Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A1 F1 I1 R1 1696 279.3 15874187 97.8% 15524954 93.0

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 3,774,290 A→G intergenic (‑283/‑2) b4550 ← / → yibL hypothetical protein/hypothetical protein

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009133,774,2900AG99.7% 1046.5 / NA 329intergenic (‑283/‑2)b4550/yibLhypothetical protein/hypothetical protein
Reads supporting (aligned to +/- strand):  ref base A (1/0);  new base G (188/140);  total (189/140)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 341 total aligned reads displayed.

TTACAGAACTATTACAATGTCATTAGTTGTGAACAAAGCACCTGGTCGCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCACATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTCAGCGATCGCCTGGACGCCATCCGCCACCAGCAGGCCGATCTTTCGCTGGTTGA  >  NC_000913/3774200‑3774380
                                                                                          |                                                                                          
ttACAGAACTATTACAATGTCATTAGTTGTGAACAAATCACCTGGTCGCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATcgca                                                                                          <  1:5551429/93‑1 (MQ=255)
ttACAGAACTATTACAATGTCATTAGTTGTGAACAAAGCACCTGGTCGCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATcgca                                                                                          <  1:3982590/93‑1 (MQ=255)
ttACAGAACTATTACAATGTCATTAGTTGTGAACAAAGCACCTGGTCGCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATcgca                                                                                          >  2:6767295/1‑93 (MQ=255)
 tACAGAACTATTACAATGTCATTAGTTGTGAACAAAGCACCTGGTCGCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCAt                                                                                         <  2:3789712/93‑1 (MQ=255)
  aCAGAACTATTACAATGTCATTAGTTGTGAACAAAGCACCTGGTCGCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATg                                                                                        >  1:5260765/1‑93 (MQ=255)
   cAGAACTATTACAATGTCATTAGTTGTGAACAAAGCACCTGGTCGCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGa                                                                                       <  1:2093126/93‑1 (MQ=255)
     gAACTATTACAATGTCATTAGTTGTGAACAAAGCACCTGGTCGCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGaaa                                                                                     <  1:4147822/93‑1 (MQ=255)
     gAACTATTACAATGTCATTAGTTGTGAACAAAGCACCTGGTCGCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGaaa                                                                                     >  2:2349383/1‑93 (MQ=255)
      aaCTATTACAATGTCATTAGTTGTGAACAAAGCACCTGGTCGCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAaag                                                                                    >  2:5725785/1‑93 (MQ=255)
       aCTATTACAATGTCATTAGTTGTGAACAAAGCACCTGGTCGCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAaaga                                                                                   >  2:3708339/1‑93 (MQ=255)
        cTATTACAATGTCATTAGTTGTGAACAAAGCACCTGGTCGCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAaagaa                                                                                  >  1:7162887/1‑93 (MQ=255)
         tATTACAATGTCATTAGTTGTGAACAAAGCACCTGGTCGCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAaagaag                                                                                 <  1:3163196/93‑1 (MQ=255)
         tATTACAATGTCATTAGTTGTGAACAAAGCACCTGGTCGCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAaagaag                                                                                 >  1:5491292/1‑93 (MQ=255)
         tATTACAATGTCATTAGTTGTGAACAAAGCACCTGGTCGCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAaagaag                                                                                 >  2:7306724/1‑93 (MQ=255)
          aTTACAATGTCATTAGTTGTGAACAAAGCACCTGGTCGCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGt                                                                                >  1:6778304/1‑93 (MQ=255)
          aTTACAATATCATTAGTTGTGAACAAAGCACCTGGTCGCGCATACTAGGGGCTATCACTTTATCTTTATCAGAAGCCATCGCATGAACGAAGt                                                                                >  1:1219543/1‑93 (MQ=255)
             aCAATGTCATTAGTTGTGAACAAAGCACCTGGTCGCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGa                                                                             >  1:7632665/1‑93 (MQ=255)
             aCAATGTCATTAGTTGTGAACAAAGCACCGGGACGCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGGCATCGCATGCAAGAAGTAGa                                                                             >  2:582155/1‑93 (MQ=255)
               aaTGTCATTAGTTGTGAACAAAGCACCTGGTCGCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGaaa                                                                           >  2:5181842/1‑93 (MQ=255)
               aaTGTCATTAGTTGTGAACAAAGCACCTGGTCGCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGaaa                                                                           >  1:7327533/1‑93 (MQ=255)
               aaTGTCATTAGTTGTGAACAAAGCACCTGGTCGCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGaaa                                                                           >  2:7177127/1‑93 (MQ=255)
               aaTGTCATTAGTTGTGAACAAAGCACCTGGTCGCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGaaa                                                                           >  1:7872334/1‑93 (MQ=255)
                aTGTCATTAGTTGTGAACAAAGCACCTGGTCGCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGaaaa                                                                          >  1:1630888/1‑93 (MQ=255)
                 tGTCATTAGTTGTGAACAAAGCACCTGGTCGCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGaaaaa                                                                         >  1:3606797/1‑93 (MQ=255)
                 tGTCATTAGTTGTGAACAAAGCACCTGGTCGCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGaaaaa                                                                         <  1:6193503/93‑1 (MQ=255)
                  gTCATTAGTTGTGAACAAAGCACCTGGTCGCGCATACTAAGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGaaaaaa                                                                        >  2:2729207/1‑93 (MQ=255)
                   tCATTAGTTGTGAACAAAGCACCTGGTCGCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGaaaaaaa                                                                       >  1:4510738/1‑93 (MQ=255)
                   tCATTAGTTGTGAACAAAGCACCTGGTCGCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGaaaaaaa                                                                       >  1:7920697/1‑93 (MQ=255)
                       tAGTTGTGAACAAAGCACCTGGTCGCGCATACTAGGGGCTATAAATTTATTTTTATCAGAAGCCATCGCATAAAAGAAGTCGAAAAAAACaaa                                                                   <  2:1621968/93‑1 (MQ=255)
                       tAGTTGTGAACAAAGCACCTGGTCGCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGaa                                                                   <  1:7546123/93‑1 (MQ=255)
                       tAGTTGTGAACAAAGCACCTGGTCGCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGaa                                                                   >  2:5297895/1‑93 (MQ=255)
                        aGTTGTGAACAAAGCACCTGGTCGCGCATACTAGGGGCTATAAACTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGaaa                                                                  <  1:4871960/93‑1 (MQ=255)
                         gTTGTGAACAAAGCACCTGGTCGCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAAt                                                                 >  2:4912457/1‑93 (MQ=255)
                         gTTGTGAACAAAGCACCTGGTCGCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAAt                                                                 >  1:7258638/1‑93 (MQ=255)
                         gTTGTGAACAAAGCACCTGGTCGCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAAt                                                                 >  2:2993029/1‑93 (MQ=255)
                         gTTGTGAACAAAGCACCTGGTCGCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAAt                                                                 >  1:2460292/1‑93 (MQ=255)
                          ttGTGAACAAAGCACCTGGTCGCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATc                                                                <  2:1083880/93‑1 (MQ=255)
                           tgtgAACAAAGCACCTGGTCGCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGACAGAAGTCGAAAAAAACGAAATCa                                                               >  2:4292733/1‑93 (MQ=255)
                           tgtgAACAAAGCACCTGGTCGCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCa                                                               >  1:2573491/1‑93 (MQ=255)
                             tgAACAAAGCACCTGGTCGCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCaaa                                                             <  1:7063411/93‑1 (MQ=255)
                             tgAACAAAGCACCTGGTCGCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCaaa                                                             <  1:1502867/93‑1 (MQ=255)
                               aaCAAAGCACCTGGTCGCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACg                                                           >  2:2189342/1‑93 (MQ=255)
                                aCAAAGCACCTGGTCGCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGc                                                          >  2:7707430/1‑93 (MQ=255)
                                   aaGCACCTGGTCGCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTc                                                       >  1:2987529/1‑93 (MQ=255)
                                   aaGCACCTGGTCGCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTc                                                       >  1:1943490/1‑93 (MQ=255)
                                    aGCACCTGGTCGCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAAACAACGAAATCAAACGCCTcg                                                      >  2:167756/1‑92 (MQ=255)
                                    aGCACCTGGTCGCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTCa                                                      <  2:4079878/93‑1 (MQ=255)
                                    aGCACCTGGTCGCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTCa                                                      <  1:2902369/93‑1 (MQ=255)
                                    aGCACCTGGTCGCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTCa                                                      >  2:6477848/1‑93 (MQ=255)
                                     gCACCTGGTCGCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTCAg                                                     <  1:3227373/93‑1 (MQ=255)
                                     gCACCTGGTCGCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTCAg                                                     <  1:6881074/93‑1 (MQ=255)
                                     gCACCTGGTCGCGAATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTCAg                                                     <  2:4985077/93‑1 (MQ=255)
                                      cACCTGGTCGCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTCAGc                                                    <  1:772445/93‑1 (MQ=255)
                                      cACCTGGTCGCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTCAGc                                                    >  1:5366068/1‑93 (MQ=255)
                                      cACCTGGTCGCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTCAGc                                                    <  2:1965933/93‑1 (MQ=255)
                                       aCCTGGTCGCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTCAGCg                                                   >  1:1324729/1‑93 (MQ=255)
                                       aCCTGGTCGCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTCAGCg                                                   >  2:7240584/1‑93 (MQ=255)
                                        ccTGGTCGCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTCAGCGa                                                  >  1:6326217/1‑93 (MQ=255)
                                          tGGTCGCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTCAGCGATc                                                >  2:5525617/1‑93 (MQ=255)
                                            gTCGCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTCAGCGATCGc                                              >  1:3506640/1‑93 (MQ=255)
                                             tCGCGGATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTCAGCGATCGcc                                             <  2:6537944/93‑1 (MQ=255)
                                             tCGCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTCAGCGATCGcc                                             <  2:1391849/93‑1 (MQ=255)
                                              cgcgCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTCAGCGATCGCCt                                            <  1:6471319/93‑1 (MQ=255)
                                              cgcgCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTCAGCGATCGCCt                                            >  2:3418855/1‑93 (MQ=255)
                                               gcgcATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTCAGCGATCGCCTg                                           <  2:6874083/93‑1 (MQ=255)
                                                 gcATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTCAGCGATCGCCTGGa                                         >  1:5726200/1‑93 (MQ=255)
                                                 gcATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTCAGCGATCGCCTGGa                                         >  2:6237679/1‑93 (MQ=255)
                                                       tAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTCAGCGATCGCCTGGACGCCAt                                   <  1:1547148/93‑1 (MQ=255)
                                                        aGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTCAGCGATCGCCTGGACGCCATc                                  <  2:4514295/93‑1 (MQ=255)
                                                         ggggCTATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTCAGCGATCGCCTGGACGCCATcc                                 <  1:1022913/93‑1 (MQ=255)
                                                           ggCTATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTCAGCGATCGCCTGGACGCCATCCGc                               >  1:3925397/1‑93 (MQ=255)
                                                            gCTATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTCAGCGATCGCCTGGACGCCATCCGcc                              >  2:4173542/1‑93 (MQ=255)
                                                             cTATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTCAGCGATCGCCTGGACGCCATCCGcca                             >  1:3821456/1‑93 (MQ=255)
                                                              tataAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTCAGCGATCGCCTGGACGCCATCCGccac                            >  1:654556/1‑93 (MQ=255)
                                                              tataAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTCAGCGATCGCCTGGACGCCATCCGccac                            >  2:2477301/1‑93 (MQ=255)
                                                               ataAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTCAGCGATCGCCTGGACGCCATCCGccacc                           >  2:7464475/1‑93 (MQ=255)
                                                                taAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTCAGCGATCGCCTGGACGCCATCCGccacca                          <  2:4698572/93‑1 (MQ=255)
                                                                 aaaTTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTCAGCGATCGCCTGGACGCCATCCGCCACcag                         >  1:1753058/1‑93 (MQ=255)
                                                                 aaaTTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTCAGCGATCGCCTGGACGCCATCCGCCACcag                         <  2:1140169/93‑1 (MQ=255)
                                                                  aaTTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTCAGCGATCGCCTGGACGCCATCCGCCACcagc                        <  2:5469064/93‑1 (MQ=255)
                                                                   aTTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTCAGCGATCGCCTGGACGCCATCCGCCACcagca                       >  2:7892896/1‑93 (MQ=255)
                                                                   aTTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTCAGCGATCGCCTGGACGCCATCCGCCACcagca                       <  2:2907069/93‑1 (MQ=255)
                                                                    tttatctttatcAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTCAGCGATCGCCTGGACGCCATCCGCCACcagcag                      >  2:3570648/1‑93 (MQ=255)
                                                                    tttatctttatcAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACCAAATCAAACGCCTCAGCGATCGCCTGGACGCCATCCGCCACcagcag                      >  1:7811024/1‑93 (MQ=255)
                                                                     ttatctttatcAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTCAGCGATCGCCTGGACGCCATCCGCCACCAGCAgg                     >  1:5069512/1‑93 (MQ=255)
                                                                      tatctttatcAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTCAGCGATCGCCTGGACGCCATCCGCCACCAGCAGGc                    >  2:6144820/1‑93 (MQ=255)
                                                                      tatctttatcAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTCAGCGATCGCCTGGACGCCATCCGCCACCAGCAGGc                    >  1:4346348/1‑93 (MQ=255)
                                                                       atctttatcAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTCAGCGATCGCCTGGACGCCATCCGCCACCAGCAGGcc                   >  2:7644112/1‑93 (MQ=255)
                                                                       atctttatcAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTCAGCGATCGCCTGGACGCCATCCGCCACCAGCAGGcc                   >  2:1588639/1‑93 (MQ=255)
                                                                       atctttatcAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTCAGCGATCGCCTGGACGCCATCCGCCACCAGCAGGcc                   <  2:6900043/93‑1 (MQ=255)
                                                                             atcAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTCAGCGATCGCCTGGACGCCATCCGCCACCAGCAGGCCGATCtt             <  2:2588547/93‑1 (MQ=255)
                                                                              tcAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTCAGCGATCGCCTGGACGCCATCCGCCACCAGCAGGCCGATCttt            >  1:3104229/1‑93 (MQ=255)
                                                                                aGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTCAGCGATCGCCTGGACGCCATCCGCCACCAGCAGGCCGATCTTTCg          >  2:3469384/1‑93 (MQ=255)
                                                                                 gAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTCAGCGATCGCCTGGACGCCATCCGCCACCAGCAGGCCGATCTTTCGc         <  1:848240/93‑1 (MQ=255)
                                                                                  aaGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTCAGCGATCGCCTGGACGCCATCCGCCACCAGCAGGCCGATCTTTCGCt        <  1:6092377/93‑1 (MQ=255)
                                                                                    gCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTCAGCGATCGCCTGGACGCCATCCGCCACCAGCAGGCCGATCTTTCGCTgg      >  1:5945953/1‑93 (MQ=255)
                                                                                    accATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTCAGCGATCGCCTGGACGCCATCCGCCACCAGCAGGCCGATCTTTCGCTgg      <  2:1880977/92‑1 (MQ=255)
                                                                                     ccATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTCAGCGATCGCCTGGACGCCATCCGCCACCAGCAGGCCGATCTTTCGCTGGt     >  2:6008583/1‑93 (MQ=255)
                                                                                     ccATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTCAGCGATCGCCTGGACGCCATCCGCCACCAGCAGGCCGATCTTTCGCTGGt     >  1:2179899/1‑93 (MQ=255)
                                                                                      cATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTCAGCGATCGCCTGGACGCCATCCGCCACCAGCAGGCCGATCTTTCGCTGGtt    >  2:5054646/1‑93 (MQ=255)
                                                                                          |                                                                                          
TTACAGAACTATTACAATGTCATTAGTTGTGAACAAAGCACCTGGTCGCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCACATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTCAGCGATCGCCTGGACGCCATCCGCCACCAGCAGGCCGATCTTTCGCTGGTTGA  >  NC_000913/3774200‑3774380

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 

GATK/CNVnator alignment

BRESEQ :: bam2aln output
CGTTACAGAACTATTACAATGTCATTAGTTGTGAACAAAGCACCTGGTCGCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCACATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTCAGCGATCGCCTGGACGCCATCCGCCACCAGCAGGCCGATCTTTCGCTGGTTGAAGC  >  NC_000913/3774198‑3774383
                                                                                            |                                                                                             
CGTTACAGAACTATTACAATGTCATTAGTTGTGAACAAAGCACCTGGTCGCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGC                                                                                              >  SRR4302543.1395174/1‑94 (MQ=60)
 GTTACAGAACTATTACAATGTCATTAGTTGTGAACAAAGCACCTGGTCGCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCA                                                                                             >  SRR4302543.2686836/1‑94 (MQ=60)
 GTTACAGAACTATTACAATGTCATTAGTTGTGAACAAAGCACCTGGTCGCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCA                                                                                             >  SRR4302543.3244465/1‑94 (MQ=60)
  TTACAGAACTATTACAATGTCATTAGTTGTGAACAAATCACCTGGTCGCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCAT                                                                                            <  SRR4302543.5601910/94‑1 (MQ=60)
  TTACAGAACTATTACAATGTCATTAGTTGTGAACAAAGCACCTGGTCGCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCAT                                                                                            <  SRR4302543.4017916/94‑1 (MQ=60)
   TACAGAACTATTACAATGTCATTAGTTGTGAACAAAGCACCTGGTCGCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATG                                                                                           >  SRR4302543.951573/1‑94 (MQ=60)
   TACAGAACTATTACAATGTCATTAGTTGTGAACAAAGCACCTGGTCGCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATG                                                                                           >  SRR4302543.5308222/1‑94 (MQ=60)
    ACAGAACTATTACAATGTCATTAGTTGTGAACAAAGCACCTGGTCGCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGA                                                                                          <  SRR4302543.7642113/94‑1 (MQ=60)
     CAGAACTATTACAATGTCATTAGTTGTGAACAAAGCACCTGGTCGCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAA                                                                                         <  SRR4302543.2111829/94‑1 (MQ=60)
     CAGAACTATTACAATGTCATTAGTTGTGAACAAAGCACCTGGTCGCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAA                                                                                         <  SRR4302543.6606160/94‑1 (MQ=60)
     CAGAACTATTACAATGTCATTAGTTGTGAACAAAGCACCTGGTCGCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAA                                                                                         >  SRR4302543.3391633/1‑94 (MQ=60)
      AGAACTATTACAATGTCATTAGTTGTGAACAAAGCACCTGGTCGCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAAA                                                                                        >  SRR4302543.5471200/1‑94 (MQ=60)
      AGAACTATTACAATGTCATTAGTTGTGAACAAAGCACCTGGTCGCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAAA                                                                                        <  SRR4302543.3058435/94‑1 (MQ=60)
      AGAACTATTACAATGTCATTAGTTGTGAACAAAGCACCTGGTCGCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAAA                                                                                        >  SRR4302543.3766725/1‑94 (MQ=60)
      AGAACTATTACAATGTCATTAGTTGTGAACAAAGCACCTGGTCGCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAAA                                                                                        <  SRR4302543.7972577/94‑1 (MQ=60)
      AGAACTATTACAATGTCATTAGTTGTGAACAAAGCACCTGGTCGCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAAA                                                                                        >  SRR4302543.815437/1‑94 (MQ=60)
       GAACTATTACAATGTCATTAGTTGTGAACAAAGCACCTGGTCGCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAAAG                                                                                       <  SRR4302543.4185317/94‑1 (MQ=60)
       GAACTATTACAATGTCATTAGTTGTGAACAAAGCACCTGGTCGCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAAAG                                                                                       <  SRR4302543.4185097/94‑1 (MQ=60)
       GAACTATTACAATGTCATTAGTTGTGAACAAAGCACCTGGTCGCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAAAG                                                                                       <  SRR4302543.3975396/94‑1 (MQ=60)
        AACTATTACAATGTCATTAGTTGTGAACAAAGCACCTGGTCGCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGA                                                                                      >  SRR4302543.6226226/1‑94 (MQ=60)
        AACTATTACAATGTCATTAGTTGTGAACAAAGCACCTGGTCGCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGA                                                                                      >  SRR4302543.2070827/1‑94 (MQ=60)
         ACTATTACAATGTCATTAGTTGTGAACAAAGCACCTGGTCGCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAA                                                                                     <  SRR4302543.6001450/94‑1 (MQ=60)
         ACTATTACAATGTCATTAGTTGTGAACAAAGCACCTGGTCGCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAA                                                                                     >  SRR4302543.7232474/1‑94 (MQ=60)
         ACTATTACAATGTCATTAGTTGTGAACAAAGCACCTGGTCGCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAA                                                                                     <  SRR4302543.839356/94‑1 (MQ=60)
          CTATTACAATGTCATTAGTTGTGAACAAAGCACCTGGTCGCGCATACTAGGGGCTATACATTTATCTTTATCAGAAGCCATCGCATGAAAGAAG                                                                                    >  SRR4302543.1101178/1‑94 (MQ=60)
          CTATTACAATGTCATTAGTTGTGAACAAAGCACCTGGTCGCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAG                                                                                    >  SRR4302543.7695906/1‑94 (MQ=60)
          CTATTACAATGTCATTAGTTGTGAACAAAGCACCTGGTCGCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAG                                                                                    >  SRR4302543.5541092/1‑94 (MQ=60)
           TATTACAATGTCATTAGTTGTGAACAAAGCACCTGGTCGCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGT                                                                                   >  SRR4302543.1230506/1‑94 (MQ=60)
           TATTACAATGTCATTAGTTGTGAACAAAGCACCTGGTCGCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGT                                                                                   >  SRR4302543.6842324/1‑94 (MQ=60)
           TATTACAATGTCATTAGTTGTGAACAAAGCACCTGGTCGCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGT                                                                                   <  SRR4302543.3191675/94‑1 (MQ=60)
           TATTACAATATCATTAGTTGTGAACAAAGCACCTGGTCGCGCATACTAGGGGCTATCACTTTATCTTTATCAGAAGCCATCGCATGAACGAAGT                                                                                   >  SRR4302543.1230507/1‑94 (MQ=60)
            ATTACAATGTCATTAGTTGTGAACAAAGCACCTGGTCGCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTC                                                                                  <  SRR4302543.2127072/94‑1 (MQ=60)
             TTACAATGTCATTAGTTGTGAACAAAGCACCTGGTCGCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCG                                                                                 >  SRR4302543.7905375/1‑94 (MQ=60)
             TTACAATGTCATTAGTTGTGAACAAAGCACCTGGTCGCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCG                                                                                 >  SRR4302543.5554319/1‑94 (MQ=60)
              TACAATGTCATTAGTTGTGAACAAAGCACCTGGTCGCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGA                                                                                >  SRR4302543.7705086/1‑94 (MQ=60)
              TACAATGTCATTAGTTGTGAACAAAGCACCTGGTCGCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGA                                                                                >  SRR4302543.6038992/1‑94 (MQ=60)
                CAATGTCATTAGTTGTGAACAAAGCACCTGGTCGCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAA                                                                              >  SRR4302543.7946449/1‑94 (MQ=60)
                CAATGTCATTAGTTGTGAACAAAGCACCTGGTCGCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAA                                                                              >  SRR4302543.3604300/1‑94 (MQ=60)
                CAATGTCATTAGTTGTGAACAAAGCACCTGGTCGCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAA                                                                              >  SRR4302543.7398074/1‑94 (MQ=60)
                 AATGTCATTAGTTGTGAACAAAGCACCTGGTCGCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAAA                                                                             >  SRR4302543.1645427/1‑94 (MQ=60)
                  ATGTCATTAGTTGTGAACAAAGCACCTGGTCGCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAAAA                                                                            >  SRR4302543.3638621/1‑94 (MQ=60)
                   TGTCATTAGTTGTGAACAAAGCACCTGGTCGCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAAAAA                                                                           <  SRR4302543.6252015/94‑1 (MQ=60)
                   TGTCATTAGTTGTGAACAAAGCACCTGGTCGCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAAAAA                                                                           <  SRR4302543.7201039/94‑1 (MQ=60)
                    GTCATTAGTTGTGAACAAAGCACCTGGTCGCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAAAAAA                                                                          >  SRR4302543.4551758/1‑94 (MQ=60)
                    GTCATTAGTTGTGAACAAAGCACCTGGTCGCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAAAAAA                                                                          >  SRR4302543.6392076/1‑94 (MQ=60)
                    GTCATTAGTTGTGAACAAAGCACCTGGTCGCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAAAAAA                                                                          >  SRR4302543.7995098/1‑94 (MQ=60)
                    GTCATTAGTTGTGAACAAAGCACCTGGTCGCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAAAAAA                                                                          >  SRR4302543.7262172/1‑94 (MQ=60)
                    GTCATTAGTTGTGAACAAAGCACCTGGTCGCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAAAAAA                                                                          >  SRR4302543.2258943/1‑94 (MQ=60)
                      CATTAGTTGTGAACAAAGCACCTGGTCGCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACG                                                                        >  SRR4302543.5322044/1‑94 (MQ=60)
                      CATTAGTTGTGAACAAAGCACCTGGTCGCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACG                                                                        >  SRR4302543.1567313/1‑94 (MQ=60)
                       ATTAGTTGTGAACAAAGCACCTGGTCGCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGA                                                                       >  SRR4302543.154472/1‑94 (MQ=60)
                       ATTAGTTGTGAACAAAGCACCTGGTCGCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGA                                                                       <  SRR4302543.7363328/94‑1 (MQ=60)
                        TTAGTTGTGAACAAAGCACCTGGTCGCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAA                                                                      <  SRR4302543.6548816/94‑1 (MQ=60)
                        TTAGTTGTGAACAAAGCACCTGGTCGCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAA                                                                      <  SRR4302543.6179704/94‑1 (MQ=60)
                         TAGTTGTGAACAAAGCACCTGGTCGCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAA                                                                     <  SRR4302543.7618016/94‑1 (MQ=60)
                          AGTTGTGAACAAAGCACCTGGTCGCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAAT                                                                    >  SRR4302543.4166603/1‑94 (MQ=60)
                          AGTTGTGAACAAAGCACCTGGTCGCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAAT                                                                    <  SRR4302543.2092869/94‑1 (MQ=60)
                          AGTTGTGAACAAAGCACCTGGTCGCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAAT                                                                    >  SRR4302543.2482472/1‑94 (MQ=60)
                          AGTTGTGAACAAAGCACCTGGTCGCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAAT                                                                    >  SRR4302543.7328792/1‑94 (MQ=60)
                          AGTTGTGAACAAAGCACCTGGTCGCGCATACTAGGGGCTATAAACTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAAT                                                                    <  SRR4302543.4916369/94‑1 (MQ=60)
                           GTTGTGAACAAAGCACCTGGTCGCGCATACTAGGGGCTATAAATTTATTTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATC                                                                   >  SRR4302543.5854122/1‑94 (MQ=60)
                           GTTGTGAACAAAGCACCTGGTCGCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATC                                                                   >  SRR4302543.3190673/1‑94 (MQ=60)
                           GTTGTGAACAAAGCACCTGGTCGCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATC                                                                   <  SRR4302543.5360881/94‑1 (MQ=60)
                            TTGTGAACAAAGCACCTGGTCGCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCA                                                                  >  SRR4302543.2596955/1‑94 (MQ=60)
                             TGTGAACAAAGCACCTGGTCGCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCGATCGCAAGAAAGAAGTCGAAAAAAACGAAATCAA                                                                 <  SRR4302543.6588871/94‑1 (MQ=60)
                             TGTGAACAAAGCACCTGGTCGCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAA                                                                 <  SRR4302543.518565/94‑1 (MQ=60)
                             TGTGAACAAAGCACCTGGTCGCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAA                                                                 <  SRR4302543.4850375/94‑1 (MQ=60)
                               TGAACAAAGCACCTGGTCGCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAAC                                                               <  SRR4302543.519022/94‑1 (MQ=60)
                               TGAACAAAGCACCTGGTCGCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAAC                                                               <  SRR4302543.1516373/94‑1 (MQ=60)
                               TGAACAAAGCACCTGGTCGCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAAC                                                               <  SRR4302543.5710571/94‑1 (MQ=60)
                               TGAACAAAGCACCTGGTCGCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAAC                                                               <  SRR4302543.5972602/94‑1 (MQ=60)
                               TGAACAAAGCACCTGGTCGCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAAC                                                               <  SRR4302543.7131982/94‑1 (MQ=60)
                                GAACAAAGCACCTGGTCGCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACG                                                              >  SRR4302543.5580338/1‑94 (MQ=60)
                                GAACAAAGCACCTGGTCGCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACG                                                              <  SRR4302543.7019953/94‑1 (MQ=60)
                                GAACAAAGCACCTGGTCGCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACG                                                              <  SRR4302543.6883908/94‑1 (MQ=60)
                                    AAAGCACCTGGTCGCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTC                                                          >  SRR4302543.1960945/1‑94 (MQ=60)
                                    AAAGCACCTGGTCGCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTC                                                          >  SRR4302543.2979240/1‑94 (MQ=60)
                                    AAAGCACCTGGTCGCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTC                                                          >  SRR4302543.3014657/1‑94 (MQ=60)
                                     AAGCACCTGGTCGCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTCA                                                         <  SRR4302543.4461469/94‑1 (MQ=60)
                                      AGCACCTGGTCGCGCATACTAGGGTCTATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTCAG                                                        <  SRR4302543.2928760/94‑1 (MQ=60)
                                      AGCACCTGGTCGCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTCAG                                                        >  SRR4302543.7011678/1‑94 (MQ=60)
                                      AGCACCTGGTCGCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTCAG                                                        <  SRR4302543.2928759/94‑1 (MQ=60)
                                       GCACCTGGTCGCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTCAGC                                                       <  SRR4302543.6945821/94‑1 (MQ=60)
                                       GCACCTGGTCGCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTCAGC                                                       >  SRR4302543.5414645/1‑94 (MQ=60)
                                       GCACCTGGTCGCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTCAGC                                                       <  SRR4302543.3256554/94‑1 (MQ=60)
                                        CACCTGGTCGCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTCAGCG                                                      >  SRR4302543.7894301/1‑94 (MQ=60)
                                        CACCTGGTCGCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTCAGCG                                                      >  SRR4302543.1336491/1‑94 (MQ=60)
                                        CACCTGGTCGCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTCAGCG                                                      <  SRR4302543.7473722/94‑1 (MQ=60)
                                        CACCTGGTCGCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTCAGCG                                                      <  SRR4302543.779220/94‑1 (MQ=60)
                                        CACCTGGTCGCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTCAGCG                                                      >  SRR4302543.2237002/1‑94 (MQ=60)
                                         ACCTGGTCGCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTCAGCGA                                                     <  SRR4302543.3152127/94‑1 (MQ=60)
                                         ACCTGGTCGCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTCAGCGA                                                     <  SRR4302543.3152126/94‑1 (MQ=60)
                                         ACCTGGTCGCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTCAGCGA                                                     >  SRR4302543.6385714/1‑94 (MQ=60)
                                          CCTGGTCGCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTCAGCGAT                                                    >  SRR4302543.6768796/1‑94 (MQ=60)
                                           CTGGTCGCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTCAGCGATC                                                   >  SRR4302543.3706230/1‑94 (MQ=60)
                                           CTGGTCGCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTCAGCGATC                                                   <  SRR4302543.3276666/94‑1 (MQ=60)
                                           CTGGTCGCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTCAGCGATC                                                   >  SRR4302543.1434831/1‑94 (MQ=60)
                                           CTGGTCGCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTCAGCGATC                                                   >  SRR4302543.7335923/1‑94 (MQ=60)
                                           CTGGTCGCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTCAGCGATC                                                   <  SRR4302543.4503292/94‑1 (MQ=60)
                                             GGTCGCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTCAGCGATCGC                                                 >  SRR4302543.3537988/1‑94 (MQ=60)
                                                CGCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTCAGCGATCGCCTG                                              <  SRR4302543.6532287/94‑1 (MQ=60)
                                                CGCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTCAGCGATCGCCTG                                              <  SRR4302543.1641182/94‑1 (MQ=60)
                                                CGCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTCAGCGATCGCCTG                                              <  SRR4302543.4920545/94‑1 (MQ=60)
                                                 GCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTCAGCGATCGCCTGG                                             >  SRR4302543.5928140/1‑94 (MQ=60)
                                                 GCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTCAGCGATCGCCTGG                                             >  SRR4302543.3969013/1‑94 (MQ=60)
                                                  CGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTCAGCGATCGCCTGGA                                            >  SRR4302543.5778451/1‑94 (MQ=60)
                                                   GCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTCAGCGATCGCCTGGAC                                           <  SRR4302543.7878538/94‑1 (MQ=60)
                                                    CATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTCAGCGATCGCCTGGACG                                          >  SRR4302543.6590218/1‑94 (MQ=60)
                                                    CATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTCAGCGATCGCCTGGACG                                          >  SRR4302543.1315277/1‑94 (MQ=60)
                                                     ATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTCAGCGATCGCCTGGACGC                                         >  SRR4302543.14250/1‑94 (MQ=60)
                                                     ATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTCAGCGATCGCCTGGACGC                                         >  SRR4302543.3618539/1‑94 (MQ=60)
                                                     ATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTCAGCGATCGCCTGGACGC                                         >  SRR4302543.2432958/1‑94 (MQ=60)
                                                        CTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTCAGCGATCGCCTGGACGCCAT                                      >  SRR4302543.7721601/1‑94 (MQ=60)
                                                         TAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTCAGCGATCGCCTGGACGCCATC                                     <  SRR4302543.7240332/94‑1 (MQ=60)
                                                         TAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTCAGCGATCGCCTGGACGCCATC                                     <  SRR4302543.1560996/94‑1 (MQ=60)
                                                          AGNGGCTNTAAATTTATCTTTNTCAGAAGCCACCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTCAGCGATCGCCTGGACGCCATCC                                    <  SRR4302543.4554188/94‑1 (MQ=60)
                                                          AGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAAAAATCGAAATCAAACGCCTCAGCGATCGCCTGGACGCCATCC                                    <  SRR4302543.1932638/94‑1 (MQ=60)
                                                          AGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTCAGCGATCGCCTGGACGCCATCC                                    <  SRR4302543.7824423/94‑1 (MQ=60)
                                                           GGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTCAGCGATCGCCTGGACGCCATCCG                                   <  SRR4302543.1031966/94‑1 (MQ=60)
                                                           GGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTCAGCGATCGCCTGGACGCCATCCG                                   >  SRR4302543.1577800/1‑94 (MQ=60)
                                                            GGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTCAGCGATCGCCTGGACGCCATCCGC                                  >  SRR4302543.3960041/1‑94 (MQ=60)
                                                            GGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTCAGCGATCGCCTGGACGCCATCCGC                                  >  SRR4302543.4026919/1‑94 (MQ=60)
                                                            GGGCTATAAATTTATATTTATCAGAAGCCATCGCATGAAAGAAGACGGAAAAAAAGAAATCAAAGGCCTCAGCGATCGCCTGGACGGCATCCGA                                  >  SRR4302543.4026920/1‑94 (MQ=60)
                                                              GCTATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTCAGCGATCGCCTGGACGCCATCCGCCA                                <  SRR4302543.7296315/94‑1 (MQ=60)
                                                              GCTATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTCAGCGATCGCCTGGACGCCATCCGCCA                                >  SRR4302543.3855155/1‑94 (MQ=60)
                                                               CTATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTCAGCGATCGCCTGGACGCCATCCGCCAC                               <  SRR4302543.2182606/94‑1 (MQ=60)
                                                               CTATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTCAGCGATCGCCTGGACGCCATCCGCCAC                               >  SRR4302543.660549/1‑94 (MQ=60)
                                                                 ATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTCAGCGATCGCCTGGACGCCATCCGCCACCA                             >  SRR4302543.4198910/1‑94 (MQ=60)
                                                                 ATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTCAGCGATCGCCTGGACGCCATCCGCCACCA                             >  SRR4302543.3872288/1‑94 (MQ=60)
                                                                 ATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTCAGCGATCGCCTGGACGCCATCCGCCACCA                             <  SRR4302543.363276/94‑1 (MQ=60)
                                                                  TAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTCAGCGATCGCCTGGACGCCATCCGCCACCAG                            >  SRR4302543.1768717/1‑94 (MQ=60)
                                                                  TAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTCAGCGATCGCCTGGACGCCATCCGCCACCAG                            <  SRR4302543.3880142/94‑1 (MQ=60)
                                                                   AAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTCAGCGATCGCCTGGACGCCATCCGCCACCAGC                           >  SRR4302543.6335062/1‑94 (MQ=60)
                                                                   AAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTCAGCGATCGCCTGGACGCCATCCGCCACCAGC                           <  SRR4302543.7707001/94‑1 (MQ=60)
                                                                   AAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTCAGCGATCGCCTGGACGCCATCCGCCACCAGC                           <  SRR4302543.295328/94‑1 (MQ=60)
                                                                    AATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTCAGCGATCGCCTGGACGCCATCCGCCACCCGCA                          >  SRR4302543.7063644/1‑94 (MQ=60)
                                                                    AATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTCAGCGATCGCCTGGACGCCATCCGCCACCAGCA                          <  SRR4302543.6255475/94‑1 (MQ=60)
                                                                    AATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTCAGCGATCGCCTGGACGCCATCCGCCACCAGCA                          <  SRR4302543.5596475/94‑1 (MQ=60)
                                                                    AATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTCAGCGATCGCCTGGACGCCATCCGCCACCAGCA                          >  SRR4302543.1736285/1‑94 (MQ=60)
                                                                     ATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTCAGCGATCGCCTGGACGCCATCCGCCACCAGCAG                         <  SRR4302543.495403/94‑1 (MQ=60)
                                                                     ATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTCAGCGATCGCCTGGACGCCATCCGCCACCAGCAG                         <  SRR4302543.3212252/94‑1 (MQ=60)
                                                                     ATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACCAAATCAAACGCCTCAGCGATCGCCTGGACGCCATCCGCCACCAGCAG                         >  SRR4302543.7884646/1‑94 (MQ=60)
                                                                      TTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTCAGCGATCGCCTGGACGCCATCCGCCACCAGCAGG                        >  SRR4302543.3937007/1‑94 (MQ=60)
                                                                      TTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTCAGCGATCGCCTGGACGCCATCCGCCACCAGCAGG                        >  SRR4302543.5115529/1‑94 (MQ=60)
                                                                      TTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTCAGCGATCGCCTGGACGCCATCCGCCACCAGCAGG                        <  SRR4302543.7824552/94‑1 (MQ=60)
                                                                      TTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTCAGCGATCGCCTGGACGCCATCCGCCACCAGCAGG                        >  SRR4302543.4201213/1‑94 (MQ=60)
                                                                       TTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTCAGCGATCGCCTGGACGCCATCCGCCACCAGCAGGC                       >  SRR4302543.171456/1‑94 (MQ=60)
                                                                       TTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTCAGCGATCGCCTGGACGCCATCCGCCACCAGCAGGC                       >  SRR4302543.4385755/1‑94 (MQ=60)
                                                                         ATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTCAGCGATCGCCTGGACGCCATCCGCCACCAGCAGGCCG                     >  SRR4302543.1779625/1‑94 (MQ=60)
                                                                         ATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTCAGCGATCGCCTGGACGCCATCCGCCACCAGCAGGCCG                     >  SRR4302543.6897/1‑94 (MQ=60)
                                                                           CTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTCAGCGATCGCCTGGACGCCATCCGCCACCAGCAGGCCGAT                   <  SRR4302543.6330475/94‑1 (MQ=60)
                                                                             TTATCAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTCAGCGATCGCCTGGACGCCATCCGCCACCAGCAGGCCGATCT                 <  SRR4302543.2596318/94‑1 (MQ=60)
                                                                             TTATCAGAAGCCATCGCATGAAAGAAGGCGAAAAAAACGAAATCAAACGCCTCAGCGATCGCCTGGACGCCATCCGCCACCAGCAGGCCGATCT                 <  SRR4302543.2596319/94‑1 (MQ=60)
                                                                               ATCAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTCAGCGATCGCCTGGACGCCATCCGCCACCAGCAGGCCGATCTTT               >  SRR4302543.3132153/1‑94 (MQ=60)
                                                                               ATCAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTCAGCGATCGCCTGGACGCCATCCGCCACCAGCAGGCCGATCTTT               >  SRR4302543.1549436/1‑94 (MQ=60)
                                                                               ATCAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTCAGCGATCGCCTGGACGCCATCCGCCACCAGCAGGCCGATCTTT               <  SRR4302543.5276866/94‑1 (MQ=60)
                                                                               ATCAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTCAGCGATCGCCTGGACGCCATCCGCCACCAGCAGGCCGATCTTT               >  SRR4302543.3132154/1‑94 (MQ=60)
                                                                                TCAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTCAGCGATCGCCTGGACGCCATCCGCCACCAGCAGGCCGATCTTTC              >  SRR4302543.795916/1‑94 (MQ=60)
                                                                                 CAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTCAGCGATCGCCTGGACGCCATCCGCCACCAGCAGGCCGATCTTTCG             >  SRR4302543.1243415/1‑94 (MQ=60)
                                                                                 CAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTCAGCGATCGCCTGGACGCCATCCGCCACCAGCAGGCCGATCTTTCG             <  SRR4302543.2009039/94‑1 (MQ=60)
                                                                                 CAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTCAGCGATCGCCTGGACGCCATCCGCCACCAGCAGGCCGATCTTTCG             >  SRR4302543.683877/1‑94 (MQ=60)
                                                                                 CAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTCAGCGATCGCCTGGACGCCATCCGCCACCAGCAGGCCGATCTTTCG             >  SRR4302543.139259/1‑94 (MQ=60)
                                                                                   GAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTCAGCGATCGCCTGGACGCCATCCGCCACCAGCAGGCCGATCTTTCGCT           <  SRR4302543.855758/94‑1 (MQ=60)
                                                                                   GAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTCAGCGATCGCCTGGACGCCATCCGCCACCAGCAGGCCGATCTTTCGCT           <  SRR4302543.7460232/94‑1 (MQ=60)
                                                                                   GAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTCAGCGATCGCCTGGACGCCATCCGCCACCAGCAGGCCGATCTTTCGCT           <  SRR4302543.7460233/94‑1 (MQ=60)
                                                                                   GAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTCAGCGATCGCCTGGACGCCATCCGCCACCAGCAGGCCGATCTTTCGCT           <  SRR4302543.2869732/94‑1 (MQ=60)
                                                                                    AAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTCAGCGATCGCCTGGACGCCATCCGCCACCAGCAGGCCGATCTTTCGCTG          <  SRR4302543.6150118/94‑1 (MQ=60)
                                                                                    AAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTCAGCGATCGCCTGGACGCCATCCGCCACCAGCAGGCCGATCTTTCGCTG          >  SRR4302543.5538000/1‑94 (MQ=60)
                                                                                     AGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTCAGCGATCGCCTGGACGCCATCCGCCACCAGCAGGCCGATCTTTCGCTGG         >  SRR4302543.6000370/1‑94 (MQ=60)
                                                                                      GCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTCAGCGATCGCCTGTACGCCATCCGCCACCAGCAGGCCGATCTTTCGCTGGT        <  SRR4302543.713775/94‑1 (MQ=60)
                                                                                      GCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTCAGCGATCGCCTGGACGCCATCCGCCACCAGCAGGCCGATCTTTCGCTGGT        >  SRR4302543.2199443/1‑94 (MQ=60)
                                                                                       CCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTCAGCGATCGCCTGGACGCCATCCGCCACCAGCAGGCCGATCTTTCGCTGGTT       <  SRR4302543.63987/94‑1 (MQ=60)
                                                                                        CATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTCAGCGATCGCCTGGACGCCATCCGCCACCAGCAGGCCGATCTTTCGCTGGTTG      >  SRR4302543.5609238/1‑94 (MQ=60)
                                                                                        CATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTCAGCGATCGCCTGGACGCCATCCGCCACCAGCAGGCCGATCTTTCGCTGGTTG      >  SRR4302543.7975451/1‑94 (MQ=60)
                                                                                        CATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTCAGCGATCGCCTGGACGCCATCCGCCACCAGCAGGCCGATCTTTCGCTGGTTG      <  SRR4302543.4621107/94‑1 (MQ=60)
                                                                                         ATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTCAGCGATCGCCTGGACGCCATCCGCCACCAGCAGGCCGATCTTTCGCTGGTTGA     >  SRR4302543.7010629/1‑94 (MQ=60)
                                                                                         ATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTCAGCGATCGCCTGGACGCCATCCGCCACCAGCAGGCCGATCTTTCGCTGGTTGA     >  SRR4302543.6889655/1‑94 (MQ=60)
                                                                                         ATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTCAGCGATCGCCTGGACGCCATCCGCCACCAGCAGGCCGATCTTTCGCTGGTTGA     >  SRR4302543.4666326/1‑94 (MQ=60)
                                                                                           CGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTCAGCGATCGCCTGGACGCCATCCGCCACCAGCAGGCCGATCTTTCGCTGGTTGAAG   >  SRR4302543.1638236/1‑94 (MQ=60)
                                                                                           CGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTCAGCGATCGCCTGGACGCCATCCGCCACCAGCAGGCCGATCTTTCGCTGGTTGAAG   <  SRR4302543.5679124/94‑1 (MQ=60)
                                                                                           CGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTCAGCGATCGCCTGGACGCCATCCGCCACCAGCAGGCCGATCTTTCGCTGGTTGAAG   >  SRR4302543.7783698/1‑94 (MQ=60)
                                                                                           CGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTCAGCGATCGCCTGGACGCCATCCGCCACCAGCAGGCCGATCTTTCGCTGGTTGAAG   <  SRR4302543.5047907/94‑1 (MQ=60)
                                                                                            GCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTCAGCGATCGCCTGGACGCCATCCGCCACCAGCAGGCCGATCTTTCGCTGGTTGAAGC  >  SRR4302543.3996513/1‑94 (MQ=60)
                                                                                            GCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTCAGCGATCGCCTGGACGCCATCCGCCACCAGCAGGCCGATCTTTCGCTGGTTGAAGC  <  SRR4302543.7794095/94‑1 (MQ=60)
                                                                                            GCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTCAGCGATCGCCTGGACGCCATCCGCCACCAGCAGGCCGATCTTTCGCTGGTTGAAGC  >  SRR4302543.7503566/1‑94 (MQ=60)
                                                                                            GCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTCAGCGATCGCCTGGACGCCATCCGCCACCAGCAGGCCGATCTTTCGCTGGTTGAAGC  >  SRR4302543.17600/1‑94 (MQ=60)
                                                                                            |                                                                                             
CGTTACAGAACTATTACAATGTCATTAGTTGTGAACAAAGCACCTGGTCGCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCACATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTCAGCGATCGCCTGGACGCCATCCGCCACCAGCAGGCCGATCTTTCGCTGGTTGAAGC  >  NC_000913/3774198‑3774383

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 17 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: