Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
1873 |
183.1 |
9376148 |
98.2% |
9207377 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
3,774,290 |
A→G |
intergenic (‑283/‑2) |
b4550 ← / → yibL |
hypothetical protein/hypothetical protein |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 3,774,290 | 0 | A | G | 100.0%
| 629.2
/ NA
| 197 | intergenic (‑283/‑2) | b4550/yibL | hypothetical protein/hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (129/68); total (129/68) |
Only 100 of 199 total aligned reads displayed.
TTACAGAACTATTACAATGTCATTAGTTGTGAACAAAGCACCTGGTCGCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCACATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTCAGCGATCGCCTGGACGCCATCCGCCACCAGCAGGCCGATCTTTCGCTGGTTG > NC_000913/3774200‑3774379
|
ttACAGAACTATTACAATGTCATTAGTTGTGAACAAAGCACCTGGTCGCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATcgca < 1:82751/93‑1 (MQ=255)
cAGAACTATTACAATGTCATTAGTTGTGAACAAAGCACCTGGTCGCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGa < 2:3907299/93‑1 (MQ=255)
cAGAACTATTACAATGTCATTAGTTGTGAACAAAGCACCTGGTCGCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGa > 1:1907313/1‑93 (MQ=255)
gAACTATTACAATGTCATTAGTTGTGAACAAAGCACCTGGTCGCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGaaa > 2:3427039/1‑93 (MQ=255)
cTATTACAATGTCATTAGTTGTGAACAAAGCACCTGGTCGCGCATACTAGGGGCTATAAATTTATCTTTATCAGCAGCCATCGCATGAaagaa > 2:1259980/1‑93 (MQ=255)
cTATTACAATGTCATTAGTTGTGAACAAAGCACCTGGTCGCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAaagaa < 1:4244252/93‑1 (MQ=255)
cTATTACAATGTCATTAGTTGTGAACAAAGCACCTGGTCGCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAaagaa > 2:1671684/1‑93 (MQ=255)
cTATTACAATGTCATTAGTTGTGAACAAAGCACCTGGTCGCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAaagaa < 2:560801/93‑1 (MQ=255)
cTATTACAATGTCATTAGTTGTGAACAAAGCACCTGGTCGCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAaagaa < 1:1277443/93‑1 (MQ=255)
tATTACAATGTCATTAGTTGTGAACAAAGCACCTGGTCGCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAaagaag > 1:4155953/1‑93 (MQ=255)
aTTACAATGTCATTAGTTGTGAACAAAGCACCTGGTCGCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGt > 2:1346010/1‑93 (MQ=255)
ttACAATGTCATTAGTTGTGAACAAAGCACCTGGTCGCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTc < 2:1934462/93‑1 (MQ=255)
ttACAATGTCATTAGTTGTGAACAAAGCACCTGGTCGCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTc < 1:2560051/93‑1 (MQ=255)
ttACAATGTCATTAGTTGTGAACAAAGCACCTGGTCGCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTc < 1:4576479/93‑1 (MQ=255)
aCAATGTCATTAGTTGTGAACAAAGCACCTGGTCGCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGa < 1:116982/93‑1 (MQ=255)
cAATGTCATTAGTTGTGAACAAAGCACCTGGTCGCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGaa > 1:2240729/1‑93 (MQ=255)
aTGTCATTAGTTGTGAACAAAGCACCTGGTCGCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGaaaa > 2:1482698/1‑93 (MQ=255)
aTGTCATTAGTTGTGAACAAAGCACCTGGTCGCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGaaaa > 1:605340/1‑93 (MQ=255)
tGTCATTAGTTGTGAACAAAGCACCTGGTCGCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGaaaaa > 1:585981/1‑93 (MQ=255)
gTCATTAGTTGTGAACAAAGCACCTGGTCGCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGaaaaaa > 1:4475134/1‑93 (MQ=255)
cATTAGTTGTGAACAAAGCACCTGGTCGCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAAAAAAc > 2:3720078/1‑93 (MQ=255)
ttAGTTGTGAACAAAGCACCTGGTCGCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGa > 2:755803/1‑93 (MQ=255)
ttAGTTGTGAACAAAGCACCTGGTCGCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGa > 2:462897/1‑93 (MQ=255)
ttAGTTGTGAACAAAGCACCTGGTCGCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGa < 2:2479166/93‑1 (MQ=255)
ttAGTTGTGAACAAAGCACCTGGGCTCGCATACTAGTGGCTATTTATTTATCCTGATCAGAAGCCATCGCATGAAAGGAGGCGAAAAAAACGa > 2:1424352/1‑93 (MQ=255)
tAGTTGTGAACAAAGCACCTGGTCGCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGaa > 1:3691874/1‑93 (MQ=255)
aGTTGTGAACAAAGCACCTGGTCGCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGaaa > 2:1603209/1‑93 (MQ=255)
aGTTGTGAACAAAGCACCTGGTCGCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGaaa < 2:2445318/93‑1 (MQ=255)
gTTGTGAACAAAGCACCTGGTCGCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAAt > 2:1288179/1‑93 (MQ=255)
gTTGTGAACAAAGCACCTGGTCGCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAAt > 2:831432/1‑93 (MQ=255)
gTTGTGAACAAAGCACCTGGTCGCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAAt < 1:1458973/93‑1 (MQ=255)
gTTGTGAACAAAGCACCTGGTCGCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAAt < 2:4442528/93‑1 (MQ=255)
ttGTGAACAAAGCACCTGGTCGCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATc < 2:2980120/93‑1 (MQ=255)
gtgAACAAAGCACCTGGTCGCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCaa > 2:1999661/1‑93 (MQ=255)
tgAACAAAGCACCTGGTCGCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCaaa < 1:3750069/93‑1 (MQ=255)
tgAACAAAGCACCTGGTCGCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCaaa < 1:1482949/93‑1 (MQ=255)
gAACAAAGCACCTGGTCGCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAAc > 1:89331/1‑93 (MQ=255)
gAACAAAGCACCTGGTCGCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAAc > 1:3306515/1‑93 (MQ=255)
gAACAAAGCACCTGGTCGCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAAc > 2:3232643/1‑93 (MQ=255)
aCAAAGCACCTGGTCGCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGc > 2:1470988/1‑93 (MQ=255)
aCAAAGCACCTGGTCGCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATAGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGc > 2:1566569/1‑93 (MQ=255)
cAAAGCACCTGGTCGCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGcc < 2:2922526/93‑1 (MQ=255)
aaaGCACCTGGTCGCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCt < 1:1343294/93‑1 (MQ=255)
aaGCACCTGGTCGCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTc > 2:3074629/1‑93 (MQ=255)
aaGCACCTGGTCGCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTc < 2:3323911/93‑1 (MQ=255)
aGCACCTGGTCGCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTCa < 1:2050819/93‑1 (MQ=255)
gCACCTGGTCGCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTCAg < 2:2506553/93‑1 (MQ=255)
gCACCTGGTCGCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTCAg > 2:2676264/1‑93 (MQ=255)
cACCTGGTCGCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTCAGc < 1:2766414/93‑1 (MQ=255)
cACCTGGTCGCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTCAGc < 1:3634423/93‑1 (MQ=255)
cACCTGGTCGCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTCAGc > 2:1408674/1‑93 (MQ=255)
aCCTGGTCGCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTCAGCg > 2:487648/1‑93 (MQ=255)
aCCTGGTCGCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTCAGCg > 2:92996/1‑93 (MQ=255)
aCCTGGTCGCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTCAGCg > 1:934859/1‑93 (MQ=255)
aCCTGGTCGCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTCAGCg > 1:3446810/1‑93 (MQ=255)
ccTGGTCGCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTCAGCGa > 2:670007/1‑93 (MQ=255)
ccTGGTCGCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTCAGCGa < 2:4036367/93‑1 (MQ=255)
ccTGGTCGCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTCAGCGa > 1:2640091/1‑93 (MQ=255)
ccTGGTCGCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTCAGCGa > 1:3956920/1‑93 (MQ=255)
cTGGTCGCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTCAGCGAt > 1:2753519/1‑93 (MQ=255)
cTGGTCGCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTCAGCGAt > 2:3217368/1‑93 (MQ=255)
tGGTCGCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTCAGCGATc < 2:451175/93‑1 (MQ=255)
ggTCGCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTCAGCGATCg < 2:3604580/93‑1 (MQ=255)
tCGCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTCAGCGATCGcc > 1:2396177/1‑93 (MQ=255)
cgcgCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTCAGCGATCGCCt > 2:4405432/1‑93 (MQ=255)
aTACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTCAGCGATCGCCTGGACg > 2:2363945/1‑93 (MQ=255)
tACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTCAGCGATCGCCTGGACGc < 2:1892641/93‑1 (MQ=255)
tAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTCAGCGATCGCCTGGACGCCAt > 1:1008364/1‑93 (MQ=255)
tAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTCAGCGATCGCCTGGACGCCAt > 2:1784659/1‑93 (MQ=255)
cTATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTCAGCGATCGCCTGGACGCCATCCGcca > 2:2307152/1‑93 (MQ=255)
tataAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTCAGCGATCGCCTGGACGCCATCCGccac < 2:429383/93‑1 (MQ=255)
tataAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTCAGCGATCGCCTGGACGCCATCCGccac > 1:384943/1‑93 (MQ=255)
tataAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTCAGCGATCGCCTGGACGCCATCCGccac > 1:3902672/1‑93 (MQ=255)
ataAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTCAGCGATCGCCTGGACGCCATCCGccacc > 2:3883278/1‑93 (MQ=255)
taAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTCAGCGATCGCCTGGACGCCATCCGccacca > 1:1124141/1‑93 (MQ=255)
taAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTCAGCGATCGCCTGGACGCCATCCGccacca < 2:4586484/93‑1 (MQ=255)
taAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTCAGCGATCGCCTGGACGCCATCCGccacca < 1:2844697/93‑1 (MQ=255)
taAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTCAGCGATCGCCTGGACGCCATCCGccacca < 2:3384136/93‑1 (MQ=255)
aaTTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTCAGCGATCGCCTGGACGCCATCCGCCACcagc > 1:4006863/1‑93 (MQ=255)
aaTTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTCAGCGATCGCCTGGACGCCATCCGCCACcagc < 2:1150515/93‑1 (MQ=255)
aTTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTCAGCGATCGCCTGGACGCCATCCGCCACcagca > 2:2208807/1‑93 (MQ=255)
tatctttatcAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTCAGCGATCGCCTGGACGCCATCCGCCACCAGCAGGc > 2:3941688/1‑93 (MQ=255)
atctttatcAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTCAGCGATCGCCTGGACGCCATCCGCCACCAGCAGGcc < 1:588942/93‑1 (MQ=255)
tttatcAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTCAGCGATCGCCTGGACGCCATCCGCCACCAGCAGGCCGAt > 1:3662141/1‑93 (MQ=255)
tttatcAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTCAGCGATCGCCTGGACGCCATCCGCCACCAGCAGGCCGAt < 1:2063294/93‑1 (MQ=255)
tatcAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTCAGCGATCGCCTGGACGCCATCCGCCACCAGCAGGCCGATCt < 2:3632202/93‑1 (MQ=255)
atcAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTCAGCGATCGCCTGGACGCCATCCGCCACCAGCAGGCCGATCtt > 1:1827071/1‑93 (MQ=255)
tcAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTCAGCGATCGCCTGGACGCCATCCGCCACCAGCAGGCCGATCttt > 1:1606378/1‑93 (MQ=255)
tcAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTCAGCGATCGCCTGGACGCCATCCGCCACCAGCAGGCCGATCttt < 2:2026537/93‑1 (MQ=255)
cAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTCAGCGATCGCCTGGACGCCATCCGCCACCAGCAGGCCGATCTTTc < 1:3612602/93‑1 (MQ=255)
aGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTCAGCGATCGCCTGGACGCCATCCGCCACCAGCAGGCCGATCTTTcc > 1:2425428/1‑92 (MQ=255)
gAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTCAGCGATCGCCTGGACGCCATCCGCCACCAGCAGGCCGATCTTTCGc > 1:497345/1‑93 (MQ=255)
aaGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTCAGCGATCGCCTGGACGCCATCCGCCACCAGCAGGCCGATCTTTCGCt > 2:314668/1‑93 (MQ=255)
gCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTCAGCGATCGCCTGGACGCCATCCGCCACCAGCAGGCCGATCTTTCGCTgg > 2:3013878/1‑93 (MQ=255)
gCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTCAGCGATCGCCTGGACGCCATCCGCCACCAGCAGGCCGATCTTTCGCTgg > 2:4070916/1‑93 (MQ=255)
gCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTCAGCGATCGCCTGGACGCCATCCGCCACCAGCAGGCCGATCTTTCGCTgg < 1:2610771/93‑1 (MQ=255)
aTCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTCAGCGATCGCCTGGACGCCATCCGCCACCAGCAGGCCGATCTTTCGCTGGTTg > 1:1598316/1‑93 (MQ=255)
aTCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTCAGCGATCGCCTGGACGCCATCCGCCACCAGCAGGCCGATCTTTCGCTGGTTg > 1:4337615/1‑93 (MQ=255)
aTCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTCAGCGATCGCCTGGACGCCATCCGCCACCAGCAGGCCGATCTTTCGCTGGTTg > 1:3565062/1‑93 (MQ=255)
aTCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTCAGCGATCGCCTGGACGCCATCCGCCACCAGCAGGCCGATCTTTCGCTGGTTg > 1:104277/1‑93 (MQ=255)
|
TTACAGAACTATTACAATGTCATTAGTTGTGAACAAAGCACCTGGTCGCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCACATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTCAGCGATCGCCTGGACGCCATCCGCCACCAGCAGGCCGATCTTTCGCTGGTTG > NC_000913/3774200‑3774379
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
TTACAGAACTATTACAATGTCATTAGTTGTGAACAAAGCACCTGGTCGCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCACATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTCAGCGATCGCCTGGACGCCATCCGCCACCAGCAGGCCGATCTTTCGCTGGTTGAAGC > NC_000913/3774200‑3774383
|
TTACAGAACTATTACAATGTCATTAGTTGTGAACAAAGCACCTGGTCGCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCAT < SRR4302535.83336/94‑1 (MQ=60)
TACAGAACTATTACAATGTCATTAGTTGTGAACAAAGCACCTGGTCGCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATG < SRR4302535.3975551/94‑1 (MQ=60)
TACAGAACTATTACAATGTCATTAGTTGTGAACAAAGCACCTGGTCGCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATG > SRR4302535.1188515/1‑94 (MQ=60)
ACAGAACTATTACAATGTCATTAGTTGTGAACAAAGCACCTGGTCGCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGA > SRR4302535.1921038/1‑94 (MQ=60)
CAGAACTATTACAATGTCATTAGTTGTGAACAAAGCACCTGGTCGCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAA > SRR4302535.3404636/1‑94 (MQ=60)
AGAACTATTACAATGTCATTAGTTGTGAACAAAGCACCTGGTCGCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAAA > SRR4302535.2828049/1‑94 (MQ=60)
AGAACTATTACAATGTCATTAGTTGTGAACAAAGCACCTGGTCGCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAAA < SRR4302535.3656277/94‑1 (MQ=60)
AACTATTACAATGTCATTAGTTGTGAACAAAGCACCTGGTCGCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGA > SRR4302535.3597218/1‑94 (MQ=60)
AACTATTACAATGTCATTAGTTGTGAACAAAGCACCTGGTCGCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGA > SRR4302535.4222364/1‑94 (MQ=60)
CTATTACAATGTCATTAGTTGTGAACAAAGCACCTGGTCGCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAG < SRR4302535.1286567/94‑1 (MQ=60)
CTATTACAATGTCATTAGTTGTGAACAAAGCACCTGGTCGCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAG > SRR4302535.4184404/1‑94 (MQ=60)
CTATTACAATGTCATTAGTTGTGAACAAAGCACCTGGTCGCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAG < SRR4302535.4273302/94‑1 (MQ=60)
TTACAATGTCATTAGTTGTGAACAAAGCACCTGGTCGCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCG < SRR4302535.2578481/94‑1 (MQ=60)
TTACAATGTCATTAGTTGTGAACAAAGCACCTGGTCGCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCG < SRR4302535.4607662/94‑1 (MQ=60)
TTACAATGTCATTAGTTGTGAACAAAGCACCTGGTCGCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCG < SRR4302535.3101651/94‑1 (MQ=60)
ACAATGTCATTAGTTGTGAACAAAGCACCTGGTCGCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAA > SRR4302535.1132386/1‑94 (MQ=60)
ACAATGTCATTAGTTGTGAACAAAGCACCTGGTCGCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAA > SRR4302535.2256668/1‑94 (MQ=60)
ACAATGTCATTAGTTGTGAACAAAGCACCTGGTCGCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAA < SRR4302535.117805/94‑1 (MQ=60)
CAATGTCATTAGTTGTGAACAAAGCACCTGGTCGCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAA > SRR4302535.556401/1‑94 (MQ=60)
AATGTCATTAGTTGTGAACAAAGCACCTGGTCGCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAAA > SRR4302535.609572/1‑94 (MQ=60)
AATGTCATTAGTTGTGAACAAAGCACCTGGTCGCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAAA > SRR4302535.2636897/1‑94 (MQ=60)
ATGTCATTAGTTGTGAACAAAGCACCTGGTCGCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAAAA > SRR4302535.590087/1‑94 (MQ=60)
TGTCATTAGTTGTGAACAAAGCACCTGGTCGCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAAAAA > SRR4302535.4505840/1‑94 (MQ=60)
CATTAGTTGTGAACAAAGCACCTGGTCGCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACG < SRR4302535.1413735/94‑1 (MQ=60)
TTAGTTGTGAACAAAGCACCTGGTCGCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAA > SRR4302535.3717428/1‑94 (MQ=60)
TAGTTGTGAACAAAGCACCTGGTCGCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAA > SRR4302535.937725/1‑94 (MQ=60)
TAGTTGTGAACAAAGCACCTGGTCGCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAA < SRR4302535.1485744/94‑1 (MQ=60)
AGTTGTGAACAAAGCACCTGGTCGCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAAT > SRR4302535.259301/1‑94 (MQ=60)
GTTGTGAACAAAGCACCTGGTCGCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATC < SRR4302535.1469428/94‑1 (MQ=60)
TGTGAACAAAGCACCTGGTCGCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAA > SRR4302535.4009950/1‑94 (MQ=60)
GTGAACAAAGCACCTGGTCGCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAA > SRR4302535.1895230/1‑94 (MQ=60)
TGAACAAAGCACCTGGTCGCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAAC > SRR4302535.3329523/1‑94 (MQ=60)
TGAACAAAGCACCTGGTCGCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAAC < SRR4302535.1610164/94‑1 (MQ=60)
TGAACAAAGCACCTGGTCGCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAAC < SRR4302535.3776014/94‑1 (MQ=60)
TGAACAAAGCACCTGGTCGCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAAC > SRR4302535.89961/1‑94 (MQ=60)
TGAACAAAGCACCTGGTCGCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAAC < SRR4302535.1493554/94‑1 (MQ=60)
CAAAGCACCTGGTCGCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCT > SRR4302535.1650582/1‑94 (MQ=60)
AAAGCACCTGGTCGCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTC < SRR4302535.1352882/94‑1 (MQ=60)
AAGCACCTGGTCGCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTCA > SRR4302535.1314280/1‑94 (MQ=60)
AGCACCTGGTCGCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTCAG > SRR4302535.2240360/1‑94 (MQ=60)
AGCACCTGGTCGCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTCAG < SRR4302535.2065587/94‑1 (MQ=60)
CACCTGGTCGCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTCAGCG > SRR4302535.3470778/1‑94 (MQ=60)
CACCTGGTCGCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTCAGCG < SRR4302535.3659607/94‑1 (MQ=60)
CACCTGGTCGCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTCAGCG > SRR4302535.941477/1‑94 (MQ=60)
CACCTGGTCGCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTCAGCG < SRR4302535.2786115/94‑1 (MQ=60)
ACCTGGTCGCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTCAGCGA > SRR4302535.2708272/1‑94 (MQ=60)
ACCTGGTCGCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTCAGCGA > SRR4302535.2659004/1‑94 (MQ=60)
ACCTGGTCGCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTCAGCGA > SRR4302535.3983935/1‑94 (MQ=60)
CCTGGTCGCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTCAGCGAT > SRR4302535.2773141/1‑94 (MQ=60)
CTGGTCGCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTCAGCGATC > SRR4302535.4452801/1‑94 (MQ=60)
GTCGCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTCAGCGATCGCC > SRR4302535.2413399/1‑94 (MQ=60)
CATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTCAGCGATCGCCTGGACG > SRR4302535.870417/1‑94 (MQ=60)
CTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTCAGCGATCGCCTGGACGCCAT < SRR4302535.2364646/94‑1 (MQ=60)
CTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTCAGCGATCGCCTGGACGCCAT > SRR4302535.1015529/1‑94 (MQ=60)
CTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTCAGCGATCGCCTGGACGCCAT > SRR4302535.625774/1‑94 (MQ=60)
CTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTCAGCGATCGCCTGGACGCCAT < SRR4302535.592711/94‑1 (MQ=60)
TAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTCAGCGATCGCCTGGACGCCATC > SRR4302535.4533776/1‑94 (MQ=60)
AGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTCAGCGATCGCCTGGACGCCATCC < SRR4302535.3919586/94‑1 (MQ=60)
GGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTCAGCGATCGCCTGGACGCCATCCGCC > SRR4302535.3551244/1‑94 (MQ=60)
GCTATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTCAGCGATCGCCTGGACGCCATCCGCCA > SRR4302535.1601410/1‑94 (MQ=60)
CTATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTCAGCGATCGCCTGGACGCCATCCGCCAC > SRR4302535.2054280/1‑94 (MQ=60)
CTATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTCAGCGATCGCCTGGACGCCATCCGCCAC > SRR4302535.3929408/1‑94 (MQ=60)
CTATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTCAGCGATCGCCTGGACGCCATCCGCCAC > SRR4302535.387613/1‑94 (MQ=60)
ATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTCAGCGATCGCCTGGACGCCATCCGCCACCA > SRR4302535.1132164/1‑94 (MQ=60)
ATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTCAGCGATCGCCTGGACGCCATCCGCCACCA > SRR4302535.2427262/1‑94 (MQ=60)
TAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTCAGCGATCGCCTGGACGCCATCCGCCACCAG < SRR4302535.2864864/94‑1 (MQ=60)
AAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTCAGCGATCGCCTGGACGCCATCCGCCACCAGC > SRR4302535.4034278/1‑94 (MQ=60)
ATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTCAGCGATCGCCTGGACGCCATCCGCCACCAGCAG < SRR4302535.4362068/94‑1 (MQ=60)
TTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTCAGCGATCGCCTGGACGCCATCCGCCACCAGCAGG < SRR4302535.2065986/94‑1 (MQ=60)
TTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTCAGCGATCGCCTGGACGCCATCCGCCACCAGCAGGC > SRR4302535.4055445/1‑94 (MQ=60)
TATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTCAGCGATCGCCTGGACGCCATCCGCCACCAGCAGGCC > SRR4302535.2519324/1‑94 (MQ=60)
TATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTCAGCGATCGCCTGGACGCCATCCGCCACCAGCAGGCC > SRR4302535.607170/1‑94 (MQ=60)
ATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTCAGCGATCGCCTGGACGCCATCCGCCACCAGCAGGCCG < SRR4302535.593072/94‑1 (MQ=60)
TCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTCAGCGATCGCCTGGACGCCATCCGCCACCAGCAGGCCGA > SRR4302535.2777532/1‑94 (MQ=60)
CTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTCAGCGATCGCCTGGACGCCATCCGCCACCAGCAGGCCGAT > SRR4302535.3687499/1‑94 (MQ=60)
TTTATCAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTCAGCGATCGCCTGGACGCCATCCGCCACCAGCAGGCCGATC < SRR4302535.2078169/94‑1 (MQ=60)
TTATCAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTCAGCGATCGCCTGGACGCCATCCGCCACCAGCAGGCCGATCT < SRR4302535.1404215/94‑1 (MQ=60)
TATCAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTCAGCGATCGCCTGGACGCCATCCGCCACCAGCAGGCCGATCTT > SRR4302535.1840262/1‑94 (MQ=60)
ATCAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTCAGCGATCGCCTGGACGCCATCCGCCACCAGCAGGCCGATCTTT > SRR4302535.1617968/1‑94 (MQ=60)
TCAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTCAGCGATCGCCTGGACGCCATCCGCCACCAGCAGGCCGATCTTTC < SRR4302535.3722745/94‑1 (MQ=60)
CAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTCAGCGATCGCCTGGACGCCATCCGCCACCAGCAGGCCGATCTTTCG < SRR4302535.3695673/94‑1 (MQ=60)
CAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTCAGCGATCGCCTGGACGCCATCCGCCACCAGCAGGCCGATCTTTCC > SRR4302535.2442903/1‑94 (MQ=60)
CAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTCAGCGATCGCCTGGACGCCATCCGCCACCAGCAGGCCGATCTTTCA < SRR4302535.3637654/94‑1 (MQ=60)
AGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTCAGCGATCGCCTGGACGCCATCCGCCACCAGCAGGCCGATCTTTCGC > SRR4302535.3849335/1‑94 (MQ=60)
AGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTCAGCGATCGCCTGGACGCCATCCGCCACCAGCAGGCCGATCTTTCGC > SRR4302535.3682504/1‑94 (MQ=60)
AGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTCAGCGATCGCCTGGACGCCATCCGCCACCAGCAGGCCGATCTTTCGC > SRR4302535.500835/1‑94 (MQ=60)
GCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTCAGCGATCGCCTGGACGCCATCCGCCACCAGCAGGCCGATCTTTCGCTGGT < SRR4302535.2629502/94‑1 (MQ=60)
CATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTCAGCGATCGCCTGGACGCCATCCGCCACCAGCAGGCCGATCTTTCGCTGGTTG > SRR4302535.1609844/1‑94 (MQ=60)
CATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTCAGCGATCGCCTGGACGCCATCCGCCACCAGCAGGCCGATCTTTCGCTGGTTG > SRR4302535.4676285/1‑94 (MQ=60)
CATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTCAGCGATCGCCTGGACGCCATCCGCCACCAGCAGGCCGATCTTTCGCTGGTTG > SRR4302535.4367279/1‑94 (MQ=60)
CATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTCAGCGATCGCCTGGACGCCATCCGCCACCAGCAGGCCGATCTTTCGCTGGTTG > SRR4302535.1061344/1‑94 (MQ=60)
CATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTCAGCGATCGCCTGGACGCCATCCGCCACCAGCAGGCCGATCTTTCGCTGGTTG > SRR4302535.105020/1‑94 (MQ=60)
CATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTCAGCGATCGCCTGGACGCCATCCGCCACCAGCAGGCCGATCTTTCGCTGGTTG > SRR4302535.3589785/1‑94 (MQ=60)
TCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTCAGCGATCGCCTGGACGCCATCCGCCACCAGCAGGCCGATCTTTCGCTGGTTGAA > SRR4302535.407729/1‑94 (MQ=60)
TCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTCAGCGATCGCCTGGACGCCATCCGCCACCAGCAGGCCGATCTTTCGCTGGTTGAA < SRR4302535.367027/94‑1 (MQ=60)
TCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTCAGCGATCGCCTGGACGCCATCCGCCACCAGCAGGCCGATCTTTCGCTGGTTGAA > SRR4302535.3729812/1‑94 (MQ=60)
CGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTCAGCGATCGCCTGGACGCCATCCGCCACCAGCAGGCCGATCTTTCGCTGGTTGAAC > SRR4302535.3106401/1‑94 (MQ=60)
GCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTCAGCGATCGCCTGGACGCCATCCGCCACCAGCAGGCCGATCTTTCGCTGGTTGAAGC > SRR4302535.2370948/1‑94 (MQ=60)
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TTACAGAACTATTACAATGTCATTAGTTGTGAACAAAGCACCTGGTCGCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCACATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTCAGCGATCGCCTGGACGCCATCCGCCACCAGCAGGCCGATCTTTCGCTGGTTGAAGC > NC_000913/3774200‑3774383
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| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 18 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
