Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A1 F1 I1 R1 1696 279.3 15874187 97.8% 15524954 93.0

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 3,787,263 C→G G149A (GGC→GCC)  yibD ← putative regulator

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009133,787,2630CG99.5% 1342.7 / ‑3.4 432G149A (GGC→GCC) yibDputative regulator
Reads supporting (aligned to +/- strand):  ref base C (2/0);  new base G (228/200);  total (232/200)
Fisher's exact test for biased strand distribution p-value = 5.01e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.99e-01

Only 100 of 450 total aligned reads displayed.

TTTTTAACAATAACATCACGGCGATAAACCCCCATCCAGACAACGTGAGTCCAACGGCGCGAAGAAAGCCCCATCCGCAGCCAGTCCGGGCCGGTTAATACGCCGGTTGAGCGAAGGCGATCGGTGGGGATGGATTGCCAGGTTTCTCCCGTTTCACGAAAACACCAGTCAGCGTTGCAC  >  NC_000913/3787173‑3787352
                                                                                          |                                                                                         
tttttAACAATAACATCACGGCGATAAACCCCCATCCAGACAACGTGAGTCCAACGGCGCGAAGAAAGCCCCATCCGCAGCCAGTCCGGGGCg                                                                                         >  2:2393403/1‑93 (MQ=255)
tttttAACAATAACATCACGGCGATAAACCCCCATCCAGACAACGTGAGTCCAACGGCGCGAAGAAAGCCCCATCCGCAGCCAGTCCGGGGCg                                                                                         >  2:1421955/1‑93 (MQ=255)
 ttttAACAATAACATCACGGCGATAAACCCCCATCCAGACAACGTGAGTCCAACGGCGCGAAGAAAGCCCCATCCGCAGCCAGTCCGGGGCgg                                                                                        <  2:602905/93‑1 (MQ=255)
 ttttAACAATAACATCACGGCGATAAACCCCCATCCAGACAACGTGAGTCCAACGGCGCGAAGAAAGCCCCATCCGCAGCCAGTCCGGGGCgg                                                                                        >  2:3063356/1‑93 (MQ=255)
   ttAACAATAACATCACGGCGATAAACCCCCATCCAGACAACGTGAGTCCAACGGCGCGAAGAAAGCCCCATCCGCAGCCAGTCCGGGGCGGtt                                                                                      >  2:7307044/1‑93 (MQ=255)
       cAATAACATCACGGCGATAAACCCCCATCCAGACAACGTGAGTCCAACGGCGCGAAGAAAGCCCCATCCGCAGCCAGTCCGGGGCGGTTAATa                                                                                  >  2:2088752/1‑93 (MQ=255)
       cAATAACATCACGGCGATAAACCCCCATCCAGACAACGTGAGTCCAACGGCGCGAAGAAAGCCCCATCCGCAGCCAGTCCGGGGCGGTTAATa                                                                                  >  2:4161720/1‑93 (MQ=255)
        aaTAACATCACGGCGATAAACCCCCATCCAGACAACGTGAGTCCAACGGCGCGAAGAAAGCCCCATCCGCAGCCAGTCCGGGGCGGTTAATAc                                                                                 >  1:466402/1‑93 (MQ=255)
         aTAACATCATGGCGATAAACCCCCATCCAGACAACGTGAGTCCAACGGCGCGAAGAAAGCCCCATCCGCAGCCAGTCCGGGGCGGTTAATACg                                                                                >  2:1335559/1‑93 (MQ=255)
         aTAACATCACGGCGATAAACCCCCATCCAGACAACGTGAGTCCAACGGCGCGAAGAAAGCCCCATCCGCAGCCAGTCCGGGGCGGTTAATACg                                                                                >  1:5586026/1‑93 (MQ=255)
         aTAACATCACGGCGATAAACCCCCATCCAGACAACGTGAGTCCAACGGCGCGAAGAAAGCCCCATCCGCAGCCAGTCCGGGGCGGTTAATACg                                                                                <  1:3543468/93‑1 (MQ=255)
         aTAACATCACGGCGATAAACCCCCATCCAGACAACGTGAGTCCAACGGCGCGAAGAAAGCCCCATCCGCAGCCAGTCCGGGGCGGTTAATACg                                                                                >  2:701603/1‑93 (MQ=255)
          tAACATCACGGCGATAAACCCCCATCCAGACAACGTGAGTCCAACGGCGCGAAGAAAGCCCCATCCGCAGCCAGTCCGGGGCGGTTAATACGc                                                                               <  1:190761/93‑1 (MQ=255)
           aaCATCACGGCGATAAACCGCCATCCAGACAACGGGAGTCCAACGGCGCGAAGAAATCCCCATCCGCAGCCAGTCCCGGGTGGTTAATACGcc                                                                              >  2:4722161/1‑93 (MQ=255)
           aaCATCACGGCGATAAACCCCCATCCAGACAACGTGAGTCCAACGGCGCGAAGAAAGCCCCATCCGCAGCCAGTCCGGGGCGGTTAATACGcc                                                                              >  1:2597481/1‑93 (MQ=255)
           aaCATCACGGCGATAAACCCCCATCCAGACAACGTGAGTCCAACGGCGCGAAGAAAGCCCCATCCGCAGCCAGTCCGGGGCGGTTAATACGcc                                                                              >  1:5066348/1‑93 (MQ=255)
           aaCATCACGGCGATAAACCCCCATCCAGACAACGTGAGTCCAACGGCGCGAAGAAAGCCCCATCCGCAGCCAGTCCGGGGCGGTTAATACGcc                                                                              >  1:5162363/1‑93 (MQ=255)
             cATCACGGCGATAAACCCCCATCCAGACAACGTGAGTCCAACGGCGCGAAGAAAGCCCCATCCGCAGCCAGTCCGGGGCGGTTAATACGCCgg                                                                            >  2:7830136/1‑93 (MQ=255)
              aTCACGGCGATAAACCCCCATCCAGACAACGTGAGTCCAACGGCGCGAAGAAAGCCCCATCCGCAGCCAGTCCGGGGCGGTTAATACGCCGGt                                                                           <  2:2703648/93‑1 (MQ=255)
              aTCACGGCGATAAACCCCCATCCAGACAACGTGAGTCCAACGGCGCGAAGAAAGCCCCATCCGCAGCCAGTCCGGGGCGGTTAATACGCCGGt                                                                           <  1:3008314/93‑1 (MQ=255)
              aTCACGGCGATAAACCCCCATCCAGACAACGTGAGTCCAACGGCGCGAAGAAAGCCCCATCCGCAGCCAGTCCGGGGCGGTTAATACGCCGGt                                                                           <  1:6508475/93‑1 (MQ=255)
              aTCACGGCGATAAACCCCCATCCAGACAACGTGAGTCCAACGGCGCGAAGAAAGCCCCATCCGCAGCCAGTCCGGGGCGGTTAATACGCCGGt                                                                           >  2:5405543/1‑93 (MQ=255)
               tCACGGCGATAAACCCCCATCCAGACAACGTGAGTCCAACGGCGCGAAGAAAGCCCCATCCGCAGCCAGTCCGGGGCGGTTAATACGCCGGtt                                                                          <  1:4328119/93‑1 (MQ=255)
                 aCGGCGATAAACCCCCATCCAGACAACGTGAGTCCAACGGCGCGAAGAAAGCCCCATCCGCAGCCAGTCCAGGGCGGTTAATACGCCGGTTGa                                                                        <  2:4982200/93‑1 (MQ=255)
                  cGGCGATAAACCCCCATCCAGACAACGTGAGTCCAACGGCGCGAAGAAAGCCCCATCCGCAGCCAGTCCGGGGCGGTTAATACGCCGGTTGAg                                                                       >  1:7385939/1‑93 (MQ=255)
                  cGGCGATAAACCCCCATCCAGACAACGTGAGTCCAACGGCGCGAAGAAAGCCCCATCCGCAGCCAGTCCGGGGCGGTTAATACGCCGGTTGAg                                                                       >  1:5461192/1‑93 (MQ=255)
                   ggCGATAAACCCCCATCCAGACAACGTGAGTCCAACGGCGCGAAGAAAGCCCCATCCGCAGCCAGTCCGGGGCGGTTAATACGCCGGTTGAGc                                                                      >  1:6229719/1‑93 (MQ=255)
                    gCGATAAACCCCCATCCAGACAACGTGAGTCCAACGGCGCGAAGAAAGCCCCATCCGCAGCCAGTCCGGGGCGGTTAATACGCCGGTTGAGCg                                                                     >  2:7682138/1‑93 (MQ=255)
                     ggaaaaaCCCCCATCCAGACAACGTGAGTCCAACGGCGCGAAGAAAGCCCCATCCGCAGCCAGTCCGGGGCGGTTAATACGCCGGTTGAGCGa                                                                    <  1:4399488/89‑1 (MQ=255)
                       aTAAACCCCCATCCAGACAACGTGAGTCCAACGGCGCGAAGAAAGCCCCATCCGCAGCCAGTCCGGGGCGGTTAATACGCCGGTTGAGCGAAg                                                                  >  2:3550656/1‑93 (MQ=255)
                        tAAACCCCCATCCAGACAACGTGAGTCCAACGGCGCGAAGAAAGCCCCATCCGCAGCCAGTCCGGGGCGGTTAATACGCCGGTTGAGCGAAgg                                                                 >  2:1240672/1‑93 (MQ=255)
                          aaCCCCCATCCAGACAACGTGAGTCCAACGGCGCGAAGAAAGCCCCATCCGCAGCCAGTCCGGGGCGGTTAATACGCCGGTTGAGCGAAGGCg                                                               >  1:1163363/1‑93 (MQ=255)
                           aCCCCCATCCAGACAACGTGAGTCCAACGGCGCGAAGAAAGCCCCATCCGCAGCCAGTCCGGGGCGGTTAATACGCCGGTTGAGCGAAGGCGa                                                              <  1:4531450/93‑1 (MQ=255)
                            cccccATCCAGACAACGTGAGTCCAACGGCGCGAAGAAAGCCCCATCCGCAGCCAGTCCGGGGCGGTTAATACGCCGGTTGAGCGAAGGCGac                                                             >  1:7293232/1‑92 (MQ=255)
                            cccccATCCAGACAACGTGAGTCCAACGGCGCGAAGAAAGCCCCATCCGCAGCCAGTCCGGGGCGGTTAATACGCCGGTTGAGCGAAGGCGAt                                                             <  2:6785332/93‑1 (MQ=255)
                            cccccATCCAGACAACGTGAGTCCAACGGCGCGAAGAAAGCCCCATCCGCAGCCAGTCCGGGGCGGTTAATACGCCGGTTGAGCGAAGGCGAt                                                             <  1:4883847/93‑1 (MQ=255)
                             ccccATCCAGACAACGTGAGTCCAACGGCGCGAAGAAAGCCCCATCCGCAGCCAGTCCGGGGCGGTTAATACGCCGGTTGAGCGAAGGCGATc                                                            >  2:1140180/1‑93 (MQ=255)
                              cccATCCAGACAACGTGAGTCCAACGGCGCGAAGAAAGCCCCATCCGCAGCCAGTCCGGGGCGGTTAATACGCCGGTTGAGCGAAGGCGATCg                                                           <  1:3172245/93‑1 (MQ=255)
                              cccATCCAGACAACGTGAGTCCAACGGCGCGAAGAAAGCCCCATCCGCAGCCAGTCCGGGGCGGTTAATACGCCGGTTGAGCGAAGGCGATCg                                                           >  2:2929259/1‑93 (MQ=255)
                              cccATCCAGACAACGTGAGTCCAACGGCGCGAAGAAAGCCCCATCCGCAGCCAGTCCGGGGCGGTTAATACGCCGGTTGAGCGAAGGCGATCg                                                           >  1:3840707/1‑93 (MQ=255)
                              cccATCCAGACAACGTGAGTCCAAAGGCGCGAAGAAAGCCCCATCCGCAGCCAGTCCGGGGCGGTTAATACGCCGGTTGAGCGAAGGCGATCg                                                           >  2:7586340/1‑93 (MQ=255)
                               ccATCCAGACAACGTGAGTCCAACGGCGCGAAGAAAGCCCCATCCGCAGCCAGTCCGGGGCGGTTAATACGCCGGTTGAGCGAAGGCGATCgg                                                          <  1:1261654/93‑1 (MQ=255)
                                cATCCAGACAACGTGAGTCCAACGGCGCGAAGAAAGCCCCATCCGCAGCCAGTCCGGGGCGGTTAATACGCCGGTTGAGCGAAGGCGATCGGt                                                         >  1:5789364/1‑93 (MQ=255)
                                cATCCAGACAACGTGAGTCCAACGGCGCGAAGAAAGCCCCATCCGCAGCCAGTCCGGGGCGGTTAATACGCCGGTTGAGCGAAGGCGATCGGt                                                         <  2:897307/93‑1 (MQ=255)
                                cATCCAGACAACGTGAGTCCAACGGCGCGAAGAAAGCCCCATCCGCAGCCAGTCCGGGGCGGTTAATACGCCGGTTGAGCGAAGGCGATCGGt                                                         <  1:1667884/93‑1 (MQ=255)
                                cATCCAGACAACGTGAGTCCAACGGCGCGAAGAAAGCCCCATCCGCAGCCAGTCCGGGGCGGTTAATACGCCGGTTGAGCGAAGGCGATCGGt                                                         <  1:7171541/93‑1 (MQ=255)
                                 aTCCAGACAGCGTGAGTCCAACGGCGCGAAGAAAGCCCCATCCGCAGCCAGTCCGGGGCGGTTAATACGCCGGTTGAGCGAAGGCGATCGGTg                                                        <  2:4752008/93‑1 (MQ=255)
                                 aTCCAGACAACGTGAGTCCAACGGCGCGAAGAAAGCCCCATCCGCAGCCAGTCCGGGGCGGTTAATACGCCGGTTGAGCGAAGGCGATCGGTg                                                        <  2:4427246/93‑1 (MQ=255)
                                  tCCAGACAACGTGAGTCCAACGGCGCGAAGAAAGCCCCATCCGCAGCCAGTCCGGGGCGGTTAATACGCCGGTTGAGCGAAGGCGATCGGTgg                                                       >  2:1010826/1‑93 (MQ=255)
                                  tCCAGACAACGTGAGTCCAACGGCGCGAAGAAAGCCCCATCCGCAGCCAGTCCGGGGCGGTTAATACGCCGGTTGAGCGAAGGCGATCGGTgg                                                       >  2:5138368/1‑93 (MQ=255)
                                     aGACAACGTGAGTCCAACGGCGCGAAGAAAGCCCCATCCGCAGCCAGTCCGGGGCGGTTAATACGCCGGTTGAGCGAAGGCGATCGGTGGgga                                                    <  2:2619782/93‑1 (MQ=255)
                                      gACAACGTGAGTCCAACGGCGCGAAGAAAGCCCCATCCGCAGCCAGTCCGGGGCGGTTAATACGCCGGTTGAGCGAAGGCGATCGGTGGggat                                                   <  2:5667095/93‑1 (MQ=255)
                                      gACAACGTGAGTCCAACGGCGCGAAGAAAGCCCCATCCGCAGCCAGTCCGGGGCGGTTAATACGCCGGTTGAGCGAAGGCGATCGGTGGggat                                                   >  2:6883181/1‑93 (MQ=255)
                                         aaCGTGAGTCCAACGGCGCGAAGAAAGCCCCATCCGCAGCCAGTCCGGGGCGGTTAATACGCCGGTTGAGCGAAGGCGATCGGTGGggatgga                                                <  1:2185319/93‑1 (MQ=255)
                                           cGTGAGTCCAACGGCGCGAAGAAAGCCCCATCCGCAGCCAGTCCGGGGCGGTTAATACGCCGGTTGAGCGAAGGCGATCGGTGGGGATGGAtt                                              >  1:6837176/1‑93 (MQ=255)
                                             tGAGTCCAACGGCGCGAACAAAGCCCCATCCGCAGCCAGTCCGGGGCGGTTAATACGCCGGTTGAGCGAAGGCGCGCGGTGGGGATGGATTGc                                            >  2:65961/1‑93 (MQ=255)
                                              gAGTCCAACGGCGCGAAGAAAGCCCCATCCGCAGCCAGTCCGGGGCGGTTAATACGCCGGTTGAGCGAAGGCGATCGGTGGGGATGGATTGcc                                           <  2:4033700/93‑1 (MQ=255)
                                               aGTCCAACGGCGCGAAGAAAGCCCCATCCGCAGCCAGTCCGGGGCGGTTAATACGCCGGTTGAGCGAAGGCGATCGGTGGGGATGGATTGCCa                                          >  1:406730/1‑93 (MQ=255)
                                                gTCCAACGGCGCGAAGAAAGCCCCATCCGCAGCCAGTCCGGGGCGGTTAATACGCCGGTTGAGCGAAGGCGATCGGTGGGGATGGATTGCCAg                                         >  1:2857619/1‑93 (MQ=255)
                                                 tCCAACGGCGCGAAGAAAGCCCCATCCGCAGCCAGTCCGGGGCGGTTAATACGCCGGTTGAGCGAAGGCGATCGGTGGGGATGGATTGCCAgg                                        >  2:6486624/1‑93 (MQ=255)
                                                  ccAACGGCGCGAAGAAAGCCCCATCCGCAGCCAGTCCGGGGCGGTTAATACGCCGGTTGAGCGAAGGCGATCGGTGGGGATGGATTGCCAGGt                                       >  2:5780643/1‑93 (MQ=255)
                                                  ccAACGGCGAGAAGAAAGCCCCATCCGCAGCCAGTCCGGGGCGGTTAATACGCCGGTTGAGCGAAGGCGATCGGTGGGGATGGATTGCCAGGt                                       <  2:1918127/93‑1 (MQ=255)
                                                   cAACGGCGCGAAGAAAGCCCCATCCGCAGCCAGTCCGGGGCGGTTAATACGCCGGTTGAGCGAAGGCGATCGGTGGGGATGGATTGCCAGGtt                                      >  2:3367605/1‑93 (MQ=255)
                                                   cAACGGCGCGAAGAAAGCCCCATCCGCAGCCAGTCCGGGGCGGTTAATACGCCGGTTGAGCGAAGGCGATCGGTGGGGATGGATTGCCAGGtt                                      <  2:3499146/93‑1 (MQ=255)
                                                    aaCGGCGCGAAGAAAGCCCCATCCGCAGCCAGTCCGGGGCGGTTAATACGCCGGTTGAGCGAAGGCGATCGGTGGGGATGGATTGCCAGGttt                                     >  2:1955543/1‑93 (MQ=255)
                                                     aCGGCGCGAAGAAAGCCCCATCCGCAGCCAGTCCGGGGCGGTTAATACGCCGGTTGAGCGAAGGCGATCGGTGGGGATGGATTGCCAGGTTtc                                    <  1:1302738/93‑1 (MQ=255)
                                                       ggCGCGAAGAAAGCCCCATCCGCAGCCAGTCCGGGGCGGTTAATACGCCGGTTGAGCGAAGGCGATCGGTGGGGATGGATTGCCAGGTTtctc                                  <  1:7668782/93‑1 (MQ=255)
                                                           cgAAGAAAGCCCCATCCGCAGCCAGTCCGGGGCGGTTAATACGCCGGTTGAGCGAAGGCGATCGGTGGGGATGGATTGCCAGGTTTCTCCCGt                              <  2:7459980/93‑1 (MQ=255)
                                                            gaagaaAGCCCCATCCGCAGCCAGTCCGGGGCGGTTAATACGCCGGTTGAGCGAAGGCGATCGGTGGGGATGGATTGCCAGGTTTCTCCCGtt                             >  1:6571955/1‑93 (MQ=255)
                                                             aagaaAGCCCCATCCGCAGCCAGTCCGGGGCGGTTAATACGCCGGTTGAGCGAAGGCGATCGGTGGGGATGGATTGCCAGGTTTCTCCCGttt                            <  1:5992487/93‑1 (MQ=255)
                                                              agaaAGCCCCATCCGCAGCCAGTCCGGGGCGGTTAATACGCCGGTTGAGCGAAGGCGATCGGTGGGGATGGATTGCCAGGTTTCTCCCGTTTc                           >  1:3320134/1‑93 (MQ=255)
                                                               gaaAGCCCCATCCGCAGCCAGTCCGGGGCGGTTAATACGCCGGTTGAGCGAAGGCGATCGGTGGGGATGGATTGCCCGGTTTCTCCCGTTTCa                          >  2:2216978/1‑93 (MQ=255)
                                                               gaaAGCCCCATCCGCAGCCAGTCCGGGGCGGTTAATACGCCGGTTGAGCGAAGGCGATCGGTGGGGATGGATTGCCAGGTTTCTCCCGTTTCa                          >  1:1042729/1‑93 (MQ=255)
                                                               aaaaGCCCCATCCGCAGCCAGTCCGGGGCGGTTAATACGCCGGTTGAGCGAAGGCGATCGGTGGGGATGGATTGCCAGGTTTCTCCCGTTTCa                          <  1:6198424/92‑1 (MQ=255)
                                                                aaaGCCCCATCCGCAGCCAGTCCGGGGCGGTTAATACGCCGGTTGAGCGAAGGCGATCGGTGGGGATGGATTGCCAGGTTTCTCCCGTTTCAc                         >  2:2547538/1‑93 (MQ=255)
                                                                  aGCCCCATCCGCAGCCAGTCCGGGGCGGTTAATACGCCGGTTGAGCGAAGGCGATCGGTGGGGATGGATTGCCAGGTTTCTCCCGTTTCACGa                       >  1:7747670/1‑93 (MQ=255)
                                                                   gCCCCATCCGCAGCCAGTCCGGGGCGGTTAATACGCCGGTTGAGCGAAGGCGATCGGTGGGGATGGATTGCCAGGTTTCTCCCGTTTCACGaa                      >  1:2681873/1‑93 (MQ=255)
                                                                    ccccATCCGCAGCCAGTCCGGGGCGGTTAATACGCCGGTTGAGCGAAGGCGATCGGTGGGGATGGATTGCCAGGTTTCTCCCGTTTCACGaaa                     >  1:1836619/1‑93 (MQ=255)
                                                                    ccccATCCGCAGCCAGTCCGGGGCGGTTAATACGCCGGTTGAGCGAAGGCGATCGGTGGGGATGGATTGCCAGGTTTCTCCCGTTTCACGaaa                     >  2:3667629/1‑93 (MQ=255)
                                                                       cATCCGCAGCCAGTCCGGGGCGGTTAATACGCCGGTTGAGCGAAGGCGATCGGTGGGGATGGATTGCCAGGTTTCTCCCGTTTCACGCAAaca                  >  2:5709575/1‑93 (MQ=255)
                                                                        aTCCGCAGCCAGTCCGGGGCGGTTAATACGCCGGTTGAGCGAAGGCGATCGGTGGGGATGGATTGCCAGGTTTCTCCCGTTTCACGAAAacac                 >  1:153967/1‑93 (MQ=255)
                                                                         tCCGCAGCCAGTCCGGGGCGGTTAATACGCCGGTTGAGCGAAGGCGATCGGTGGGGATGGATTGCCAGGTTTCTCCCGTTTCACGAAAACAcc                >  1:6141297/1‑93 (MQ=255)
                                                                         tCCGCAGCCAGTCCGGGGCGGTTAATACGCCGGTTGAGCGAAGGCGATCGGTGGGGATGGATTGCCAGGTTTCTCCCGTTTCACGAAAACAcc                >  2:1665274/1‑93 (MQ=255)
                                                                         tCCGCAGCCAGTCCGGGGCGGTTAATACGCCGGTTGAGCGAAGGCGATCGGTGGGGATGGATTGCCAGGTTTCTCCCGTTTCACGAAAACAcc                >  2:321517/1‑93 (MQ=255)
                                                                          ccGCAGCCAGTCCGGGGCGGTTAATACGCCGGTTGAGCGAAGGCGATCGGTGGGGATGGATTGCCAGGTTTCTCCCGTTTCACGAAAACACCa               <  1:7843735/93‑1 (MQ=255)
                                                                            gCAGCCAGTCCGGGGCGGTTAATACGCCGGTTGAGCGAAGGCGATCGGTGGGGATGGATTGCCAGGTTTCTCCCGTTTCACGAAAACACCAGt             <  2:6520974/93‑1 (MQ=255)
                                                                             cAGCCAGTCCGGGGCGGTTAATACGCCGGTTGAGCGAAGGCGATCGGTGGGGATGGATTGCCAGGTTTCTCCCGTTTCACGAAAACACCAGTc            <  1:69579/93‑1 (MQ=255)
                                                                             cAGCCAGTCCGGGGCGGTTAATACGCCGGTTGAGCGAAGGCGATCGGTGGGGATGGATTGCCAGGTTTCTCCCGTTTCACGAAAACACCAGTc            <  2:3878006/93‑1 (MQ=255)
                                                                               gCCAGTCCGGGGCGGTTAATACGCCGGTTGAGCGAAGGCGATCGGTGGGGATGGATTGCCAGGTTTCTCCCGTTTCACGAAAACACCAGTCAg          >  1:3618932/1‑93 (MQ=255)
                                                                               gCCAGTCCGGGGCGGTTAATACGCCGGTTGAGCGAAGGCGATCGGTGGGGATGGATTGCCAGGTTTCTCCCGTTTCACGAAAACACCAGTCAg          <  1:3389171/93‑1 (MQ=255)
                                                                               gCCAGTCCGGGGCGGTTAATACGCCGGTTGAGCGAAGGCGATCGGTGGGGATGGATTGCCAGGTTTCTCCCGTTTCACGAAAACACCAGTCAg          >  2:6147781/1‑93 (MQ=255)
                                                                               gCCAGTCCGGGGCGGTTAATACGCCGGTTGAGCGAAGGCGATCGGTGGGGATGGATTGCCAGGTTTCTCCCGTTTCACGAAAACACCAGTCAg          <  1:2340210/93‑1 (MQ=255)
                                                                                 cAGTCCGGGGCGTTTAATACGCCGGTTGAGCGAAGGCGATCGGTGGGGATGGATTGCCAGGTTTCTCCCGTTTCACGAAAACACCAGTCAGCg        <  2:4547578/93‑1 (MQ=255)
                                                                                  aGTCCGGGGCGGTTAATACGCCGGTTGAGCGAAGGCGATCGGTGGGGATGGATTGCCAGGTTTCTCCCGTTTCACGAAAACACCAGTCAGCGt       >  2:5260984/1‑93 (MQ=255)
                                                                                   gTCCGGGGCGGTTAATACGCCGGTTGAGCGAAGGCGATCGGTGGGGATGGATTGCCAGGTTTCTCCCGTTTCACGAAAACACCAGTCAGCGtt      <  1:5307427/93‑1 (MQ=255)
                                                                                   gTCCGGGGCGGTTAATACGCCGGTTGAGCGAAGGCGATCGGTGGGGATGGATTGCCAGGTTTCTCCCGTTTCACGAAAACACCAGTCAGCGtt      >  1:4161138/1‑93 (MQ=255)
                                                                                    tCCGGGGCGGTTAATACGCCGGTTGAGCGAAGGCGATCGGTGGGGATGGATTGCCAGGTTTCTCCCGTTTCACGAAAACACCAGTCAGCGTTg     <  2:3925723/93‑1 (MQ=255)
                                                                                      cGGGGCGGTTAATACGCCGGTTGAGCGAAGGCGATCGGTGGGGATGGATTGCCAGGTTTCTCCCGTTTCACGAAAACACCAGTCAGCGTTGCa   <  2:3829217/93‑1 (MQ=255)
                                                                                      cGGGGCGGTTAATACGCCGGTTGAGCGAAGGCGATCGGTGGGGATGGATTGCCAGGTTTCTCCCGTTTCACGAAAACACCAGTCAGCGTTGCa   <  2:4899563/93‑1 (MQ=255)
                                                                                       ggggCGGTTAATACGCCGGTTGAGCGAAGGCGATCGGTGGGGATGGATTGCCAGGTTTCTCCCGTTTCACGAAAACACCAGTCAGCGTTGCAc  <  1:5382672/93‑1 (MQ=255)
                                                                                          |                                                                                         
TTTTTAACAATAACATCACGGCGATAAACCCCCATCCAGACAACGTGAGTCCAACGGCGCGAAGAAAGCCCCATCCGCAGCCAGTCCGGGCCGGTTAATACGCCGGTTGAGCGAAGGCGATCGGTGGGGATGGATTGCCAGGTTTCTCCCGTTTCACGAAAACACCAGTCAGCGTTGCAC  >  NC_000913/3787173‑3787352

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 19 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

BRESEQ :: bam2aln output Only 200 of 228 total aligned reads displayed.
ATTTTTAACAATAACATCACGGCGATAAA‑CCCCCATCCAGACAACGTGAGTCCAACGGCGCGAAGAAAGCCCCATCCGCAGCCAGTCCGGGCCGGTTAATACGCCGGTTGAGCGAAGGCGATCGGTGGGGATGGATTGCCAGGTTTCTCCCGTTTCACGAAAACACCAGTCAGCGTTGCACTGCG  >  NC_000913/3787172‑3787356
                                                                                            |                                                                                             
ATTTTTAACAATAACATCACGGCGATAAA‑CCCCCATCCAGACAACGTGAGTCCAACGGCGCGAAGAAAGCCCCATCCGCAGCCAGTCCGGGGCG                                                                                             >  SRR4302543.6796218/1‑94 (MQ=60)
ATTTTTAACAATAACATCACGGCGATAAA‑CCCCCATCCAGACAACGTGAGTCCAACGGCGCGAAGAAAGCCCCATCCGCAGCCAGTCCGGGGCG                                                                                             >  SRR4302543.6827941/1‑94 (MQ=60)
 TTTTTAACAATAACATCACGGCGATAAA‑CCCCCATCCAGACAACGTGAGTCCAACGGCGCGAAGAAAGCCCCATCCGCAGACAGTCCGGGGCGG                                                                                            >  SRR4302543.495251/1‑94 (MQ=60)
 TTTTTAAAAATAACATCACGGCGATAAA‑CCCCCATCCAGACAACGTGAGTCCAACGGCGCGAAGAAAGCCCCATCCGCAGCCAGTCCGGGGCGG                                                                                            <  SRR4302543.4743905/94‑1 (MQ=60)
   TTTAACAATAACATCACGGCGATAAA‑CCCCCATCCAGACAACGTGAGTCCAACGGCGCGAAGAAAGCCCCATCCGCAGCCAGTCCGGGGCGGTT                                                                                          >  SRR4302543.7137727/1‑94 (MQ=60)
    TTAACAATAACATCACGGCGATAAA‑CCCCCATCCAGACAACGTGAGTCCAACGGCGCGAAGAAAGCCCCATCCGCAGCCAGTCCGGGGCGGTTA                                                                                         >  SRR4302543.1236150/1‑94 (MQ=60)
     TAACAATAACATCACGGCGATAAA‑CCCCCATCCAGACAACGTGAGTCCAACGGCGCGAAGAAAGCCCCATCCGCAGCCAGTCCGGGGCGGTTAA                                                                                        <  SRR4302543.6257538/94‑1 (MQ=60)
      AACAATAACATCACGGCGATAAA‑CCCCCATCCAGACAACGTGAGTCCAACGGCGCGAAGAAAGCCCCATCCGCAGCCAGTCCGGGGCGGTTAAT                                                                                       <  SRR4302543.5421299/94‑1 (MQ=60)
       ACAATAACATCACGGCGATAAA‑CCCCCATCCAGACAACGTGAGTCCAACGGCGCGAAGAAAGCCCCATCTGCAGTCAGTCCGGGGCGGTTAATA                                                                                      >  SRR4302543.7067751/1‑94 (MQ=60)
       ACAATAACATCACGGCGATAAA‑CCCCCATCCAGACAACGTGAGTCCAACGGCGCGAAGAAAGCCCCATCCGCAGCCAGTCCGGGGCGGTTAATA                                                                                      <  SRR4302543.900445/94‑1 (MQ=60)
        CAATAACATCACGGCGATAAA‑CCCCCATCCAGACAACGTGAGTCCAACGGCGCGAAGAAAGCCCCATCCGCAGCCAGTCCGGGGCGGTTAATAC                                                                                     >  SRR4302543.470741/1‑94 (MQ=60)
        CAATAACATCACGGCGATAAA‑CCCCCATCCAGACAACGTGAGTCCAACGGCGCGAAGAAAGCCCCATCCGCAGCCAGTCCGGGGCGGTTAATAC                                                                                     >  SRR4302543.62069/1‑94 (MQ=60)
        CAATAACATCACGGCGATAAA‑CCCCCATCCAGACAACGTGAGTCCAACGGCGCGAAGAAAGCCCCATCCGCAGCCAGTCCGGGGCGGTTAATAC                                                                                     >  SRR4302543.1657185/1‑94 (MQ=60)
        CAATAACATCACGGCGATAAA‑CCCCCATCCAGACAACGTGAGTCCAACGGCGCGAAGAAAGCCCCATCCGCAGCCAGTCCGGGGCGGTTAATAC                                                                                     <  SRR4302543.4166810/94‑1 (MQ=60)
        CAATAACATCACGGCGATAAA‑CCCCCATCCAGACAACGTGAGTCCAACGGCGCGAAGAAAGCCCCATCCGCAGCCAGTCCGGGGCGGTTAATAC                                                                                     >  SRR4302543.5140297/1‑94 (MQ=60)
        CAATAACATCACGGCGATAAA‑CCCCCATCCAGACAACGTGAGTCCAACGGCGCGAAGAAAGCCCCATCCGCAGCCAGTCCGGGGCGGTTAATAC                                                                                     <  SRR4302543.328779/94‑1 (MQ=60)
        CAATAACATCACGGCGATAAA‑CCCCCATCCAGACAACGTGAGTCCAACGGCGCGAAGAAAGCCCCATCCGCAGCCAGTCCGGGGCGGTTAATAC                                                                                     >  SRR4302543.1132604/1‑94 (MQ=60)
         AATAACATCACGGCGATAAA‑CCCCCATCCAGACAACGTGAGTCCAACGGCGCGAAGAAAGCCCCATCCGCAGCCAGTCCGGGGCGGTTAATACG                                                                                    <  SRR4302543.7252577/94‑1 (MQ=60)
         AATAACATCACGGCGATAAA‑CCCCCATCCAGACAACGTGAGTCCAACGGCGCGAAGAAAGCCCCATCCGCAGCCAGTCCGGGGCGGTTAATACG                                                                                    <  SRR4302543.6250914/94‑1 (MQ=60)
         AATAACATCACGGCGATAAA‑CCCCCATCCAGACAACGTGAGTCCAACGGCGCGAAGAAAGCCCCATCCGCAGCCAGTCCGGGGCGGTTAATACG                                                                                    >  SRR4302543.6269248/1‑94 (MQ=60)
           TAACATCACGGCGATAAA‑CCCCCATCCAGACAACGTGAGTCCAACGGCGCGAAGAAAGCCCCATCCGCAGCCAGTCCGGGGCGGTTCATACGCC                                                                                  >  SRR4302543.5478243/1‑94 (MQ=60)
           TAACATCACGGCGATAAA‑CCCCCATCCAGACAACGTGAGTCCAACGGCGCGAAGAAAGCCCCATCCGCAGCCAGTCCGGGGCGGTTAATACGCC                                                                                  >  SRR4302543.2621077/1‑94 (MQ=60)
           TAACATCACGGCGATAAA‑CCCCCATCCAGACAACGTGAGTCCAACGGCGCGAAGAAAGCCCCATCCGCAGCCAGTCCGGGGCGGTTAATACGCC                                                                                  >  SRR4302543.5209013/1‑94 (MQ=60)
           TAACATCACGGCGATAAA‑CCCCCATCCAGACAACGTGAGTCCAACGGCGCGAAGAAAGCCCCATCCGCAGCCAGTCCGGGGCGGTTAATACGCC                                                                                  >  SRR4302543.5112344/1‑94 (MQ=60)
           TAACATCACGGCGATAAA‑CCCCCATCCAGACAACGTGAGTCCAACGGCGCGAAGAAAGCCCCATCCGCAGCCAGTCCGGGGCGGTTAATACGCC                                                                                  <  SRR4302543.192375/94‑1 (MQ=60)
           TAACATCACGGCGATAAA‑CCCCCATCCAGACAACGTGAGTCCAACGGCGCGAAGAAAGCCCCATCCGCAGCCAGTCCGGGGCGGTTAATACGCC                                                                                  <  SRR4302543.929637/94‑1 (MQ=60)
            AACATCACGGCGATAAA‑CCCCCATCCAGACAACGTGAGTCCAACGGCGCGAAGAAAGCCCCATCCGCAGCCAGTCCGGGGCGGTTAATACGCCG                                                                                 >  SRR4302543.516088/1‑94 (MQ=60)
            AACATCACGGCGATAAA‑CCCCCATCCAGACAACGTGAGTCCAACGGCGCGAAGAAAGCCCCATCCGCAGCCAGTCCGGGGCGGTTAATACGCCG                                                                                 >  SRR4302543.3399439/1‑94 (MQ=60)
            AACATCACGGCGATAAA‑CCCCCATCCAGACAACGTGAGTCCAACGGCGCGAAGAAAGCCCCATCCGCAGCCAGTCCGGGGCGGTTAATACGCCG                                                                                 >  SRR4302543.5929887/1‑94 (MQ=60)
             ACATCACGGCGATAAA‑CCCCCATCCAGACAACGTGAGTCCAACGGCGCGAAGAAAGCCCCATCCGCAGCCAGTCCGGGGCGGTTAATACGCCGG                                                                                <  SRR4302543.7894965/94‑1 (MQ=60)
              CATCACGGCGATAAA‑CCCCCATCCAGACAACGTGAGTCCAACGGCGCGAAGAAAGCCCCATCCGCAGCCAGTCCGGGTCGGTTAATACGCCGGT                                                                               >  SRR4302543.2415901/1‑94 (MQ=60)
               ATCACGGCGATAAACCCCCCATCCAGACAACGTGAGTCCAACGGCGCGAAGAAAGCCCCATCCGCAGCCAGTCCGGGCCGGTTAATACGCCGGT                                                                               >  SRR4302543.5510628/1‑94 (MQ=60)
               ATCACGGCGATAAA‑CCCCCATCCAGACAACGTGAGTCCAACGGCGCGCAGAAAGCCCCATCCGCAGCCAGTCCGGGGCGGTGAATACGCCGGTT                                                                              >  SRR4302543.4261099/1‑94 (MQ=60)
               ATCACGGCGATAAA‑CCCCCATCCAGACAACGTGAGTCCAACGGCGCGAAGAAAGCCCCATCCGCAGCCAGTCCGGGGCGGTTAATACGCCGGTT                                                                              <  SRR4302543.6569782/94‑1 (MQ=60)
               ATCACGGCGATAAA‑CCCCCATCCAGACAACGTGAGTCCAACGGCGCGAAGAAAGCCCCATCCGCAGCCAGTCCGGGGCGGTTAATACGCCGGTT                                                                              >  SRR4302543.1220429/1‑94 (MQ=60)
               ATCACGGCGATAAA‑CCCCCATCCAGACAACGTGAGTCCAACGGCGCGAAGAAAGCCCCATCCGCAGCCAGTCCGGGGCGGTTAATACGCCGGTT                                                                              <  SRR4302543.3035563/94‑1 (MQ=60)
               ATCACGGCGATAAA‑CCCCCATCCAGACAACGTGAGTCCAACGGCGCGAAGAAAGCCCCATCCGCAGCCAGTCCGGGGCGGTTAATACGCCGGTT                                                                              >  SRR4302543.7414788/1‑94 (MQ=60)
                TCACGGCGATAAA‑CCCCCATCCAGACAACGTGAGTCCAACGGCGCGAAGAAAGCCCCATCCGCAGCCAGTCCGGGGCGGTTAATACGCCGGTTG                                                                             <  SRR4302543.112246/94‑1 (MQ=60)
                  CCGGCGATAAA‑CCCCCATCCAGACAACGTGAGTCCAACGGCGCGAAGAAAGCCCCATCCGCAGCCAGTCCGGGGCGGTTAATACGCCGGTTGAG                                                                           <  SRR4302543.2492498/94‑1 (MQ=60)
                  ACGGCGATAAA‑CCCCCATCCAGACAACGTGAGTCCAACGGCGCGAAGAAAGCCCCATCCGCAGCCAGTCCGGGGCGGTTAATACGCCGGTTGAG                                                                           >  SRR4302543.7456913/1‑94 (MQ=60)
                  ACGGCGATAAA‑CCCCCATCCAGACAACGTGAGTCCAACGGCGCGAAGAAAGCCCCATCCGCAGCCAGTCCGGGGCGGTTAATACGCCGGTTGAG                                                                           >  SRR4302543.377867/1‑94 (MQ=60)
                  ACGGCGATAAA‑CCCCCATCCAGACAACGTGAGTCCAACGGCGCGAAGAAAGCCCCATCCGCAGCCAGTCCGGGGCGGTTAATACGCCGGTTGAG                                                                           <  SRR4302543.3636252/94‑1 (MQ=60)
                  ACGGCGATAAA‑CCCCCATCCAGACAACGTGAGTCCAACGGCGCGAAGAAAGCCCCATCCGCAGCCAGTCCGGGGCGGTTAATACGCCGGTTGAG                                                                           <  SRR4302543.6263350/94‑1 (MQ=60)
                  ACGGCGATAAA‑CCCCCATCCAGACAACGTGAGTCCAACGGCGCGAAGAAAGCCCCATCCGCAGCCAGTCCGGGGCGGTTAATACGCCGGTTGAG                                                                           >  SRR4302543.3524182/1‑94 (MQ=60)
                  ACGGCGATAAA‑CCCCCATCCAGACAACGTGAGTCCAACGGCGCGAAGAAAGCCCCATCCGCAGCCAGTCCGGGGCGGTTAATACGCCGGTTGAG                                                                           >  SRR4302543.5510689/1‑94 (MQ=60)
                   CGGCGATAAA‑CCCCCATCCAGACAACGTGAGTCCAACGGCGCGAAGAAAGCCCCATCCGCAGCCAGTCCGGGGCGGTTAATACGCCGGTTGAGC                                                                          >  SRR4302543.6288520/1‑94 (MQ=60)
                    GGCGATAAA‑CCCCCATCCAGACAACGTGAGTCCAACGGCGCGAAGAAAGCCCCATCCGCAGCCAGTCCGGGGCGGTTAATACGCCGGTTGAGCG                                                                         >  SRR4302543.6767822/1‑94 (MQ=60)
                     GCGATAAA‑CCCCCAT‑CAGACAACGTGAGTCCAACGGCGCGAAGAAAGCCCCATCCGCAGCCAGTCCGGGGCGGTTAATACGCCGGTTGAGCGAA                                                                       <  SRR4302543.4439362/94‑1 (MQ=60)
                      ggaaAAA‑CCCCCATCCAGACAACGTGAGTCCAACGGCGCGAAGAAAGCCCCATCCGCAGCCAGTCCGGGGCGGTTAATACGCCGGTTGAGCGAA                                                                       <  SRR4302543.4439366/90‑1 (MQ=60)
                      CGATAAA‑CCCCCATCCAGACAACGTGAGTCCAACGGCGCGAAGAAAGCCCCATCCGCAGCCAGTCCGGGGCGGTTAATACGCCGGTTGAGCGAA                                                                       <  SRR4302543.2687127/94‑1 (MQ=60)
                       GATAAA‑CCCCCATCCAGACAACGTGAGTCCAACGGCGCGAAGAAAGCCCCATCCGCAGCCAGTCCGGGGCGGTTAATACGCCGGTTGAGCGAAG                                                                      >  SRR4302543.1659682/1‑94 (MQ=60)
                       GATAAA‑CCCCCATCCAGACAACGTGAGTCCAACGGCGCGAAGAAAGCCCCATCCGCAGCCAGTCCGGGGCGGTTAATACGCCGGTTGAGCGAAG                                                                      <  SRR4302543.3635755/94‑1 (MQ=60)
                        ATAAA‑CCCCCATCCAGACAACGTGAGTCCAACGGCGCGAAGAAAGCCCCATCCGCAGCCAGTCCGGGGCGGTTAATACGCCGGTTGAGCGAAGG                                                                     <  SRR4302543.5529556/94‑1 (MQ=60)
                        ATAAA‑CCCCCATCCAGACAACGTGAGTCCAACGGCGCGAAGAAAGCCCCATCCGCAGCCAGTCCGGGGCGGTTAATACGCCGGTTGAGCGAAGG                                                                     >  SRR4302543.3407765/1‑94 (MQ=60)
                        ATAAA‑CCCCCATCCAGACAACGTGAGTCCAACGGCGCGAAGAAAGCCCCATCCGCAGCCAGTCCGGGGCGGTTAATACGCCGGTTGAGCGAAGG                                                                     >  SRR4302543.6937176/1‑94 (MQ=60)
                         TAAC‑CCCCCATCCAGACAACGTGAGTCCAACGGCGCGAAGAAAGCCCCATCCGCAGCCAGTCCGGGGCGGTTAATACGCCGGTTGAGCGAAGGC                                                                    <  SRR4302543.4355951/94‑1 (MQ=60)
                         TAAA‑CCCCCATCCAGACAACGTGAGTCCAACGGCGCGAAGAAAGCCCCATCCGCAGCCAGTCCGGGGCGGTTAATACGCCGGTTGAGCGAAGGC                                                                    <  SRR4302543.4475569/94‑1 (MQ=60)
                         TAAA‑CCCCCATCCAGACAACGTGAGTCCAACGGCGCGAAGAAAGCCCCATCCGCAGCCAGTCCGGGGCGGTTAATACGCCGGTTGAGCGAAGGC                                                                    <  SRR4302543.4038129/94‑1 (MQ=60)
                          AAC‑CCCCCATCCAGACAACGTGAGTCCAACGGCGCGAAGAAAGCCCCATCCGCAGCCAGTCCGGGGCGGTTAATACGCCGGTTGAGCGAAGGCG                                                                   <  SRR4302543.5588797/94‑1 (MQ=60)
                          AAA‑CCCCCATCCAGACAACGTGAGTCCAACGGCGCGAAGAAAGCCCCATCCGCAGCCAGTCCGGGGCGGTTAATACGCCGGTTGAGCGAAGGCG                                                                   <  SRR4302543.1067629/94‑1 (MQ=60)
                          AAA‑CCCCCATCCAGACAACGTGAGTCCAACGGCGCGAAGAAAGCCCCATCCGCAGCCAGTCCGGGGCGGTTAATACGCCGGTTGAGCGAAGGCG                                                                   >  SRR4302543.1173955/1‑94 (MQ=60)
                          AAA‑CCCCCATCCAGACAACGTGAGTCCAACGGCGCGAAGAAAGCCCCATCCGCAGCCAGTCCGGGGCGGTTAATACGCCGGTTGAGCGAAGGCG                                                                   >  SRR4302543.7353223/1‑94 (MQ=60)
                          AAA‑CCCCCATCCAGACAACGTGAGTCCAACGGCGCGAAGAAAGCCCCATCCGCAGCCAGTCCGGGGCGGTTAATACGCCGGTTGAGCGAAGGCG                                                                   <  SRR4302543.1890669/94‑1 (MQ=60)
                          AAA‑CCCCCATCCAGACAACGTGAGTCCAACGGCGCGAAGAAAGCCCCATCCGCAGCCAGTCCGGGCCGGTTAATACGCCGGTTGAGCGAAGGCG                                                                   >  SRR4302543.6905450/1‑94 (MQ=60)
                           AA‑CCCCCATCCAGACAACGTGAGTCCAACGGCGCGAAGAAAGCCCCATCCGCAGCCAGTCCGGGGCGGTTAATACGCCGGTTGAGCGAAGGCGA                                                                  >  SRR4302543.4482000/1‑94 (MQ=60)
                            A‑CCCCCATCCAGACAACGTGAGTCCAACGGCGCGAAGAAAGCCCCATCCGCAGCCAGTCCGGGGCGGTTAGTACGCCGGTTGCGAGACGGCGAT                                                                 >  SRR4302543.2191499/1‑94 (MQ=60)
                            A‑CCCCCATCCAGACAACGTGAGTCCAACGGCGCGAAGAAAGCCCCATCCGCAGCCAGTCCGGGGCGGTTAATACGCCGGTTGAGCGAAGGCGAT                                                                 <  SRR4302543.4572690/94‑1 (MQ=60)
                            A‑CCCCCATCCAGACAACGTGAGTCCAACGGCGCGAAGAAAGCCCCATCCGCAGCCAGTCCGGGGCGGTTAATACGCCGGTTGAGCGAAGGCGAC                                                                 >  SRR4302543.7363617/1‑94 (MQ=60)
                              CCCCGCTCCAGACAACGTGAGTCCAACGGCGCGAAGAAAGCCCCATCCGCAGCCAGTCCGGGGCGGTTAATACGCCGGTTGAGCGAAGGCGATC                                                                <  SRR4302543.1666225/94‑1 (MQ=60)
                              CCCCCATCCAGACAACGTGAGTCCAACGGCGCGAAGAAAGCCCCATCCGCAGCCAGTCCGGGGCGGTTAATACGCCGGTTGAGCGAAGGCGATC                                                                >  SRR4302543.5771028/1‑94 (MQ=60)
                              CCCCCATCCAGACAACGTGAGTCCAACGGCGCGAAGAAAGCCCCATCCGCAGCCAGTCCGGGGCGGTTAATACGCCGGTTGAGCGAAGGCGATC                                                                <  SRR4302543.4928373/94‑1 (MQ=60)
                              CCCCCATCCAGACAACGTGAGTCCAACGGCGCGAAGAAAGCCCCATCCGCAGCCAGTCCGGGGCGGTTAATACGCCGGTTGAGCGAAGGCGATC                                                                >  SRR4302543.7889866/1‑94 (MQ=60)
                              ACCCCATCCAGACAACGTGAGTCCAACGGCGCGAAGAAAGCCCCATCCGCAGCCAGTCCGGGGCGGTTAATACGCCGGTTGAGCGAAGGCGATC                                                                <  SRR4302543.537259/94‑1 (MQ=60)
                               CCCCATCCAGACAACGTGAGTCCAACGGCGCGAAGAAAGCCCCATCCGCAGCCAGTCCGGGGCGGTTAATACGCCGGTTGAGCGAAGGCGATCG                                                               <  SRR4302543.5838072/94‑1 (MQ=60)
                               CCCCATCCAGACAACGTGAGTCCAACGGCGCGAAGAAAGCCCCATCCGCAGCCAGTCCGGGGCGGTTAATACGCCGGTTGAGCGAAGGCGATCG                                                               >  SRR4302543.6156641/1‑94 (MQ=60)
                               CCCCATCCAGACAACGTGAGTCCAACGGCGCGAAGAAAGCCCCATCCGCAGCCAGTCCGGGGCGGTTAATACGCCGGTTGAGCGAAGGCGATCG                                                               >  SRR4302543.3874611/1‑94 (MQ=60)
                               CCCCATCCAGACAACGTGAGTCCAACGGCGCGAAGAAAGCCCCATCCGCAGCCAGTCCGGGGCGGTTAATACGCCGGTTGAGCGAAGGCGATCG                                                               <  SRR4302543.934919/94‑1 (MQ=60)
                               CCCCATCCAGACAACGTGAGTCCAACGGCGCGAAGAAAGCCCCATCCGCAGCCAGTCCGGGGCGGTTAATACGCCGGTTGAGCGAAGGCGATCG                                                               <  SRR4302543.3014067/94‑1 (MQ=60)
                                CCCATCCAGACAACGTGAGTCCAACGGCGCGAAGAAAGCCCCATCCGCAGCCAGTCCGGGGCGGTTAATACGCCGGTTGAGCGAAGGCGATCGG                                                              >  SRR4302543.7780915/1‑94 (MQ=60)
                                CCCATCCAGACAACGTGAGTCCAACGGCGCGAAGAAAGCCCCATCCGCAGCCAGTCCGGGGCGGTTAATACGCCGGTTGAGCGAAGGCGATCGG                                                              <  SRR4302543.3200824/94‑1 (MQ=60)
                                CCCATCCAGACAACGTGAGTCCAACGGCGCGAAGAAAGCCCCATCCGCAGCCAGTCCGGGGCGGTTAATACGCCGGTTGAGCGAAGGCGATCGG                                                              <  SRR4302543.2919229/94‑1 (MQ=60)
                                CCCATCCAGACAACGTGAGTCCAACGGCGCGAAGAAAGCCCCATCCGCAGCCAGTCCGGGGCGGTTAATACGCCGGTTGAGCGAAGGCGATCGG                                                              >  SRR4302543.1536021/1‑94 (MQ=60)
                                CCCACCCAGACATCGTGAGTCCAACGGCGCGAAGAAATCCCCATCCGCAGCCAGTCCGGGGCGGTTAATACGCCGGTTGAGCGAAGGCGATCGG                                                              <  SRR4302543.4899048/94‑1 (MQ=60)
                                 CCATCCAGACAACGTGAGTCCAACGGCGCGAAGAAAGCCCCATCCGCAGCCAGTCCGGGGCGGTTAATACGCCGGTTGAGCGAAGGCGATCGGT                                                             <  SRR4302543.7237995/94‑1 (MQ=60)
                                 CCATCCAGACAACGTGAGTCCAACGGCGCGAAGAAAGCCCCATCCGCAGCCAGTCCGGGGCGGTTAATACGCCGGTTGAGCGAAGGCGATCGGT                                                             <  SRR4302543.6611261/94‑1 (MQ=60)
                                 CCATCCAGACAACGTGAGTCCAACGGCGCGAAGAAAGCCCCATCCGCAGCCAGTCCGGGGCGGTTAATACGCCGGTTGAGCGAAGGCGATCGGT                                                             <  SRR4302543.1272946/94‑1 (MQ=60)
                                 CCATCCAGACAACGTGAGTCCAACGGCGCGAAGAAAGCCCCATCCGCAGCCAGTCCGGGGCGGTTAATACGCCGGTTGAGCGAAGGCGATCGGT                                                             >  SRR4302543.5842042/1‑94 (MQ=60)
                                 CCATCCAGACAACGTGAGTCCAACGGCGCGAAGAAAGCCCCATCCGCAGCCAGTCCGGGGCGGTTAATACGCCGGTTGAGCGAAGGCGATCGGT                                                             >  SRR4302543.132326/1‑94 (MQ=60)
                                 CCATCCAGACAACGTGAGTCCAACGGCGCGAAGAAAGCCCCATCCGCAGCCAGTCCGGGGCGGTTAATACGCCGGTTGAGCGAAGGCGATCGGT                                                             <  SRR4302543.1301984/94‑1 (MQ=60)
                                  CATCCAGACAACGTGAGTCCAACGGCGCGAAGAAAGCCCCATCCGCAGCCAGTCCGGGGCGGTTAATACGCCGGTTGAGCGAAGGCGATCGGTG                                                            <  SRR4302543.1682827/94‑1 (MQ=60)
                                  CATCCAGACAACGTGAGTCCAACGGCGCGAAGAAAGCCCCATCCGCAGCCAGTCCGGGGCGGTTAATACGCCGGTTGAGCGAAGGCGATCGGTG                                                            <  SRR4302543.2245998/94‑1 (MQ=60)
                                  CATCCAGACAACGTGAGTCCAACGGCGCGAAGAAAGCCCCATCCGCAGCCAGTCCGGGGCGGTTAATACGCCGGTTGAGCGAAGGCGATCGGTG                                                            <  SRR4302543.7241173/94‑1 (MQ=60)
                                  CATCCAGACAACGTGAGTCCAACGGCGCGAAGAAAGCCCCATCCGCAGCCAGTCCGGGGCGGTTAATACGCCGGTTGAGCGAAGGCGATCGGTG                                                            <  SRR4302543.5649194/94‑1 (MQ=60)
                                   ATCCAGACAACGTGAGTCCAACGGCGCGAAGAAAGCCCCATCCGCAGCCAGTCCGGGGCGGTTAATACGCCGGTTGAGCGAAGGCGATCGGTGG                                                           <  SRR4302543.464858/94‑1 (MQ=60)
                                   ATCCAGACAACGTGAGTCCAACGGCGCGAAGAAAGCCCCATCCGCAGCCAGTCCGGGGCGGTTAATACGCCGGTTGAGCGAAGGCGATCGGTGG                                                           <  SRR4302543.5621509/94‑1 (MQ=60)
                                    TCCAGACAACGTGAGTCCAACGGCGCGAAGAAAGCCCCATCCGCAGCCAGTCCGGGGCGGTTAATACGCCGGTTGAGCGAAGGCGATCGGGGGG                                                          >  SRR4302543.3036989/1‑94 (MQ=60)
                                     CCAGACAACGTGAGTCCAGCGGCGCGAAGAAAGCCCCATCCGCAGCCAGTCCGGGGCGGTTAATACGCCGGTTGAGCGAAGGCGATCGGTGGGG                                                         <  SRR4302543.3521746/94‑1 (MQ=60)
                                     CCAGACAACGTGAGTCCAACGGCGCGAAGAAAGCCCCATCCGCAGCCAGTCCGGGGCGGTTAATACGCCGGTTGAGCGAAGGCGATCGGTGGGG                                                         >  SRR4302543.1922756/1‑94 (MQ=60)
                                      CAGACAACGTGAGTCCAACGGCGCGAAGAAAGCCCCATCCGCAGCCAGTTCGGGGCGGTTAATACGCCGGTTGAGCGAAGGCGATCGGTGGGGA                                                        <  SRR4302543.6111943/94‑1 (MQ=60)
                                      CAGACAACGTGAGTCCAACGGCGCGAAGAAAGCCCCATCCGCAGCCAGTCCGGGGCGGTTAATACGCCGGTTGAGCGAAGGCGATCGGTGGGGA                                                        <  SRR4302543.2399188/94‑1 (MQ=60)
                                       AGACAACGTGAGTCCAACGGCGCGAAGAAAGCCCCATCCGCAGCCAGTCCGGGGCGGTTAATACGCCGGTTGAGTGAAGGCGATCGGTGGGGAT                                                       <  SRR4302543.2866913/94‑1 (MQ=60)
                                       AGACAACGTGAGTCCAACGGCGCGAAGAAAGCCCCATCCGCAGCCAGTCCGGGGCGGTTAATACGCCGGTTGAGCGAAGGCGATCGGTGGGGAT                                                       <  SRR4302543.5366345/94‑1 (MQ=60)
                                       AGACAACGTGAGTCCAACGGCGCGAAGAAAGCCCCATCCGCAGCCAGTCCGGGGCGGTTAATACGCCGGTTGAGCGAAGGCGATCGGTGGGGAT                                                       >  SRR4302543.131357/1‑94 (MQ=60)
                                       AGACAACGTGAGTCCAACGGCGCGAAGAAAGCCCCATCCGCAGCCAGTCCGGGGCGGTTAATACGCCGGTTGAGCGAAGGCGATCGGTGGGGAT                                                       >  SRR4302543.7601389/1‑94 (MQ=60)
                                       AGACAACGTGAGTCCAACGGCGCGAAGAAAGCCCCATCCGCAGCCAGTCCGGGGCGGTTAATACGCCGGTTGAGCGAAGGCGATCGGTGGGGAT                                                       >  SRR4302543.2659191/1‑94 (MQ=60)
                                        GACAACGTGAGTCCAACGGCGCGAAGAAAGCCCCATCCGCAGCCAGTCCGGGGCGGTTAATACGCCGGTTGAGCGAAGGCGATCGGTGGGGATG                                                      <  SRR4302543.156271/94‑1 (MQ=60)
                                        GACAACGTGAGTCCAACGGCGCGAAGAAAGCCCCATCCGCAGCCAGTCCGGGGCGGTTAATACGCCGGTTGAGCGAAGGCGATCGGTGGGGATG                                                      <  SRR4302543.1805328/94‑1 (MQ=60)
                                           AACGTGAGTCCAACGGCGCGAAGAAAGCCCCATCCGCAGCCAGTCCGGGGCGGTTAATACGCCGGTTGAGCGAAGGCGATCGGTGGGGATGGAT                                                   >  SRR4302543.4401712/1‑94 (MQ=60)
                                            ACGTGAGTCCAACGGCGCGAAGAAAGCCCCATCCGCAGCCAGTCCGGGGCGGTTAATACGCCGGTTGAGCGAAGGCGATCGGTGGGGATGGATT                                                  >  SRR4302543.6901714/1‑94 (MQ=60)
                                            ACGTGAGTCCAACGGCGCGAAGAAAGCCCCATCCGCAGCCAGTCCGGGGCGGTTAATACGCCGGTTGAGCGAAGGCGATCGGTGGGGATGGATT                                                  <  SRR4302543.5137655/94‑1 (MQ=60)
                                             CGTGAGTCCAACGGCGCGAAGAAAGCCCCATCCGCAGCCAGTCCGGGGCGGTTAATACGCCGGTTGAGCGAAGGCGATCGGTGGGGATGGATTG                                                 >  SRR4302543.739346/1‑94 (MQ=60)
                                             CGTGAGTCCAACGGCGCGAAGAAAGCCCCATCCGCAGCCAGTCCGGGGCGGTTAATACGCCGGTTGAGCGAAGGCGATCGGTGGGGATGGATTG                                                 >  SRR4302543.4253301/1‑94 (MQ=60)
                                             CGTGAGTCCAACGGCGCGAAGAAAGCCCCATCCGCAGCCAGTCCGGGGCGGTTAATACGCCGGTTGAGCGAAGGCGATCGGTGGGGATGGATTG                                                 <  SRR4302543.7701039/94‑1 (MQ=60)
                                             CGTGAGTCCAACGGCGCGAAGAAAGCCCCATCCGCAGCCAGTCCGGGGCGGTTAATACGCCGGTTGAGCGAAGGCGATCGGTGGGGATGGATTG                                                 >  SRR4302543.174267/1‑94 (MQ=60)
                                              GTGAGTCCAACGGCGCGAAGAAAGCCCCATCCGCAGCCAGTCCGGGGCGGTTAATACGCCGGTTGAGCGAAGGCGATCGGTGGGGATGGATTGC                                                <  SRR4302543.6458320/94‑1 (MQ=60)
                                               TGAGTCCAACGGCGCGAAGAAAGCCCCATCCGCAGCCAGTCCGGGGCGGTTAATACGCCGGTTGAGCGAAGGCGATCGGTGGGGATGGATTGCC                                               >  SRR4302543.6632862/1‑94 (MQ=60)
                                                GAGTCCAACGGCGCGAAGAAAGCCCCATCCGCAGCCAGTCCGGGGCGGTTAATACGCCGGTTGAGCGAAGGCGATCGGTGGGGATGGATTGCCA                                              >  SRR4302543.410481/1‑94 (MQ=60)
                                                 AGTCCAACGGCGCGAAGAAAGCCCCATCCGCAGCCAGTCCGGGGCGGTTAATACGCCGGTTGAGCGAAGGCGATCGGTGGGGATGGATTGCCAG                                             >  SRR4302543.2883682/1‑94 (MQ=60)
                                                 AGTCCAACGGCGCGAAGAAAGCCCCATCCGCAGCCAGTCCGGGGCGGTTAATACGCCGGTTGAGCGAAGGCGATCGGTGGGGATGGATTGCCAG                                             >  SRR4302543.2690909/1‑94 (MQ=60)
                                                 AGTCCAACGGCGCAAAGAAAGCCCCATCCGCAGCCAGTCCGGGGCGGTTAATACGCCGGTTGAGAGAAGGCGATCGGTGGGGATGGATTGCCAG                                             <  SRR4302543.6796052/94‑1 (MQ=60)
                                                  GTCCAACGGCGCGAAGAAAGCCCCATCCGCAGCCAGTCCGGGGCGGTTAATACGCCGGTTGAGCGAAGGCGATCGGTGGGGATGGATTGCCAGG                                            >  SRR4302543.7780870/1‑94 (MQ=60)
                                                   TCCAACGGCGCGAAGAAAGCCCCATCCGCAGCCAGTCCGGGGCGGTTAATACGCCGGTTGAGCGAAGGCGATCGGTGGGGATGGATTGCCAGGT                                           >  SRR4302543.5065491/1‑94 (MQ=60)
                                                   TCCAACGGCGCGAAGAAAGCCCCATCCGCAGCCAGTCCGGGGCGGTTAATACGCCGGTTGAGCGAAGGCGATCGGTGGGGATGGATTGCCAGGT                                           <  SRR4302543.6094892/94‑1 (MQ=60)
                                                   TCCAACGGCGCGAAGAAAGCCCCATCCGCAGCCAGTCCGGGGCGGTTAATACGCCGGTTGAGCGAAGGCGATCGGTGGGGATGGATTGCCAGGT                                           <  SRR4302543.1825679/94‑1 (MQ=60)
                                                     CAACGGCGCGAAGAAAGCCCCATCCGCAGCCAGTCCGGGGCGGTTAATACGCCGGTTGAGCGAAGGCGATCGGTGGGGATGGATTGCCAGGTTT                                         >  SRR4302543.3051073/1‑94 (MQ=60)
                                                     CAACGGCGCGAAGAAAGCCCCATCCGCAGCCAGTCCGGGGCGGTTAATACGCCGGTTGAGCGAAGGCGATCGGTGGGGATGGATTGCCAGGTTT                                         <  SRR4302543.6009984/94‑1 (MQ=60)
                                                      AACGGCGCGAAGAAAGCCCCATCCGCAGCCAGTCCGGGGCGGTTAATACGCCGGTTGAGCGAAGGCGATCGGTGGGGATGGATTGCCAGGTTTC                                        >  SRR4302543.4635152/1‑94 (MQ=60)
                                                      AACGGCGCGAAGAAAGCCCCATCCGCAGCCAGTCCGGGGCGGTTAATACGCCGGTTGAGCGAAGGCGATCGGTGGGGATGGATTGCCAGGTTTC                                        >  SRR4302543.2778325/1‑94 (MQ=60)
                                                       ACGGCGCGAAGAAAGCCCCATCCGCAGCCAGTCCGGGGCGGTTAATACGCCGGTTGAGCGAAGGCGATCGGTGGGGATGGATTGCCAGGTTTCT                                       <  SRR4302543.1314305/94‑1 (MQ=60)
                                                         GGCGCGAAGAAAGCCCCATCCGCAGCCAGTCCGGGGCGGTTAATACGCCGGTTGAGCGAAGGCGATCGGTGGGGATGGATTGCCAGGTTTCTCC                                     <  SRR4302543.7741458/94‑1 (MQ=60)
                                                         GGCGCGAAGAAAGCCCCATCCGCAGCCAGTCCGGGGCGGTTAATACGCCGGTTGAGCGAAGGCGATCGGTGGGGATGGATTGCCAGGTTTCTCC                                     >  SRR4302543.5050821/1‑94 (MQ=60)
                                                         GGCGCGAAGAAAGCCCCATCCGCAGCCAGTCCGGGGCGGTTAATACGCCGGTTGAGCGAAGGCGATCGGTGGGGATGGATTGCCAGGTTTCTCC                                     <  SRR4302543.1288653/94‑1 (MQ=60)
                                                         GGCGCGAAGAAAGCCCCATCCGCAGCCAGTCCGGGGCGGTTAATACGCCGGTTGAGCGAAGGCGATCGGTGGGGATGGATTGCCAGGTTTCTCC                                     <  SRR4302543.7741459/94‑1 (MQ=60)
                                                           CGCGAAGAAAGCCCCATCCGCAGCCAGTCCGGGGCGGTTAATACGCCGGTTGAGCGAAGGCGATCGGTGGGGATGGATTGCCAGGTTTCTCCCG                                   >  SRR4302543.4481485/1‑94 (MQ=60)
                                                           CGCGAAGAAAGCCCCATCCGCAGCCAGTCCGGGGCGGTTAATACGCCGGTTGAGCGAAGGCGATCGGTGGGGATGGATTGCCAGGTTTCTCCCG                                   <  SRR4302543.778364/94‑1 (MQ=60)
                                                             CGAAGAAAGCCCCATCCGCAGCCAGTCCGGGGCGGTTAATACGCCGGTTGAGCGAAGGCGATCGGTGGGGATGGATTGCCAGGTTTCTCCCGTT                                 >  SRR4302543.6633825/1‑94 (MQ=60)
                                                             CGAAGAAAGCCCCATCCGCAGCCAGTCCGGGGCGGTTAATACGCCGGTTGAGCGAAGGCGATCGGTGGGGATGGATTGCCAGGTTTCTCCCGTT                                 >  SRR4302543.4379969/1‑94 (MQ=60)
                                                               AAGAAAGCCCCATCCGCAGCCAGTCCGGGGCGGTTAATACGCCGGTTGAGCGAAGGCGATCGGTGGGGATGGATTGCCAGGTTTCTCCCGTTTC                               >  SRR4302543.3350093/1‑94 (MQ=60)
                                                               AAGAAAGCCCCATCCGCAGCCAGTCCGGGGCGGTTAATACGCCGGTTGAGCGAAGGCGATCGGTGGGGATGGATTGCCAGGTTTCTCCCGTTTC                               <  SRR4302543.6047409/94‑1 (MQ=60)
                                                                AGAAAGCCCCATCCGCAGCCAGTCCGGGGCGGTTAATACGCCGGTTGAGCGAAGGCGATCGGTGGGGATGGATTGGCAGGGTTCTCCCGTTTCA                              >  SRR4302543.3636487/1‑94 (MQ=60)
                                                                AGAAAGCCCCATCCGCAGCCAGTCCGGGGCGGTTAATACGCCGGTTGAGCGAAGGCGATCGGTGGGGATGGATTGCCAGGTTTCTCCCGTTTCA                              >  SRR4302543.1052029/1‑94 (MQ=60)
                                                                AGAAAGCCCCATCCGCAGCCAGTCCGGGGCGGTTAATACGCCGGTTGAGCGAAGGCGATCGGTGGGGATGGATTGCCAGGTTTCTCCCGTTTCA                              <  SRR4302543.2113521/94‑1 (MQ=60)
                                                                AGAAAGCCCCATCCGCAGACAGTCCGGGGCGGTTAATACGCCGGTTGAGCGAAGGCGATCGGTGGGGATGGATTGCCAGGTTTCTCCCGTTTCA                              <  SRR4302543.3368722/94‑1 (MQ=60)
                                                                 GAAAGCCCCATCCGCAGCCAGTCCGGGGCGGTTAATACGCCGGTTGAGCGAAGGCGATCGGTGGGGATGGATTGCCAGGTTTCTCCCGTTTCAC                             <  SRR4302543.4092485/94‑1 (MQ=60)
                                                                 GAAAGCCCCATCCGCAGCCAGTCCGGGGCGGTTAATACGCCGGTTGAGCGAAGGCGATCGGTGGGGATGGATTGCCAGGTTTCTCCCGTTTCAC                             >  SRR4302543.2045698/1‑94 (MQ=60)
                                                                 GAAAGCCCCATCCGCAGCCAGTCCGGGGCGGTTAATACGCCGGTTGAGCGAAGGCGATCGGTGGGGATGGATTGCCAGGTTTCTCCCGTTTCAC                             >  SRR4302543.2062182/1‑94 (MQ=60)
                                                                 AAAAGCCCCATCCGCAGCCAGTCCGGGGCGGTTAATACGCCGGTTGAGCGAAGGCGATCGGTGGGGATGGATTGCCAGGTTTCTCCCGTTTCAC                             <  SRR4302543.6256970/94‑1 (MQ=60)
                                                                 AAAAGCCCCATCCGCAGCCAGTCCGGGGCGGTTAATACGCCGGTTGAGCGAAGGCGATCGGTGGGGATGGATTGCCAGGTTTCTCCCGTTTCAC                             <  SRR4302543.3532047/94‑1 (MQ=60)
                                                                  AAAGCCCCATCCGCAGCCAGTCCGGGGCAGTTAGTACGCCGGTTGAGCGAAGGCGATCGGTGGGGATGGATTGACAGGTTTCACCCGTTTCGCG                            <  SRR4302543.7113006/94‑1 (MQ=60)
                                                                   AAGCCCCATCCGCAGCCAGTCCGGGGCGGTTAATACGCCGGTTGAGCGAAGGCGATCGGTGGGGATGGATTGCCAGGTTTCTCCCGTTTCACGA                           >  SRR4302543.4610311/1‑94 (MQ=60)
                                                                    AGCCCCATCCGCAGCCAGTCCGGGGCGGTTAATACGCCGGTTGAGCGAAGGCGATCGGTGGGGATGGATTGCCAGGTTTCTCCCGTTTCACGAA                          >  SRR4302543.2706179/1‑94 (MQ=60)
                                                                     GCCCCATCCGCAGCCAGTCCGGGGCGGTTAATACGCCGGTTGAGCGAAGGCGATCGGTGGGGATGGATTGCCAGGTTTCTCCCGTTTCACGAAA                         <  SRR4302543.3582178/94‑1 (MQ=60)
                                                                     GCCCCATCCGCAGCCAGTCCGGGGCGGTTAATACGCCGGTTGAGCGAAGGCGATCGGTGGGGATGGATTGCCAGGTTTCTCCCGTTTCACGAAA                         >  SRR4302543.1853146/1‑94 (MQ=60)
                                                                     GCCCCATCCGCAGCCAGTCCGGGGCGGTTAATACGCCGGTTGAGCGAAGGCGATCGGTGGGGATGGATTGCCAGGTTTCTCCCGTTTCACGAAA                         >  SRR4302543.393256/1‑94 (MQ=60)
                                                                      CCCCATCCGCAGCCAGTCCGGGTCGGTTAATACGCCTGTTGAGCGAAGGCGATCGGTGGGGATGGATTGCCAGGTTTCTCCCGTTTCACGAAAA                        >  SRR4302543.1397486/1‑94 (MQ=60)
                                                                      CCCCATCCGCAGCCAGTCCGGGGCGGTTAATACGCCGGTTGAGCGAAGGCGATCGGTGGGGATGGATTGCCAGGTTTCTCCCGTTTCACGAAAA                        >  SRR4302543.276930/1‑94 (MQ=60)
                                                                      CCCCATCCGCAGCCAGTCCGGGGCGGTTAATACGCCGGTTGAGCGAAGGCGATCGGTGGGGATGGATTGCCAGGTTTCTCCCGTTTCACGAAAA                        >  SRR4302543.3302122/1‑94 (MQ=60)
                                                                       CCCATCCGCAGCCAGTCCGGGGCGGTTAATACGCCGGTTGAGCGAAGGCGATCGGTGGGGATGGATTGCCAGGTTTCTCCCGTTTCACGAAAAC                       >  SRR4302543.7407204/1‑94 (MQ=60)
                                                                       CCCATCCGCAGCCAGTCCGGGGCGGTTAATACGCCGGTTGAGCGAAGGCGATCGGTGGGGATGGATTGCCAGGTTTCTCCCGTTTCACGAAAAC                       <  SRR4302543.4367135/94‑1 (MQ=60)
                                                                        CCATCCGCAGCCAGTCCGGGGCGGTTAATACGCCGGTTGAGCGAAGGGGATCGGTGGGGATGGATTGCCAGGTTTCTCCCGTTTCACGAAAACA                      >  SRR4302543.2177430/1‑94 (MQ=60)
                                                                        CCATCCGCAGCCAGTCCGGGGCGGTTAATACGCCGGTTGAGCGAAGGCGATCGGTGGGGATGGATTGCCAGGTTTCTCCCGTTTCACGAAAACA                      >  SRR4302543.7391458/1‑94 (MQ=60)
                                                                        CCATCCGCAGCCAGTCCGGGGCGGTTAATACGCCGGTTGAGCGAAGGCGATCGGTGGGGATGGATTGCCAGGGTTCTCCCGTTTCACGAAAACC                      >  SRR4302543.3146264/1‑94 (MQ=60)
                                                                         CATCCGCAGCCAGTCCGGGGCGGTTAATACGCCGGTTGAGCGAAGGCGATCGGTGGGGATGGATTGCCAGGTTTCTCCCGTTTCACGAAAACAC                     >  SRR4302543.3168293/1‑94 (MQ=60)
                                                                         CATCCGCAGCCAGTCCGGGGCGGTTAATACGCCGGTTGAGCGAAGGCGATCGGTGGGGATGGATTGCCAGGTTTCTCCCGTTTCACGAAAACAC                     >  SRR4302543.155294/1‑94 (MQ=60)
                                                                         CATCCGCAGCCAGTCCGGGGCGGTTAATACGCCGGTTGAGCGAAGGCGATCGGTGGGGATGGATTGCCAGGTTTCTCCCGTTTCACGAAAACAC                     <  SRR4302543.3695638/94‑1 (MQ=60)
                                                                          ATCCGCAGCCAGTCCGGGGCGGTTAATACGCCGGTTGAGCGAAGGCGATCGGTGGGGATGGATTGCCAGGTTTCTCCCGTTTCACGAAAACACC                    <  SRR4302543.6347495/94‑1 (MQ=60)
                                                                          ATCCGCAGCCAGTCCGGGGCGGTTAATACGCCGGTTGAGCGAAGGCGATCGGTGGGGATGGATTGCCAGGTTTCTCCCGTTTCACGAAAACACC                    >  SRR4302543.6199465/1‑94 (MQ=60)
                                                                          ATCCGCAGCCAGTCCGGGGCGGTTAATACGCCGGTTGAGCGAAGGCGATCGGTGGGGATGGATTGCCAGGTTTCTCCCGTTTCACGAAAACACC                    >  SRR4302543.6199463/1‑94 (MQ=60)
                                                                          ATCCGCAGCCAGTCCGGGGCGGTTAATACGCCGGTTGAGCGAAGGCGATCGGTGGGGATGGATTGCCAGGTTTCTCCCGTTTCACGAAAACACC                    >  SRR4302543.5218826/1‑94 (MQ=60)
                                                                          ATCCGCAGCCAGTCCGGGGCGGTTAATACGCCGGTTGAGCGAAGGCGATCGGTGGGGATGGATTGCCAGGTTTCTCCCGTTTCACGAAAACACC                    <  SRR4302543.5532689/94‑1 (MQ=60)
                                                                            CCGCAGCCAGTCCGGGGCGGTTAATACGCCGGTTGAGCGAAGGCGATCGGTGGGGATGGATTGCCAGGTTTCTCCCGTTTCACGAAAACACCAG                  <  SRR4302543.7917667/94‑1 (MQ=60)
                                                                            CCGCAGCCAGTCCGGGGCGGTTAATACGCCGGTTGAGCGAAGGCGATCGGTGGGGATGGATTGCCAGGTTTCTCCCGTTTCACGAAAACACCAG                  >  SRR4302543.1255999/1‑94 (MQ=60)
                                                                             CGCAGCCAGTCCGGGGCGGTTAATACGCCGGTTGAGCGAAGGCGATCGGTGGGGATGGATTGCCAGGTTTCTCCCGTTTCACGAAAACACCAGT                 <  SRR4302543.7859961/94‑1 (MQ=60)
                                                                              GCAGCCAGTCCGGGGCGGTTAATACGCCGGTTGAGCGAAGGCGATCGGTGGGGATGGATTGCCAGGTTTCTCCCGTTTCACGAAAACACCAGTC                <  SRR4302543.6536595/94‑1 (MQ=60)
                                                                               CAGCCAGTCCGGGGCGGTTAATACGCCGGTTGAGCGAAGGCGATCGGTGGGGATGGATTGCCAGGTTTCTCCCGTTTCACGAAAACACCAGTCA               >  SRR4302543.4824053/1‑94 (MQ=60)
                                                                               CAGCCAGTCCGGGGCGGTTAATACGCCGGTTGAGCGAAGGCGATCGGTGGGGATGGATTGCCAGGTTTCTCCCGTTTCACGAAAACACCAGTCA               <  SRR4302543.70213/94‑1 (MQ=60)
                                                                                AGCCAGTCCGGGGCGGTTAATACGCCGGTTGAGCGAAGGCGATCGGTGGGGATGGATTGCCAGGTTTCTCCCGTTTCACGAAAACACCAGTCAG              >  SRR4302543.2952708/1‑94 (MQ=60)
                                                                                AGCCAGTCCGGGGCGGTTAATACGCCGGTTGAGCGAAGGCGATCGGTGGGGATGGATTGCCAGGTTTCTCCCGTTTCACGAAAACACCAGTCAG              >  SRR4302543.3650825/1‑94 (MQ=60)
                                                                                AGCCAGTCCGGGGCGGTTAATACGCCGGTTGAGCGAAGGCGATCGGTGGGGATGGATTGCCAGGATTCTCCCGTTTCACGAAAACACCAGTCAG              >  SRR4302543.5973961/1‑94 (MQ=60)
                                                                                 GCCAGTCCGGGGCGGTTAATACGCCGGTTGAGCGAAGGCGATCGGTGGGGATGGATTGCCAGGTTTCTCCCGTTTCACGAAAACACCAGTCAGC             <  SRR4302543.2361438/94‑1 (MQ=60)
                                                                                 GCCAGTCCGGGGCGGTTAATACGCCGGTTGAGCGAAGGCGATCGGTGGGGATGGATTGCCAGGTTTCTCCCGTTTCACGAAAACACCAGTCAGC             >  SRR4302543.4063992/1‑94 (MQ=60)
                                                                                 GCCAGTCCGGGGCGGTTAATACGCCGGTTGAGCGAAGGCGATCGGTGGGGATGGATTGCCAGGTTTCTCCCGTTTCACGAAAACACCAGTCAGC             <  SRR4302543.3419558/94‑1 (MQ=60)
                                                                                  CCAGTCCGGGGCGGTTAATACGCCGGTTGAGCGAAGGCGATCGGTGGGGATGGATTGCCAGGTTTCTCCCGTTTCACGAAAACACCAGTCAGCG            <  SRR4302543.6584250/94‑1 (MQ=60)
                                                                                    AGTCCGGGGCGGTTAATACGCCGGTTGAGCGAAGGCGATCGGTGGGGATGGATTGCCAGGTTTCTCCCGTTTCACGAAAACCCCAGTCAGCGTT          >  SRR4302543.4198574/1‑94 (MQ=60)
                                                                                    AGTCCGGGGCGGTTAATACGCCGGTTGAGCGAAGGCGATCGGTGGGGATGGATTGCCAGGTTTCTCCCGTTTCACGAAAACACCAGTCAGCGTT          >  SRR4302543.5961709/1‑94 (MQ=60)
                                                                                    AGTCCGGGGCGGTTAATACGCCGGTTGAGCGAAGGCGATCGGTGGGGATGGATTGCCAGGTTTCTCCCGTTTCACGAAAACACCAGTCAGCGTT          >  SRR4302543.4198800/1‑94 (MQ=60)
                                                                                     GTCCGGGGCGGTTAATACGCCGGTTGAGCGAAGGCGATCGGTGGGGATGGATTGCCAGGTTTCTCCCGTTTCACGAAAACACCAGTCAGCGTTG         >  SRR4302543.2303320/1‑94 (MQ=60)
                                                                                     GTCCGGGGCGGTTAATACGCCGGTTGAGCGAAGGCGATCGGTGGGGATGGATTGCCAGGTTTCTCCCGTTTCACGAAAACACCAGTCAGCGTTG         <  SRR4302543.1811924/94‑1 (MQ=60)
                                                                                     GTCCGGGGCGGTTAATACGCCGGTTGAGCGAAGGCGATCGGTGGGGATGGATTGCCAGGTTTCTCCCGTTTCACGAAAACACCAGTCAGCGTTG         >  SRR4302543.2279771/1‑94 (MQ=60)
                                                                                     GTCCGGGGCGGTTAATACGCCGGTTGAGCGAAGGCGATCGGTGGGGATGGATTGCCAGGTTTCTCCCGTTTCACGAAAACACCAGTCAGCGTTG         <  SRR4302543.5355359/94‑1 (MQ=60)
                                                                                     GTCCGGGGCGCTTAATACGCCGGTTGAGCTAAGGCGATCGGTGGGGATGGATTGCCAGGTTTCTCCCGTTTCACGAAAACACCAGTCAGCGTTG         <  SRR4302543.5355360/94‑1 (MQ=60)
                                                                                        CGGGGCGGTTAATACGCCGGTTGAGCGAAGGCGATCGGTGGGGATGGATTGCCAGGTTTCTCCCGTTTCACGAAAACACCAGTCAGCGTTGCAC      <  SRR4302543.3259095/94‑1 (MQ=60)
                                                                                         GGGGCGGTTAATACGCCGGTTGAGCGAAGGCGATCGGTGGGGATGGATTGCCAGGTTTCTCCCGTTTCACGAAAACACCAGTCAGCGTTGCACT     <  SRR4302543.5431533/94‑1 (MQ=60)
                                                                                         GGGGCGGTTAATACGCCGGTTGAGCGAAGGCGATCGGTGGGGATGGATTGCCAGGTTTCTCCCGTTTCACGAAAACACCAGTCAGCGTTGCACT     <  SRR4302543.5247339/94‑1 (MQ=60)
                                                                                         GGGGCGGTTAATACGCCGGTTGAGCGAAGGCGATCGGTGGGGATGGATTGCCAGGTTTCTCCCGTTTCACGAAAACACCAGTCAGCGTTGCACT     >  SRR4302543.4546829/1‑94 (MQ=60)
                                                                                         GGGGCGGTTAATACGCCGGTTGAGCGAAGGCGATCGGTGGGGATGGATTGCCAGGTTTCTCCCGTTTCACGAAAACACCAGTCAGCGTTGCACT     >  SRR4302543.4546828/1‑94 (MQ=60)
                                                                                            GCGGTTAATACGCCGGTTGAGCGAAGGCGATCGGTGGGGATGGATTGCCAGGTTTCTCCCGTTTCACGAAAACACCAGTCAGCGTTGCACTGCG  <  SRR4302543.5220298/94‑1 (MQ=60)
                                                                                            GCGGTTAATACGCCGGTTGAGCGAAGGCGATCGGTGGGGATGGATTGCCAGGTTTCTCCCGTTTCACGAAAACACCAGTCAGCGTTGCACTGCG  <  SRR4302543.5220296/94‑1 (MQ=60)
                                                                                            GCGGTTAATACGCCGGTTGAGCGAAGGCGATCGGTGGGGATGGATTGCCAGGTTTCTCCCGTTTCACGAAAACACCAGTCAGCGTTGCACTGCG  <  SRR4302543.3756873/94‑1 (MQ=60)
                                                                                            GCGGTTAATACGCCGGTTGAGCGAAGGCGATCGGTGGGGATGGATTGCCAGGTTTCTCCCGTTTCACGAAAACACCAGTCAGCGTTGCACTGCC  >  SRR4302543.1691998/1‑94 (MQ=60)
                                                                                            |                                                                                             
ATTTTTAACAATAACATCACGGCGATAAA‑CCCCCATCCAGACAACGTGAGTCCAACGGCGCGAAGAAAGCCCCATCCGCAGCCAGTCCGGGCCGGTTAATACGCCGGTTGAGCGAAGGCGATCGGTGGGGATGGATTGCCAGGTTTCTCCCGTTTCACGAAAACACCAGTCAGCGTTGCACTGCG  >  NC_000913/3787172‑3787356

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 2 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑