTAACAGTGCGGATCCTCCATAAAATGCCCCTCGTGACCTACAATCTGTCAACAGAATGTGAAAACGTCAATACAGCCaa           >  2:1582124/1‑93 (MQ=255)
                                                                              aaTTAACATCAGCGTAACAGTGCGGATCCTCCATAAAATGCCCCTCGTGACCTACAATCTGTCAACAGAATGTGAAAACGTCAATACAGCCaa           >  2:7367848/1‑93 (MQ=255)
                                                                               aTTAACATCAGCGTAACAGTGCGGATCCTCCATAAAATGCCCCTCGTGACCTACAATCTGTCAACAGAATGTGAAAACGTCAATACAGCCAAc          <  2:2322931/93‑1 (MQ=255)
                                                                               aTTAACATCAGCGTAACAGTGCGGATCCTCCATAAAATGCCCCTCGTGACCTACAATCTGTCAACAGAATGTGAAAACGTCAATACAGCCAAc          >  2:4533938/1‑93 (MQ=255)
                                                                               aTTAACATCAGCGTAACAGTGCGGATCCTCCATAAAATGCCCCTCGTGACCTACAATCTGTCAACAGAATGTGAAAACGTCAATACAGCCAAc          >  2:4245474/1‑93 (MQ=255)
                                                                                ttAACATCAGCGTAACAGTGCGGATCCTCCATAAAATGCCCCTCGTGACCTACAATCTGTCAACAGAATGTGAAAACGTCAATACAGCCAAcc         <  1:5340067/93‑1 (MQ=255)
                                                                                 tAACATCAGCGTAACAGTGCGGATCCTCCATAAAATTCCCCTCGTGACCTACAATCTGTCAACAGAATGTGAAATCGTCAATACAGCCAACCg        <  2:4199866/93‑1 (MQ=255)
                                                                                  aaCATCAGCGTAACAGTGCGGATCCTCCATAAAATGCCCCGCGTGACCTACAATCTGTCAACAGAATGTGAAAACGTCAATACAGCCAACCgg       <  1:3078083/93‑1 (MQ=255)
                                                                                      tCAGCGTAACAGTGCGGATCCTCCATAAAATGCCCCTCGTGACCTACAATCTGTCAACAGAATGTGAAAACGTCAATACAGCCAACCGGGAtt   >  2:4700055/1‑93 (MQ=255)
                                                                                          |                                                                                         
TGCAGTGGGTTGTCGCTGCCTGACCTTTTTTGTTTTTTGCCCGGTCGGGTCAACGTTATGAGGTGGGGATGCCGTACTAATTAACATCAGTGTAACAGTGCGGATCCTCCATAAAATGCCCCTCGTGACCTACAATCTGTCAACAGAATGTGAAAACGTCAATACAGCCAACCGGGATTT  >  NC_000913/3705374‑3705553

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

BRESEQ :: bam2aln output
CTTTGCAGTGGGTTGTCGCTGCCTGACCTTTTTTGTTTTTTGCCCGGTCGGGTCAACGTTATGAGGTGGGGATGCCGTACTAATTAACATCAGTGTAACAGTGCGGATCCTCCATAAAATGCCCCTCGTGACCTACAATCTGTCAACAGAATGTGAAAACGTCAATACAGCCAACCGGGATTTACAC  >  NC_000913/3705371‑3705557
                                                                                             |                                                                                             
CTTTGCAGTGGGTTGTCGCTGTCTGACCTTTTTTGATTTTTGCCCGGTCGGGTCAACGTTATGAGGTGGGGATGCCGTACTAATTAACATCAGC                                                                                               <  SRR4302543.6101995/94‑1 (MQ=60)
CTTTGCAGTGGGTTGTCGCTGCCTGACCTTTTTTGTTTTTTGCCCGGTCGGGTCAACGTTATGAGGTGGGGATGCCGTACTAATTAACATCAGC                                                                                               >  SRR4302543.2989428/1‑94 (MQ=60)
CTTTGCAGTGGGTTGTCGCTGCCTGACCTTTTTTGTTTTTTGCCCGGTCGGGTCAACGTTATGAGGTGGGGATGCCGTACTAATTAACATCAGC                                                                                               <  SRR4302543.6101994/94‑1 (MQ=60)
 TTTGCAGTGGGTTGTCGCTGCCTGTCCTTAGTTGTTTTCTGCCCGGTCGGGTCAACGTTATGAGGTGGGGATGCCGTACTAATTAACATCAGCG                                                                                              <  SRR4302543.6785202/94‑1 (MQ=60)
   TGCAGTGGGTTGTCGCTGCCTGACCTTTTTTGTTTTTTGCCCGGTCGGGTCAACGTTATGAGGTGGGGATGCCGTACTAATTAACATCAGCGTA                                                                                            >  SRR4302543.7049519/1‑94 (MQ=60)
   TGCAGTGGGTTGTCGCTGCCTGACCTTTTTTGTTTTTTGCCCGGTCGGGTCAACGTTATGAGGTGGGGATGCCGTACTAATTAACATCAGCGTA                                                                                            <  SRR4302543.7222133/94‑1 (MQ=60)
    GCAGTGGGTTGTCGCTGCCTGACCTTTTTTGTTTTTTGCCCGGTCGGGTCAACGTTATGAGGTGGGGATGCCGTACTAATTAACATCAGCGTAA                                                                                           <  SRR4302543.364225/94‑1 (MQ=60)
    GCAGTGGGTTGTCGCTGCCTGACCTTTTTTGTTTTTTGCCCGGTCGGGTCAACGTTATGAGGTGGGGATGCCGTACTAATTAACATCAGCGTAA                                                                                           >  SRR4302543.6488635/1‑94 (MQ=60)
      ATTGGGTTTTCGCTGCCTGACCTTTTTTGTTTTTTGCCCGGTCGGGTCAACGTTATGAGGTGGGGATGCCGTACTAATTAACATCAGCGTAACA                                                                                         <  SRR4302543.2861572/94‑1 (MQ=60)
      AGTGGGTTGTCGCTGCCTGACCTTTTTTGTTTTTTGCCCGGTCGGGTCAACGTTATGAGGTGGGGATGCCGTACTAATTAACATCAGCGTAACA                                                                                         >  SRR4302543.7557402/1‑94 (MQ=60)
      AGTGGGTTGTCGCTGCCTGACCTTTTTTGTTTTTTGCCCGGTCGGGTCAACGTTATGAGGTGGGGATGCCGTACTAATTAACATCAGCGTAACA                                                                                         <  SRR4302543.5971829/94‑1 (MQ=60)
      AGTGGGTTGTCGCTGCCTGACCTTTTTTGTTTTTTGCCCGGTCGGGTCAACGTTATGAGGTGGGGATGCCGTACTAATTAACATCAGCGTAACA                                                                                         >  SRR4302543.6358889/1‑94 (MQ=60)
       GTGGGTTGTCGCTGCCTGACCTTTTTTGTTTTTTGCCCGGTCGGGTCAACGTTATGAGGTGGGGATGCCGTACTAATTAACATCAGCGTAACAG                                                                                        >  SRR4302543.3549052/1‑94 (MQ=60)
       GTGGGTTGTCGCTGCCTGACCTTTTTTGTTTTTTGCCCGGTCGGGTCAACGTTATGAGGTGGGGATGCCGTACTAATTAACATCAGCGTAACAG                                                                                        >  SRR4302543.393933/1‑94 (MQ=60)
        TGGGTTGTCGCTGCCTGACCTTTTTTGTTTTTTGCCCGGTCGGGTCAACGTTATGAGGTGGGGATGCCGTACTAATTAACATCAGCGTAACAGT                                                                                       <  SRR4302543.6538673/94‑1 (MQ=60)
        TGGGTTGTCGCTGCCTGACCTTTTTTGTTTTTTGCCCGGTCGGGTCAACGTTATGAGGTGGGGATGCCGTACTAATTAACATCAGCGTAACAGT                                                                                       <  SRR4302543.4815071/94‑1 (MQ=60)
         GGGTTGTCGCTGCCTGACCTTTTTTGTTTTTTGCCCGGTCGGGTCAACGTTATGAGGTGGGGATGCCGTACTAATTAACATCAGCGTAACAGTG                                                                                      >  SRR4302543.478293/1‑94 (MQ=60)
         GGGTTGTCGCTGCCTGACCTTTTTTGTTTTTTGCCCGGTCGGGTCAACGTTATGAGGTGGGGATGCCGTACTAATTAACATCAGCGTAACAGTG                                                                                      <  SRR4302543.6059879/94‑1 (MQ=60)
          GGTTGTCGCTGCCTGACCTTTTTTGTTTTTTGCCCGGTCGGGTCAACGTTATGAGGTGGGGATGCCGTACTAATTAACATCAGCGTAACAGTGC                                                                                     >  SRR4302543.3528461/1‑94 (MQ=60)
           GTTGTCGCTGCCTGACCTTTTTTGTTTTTTGCCCGGTCGGGTCAACGTTATGAGGTGGGGATGCCGTACTAATTAACATCAGCGTAACAGTGCG                                                                                    <  SRR4302543.1336822/94‑1 (MQ=60)
           GTTGTCGCTGCCTGACCTTTTTTGTTTTTTGCCCGGTCGGGTCAACGTTATGAGGTGGGGATGCCGTACTAATTAACATCAGCGTAACAGTGCG                                                                                    <  SRR4302543.170581/94‑1 (MQ=60)
            TTGTCGCTGCCTGACCTTTTTTGTTTTTTGCCCGGTCGGGTCAACGTTATGAGGTGGGGATGCCGTACTAATTAACATCAGCGTAACAGTGCGG                                                                                   >  SRR4302543.7933829/1‑94 (MQ=60)
            TTGTCGCTGCCTGACCTTTTTTGTTTTTTGCCCGGTCGGGTCAACGTTATGAGGTGGGGATGCCGTACTAATTAACATCAGCGTAACAGTGCGG                                                                                   >  SRR4302543.7650310/1‑94 (MQ=60)
            TTGTCGCTGCCTGACCTTTTTTGTTTTTTGCCCGGTCGGGTCAACGTTATGAGGTGGGGATGCCGTACTAATTAACATCAGCGTAACAGTGCGG                                                                                   <  SRR4302543.3491786/94‑1 (MQ=60)
            TTGTCGCTGCCTGACCTTTTTTGTTTTTTGCCCGGTCGGGTCAACGTTATGAGGTGGGGATGCCGTACTAATTAACATCAGCGTAACAGTGCGG                                                                                   <  SRR4302543.2591111/94‑1 (MQ=60)
            GTGTCGCTGCCTGACCTTTGTTGTTTTTTGCCCGGTCGGGTCAACGTTATGAGGTGGGGATGCCGTACTAATTAACATCAGCGTAACAGTGCGG                                                                                   <  SRR4302543.2032065/94‑1 (MQ=60)
              GTCGCTGCCTGACCTTTTTTGTTTTTTGCCCGGTCGGGTCAACGTTATGAGGTGGGGATGCCGTACTAATTAACATCAGCGTAACAGTGCGGAT                                                                                 <  SRR4302543.812772/94‑1 (MQ=60)
              GTCGCTGCCTGACCTTTTTTGTTTTTTGCCCGGTCGGGTCAACGTTATGAGGTGGGGATGCCGTACTAATTAACATCAGCGTAACAGTGCGGAT                                                                                 >  SRR4302543.3697806/1‑94 (MQ=60)
              GTCGCTGCCTGACCTTTTTTGTTTTTTGCCCGGTCGGGTCAACGTTATGAGGTGGGGATGCCGTACTAATTAACATCAGCGTAACAGTGCGGAT                                                                                 <  SRR4302543.3991933/94‑1 (MQ=60)
              GTCGCTGCCTGACCCTTTTTGTTTTTTGCCCGGTCGGGTCAACGTTATGAGGTGGGGATGCCGTACTAATTAACATCAGCGTAACAGTGCGGAT                                                                                 <  SRR4302543.1646129/94‑1 (MQ=60)
               TCGCTGCCTGACCTTTTTTGTTTTTTGCCCGGTCGGGTCAACGTTATGAGGTGGGGATGCCGTACTAATTAACATCAGCGTAACAGTGCGGATC                                                                                >  SRR4302543.5344034/1‑94 (MQ=60)
               TCGCTGCCTGACCTTTTTTGTTTTTTGCCCGGTCGGGTCAACGTTATGAGGTGGGGATGCCGTACTAATTAACATCAGCGTAACAGTGCGGATC                                                                                <  SRR4302543.7078947/94‑1 (MQ=60)
                CGCTGCCTGACCTTTTTTGTTTTTTGCCCGGTCGGGTCAACGTTATGATGTGGGGATGCCGTACTTATTAACATCAGCGTAACAGTGCGGATCC                                                                               >  SRR4302543.7061963/1‑94 (MQ=60)
                CGCTGCCTGACCTTTTTTGTTTTTTGCCCGGTCGGGTCAACGTTATGAGGTGGGGATGCCGTACTAATTAACATCAGCGTAACAGTGCGGATCC                                                                               <  SRR4302543.2955962/94‑1 (MQ=60)
                CGCTGCCTGACCTTTTTTGTTTTTTGCCCGGTCGGGTCAACGTTATGAGGTGGGGATGCCGTACTAATTAACATCAGCGTAACAGTGCGGATCC                                                                               >  SRR4302543.3168955/1‑94 (MQ=60)
                CGCTGCCTGACCTTTTTTGTTTTTTGCCCGGTCGGGTCAACGTTATGAGGTGGGGATGCCGTACTAATTAACATCAGCGTAACAGTGCGGATCC                                                                               >  SRR4302543.4877267/1‑94 (MQ=60)
                CGCTGCCTGACCTTTTTTGTTTTTTGCCCGGTCGGGTCAACGTTATGAGGTGGGGATGCCGTACTAATTAACATCAGCGTAACAGTGCGGATCC                                                                               >  SRR4302543.6204499/1‑94 (MQ=60)
                CGCTGCCTGACCTTTTTTGTTTTTTGCCCGGTCGGGTCAACGTTATGAGGTGGGGATGCCGTACTAATTAACATCAGCGTAACAGTGCGGATCC                                                                               <  SRR4302543.1964340/94‑1 (MQ=60)
                 GCTGCCTGACCTTTTTTGTTTTTTGCCCGGTCGGGTCAACGTTATGAGGTGGGGATGCCGTACTAATTAACATCAGCGTAACAGTGCGGATCCT                                                                              <  SRR4302543.2438062/94‑1 (MQ=60)
                 GCTGCCTGACCTTTTTTGTTTTTTGCCCGGTCGGGTCAACGTTATGAGGTGGGGATGCCGTACTAATTAACATCAGCGTAACAGTGCGGATCCT                                                                              <  SRR4302543.4411282/94‑1 (MQ=60)
                     CCTGACCTTTTTTGTTTTTTGCCCGGTCGGGTCAACGTTATGAGGTGGGGATGCCGTACTAATTAACATCAGCGTAACAGTGCGGATCCTCCAT                                                                          >  SRR4302543.1395259/1‑94 (MQ=60)
                      CTGACCTTTTTTGTTTTTTGCCCGGTCGGGTCAACGTTATGAGGTGGGGATGCCGTACTAATTAACATCAGCGTAACAGTGCGGATCCTCGATA                                                                         >  SRR4302543.997491/1‑94 (MQ=60)
                      CTGACCTTTTTTGTTTTTTGCCCGGTCGGGTCAACGTTATGAGGTGGGGATGCCGTACTAATTAACATCAGCGTAACAGTGCGGATCCTCCATA                                                                         >  SRR4302543.318570/1‑94 (MQ=60)
                       TGACCTTTTTTGTTTTTTGCCCGGTCGGGTCAACGTTATGAGGTGGGGATGCCGTACTAATTAACATCAGCGTAACAGTGCGGATCCTCCATAA                                                                        >  SRR4302543.3879020/1‑94 (MQ=60)
                       TGACCTTTTTTGTTTTTTGCCCGGTCGGGTCAACGTTATGAGGTGGGGATGCCGTACTAATTAACATCAGCGTAACAGTGCGGATCCTCCATAA                                                                        >  SRR4302543.497427/1‑94 (MQ=60)
                       TGACCTTTTTTGTTTTTTGCCCGGTCGGGTCAACGTTATGAGGTGGGGATGCCGTACTAATTAACATCAGCGTAACAGTGCGGATCCTCCATAA                                                                        >  SRR4302543.2535490/1‑94 (MQ=60)
                       TGACCTTTTTTGTTTTTTGCCCGGTCGGGTCAACGTTATGAGGTGGGGATGCCGTACTAATTAACATCAGCGTAACAGTGCGGATCCTCCATAA                                                                        >  SRR4302543.3350378/1‑94 (MQ=60)
                         ACCTTTTTTGTTTTTTGCCCGGTCGGGTCAACGTTATGAGGTGGGGATGCCGTACTAATTAACATCAGCGTAACAGTGCGGATCCTCCATAAAA                                                                      >  SRR4302543.7435860/1‑94 (MQ=60)
                         ACCTTTTTTGTTTTTTGCCCGGTCGGGTCAACGTTATGAGGTGGGGATGCCGTACTAATTAACATCAGCGTAACAGTGCGGATCCTCCATAAAA                                                                      <  SRR4302543.171008/94‑1 (MQ=60)
                          CCTTTTTTGTTTTTTGCCCGGTCGGGTCAACGTTATGAGGTGGGGATGCCGTACTAATTAACATCAGCGTAACAGTGCGGATCCTCCATAAAAT                                                                     <  SRR4302543.4887871/94‑1 (MQ=60)
                          CCTTTTTTGTTTTTTGCCCGGTCGGGTCAACGTTATGAGGTGGGGATGCCGTACTAATTAACATCAGCGTAACAGTGCGGATCCTCCATAAAAT                                                                     <  SRR4302543.4541987/94‑1 (MQ=60)
                          CCTTTTTTGTTTTTTGCCCGGTCGGGTCAACGTTATGAGGTGGGGATGCCGTACTAATTAACATCAGCGTAACAGTGCGGATCCTCCATAAAAT                                                                     >  SRR4302543.4650742/1‑94 (MQ=60)
                          CCTTTTTTGTTTTTTGCCCGGTCGGGTCAACGTTATGAGGTGGGGATGCCGTACTAATTAACATCAGCGTAACAGTGCGGATCCTCCATAAAAT                                                                     >  SRR4302543.4650743/1‑94 (MQ=60)
                          CCTTTTTTGTTTTATGCCCGGTCGGGTCAACGTTATGAGGTGGGGATGCCGTACTAATTAACATCAGCGTAACAGTGCGGATCCTCCATAAAAT                                                                     <  SRR4302543.2016169/94‑1 (MQ=60)
                          CCCTTTTGGTTTTTTGCCCCGGTGGGGCAACGTTATTAGGTGGGGATGCCGTACTAATTAACATCAGCGTAACAGTGCGGATCCTCCATAAAAT                                                                     <  SRR4302543.5832481/94‑1 (MQ=60)
                           CTTTTTTGTTTTTTGCCCGGTCGGGTCAACGTTATGAGGTGGGGATGCCGTACTAATTAACATCAGCGTAACAGTGCGGATCCTCCATAAAATG                                                                    <  SRR4302543.6268020/94‑1 (MQ=60)
                             TTTTTGTTTTTTGCCCGGTCGGGTCAACGTTATGAGGTGGGGATGCCGTACTAATTAACATCAGCGTAACAGTGCGGATCCTCCATAAAATGCC                                                                  >  SRR4302543.6009011/1‑94 (MQ=60)
                             TTTTTGTTTTTTGCCCGGTCGGGTCAACGTTATGAGGTGGGGATGCCGTACTAATTAACATCAGCGTAACAGTGCGGATCCTCCATAAAATGCC                                                                  <  SRR4302543.6076353/94‑1 (MQ=60)
                               TTTGTTTTTTGCCCGGTCGGGTCAACGTTATGAGGTGGGGATGCCGTACTAATTAACATCAGCGTAACAGTGCGGATCCTCCATAAAATGCCCC                                                                >  SRR4302543.2170295/1‑94 (MQ=60)
                                TTGTTTTTTGCCCGGTCGGGTCAACGTTATGAGGTGGGGATGCCGTACTAATTAACATCAGCGTAACAGTGCGGATCCTCCATAAAATGCCCCT                                                               >  SRR4302543.5111943/1‑94 (MQ=60)
                                 TGTTTTTTGCCCGGTCGGGTCAACGTTATGAGGTGGGGATGCCGTACTAATTAACATCAGCGTAACAGTGCGGATCCTCCATAAAATGCCCCTC                                                              <  SRR4302543.3211745/94‑1 (MQ=60)
                                  GTTTTTTGCCCGGTCGGGTCAACGTTATGAGGTGGGGATGCCGTACTAATTAACATCAGCGTAACAGTGCGGATCCTCCATAAAATGCCCCTCG                                                             >  SRR4302543.561921/1‑94 (MQ=60)
                                  GTTTTTTGCCCGGTCGGGTCAACGTTATGAGGTGGGGATGCCGTACTAATTAACATCAGCGTAACAGTGCGAATCCTCCATAAAATGCCCCTCG                                                             >  SRR4302543.7347609/1‑94 (MQ=60)
                                   TTTTTTGCCCGGTCGGGTCAACGTTATGAGGTGGGGATGCCGTACTAATTAACATCAGCGTAACAGTGCGGATCCTCCATAAAATGCCCCTCGT                                                            <  SRR4302543.7546742/94‑1 (MQ=60)
                                   TTTTTTGCCCGGTCGGGTCAACGTTATGAGGTGGGGATGCCGTACTAATTAACATCAGCGTAACAGTGCGGATCCTCCATAAAATGCCCCTCGT                                                            <  SRR4302543.3967698/94‑1 (MQ=60)
                                    TTTTTGCGCGGTCGGGTCAACGTTATGAGGTGGGGATGCCGTACTAATTAACATCAGCGTAACAGTGCGGATCCTCCATAAAATGCCCCTCGTG                                                           <  SRR4302543.2344388/94‑1 (MQ=60)
                                     TTTTGCCCGGTCGGGTCAACGTTATGAGGTGGGGATGCCGTACTAATTAACATCAGCGTAACAGTGCGGATCCTCCATAAAATGCCCCTCGTGA                                                          <  SRR4302543.6044712/94‑1 (MQ=60)
                                      TTTGGCCGGTCGGGTCAACGTTATGAGGTGGGGATGCCGTACTAATTAACATCAGCGTAACAGTGCGGATCCTCCATAAAATGCCCCTCGTGAC                                                         <  SRR4302543.4097459/94‑1 (MQ=60)
                                       TTGCCCGGTCGGGTCAACGTTATGAGGTGGGGATGCCGTACTAATTAACATCAGCGTAACAGTGCGGATCCTCCATAAAATGCCCCTCGTGACC                                                        >  SRR4302543.5761890/1‑94 (MQ=60)
                                       TTGCCCGGTCGGGTCAACGTTATGAGGTGGGGATGCCGTACTAATTAACATCAGCGTAACAGTGCGGATCCTCCATAAAATGCCCCTCGTGACC                                                        <  SRR4302543.2802676/94‑1 (MQ=60)
                                        TGCCCGGTCGGGTCAACGTTATGAGGTGGGGATGCCGTACTAATTAACATCAGCGTAACAGTGCGGATCCTCCATAAAATGCCCCTCGTGACCT                                                       >  SRR4302543.6347782/1‑94 (MQ=60)
                                         GCCCGGTCGGGTCAACGTTATGAGGTGGGGATGCCGTACTAATTAACATCAGCGTAACAGTGCGGATCCTCCATAAAATGCCCCTCGTGACCTA                                                      >  SRR4302543.6537102/1‑94 (MQ=60)
                                         GCCCGGTCGGGTCAACGTTATGAGGTGGGGATGCCGTACTAATTAACATCAGCGTAACAGTGCGGATCCTCCATAAAATGCCCCTCGTGACCTA                                                      <  SRR4302543.915983/94‑1 (MQ=60)
                                         GCCCGGTCGGGTCAACGTTATGAGGTGGGGATGCCGTACTAATTAACATCAGCGTAACAGTGCGGATCCTCCATAAAATGCCCCTCGTGACCTA                                                      >  SRR4302543.4327190/1‑94 (MQ=60)
                                          CCCGGTCGGGTCAACGTTATGAGGTGGGGATGCCGTACTAATTAACATCAGCGTAACAGTGCGGATCCTCCATAAAATGCCCCTCGTGACCTAC                                                     <  SRR4302543.3884622/94‑1 (MQ=60)
                                          CCCGGTCGGGTCAACGTTATGAGGTGGGGATGCCGTACTAATTAACATCAGCGTAACAGTGCGGATCCTCCATAAAATGCCCCTCGTGACCTAC                                                     <  SRR4302543.6257327/94‑1 (MQ=60)
                                          CCCGGTCGGGTCAACGTTATGAGGTGGGGATGCCGTACTAATTAACATCAGCGTAACAGTGCGGATCCTCCATAAAATGCCCCTCGTGACCTAC                                                     <  SRR4302543.2328501/94‑1 (MQ=60)
                                           CCGGTCGGGTCAACGTTATGAGGTGGGGATGCCGTACTAATTAACATCAGCGTAACAGTGCGGATCCTCCATAAAATGCCCCTCGTGACCTACA                                                    <  SRR4302543.3723420/94‑1 (MQ=60)
                                           CCGGTCGGGTCAACGTTATGAGGTGGGGATGCCGTACTAATTAACATCAGCGTAACAGTGCGGATCCTCCATAAAATGCCCCTCGTGACCTACA                                                    >  SRR4302543.2256437/1‑94 (MQ=60)
                                           CCGGTCGGGTCAACGTTATGAGGTGGGGATGCCGTACTAATTAACATCAGCGTAACAGTGCGGATCCTCCATAAAATGCCCCTCGTGACCTACA                                                    >  SRR4302543.676739/1‑94 (MQ=60)
                                           CCGGTCGGGTCAACGTTATGAGGTGGGGATGCCGTACTAATTAACATAAGCGTAACAGTGCGGCTCATCCATAACATGCCACTCGTGACCTACA                                                    >  SRR4302543.2563507/1‑94 (MQ=60)
                                             GGTCGGGTCAACGTTATGAGGTGGGGATGCCGTACTAATTAACATCAGCGTAACAGTGCGGATCCTCCATAAAATGCCCCTCGTGACCTACAAT                                                  >  SRR4302543.248253/1‑94 (MQ=60)
                                             GGTCGGGTCAACGTTATGAGGTGGGGATGCCGTACTAATTAACATCAGCGTAACAGTGCGGATCCTCCATAAAATGCCCCTCGTGACCTACAAT                                                  >  SRR4302543.1500946/1‑94 (MQ=60)
                                             GGTCGGGTCAACGTTATGAGGTGGGGATGCCGTACTAATTAACATCAGCGTAACAGTGCGGATCCTCCATAAAATGCCCCTCGTGACCTACAAT                                                  >  SRR4302543.5795463/1‑94 (MQ=60)
                                             GGTCGGGTCAACGTTATGAGGTGGGGATGCCGTACTAATTAACATCAGCGTAACAGTGCGGATCCTCCATAAAATGCCCCTCGTGACCTACAAT                                                  >  SRR4302543.3562371/1‑94 (MQ=60)
                                              GTCGGGTCAACGTTATGAGGTGGGGATGCCGTACTAATTAACATCAGCGTAACAGTGCGGATCCTCCATAAAATGCCCCTCGTGACCTACAATC                                                 >  SRR4302543.4104743/1‑94 (MQ=60)
                                              GTCGGGTCAACGTTATGAGGTGGGGATGCCGTACTAATTAACATCAGCGTAACAGTGCGGATCCTCCATAAAATGCCCCTCGTGACCTACAATC                                                 <  SRR4302543.5517042/94‑1 (MQ=60)
                                               TCGGGTCAACGTTATGAGGTGGGGATGCCGTACTAATTAACATCAGCGTAACAGTGCGGATCCTCCATAAAATGCCCCTCGTGACCTACAATCT                                                <  SRR4302543.3835023/94‑1 (MQ=60)
                                                CGGGTCAACGTTATGAGGTGGGGATGCCGTACTAATTAACATCAGCGTAACAGTGCGGATCCTCCATAAAATGCCCCTCGTGACCTACAATCTG                                               >  SRR4302543.604534/1‑94 (MQ=60)
                                                CGGGTCAACGTTATGAGGTGGGGATGCCGTACTAATTAACATCAGCGTAACAGTGCGGATCCTCCATAAAATGCCCCTCGTGACCTACAATCTG                                               >  SRR4302543.4585086/1‑94 (MQ=60)
                                                 GGGTCAACGTTATGAGGTGGGGATGCCGTACTAATTAACATCAGCGTAACAGTGCGGATCCTCCATAAAATGCCCCTCGTGACCTACAATCTGT                                              >  SRR4302543.4853408/1‑94 (MQ=60)
                                                 GGGTCAACGTTATGAGGTGGGGATGCCGTACTAATTAACATCAGCGTAACAGTGCGGATCCTCCATAAAATGCCCCTCGTGACCTACAATCTGT                                              >  SRR4302543.4313807/1‑94 (MQ=60)
                                                 GGGTCAACGTTATGAGGTGGGGATGCCGTACTAATTAACATCAGCGTAACAGTGCGGATCCTCCATAAAATGCCCCTCGTGACCTACAATCTGT                                              >  SRR4302543.2003193/1‑94 (MQ=60)
                                                 GGGTCAACGTTATGAGGTGGGGATGCCGTACTAATTAACATCAGCGTAACAGTGCGGATCCTCCATAAAATGCCCCTCGTGACCTACAATCTGT                                              >  SRR4302543.33687/1‑94 (MQ=60)
                                                 GGGTCAACGTTATGAGGTGGGGATGCCGTACTAATTAACATCAGCGTAACAGTGCGGATCCTCCATAAAATGCCCCTCGTGACCTACAATCTGT                                              >  SRR4302543.1261734/1‑94 (MQ=60)
                                                 GGGTCAACGTTATGAGGTGGGGATGCCGTACTAATTAACATCAGCGTAACAGTGCGGATCCTCCATAAAATGCCCCTCGTGACCTACAATCTGT                                              >  SRR4302543.7339396/1‑94 (MQ=60)
                                                  GGTCAACGTTATGAGGTGGGGATGCCGTACTAATTAACATCAGCGTAACAGTGCGGATCCTCCATAAAATGCCCCTCGTGACCTACAATCTGTC                                             <  SRR4302543.4711918/94‑1 (MQ=60)
                                                   GTCAACGTTATGAGGTGGGGATGCCGTACTAATTAACATCAGCGTAACAGTGCGGATCCTCCATAAAATGCCCCTCGTGACCTACAATCTGTCA                                            >  SRR4302543.6864126/1‑94 (MQ=60)
                                                   GTCAACGTTATGAGGTGGGGATGCCGTACTAATTAACATCAGCGTAACAGTGCGGATCCTCCATAAAATGCCCCTCGTGACCTACAATCTGTCA                                            >  SRR4302543.5950224/1‑94 (MQ=60)
                                                    TCAACGTTATGAGGTGGGGATGCCGTACTAATTAACATCAGCGTAACAGTGCGGATCCTCCATACAATGCCCCTCGTGACCTACAATCTGTCAA                                           >  SRR4302543.548173/1‑94 (MQ=60)
                                                     CAACGTTATGAGGTGGGGATGCCGTACTAATTAACATCAGCGTAACAGTGCGGATCCTCCATAAAATGCCCCTCGTGACCTACAATCTGTCAAC                                          >  SRR4302543.4801706/1‑94 (MQ=60)
                                                     CAACGTTATGAGGTGGGGATGCCGTACTAATTAACATCAGCGTAACAGTGCGGATCCTCCATAAAATGCCCCTCGTGACCTACAATCTGTCAAC                                          >  SRR4302543.4270889/1‑94 (MQ=60)
                                                     CAACGTTATGAGGTGGGGATGCCGTACTAATTAACATCAGCGTAACAGTGCGGATCCTCCATAAAATGCCCCTCGTGACCTACAATCTGTCAAC                                          >  SRR4302543.2554568/1‑94 (MQ=60)
                                                     CAACGTTATGAGGTGGGGATGCCGTACTAATTAACATCAGCGTAACAGTGCGGATCCTCCATAAAATGCCCCTCGTGACCTACAATCTGTCAAC                                          <  SRR4302543.2507037/94‑1 (MQ=60)
                                                      AACGTTATGAGGTGGGGATGCCGTACTAATTAACATCAGCGTAACAGTGCGGATCCTCCATAAAATGCCCCTCGTGACCTACAATCTGTCAACA                                         >  SRR4302543.1654392/1‑94 (MQ=60)
                                                      AACGTTATGAGGTGGGGATGCCGTACTAATTAACATCAGCGTAACAGTGCGGATCCTCCATAAAATGCCCCTCGTGACCTACAATCTGTCAACA                                         >  SRR4302543.7648170/1‑94 (MQ=60)
                                                       ACGTTATGAGGTGGGGATGCCGTACTAATTAACATCAGCGTAACAGTGCGGATCCTCCATAAAATGCCCCTCGTGACCTACAATCTGTCAACAG                                        >  SRR4302543.3415403/1‑94 (MQ=60)
                                                       ACGTTATGAGGTGGGGATGCCGTACTAATTAACATCAGCGTAACAGTGCGGATCCTCCATAAAATGCCCCTCGGTACCTCCAATCTGTCAACAG                                        >  SRR4302543.3415149/1‑94 (MQ=60)
                                                        CGTTATGAGGTGGGGATGCCGTACTAATTAACATCAGCGTAACAGTGCGGATCCTCCATAAAATGCCCCTCGTGACCTACAATCTGTCAACAGA                                       >  SRR4302543.1722426/1‑94 (MQ=60)
                                                        CGTTATGAGGTGGGGATGCCGTACTAATTAACATCAGCGTAACAGTGCGGATCCTCCATAAAATGCCCCTCGTGACCTACAATCTGTCAACAGA                                       >  SRR4302543.1152426/1‑94 (MQ=60)
                                                        CGTTATGAGGTGGGGATGCCGTACTAATTAACATCAGCGTAACAGTGCGGATCCTCCATAAAATGCCCCTCGTGACCTACAATCTGTCAACAGA                                       >  SRR4302543.3265407/1‑94 (MQ=60)
                                                         GTTATGAGGTGGGGATGCCGTACTAATTAACATCAGCGTAACAGTGCGGATCCTCCATAAAATGCCCCTCGTGACCTACAATCTGTCAACAGAA                                      >  SRR4302543.4193029/1‑94 (MQ=60)
                                                         GTTATGAGGTGGGGATGCCGTACTAATTAACATCAGCGTAACAGTGCGGATCCTCCATAAAATGCCCCTCGTGACCTACAATCTGTCAACAGAA                                      >  SRR4302543.980430/1‑94 (MQ=60)
                                                         GTTATGAGGTGGGGATGCCGTACTAATTAACATCAGCGTAACAGTGCGGATCCTCCATAAAATGCCCCTCGTGACCTACAATCTGTCAACAGAA                                      >  SRR4302543.7233997/1‑94 (MQ=60)
                                                          TTATGAGGTGGGGATGCCGTACTAATTAACATCAGCGTAACAGTGCGGATCCTCCATAAAATGCCCCTCGTGACCTACAATCTGTCAACAGAAT                                     <  SRR4302543.5736746/94‑1 (MQ=60)
                                                          TTATGAGGTGGGGATGCCGTACTAATTAACATCAGCGTAACAGTGCGGATCCTCCATAAAATGCCCCTCGTGACCTACAATCTGTCAACAGAAT                                     >  SRR4302543.4843360/1‑94 (MQ=60)
                                                          TTATGAGGTGGGGATGCCGTACTAATTAACATCAGCGTAACAGTGCGGATCCTCCATAAAATGCCCCTCGTGACCTACAATCTGTCAACAGAAT                                     >  SRR4302543.4843361/1‑94 (MQ=60)
                                                           TATGAGGTGGGGATGCCGTACTAATTAACATCAGCGTAACAGTGCGGATCCTCCATAAAATGCCCCTCGTGACCTACAATCTGTCAACAGAATG                                    <  SRR4302543.5498309/94‑1 (MQ=60)
                                                           TATGAGGTGGGGATGCCGTACTAATTAACATCAGCGTAACAGTGCGGATCCTCCATAAAATGCCCCTCGTGACCTACAATCTGTCAACAGAATG                                    <  SRR4302543.2636833/94‑1 (MQ=60)
                                                           TATGAGGTGGGGATGCCGTACTAATTAACATCAGCGTAACAGTGCGGATCCTCCATAAAATGCCCCTCGTGACCTACAATCTGTCAACAGAATG                                    >  SRR4302543.4632769/1‑94 (MQ=60)
                                                            ATGAGGTGGGGATGCCGTACTAATTAACATCAGCGTAACAGTGCGGATCCTCCATAAAATGCCCCTCGTGACCTACAATCTGTCAACAGAATGT                                   <  SRR4302543.791886/94‑1 (MQ=60)
                                                            ATGAGGTGGGGATGCCGTACTAATTAACATCAGCGTAACAGTGCGGATCCTCCATAAAATGCCCCTCGTGACCTACAATCTGTCAACAGAATGT                                   >  SRR4302543.6008834/1‑94 (MQ=60)
                                                            ATGAGGTGGGGATGCCGTACTAATTAACATCAGCGTAACAGTGCGGATCCTCCATAAAATGCCCCTCGTGACCTACAATCTGTCAACAGAATGT                                   <  SRR4302543.3671562/94‑1 (MQ=60)
                                                             TGAGGTGGGGATGCCGTACTAATTAACATCAGCGTAACAGTGCGGATCCTCCATAAAATGCCCCTCGTGACCTACAATCTGTCAACAGAATGTG                                  <  SRR4302543.6867292/94‑1 (MQ=60)
                                                             TGAGGTGGGGATGCCGTACTAATTAACATCAGCGTAACAGTGCGGATCCTCCATAAAATGCCCCTCGTGACCTACAATCTGTCAACAGAATGTG                                  <  SRR4302543.2381562/94‑1 (MQ=60)
                                                             TGAGGTGGGGATGCCGTACTAATTAACATCAGCGTAACAGTGCGGATCCTCCATAAAATGCCCCTCGTGACCTACAATCTGTCAACAGAATGTG                                  <  SRR4302543.5721340/94‑1 (MQ=60)
                                                               AGGTGGGGATGCCGTACTAATTAACATCAGCGTAACAGTGCGGATCCTCCATAAAATGCCCCTCGTGACCTACAATCTGTCAACAGAATGTGAA                                >  SRR4302543.2402734/1‑94 (MQ=60)
                                                                GGTGGGGATGCCGTACTAATTAACATCAGCGTAACAGTGCGGATCCTCCATAAAATGCCCCTCGTGACCTACAATCTGTCAACAGAATGTGAAA                               <  SRR4302543.4913566/94‑1 (MQ=60)
                                                                GGTGGGGATGCCGTACTAATTAACATCAGCGTAACAGTGCGGATCCTCCATAAAATGCCCCTCGTGACCTACAATCTGTCAACAGAATGTGAAA                               >  SRR4302543.1895187/1‑94 (MQ=60)
                                                                GGTGGGGATGCCGTACTAAGTAACATCAGCGTAACAGTGCGGATCCTCCATAAAATGCCCCTCGTGACCTACAATCTGTCAACAGAATGTGAAA                               <  SRR4302543.6880846/94‑1 (MQ=60)
                                                                 GTGGGGATGCCGTACTAATTAACATCAGCGTAACAGTGCGGATCCTCCATAAAATGCCCCTCGTGACCTACAATCTGTCAACAGAATGTGAAAA                              <  SRR4302543.4639668/94‑1 (MQ=60)
                                                                  TGGGGATGCCGTACTAATTAACATCAGCGTAACAGTGCGGATCCTCCATAAAATGCCCCTCGTGACCTACAATCTGTCAACAGAATGTGAAAAC                             <  SRR4302543.7253758/94‑1 (MQ=60)
                                                                  TGGGGATGCCGTACTAATTAACATCAGCGTAACAGTGCGGATCCTCCATAAAATGCCCCTCGTGACCTACAATCTGTCAACAGAATGTGAAAAC                             <  SRR4302543.983085/94‑1 (MQ=60)
                                                                   GGGGATGCCGTACTAATTAACATCAGCGTAACAGTGCGGATCCTCCATAAAATGCCCCTCGTGACCTACAATCTGTCAACAGAATGTGAAAACG                            <  SRR4302543.565617/94‑1 (MQ=60)
                                                                   GGGGATGCCATACTAATTAACACCAGCGTAACAGTGCGGATCCTCCATAAAATGCCCCTCGTGACCTACAATCTGTCAACAGAATGTGAAAACG                            <  SRR4302543.565619/94‑1 (MQ=60)
                                                                    GGGATGCCGTACTAATTAACATCAGCGTAACAGTGCGGATCCTCCATAAAATGCCCCTCGTGACCTACAATCTGTCAACAGAATGTGAAAACGT                           >  SRR4302543.3032919/1‑94 (MQ=60)
                                                                    GGGATGCCGTACTAATTAACATCAGCGTAACAGTGCGGATCCTCCATAAAATGCCCCTCGTGACCTACAATCTGTCAACAGAATGTGAAAACGT                           <  SRR4302543.317348/94‑1 (MQ=60)
                                                                    GGGATGCCGTACTAATTAACATCAGCGTAACAGTGCGGATCCTCCATAAAATGCCCCTCGTGACCTACAATCTGTCAACAGAATGTGAAAACGC                           >  SRR4302543.5394783/1‑94 (MQ=60)
                                                                     GGATGCCGTACTAATTAACATCAGCGTAACAGCGCGGATCCTCCATAAAATGCCCCTCGTGACCTACAATCTGTCAACAGAATGTGAAAACGTC                          <  SRR4302543.5769549/94‑1 (MQ=60)
                                                                       ATGCCGTACTAATTAACATCAGCGTAACAGTGCGGATCCTCCATAAAATGCCCCTCGTGACCTACAATCTGTCAACAGAATGTGAAAACGTCAA                        >  SRR4302543.2309807/1‑94 (MQ=60)
                                                                       ATGCCGTACTAATTAACATCAGCGTAACAGTGCGGATCCTCCATAAAATGCCCCTCGTGACCTACAATCTGTCAACAGAATGTGAAAACGTCAA                        <  SRR4302543.5431365/94‑1 (MQ=60)
                                                                        TGCCGTACTAATTAACATCAGCGTAACAGTGCGGATCCTCCATAAAATGCCCCTCGTGACCTACAATCTGTCAACAGAATGTGAAAACGTCAAT                       >  SRR4302543.3423680/1‑94 (MQ=60)
                                                                        TGCCGTACTAATTAACATCAGCGTAACAGTGCGGATCCTCCATAAAATGCCCCTCGTGACCTACAATCTGTCAACAGAATGTGAAAACGTCAAT                       >  SRR4302543.2969554/1‑94 (MQ=60)
                                                                         GCCGTACTAATTAACATCAGCGTAACAGTGCGGATCCTCCATAAAATGCCCCTCGTGACCTACAATGTGTCAACAGAATGTGAAAACGTCAATA                      >  SRR4302543.7958997/1‑94 (MQ=60)
                                                                         GCCGTACTAATTAACATCAGCGTAACAGTGCGGATCCTCCATAAAATGCCCCTCGTGACCTACAATCTGTCAACAGAATGTGAAAACGTCAATA                      <  SRR4302543.2914976/94‑1 (MQ=60)
                                                                         GCCGTACTAATTAACATCAGCGTAACAGTGCGGATCCTCCATAAAATGCCCCTCGTGACCTACAATCTGTCAACAGAATGTGAAAACGTCAATA                      <  SRR4302543.6466311/94‑1 (MQ=60)
                                                                          CCGTACTAATTAACATCAGCGTAACAGTGCGGATCCTCCATAAAATGCCCCTCGTGACCTACAATCTGTCAACAGAATGTGAAAACGTCAATAC                     >  SRR4302543.1772804/1‑94 (MQ=60)
                                                                          CCGTACTAATTAACATCAGCGTAACAGTGCGGATCCTCCATAAAATGCCCCTCGTGACCTACAATCTGTCAACAGAATGTGAAAACGTCAATAC                     <  SRR4302543.7589045/94‑1 (MQ=60)
                                                                          CCGTACTAATTAACATCAGCGTAACAGTGCGGATCCTCCATAAAATGCCCCTCGTGACCTACAATCTGTCAACAGAATGTGAAAACGTCAATAC                     <  SRR4302543.6553476/94‑1 (MQ=60)
                                                                           CGTACTAATTAACATCAGCGTAACAGTGCGGATCCTCCATAAAATGCCCCTCGTGACCTACAATCTGTCAACAGAATGTGAAAACGTCAATACA                    >  SRR4302543.2989357/1‑94 (MQ=60)
                                                                           CGTACTAATTAACATCAGCGTAACAGTGCGGATCCTCCATAAAATGCCCCTCGTGACCTACAATCTGTCAACAGAATGTGAAAACGTCAATACA                    >  SRR4302543.4128806/1‑94 (MQ=60)
                                                                           CGTACTAATTAACATCAGCGTAACAGTGCGGATCCTCCATAAAATGCCCCTCGTGACCTACAATCTGTCAACAGAATGTGAAAACGTCAATACA                    >  SRR4302543.273445/1‑94 (MQ=60)
                                                                           CGTACTAATTAACATCAGCGTAACAGTGCGGATCCTCCATAAAATGCCCCTCGTGACCTACAATCTGTCAACAGAATGTGAAAACGTCAATACA                    >  SRR4302543.6506006/1‑94 (MQ=60)
                                                                           CGTACTAATTAACATCAGCGTAACAGTGCGGATCCTCCATAAAATGCCCCTCGTGACCTACAATCTGTCAACAGAATGTGAAAACGTCAATACA                    >  SRR4302543.5567496/1‑94 (MQ=60)
                                                                           CGTACTAATTAACATCAGCGTAACAGTGCGGATCCTCCATAAAATGCCCCTCGTGACCTACAATCTGTCAACAGAATGTGAAAACGTCAATAAA                    >  SRR4302543.6947610/1‑94 (MQ=60)
                                                                            GTACTAATTAACATCAGCGTAACAGTGCGGATCCTCCATAAAATGCCCCTCGTGACCTACAATCTGTCAACAGAATGTGAAAACGTCAATACAG                   >  SRR4302543.276465/1‑94 (MQ=60)
                                                                            GTACTAATTAACATCAGCGTAACAGTGCGGATCCTCCATAAAATGCCCCTCGTGACCTACAATCTGTCAACAGAATGTGAAAACGTCAATACAG                   >  SRR4302543.4214989/1‑94 (MQ=60)
                                                                            GTACTAATTAACATCAGCGTAACAGTGCGGATCCTCCATAAAATGCCCCTCGTGACCTACAATCTGTCAACAGAATGTGAAAACGTCAATACAG                   >  SRR4302543.3973475/1‑94 (MQ=60)
                                                                            GTACTAATTAACATCAGCGTAACAGTGCGGATCCTCCATAAAATGCCCCTCGTGACCTACAATCTGTCAACAGAATGTGAAAACGTCAATACAC                   >  SRR4302543.6836378/1‑94 (MQ=60)
                                                                             TACTAATTAACATCAGCGTAACAGTGCGGATCCTCCATAAAATGCCCCTCGTGACCTACAATCTGTCAACAGAATGTGAAAACGTCAATACAGC                  <  SRR4302543.5409538/94‑1 (MQ=60)
                                                                              TCTAATTAACATTAGCGGAACAGGGCGGATCCTCCATAAAATGCCCCTCGTGACCTACAATCTGTCAACAGAATGTGAAAACGTCAATACAGCC                 <  SRR4302543.993105/94‑1 (MQ=60)
                                                                              ACTAATTAACATCAGCGTAACAGTGCGGATCCTCCATAAAATGCCCCTCGTGACCTACAATCTGTCAACAGAATGTGAAAACGTCAATACAGCC                 >  SRR4302543.7822667/1‑94 (MQ=60)
                                                                              ACTAATTAACATCAGCGTAACAGTGCGGATCCTCCATAAAATGCCCCTCGTGACCTACAATCTGTCAACAGAATGTGAAAACGTCAATACAGCC                 >  SRR4302543.3690426/1‑94 (MQ=60)
                                                                              ACTAATTAACATCAGCGTAACAGTGCGGATCCTCCATAAAATGCCCCTCGTGACCTACAATCTGTCAACAGAATGTGAAAACGTCAATACAGCC                 <  SRR4302543.993102/94‑1 (MQ=60)
                                                                                TAATTAACATCAGCGTAACAGTGCGGATCCTCCATAAAATGCCCCTCGTGACCTACAATCTGTCAACAGAATGTGAAAACGTCAATACAGCCAA               >  SRR4302543.5662392/1‑94 (MQ=60)
                                                                                TAATTAACATCAGCGTAACAGTGCGGATCCTCCATAAAATGCCCCTCGTGACCTACAATCTGTCAACAGAATGTGAAAACGTCAATACAGCCAA               >  SRR4302543.3155031/1‑94 (MQ=60)
                                                                                TAATTAACATCAGCGTAACAGTGCGGATCCTCCATAAAATGCCCCTCGTGACCTACAATCTGTCAACAGAATGTGAAAACGTCAATACAGCCAA               <  SRR4302543.7336819/94‑1 (MQ=60)
                                                                                 AATTAACATCAGCGTAACAGTGCGGATCCTCCATAAAATGCCCCTCGTGACCTACAATCTGTCAACAGAATGTGAAAACGTCAATACGGCCAAC              <  SRR4302543.556709/94‑1 (MQ=60)
                                                                                 AATTAACATCAGCGTAACAGTGCGGATCCTCCATAAAATGCCCCTCGTGACCTACAATCTGTCAACAGAATGTGAAAACGTCAATACAGCCAAC              >  SRR4302543.2024378/1‑94 (MQ=60)
                                                                                 AATTAACATCAGCGTAACAGTGCGGATCCTCCATAAAATGCCCCTCGTGACCTACAATCTGTCAACAGAATGTGAAAACGTCAATACAGCCAAC              >  SRR4302543.7778680/1‑94 (MQ=60)
                                                                                  ATTAACATCAGCGTAACAGTGCGGATCCTCCATAAAATGCCCCTCGTGACCTACAATCTGTCAACAGAATGTGAAAACGTCAATACAGCCAACC             <  SRR4302543.6845236/94‑1 (MQ=60)
                                                                                  ATTAACATCAGCGTAACAGTGCGGATCCTCCATAAAATGCCCCTCGTGACCTACAATCTGTCAACAGAATGTGAAAACGTCAATACAGCCAACC             >  SRR4302543.354432/1‑94 (MQ=60)
                                                                                  ATTAACATCAGCGTAACAGTGCGGATCCTCCATAAAATGCCCCTCGTGACCTACAATCTGTCAACAGAATGTGAAAACGTCAATACAGCCAACC             >  SRR4302543.6843778/1‑94 (MQ=60)
                                                                                   TTAACATCAGCGTAACAGTGCGGATCCTCCATAAAATGCCCCTCGTGACCTACAATCTGTCAACAGAATGTGAAAACGTCAATACAGCCAACCG            <  SRR4302543.5388373/94‑1 (MQ=60)
                                                                                   TTAACATCAGCGTAACAGTGCGGATCCTCCATAAAATGCCCCTCGTGACCTACAATCTGTCAACAGAATGTGAAAACGTCAATACAGCCAACCG            <  SRR4302543.835068/94‑1 (MQ=60)
                                                                                   TTAACATCAGCGTAACAGTGCGGATCCTCCATAAAATGCCCCTCGTGACCTACAATCTGTCAACAGAATGTGAAAACGTCAATACAGCCAACCG            >  SRR4302543.484255/1‑94 (MQ=60)
                                                                                   TTAACATCAGCGTAACAGTGCGGATCCTCCATAAAATGCCCCTCGTGACCTACAATCTGTCAACAGAATGTGAAAACGTCAATACAGCCAACCG            >  SRR4302543.1533528/1‑94 (MQ=60)
                                                                                   TTAACATCAGCGTAACAGTGCGGATCCTCCATAAAATGCCCCTCGTGACCTACAATCTGTCAACAGAATGTGAAAACGTCAATACAGCCAACCG            <  SRR4302543.7559731/94‑1 (MQ=60)
                                                                                    TAACATCAGCGTAACAGTGCGGATCCTCCATAAAATGCCCCTCGTGACCTACAATCTGTCAACAGAATGTGAAAACGTCAATACAGCCAACCGG           >  SRR4302543.6739900/1‑94 (MQ=60)
                                                                                     AACATCAGCGTAACAGTGCGGATCCTCCATAAAATGCCCCTCGTGACCTACAATCTGTCAACAGAATGTGAAAACGTCAATACAGCCAACCGGG          <  SRR4302543.2212664/94‑1 (MQ=60)
                                                                                     AACATCAGCGTAACAGTGCGGATCCTCCATAAAATGCCCCTCGTGACCTACAATCTGTCAACAGAATGTGAAAACGTCAATACAGCCAACCGGG          <  SRR4302543.2212666/94‑1 (MQ=60)
                                                                                     AACATCAGCGTAACAGTGCGGATCCTCCATAAAATGCCCCTCGTGACCTACAATCTGTCAACAGAATGTGAAAACGTCAATACAGCCAACCGGG          <  SRR4302543.4469937/94‑1 (MQ=60)
                                                                                     AACATCAGCGTAACAGTGCGGATCCTCCATAAAATGCCCCGCGTGACCTACAATCTGTCAACAGAATGTGAAAACGTCAATACAGCCAACCGGG          <  SRR4302543.3105763/94‑1 (MQ=60)
                                                                                      ACATCAGCGTAACAGTGCGGATCCTCCATAAAATGCCCCTCGTGACCTACAATCTGTCAACAGAATGTGAAAACGTCAATACAGCCAACCGGGA         >  SRR4302543.1899497/1‑94 (MQ=60)
                                                                                      ACATCAGCGTAACAGTGCGGATCCTCCATAAAATGCCCCTCGTGACCTACAATCTGTCAACAGAATGTGAAAACGTCAATACAGCCAACCGGGA         >  SRR4302543.1905558/1‑94 (MQ=60)
                                                                                       CATCAGCGTAACAGTGCGGATCCTCCATAAAATGCCCCTCGTGACCTACAATCTGTCAACAGAATGTGAAAACGTCAATACAGCCAACCGGGAT        <  SRR4302543.4728053/94‑1 (MQ=60)
                                                                                        ATCAGCGTAACAGTGCGGATCCTCCATAAAATGCCCCTCGTGACCTACAATCTGTCAACAGAATGTGAAAACGTCAATACAGCCAACCGGGATT       <  SRR4302543.5419683/94‑1 (MQ=60)
                                                                                        ATCAGCGTAACAGTGCGGATCCTCCATAAAATGCCCCTCGTGACCTACAATCTGTCAACAGAATGTGAAAACGTCAATACAGCCAACCGGGATT       <  SRR4302543.7252381/94‑1 (MQ=60)
                                                                                        ATCAGCGTAACAGTGCGGATCCTCCATAAAATGCCCCTCGTGACCTACAATCTGTCAACAGAATGTGAAAACGTCAATACAGCCAACCGGGATT       >  SRR4302543.30879/1‑94 (MQ=60)
                                                                                        ATCAGCGTAACAGTGCGGATCCTCCATAAAATGCCCCTCGTGACCTACAATCTGTCAACAGAATGTGAAAACGTCAATACAGCCAACCGGGATT       >  SRR4302543.2364864/1‑94 (MQ=60)
                                                                                          CAGCGTAACAGTGCGGATCCTCCATAAAATGCCCCTCGTGACCTACAATCTGTCAACAGAATGTGAAAACGTCAATACAGCCAACCGGGATTTA     >  SRR4302543.6920585/1‑94 (MQ=60)
                                                                                           AGCGTAACAGTGCGGATCCTCCATAAAATGCCCCTCGTGACCTACAATCTGTCAACAGAATGTGAAAACGTCAATACAGCCAACCGGGATTTAC    <  SRR4302543.6909650/94‑1 (MQ=60)
                                                                                            GCGTAACAGTGCGGATCCTCCATAAAATGCCCCTCGTGACCTACAATCTGTCAACAGAATGTGAAAACGTCAATACAGCCAACCGGGATTTACA   <  SRR4302543.6114759/94‑1 (MQ=60)
                                                                                             CGTAACAGTGCGGATCCTCCATAAAATGCCCCTCGTGACCTACAATCTGTCAACAGAATGTGAAAACGTCAATACAGCCAACCGGGATTTACAC  <  SRR4302543.2446115/94‑1 (MQ=60)
                                                                                             CGTAACAGTGCGGATCCTCCATAAAATGCCCCTCGTGACCTACAATCTGTCAACAGAATGTGAAAACGTCAATACAGCCAACCGGGATTTACAC  >  SRR4302543.3659377/1‑94 (MQ=60)
                                                                                             CGTAACAGTGCGGATCCTCCATAAAATGCCCCTCGTGACCTACAATCTGTCAACAGAATGTGAAAACGTCAATACAGCCAACCGGGATTTACAC  >  SRR4302543.5005297/1‑94 (MQ=60)
                                                                                             |                                                                                             
CTTTGCAGTGGGTTGTCGCTGCCTGACCTTTTTTGTTTTTTGCCCGGTCGGGTCAACGTTATGAGGTGGGGATGCCGTACTAATTAACATCAGTGTAACAGTGCGGATCCTCCATAAAATGCCCCTCGTGACCTACAATCTGTCAACAGAATGTGAAAACGTCAATACAGCCAACCGGGATTTACAC  >  NC_000913/3705371‑3705557

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 9 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑