Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A1 F1 I1 R1 1696 279.3 15874187 97.8% 15524954 93.0

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 3,787,906 A→G intergenic (‑198/+41) yibD ← / ← tdh putative regulator/threonine dehydrogenase

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009133,787,9060AG99.6% 1400.5 / ‑4.0 441intergenic (‑198/+41)yibD/tdhputative regulator/threonine dehydrogenase
Reads supporting (aligned to +/- strand):  ref base A (1/1);  new base G (238/201);  total (239/202)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.36e-01

Only 100 of 442 total aligned reads displayed.

GTAGAGAGATAATGAGAGCAGCTATATAAGAGATCAGCACAATTACGAACTCTTTATTACACTGACAGGATTTTACATATTTAACAGATTATCCTCAGATAAAAGGGCTGGAATACCAGCCCTTGTTCGTGTTAATCCCAGCTCAGAATAACTTTCCCGGACTGGCCCGAACGCATAGCG  >  NC_000913/3787816‑3787995
                                                                                          |                                                                                         
    agagaTAATGAGAGCAGCTATATAAGAGATCAGCACAATTACGAACTCTTTATTACACTGACAGGATTTTACATATTTAACAGATTGTCCTCa                                                                                     <  1:4528285/93‑1 (MQ=255)
    agagaTAATGAGAGCAGCTATATAAGAGATCAGCACAATTACGAACTCTTTATTACACTGACAGGATTTTACATATTTAACAGATTGTCCTCa                                                                                     <  1:7329380/93‑1 (MQ=255)
      agaTAATGAGAGCAGCTATATAAGAGATCAGCACAATTACGAACTCTTTATTACACTGACAGGATTTTACATATTTAACAGATTGTCCTCAGa                                                                                   >  1:718511/1‑93 (MQ=255)
       gaTAATGAGAGCAGCTATATAAGAGATCAGCACAATTACGAACTCTTTATTACACTGACAGGATTTTACATATTTAACAGATTGTCCTCAGAt                                                                                  >  2:2756585/1‑93 (MQ=255)
       gaTAATGAGAGCAGCTATATAAGAGATCAGCACAATTACGAACTCTTTATTACACTGACAGGATTTTACATATTTAACAGATTGTCCTCAGAt                                                                                  >  2:689337/1‑93 (MQ=255)
       gaTAATGAGAGCAGCTATATAAGAGATCAGCACAATTACGAACTCTTTATTACACTGACAGGATTTTACATATTTAACAGATTGTCCTCAGAt                                                                                  >  1:1344529/1‑93 (MQ=255)
        aTAATGAGAGCAGCTATATAAGAGATCAGCACAATTACGAACTCTTTATTACACTGACAGGATTTTACATATTTAACAGATTGTCCTCAGATa                                                                                 <  1:7655605/93‑1 (MQ=255)
        aTAATGAGAGCAGCTATATAAGAGATCAGCACAATTACGAACTCTTTATTACACTGACAGGATTTTACATATTTAACAGATTGTCCTCAGATa                                                                                 >  1:4993498/1‑93 (MQ=255)
         tAATGAGAGCAGCTATATAAGAGATCAGCACAATTACGAACTCTTTATTACACTGACAGGATTTTACATATTTAACAGATTGTCCTCAGATaa                                                                                >  2:4208934/1‑93 (MQ=255)
          aaTGAGAGCAGCTATATAAGAGATCAGCACAATTACGAACTCTTTATTACACTGACAGGATTTTACATATTTAACAGATTGTCCTCAGATaaa                                                                               <  2:3261698/93‑1 (MQ=255)
           aTGAGAGCAGCTATATAAGAGATCAGCACAATTACGAACTCTTTATTACACTGACAGGATTTTGCATATTTAACAGATTGTCCTCAGATaaaa                                                                              <  1:7532459/93‑1 (MQ=255)
           aTGAGAGCAGCTATATAAGAGATCAGCACAATTACGAACTCTTTATTACACTGACAGGATTTTACATATTTAACAGATTGTCCTCAGATaaaa                                                                              <  2:2882720/93‑1 (MQ=255)
           aTGAGAGCAGCTATATAAGAGATCAGCACAATTACGAACTCTTTATTACACTGACAGGATTTTACATATTTAACAGATTGTCCTCAGATaaaa                                                                              <  1:7886385/93‑1 (MQ=255)
           aTGAGAGCAGCTATATAAGAGATCAGCACAATTACGAACTCTTTATTACACTGACAGGATTTTACATATTTAACAGATTGTCCTCAGATaaaa                                                                              <  1:1090161/93‑1 (MQ=255)
            tGAGAGCAGCTATATAAGAGATCAGCACAATTACGAACTCTTTATTACACTGACAGGATTTTACATATTTAACAGATTGTCCTCAGATAAAAg                                                                             <  2:7404081/93‑1 (MQ=255)
            tGAGAGCAGCTATATAAGAGATCAGCACAATTACGAACTCTTTATTACACTGACAGGATTTTACATATTTAACAGATTGTCCTCAGATAAAAg                                                                             >  2:5918037/1‑93 (MQ=255)
            tGAGAGCAGCTATATAAGAGATCAGCACAATTACGAACTCTTTATTACACTGACAGGATTTTACATATTTAACAGATTGTCCTCAGATAAAAg                                                                             >  1:1789076/1‑93 (MQ=255)
               gagCAGCTATATAAGAGATCAGCACAATTACGAACTCTTTATTACACTGACAGGATTTTACATATTTAACAGATTGTCCTCAGATAAAAGGGc                                                                          >  1:981986/1‑93 (MQ=255)
               gagCAGCTATATAAGAGATCAGCACAATTACGAACTCTTTATTACACTGACAGGATTTTACATATTTAACAGATTGTCCTCAGATAAAAGGGc                                                                          >  2:2274075/1‑93 (MQ=255)
               gagCAGCTATATAAGAGATCAGCACAATTACGAACTCTTTATTACACTGACAGGATTTTACATATTTAACAGATTGTCCTCAGATAAAAGGGc                                                                          >  1:6865299/1‑93 (MQ=255)
               gagCAGCTATATAAGAGATCAGCACAATTACGAACTCTTTATTACACTGACAGGATTTTACATATTTAACAGATTGTCCTCAGATAAAAGGGc                                                                          <  1:287697/93‑1 (MQ=255)
               gagCAGCTATATAAGAGATCAGCACAATTACGAACTCTTTATTACACTGACAGGATTTTACATATTTAACAGATTGTCCTCAGATAAAAGGGc                                                                          >  1:3022598/1‑93 (MQ=255)
                 gcagcTATATAAGAGATCAGCACAATTACGAACTCTTTATTACACTGACAGGATTTTACATATTTAACAGATTGTCCTCAGATAAAAGGGCTg                                                                        >  1:2643101/1‑93 (MQ=255)
                    gcTATATAAGAGATCAGCACAATTACGAACTCTTTATTACACTGACAGGATTTTACATATTTAACAGATTGTCCTCAGATAAAAGGGCTGGaa                                                                     <  2:4028357/93‑1 (MQ=255)
                    gcTATATAAGAGATCAGCACAATTACGAACTCTTTATTACACTGACAGGATTTTACATATTTAACAGATTGTCCTCAGATAAAAGGGCTGGaa                                                                     <  1:3484556/93‑1 (MQ=255)
                      tatataAGAGATCAGCACAATTACGAACTCTTTATTACACTGACAGGATTTTACATATTTAACAGATTGTCCTCAGATAAAAGGGCTGGAATa                                                                   >  2:7599452/1‑93 (MQ=255)
                      tatataAGAGATCAGCACAATTACGAACTCTTTATTACACTGACAGGATTTTACATATTTAACAGATTGTCCTCAGATAAAAGGGCTGGAATa                                                                   >  2:4122797/1‑93 (MQ=255)
                      tatataAGAGATCAGCACAATTACGAACTCTTTATTACACTGACAGGATTTTACATATTCAACAGATTGTCCTCAGATAAAAGGGCTGGAATa                                                                   >  1:7632060/1‑93 (MQ=255)
                        tataAGAGATCAGCACAATTACGAACTCTTTATTACACTGACAGGATTTTACATATTTAACAGATTGTCCTCAGATAAAAGGGCTGGAATAcc                                                                 <  1:2407885/93‑1 (MQ=255)
                        tataAGAGATCAGCACAATTACGAACTCTTTATTACACTGACAGGATTTTACATATTTAACAGATTGTCCTCAGATAAAAGGGCTGGAATAcc                                                                 <  2:1554771/93‑1 (MQ=255)
                        tataAGAGATCAGCACAATTACGAACTCTTTATTACACTGACAGGATTTTACATATTTAACAGATTGTCCTCAGATAAAAGGGCTGGAATAcc                                                                 >  2:1072778/1‑93 (MQ=255)
                        tataAGAGATCAGCACAATTACGAACTCTTTATTACACTGACAGGATTTTACATATTTAACAGATTGTCCTCAGATAAAAGGGCTGGAATAcc                                                                 >  2:6123889/1‑93 (MQ=255)
                         ataAGAGATCAGCACAATTACGAACTCTTTATTACACTGACAGGATTTTACATATTTAACAGATTGTCCTCAGATAAAAGGGCTGGAATACCa                                                                <  2:2086648/93‑1 (MQ=255)
                         ataAGAGATCAGCACAATTACGAACTCTTTATTACACTGACAGGATTTTACATATTTAACAGATTGTCCTCAGATAAAAGGGCTGGAATACCa                                                                >  2:4580066/1‑93 (MQ=255)
                            agagATCAGCACAATTACGAACTCTTTATTACACTGACAGGATTTTACATATTTAACAGATTGTCCTCAGATAAAAGGGCTGGAATACCAGcc                                                             <  1:5786829/93‑1 (MQ=255)
                            agagATCAGCACAATTACGAACTCTTTATTACACTGACAGGATTTTACATATTTAACAGATTGTCCTCAGATAAAAGGGCTGGAATACCAGcc                                                             <  1:3818828/93‑1 (MQ=255)
                             gagaTCAGCACAATTACGAACTCTTTATTACACTGACAGGATTTTACATATTTAACAGATTGTCCTCAGATAAAAGGGCTGGAATACCAGccc                                                            >  1:2955289/1‑93 (MQ=255)
                               gaTCAGCACAATTACGAACTCTTTATTACACTGACAGGATTTTACATATTTAACAGATTGTCCTCAGATAAAAGGGCTGGAATACCAGCCCtt                                                          <  1:3071376/93‑1 (MQ=255)
                                 tCAGCACAATTACGAACTCTTTATTACACTGACAGGATTTTACATATTTAACAGATTGTCCTCAGATAAAAGGGCTGGAATACCAGCCCTTGt                                                        >  1:1033807/1‑93 (MQ=255)
                                  cAGCACAATTACGAACTCTTTATTACACTGACAGGATTTTACATATTTAACAGATTGTCCTCAGATAAACAGGCTGGAATACCAGCCCTTGtt                                                       >  2:3449707/1‑93 (MQ=255)
                                   aGCACAATTACGAACTCTTTATTACACTGACAGGATTTTACATATTTAACAGATTGTCCTCAGATAAAAGGGCTGGAATACCAGCCCTTGTTc                                                      >  1:5352254/1‑93 (MQ=255)
                                     cacaATTACGAACTCTTTATTACACTGACAGGATTTTACATATTTAACAGATTGTCCTCAGATAAAAGGGCTGGAATACCAGCCCTTGTTCgt                                                    >  1:79966/1‑93 (MQ=255)
                                      acaATTACGAACTCTTTATTACACTGACAGGATTTTACATATTTAACAGATTGTCCTCAGATAAAAGGGCTGGAATACCAGCCCTTGTTCgtg                                                   >  2:5539693/1‑93 (MQ=255)
                                      acaATTACGAACTCTTTATTACACTGACAGGATTTTACATATTTAACAGATTGTCCTCAGATAAAAGGGCTGGAATACCAGCCCTTGTTCgcg                                                   >  1:3652466/1‑91 (MQ=255)
                                       caATTACGAACTCTTTATTACACTGACAGGATTTTACATATTTAACAGATTGTCCTCAGATAAAAGGGCTGGAATACGAGCCCTTGTTCgtgt                                                  >  1:5524120/1‑93 (MQ=255)
                                       caATTACGAACTCTTTATTACACTGACAGGATTTTACATATTTAACAGATTGTCCTCAGATAAAAGGGCTGGAATACCAGCCCTTGTTCgtgt                                                  <  2:5349133/93‑1 (MQ=255)
                                        aaTTACGAACTCTTTATTACACTGACAGGATTTTACATATTTAACAGATTGTCCTCAGATAAAAGGGCTGGAATACCAGCCCTTGTTCGTGtt                                                 >  2:247234/1‑93 (MQ=255)
                                        aaTTACGAACTCTTTATTACACTGACAGGATTTTACATAGTTAACAGATTGTCCTCAGATAAAAGGGCTGGCATACCCGCCCGTGTGCGTGtt                                                 >  1:7087276/1‑93 (MQ=255)
                                         aTTACGAACTCTTTATTACACTGACAGGATTTTACATATTTAACAGATTGTCCTCAGATAAAAGGGCTGGAATACCAGCCCTTGTTCGTGTTa                                                >  1:4197943/1‑93 (MQ=255)
                                           tACGAACTCTTTATTACACTGACAGGATTTTACATATTTAACAGATTGTCCTCAGATAAAAGGGCTGGAATACCAGCCCTTGTTCGTGTTAAt                                              <  1:41026/93‑1 (MQ=255)
                                           tACGAACTCTTTATTACACTGACAGGATTTTACATATTTAACAGATTGTCCTCAGATAAAAGGGCTGGAATACCAGCCCTTGTTCGTGTTAAt                                              <  1:2751858/93‑1 (MQ=255)
                                              gAACTCTTTATTACACTGACAGGATTTTACATATTTAACAGATTGTCCTCAGATAAAAGGGCTGGAATACCAGCCCTTGTTCGTGTTAATccc                                           <  1:1865283/93‑1 (MQ=255)
                                              gAACTCTTTATTACACTGACAGGATTTTACATATTTAACAGATTGTCCTCAGATAAAAGGGCTGGAATACCAGCCCTTGTTCGTGTTAATccc                                           >  2:4828057/1‑93 (MQ=255)
                                               aaCTCTTTATTACACTGACAGGATTTTACATATTTAACAGATTGTCCTCAGATAAAAGGGCTGGAATACCAGCCCTTGTTCGTGTTAATCCCa                                          >  1:6259154/1‑93 (MQ=255)
                                               aaCTCTTTATTACACTGACAGGATTTTACATATTTAACAGATTGTCCTCAGATAAAAGGGCTGGAATACCAGCCCTTGTTCGTGTTAATCCCa                                          <  1:4926804/93‑1 (MQ=255)
                                                 ctctTTATTACACTGACAGGATTTTACATATTTAACAGATTGTCCTCAGATAAAAGGGCTGGAATACCAGCCCTTGTTCGTGTTAATCCCAGc                                        <  1:2565306/93‑1 (MQ=255)
                                                  tctTTATTACACTGACAGGATTTTACATATTTAACAGATTGTCCTCAGATAAAAGGGCTGGAATACCAGCCCTTGTTCGTGTTAATCCCAGCt                                       >  1:2074982/1‑93 (MQ=255)
                                                  tctTTATTACACTGACAGGATTTTACATATTTAACAGATTGTCCTCAGATAAAAGGGCTGGAATACCAGCCCTTGTTCGTGTTAATCCCAGCt                                       <  2:6591502/93‑1 (MQ=255)
                                                  tctTTATTACACTGACAGGATTTTACATATTTAACAGATTGTCCTCAGATAAAAGGGCTGGAATACCAGCCCTTGTTCGTGTTAATCCCAGCt                                       >  2:811772/1‑93 (MQ=255)
                                                  tctTTATTACACTGACAGGATTTTACATATTTAACAGATTGTCCTCAGATAAAAGGGCTGGAATACCAGCCCTTGTTCGTGTTAATCCCAGCt                                       >  1:3252374/1‑93 (MQ=255)
                                                   ctTTATTACACTGACAGGATTTTACATATTTCACAGATTGTCCTCAGATAAAAGGGCTGGAATACCAGCCCTTGTTCGTGTTAATCCCAGCTc                                      >  1:4254779/1‑93 (MQ=255)
                                                   ctTTATTACACTGACAGGATTTTACATATTTAACAGATTGTCCTCAGATAAAAGGGCTGGAATACCAGCCCTTGTTCGTGTTAATCCCAGCTc                                      >  2:2111510/1‑93 (MQ=255)
                                                   ctTTATTACACTGACAGGATTTTACATATTTAACAGATTGTCCTCAGATAAAAGGGCTGGAATACCAGCCCTTGTTCGTGTTAATCCCAGCTc                                      <  2:5230747/93‑1 (MQ=255)
                                                    tttATTACACTGACAGGATTTTACATATTTAACAGATTGTCCTCAGATAAAAGGGCTGGAATACCAGCCCTTGTTCGTGTTAATCCCAGCTCa                                     >  2:2933564/1‑93 (MQ=255)
                                                    tttATTACACTGACAGGATTTTACATATTTAACAGATTGTCCTCAGATAAAAGGGCTGGAATACCAGCCCTTGTTCGTGTTAATCCCAGCTCa                                     >  1:5960117/1‑93 (MQ=255)
                                                    tttATTACACTGACAGGATTTTACATATTTAACAGATTGTCCTCAGATAAAAGGGCTGGAATACCAGCCCTTGTTCGTGTTAATCCCAGCTCa                                     >  2:7489636/1‑93 (MQ=255)
                                                    tttATTACACTGACAGGATTTTACATATTTAACAGATTGTCCTCAGATAAAAGGGCTGGAATACCAGCCCTTGTTCGTGTTAATCCCAGCTCa                                     <  2:3497378/93‑1 (MQ=255)
                                                    tttATTACACTGACAGGATTTTACATATTTAACAGATTGTCCTCAGATAAAAGGGCTGGAATACCAGCCCTTGTTCGTGTTAATCCCAGCTCa                                     >  2:6676681/1‑93 (MQ=255)
                                                     ttattaCACTGACAGGATTTTACATATTTAACAGATTGTCCTCAGATAAAAGGGCTGGAATACCAGCCCTTGTTCGTGTTAATCCCAGCTCAg                                    >  2:5999090/1‑93 (MQ=255)
                                                       attaCACTGACAGGATTTTACATATTTAACAGATTGTCCTCAGATAAAAGGGCTGGAATACCAGCCCTTGTTCGTGTTAATCCCAGCTCAGaa                                  <  1:6651354/93‑1 (MQ=255)
                                                        ttaCACTGACAGGATTTTACATATTTAACAGATTGTCCTCAGATAAAAGGGCTGGAATACCAGCCCTTGTTCGTGTTAATCCCAGCTCAGAAt                                 <  2:5030637/93‑1 (MQ=255)
                                                          acacTGACAGGATTTTACATATTTAACAGATTGTCCTCAGATAAAAGGGCTGGAATACCAGCCCTTGTTCGTGTTAATCCCAGCTCAGAATaa                               >  2:4719331/1‑93 (MQ=255)
                                                           cacTGACAGGATTTTACATATTTAACAGATTGTCCTCAGATAAAAGGGCTGGAATACCAGCCCTTGTTCGTGTTAATCCCAGCTCAGAATAAc                              <  1:5800796/93‑1 (MQ=255)
                                                           cacTGACAGGATTTTACATATTTAACAGATTGTCCTCAGATAAAAGGGCTGGAATACCAGCCCTTGTTCGTGTTAATCCCAGCTCAGAATAAc                              >  2:6349147/1‑93 (MQ=255)
                                                            acTGACAGGATTTTACATATTTAACAGATTGTCCTCAGATAAAAGGGCTGGAATACCAGCCCTTGTTCGTGTTAATCCCAGCTCAGAATAACt                             >  2:2997430/1‑93 (MQ=255)
                                                            acTGACAGGATTTTACATATTTAACAGATTGTCCTCAGATAAAAGGGCTGGAATACCAGCCCTTGTTCGTGTTAATCCCAGCTCAGAATAACt                             >  2:1836597/1‑93 (MQ=255)
                                                            acTGACAGGATTTTACATATTTAACAGATTGTCCTCAGATAAAAGGGCTGGAATACCAGCCCTTGTTCGTGTTAATCCCAGCTCAGAATAACt                             <  2:1389273/93‑1 (MQ=255)
                                                              tGACAGGATTTTACATATTTAACAGATTGTCCTCAGATAAAAGGGCTGGAATACCAGCCCTTGTTCGTGTTAATCCCAGCTCAGAATAACttt                           >  1:4448759/1‑93 (MQ=255)
                                                              tGACAGGATTTTACATATTTAACAGATTGTCCTCAGATAAAAGGGCTGGAATACCAGCCCTTGTTCGTGTTAATCCCAGCTCAGAATAACttt                           >  2:4961107/1‑93 (MQ=255)
                                                              tGACAGGATTTTACATATTTAACAGATTGTCCTCAGATAAAAGGGCTGGAATACCAGCCCTTGTTCGTGTTAATCCCAGCTCAGAATAACttt                           >  2:1149954/1‑93 (MQ=255)
                                                               gACAGGATTTTACATATTTAACAGATTGTCCTCAGATAAAAGGGCTGGAATACCAGCCCTTGTTCGTGTTAATCCCAGCTCAGAATAACTTTc                          <  1:4026903/93‑1 (MQ=255)
                                                                aCAGGATTTTACATATTTAACAGATTGTCCTCAGATAAAAGGGCTGGAATACCAGCCCTTGTTCGTGTTAATCCCAGCTCAGAATAACTTTcc                         <  2:2627321/93‑1 (MQ=255)
                                                                aCAGGATTTTACATATTTAACAGATTGTCCTCAGATAAAAGGGCTGGAATACCAGCCCTTGTTCGTGTTAATCCCAGCTCAGAATAACTTTcc                         <  2:7843823/93‑1 (MQ=255)
                                                                  aGGATTTTACATATTTAACAGATTGTCCTCAGATAAAAGGGCTGGAATACCAGCCCTTGTTCGTGTTAATCCCAGCTCAGAATAACTTTCCCg                       >  2:6218368/1‑93 (MQ=255)
                                                                  aGGATTTTACATATTTAACAGATTGTCCTCAGATAAAAGGGCTGGAATACCAGCCCTTGTTCGTGTTAATCCCAGCTCAGAATAACTTTCCCg                       <  2:7313661/93‑1 (MQ=255)
                                                                     aTTTTACATATTTAACAGATTGTCCTCAGATAAAAGGGCTGGAATACCAGCCCTTGTTCGTGTTAATCCCAGCTCAGAATAACTTTCCCGGAc                    <  1:2150279/93‑1 (MQ=255)
                                                                     aTTTTACATATTTAACAGATTGTCCTCAGATAAAAGGGCTGGAATACCAGCCCTTGTTCGTGTTAATCCCAGCTCAGAATAACTTTCCCGGAc                    >  1:3140662/1‑93 (MQ=255)
                                                                      ttttACATATTTAACAGATTGTCCTCAGATAAAAGGGCTGGAATACCAGCCCTTGTTCGTGTTAATCCCAGCTCAGAATAACTTTCCCGGACt                   <  2:7176070/93‑1 (MQ=255)
                                                                         tACATATTTAACAGATTGTCCTCAGATAAAAGGGCTGGAATACCAGCCCTTGTTCGTGTTAATCCCAGCTCAGAATAACTTTCCCGGACTGGc                <  1:6462930/93‑1 (MQ=255)
                                                                         tACATATTTAACAGATTGTCCTCAGATAAAAGGGCTGGAATACCAGCCCTTGTTCGTGTTAATCCCAGCTCAGAATAACTTTCCCGGACTGGc                <  2:3325760/93‑1 (MQ=255)
                                                                         tACATATTTAACAGATTGTCCTCAGATAAAAGGGCTGGAATACCAGCCCTTGTTCGTGTTAATCCCAGCTCAGAATAACTTTCCCGGACTGGc                <  2:6440781/93‑1 (MQ=255)
                                                                          tcATATTTAACAGATTGTCCTCAGATAAAAGGGCTGGAATACCAGCCCTCGTTCGTGTTAATCCCAGCTCAGAATAACTTTCCCGGACTGGcc               <  1:5931162/92‑1 (MQ=255)
                                                                          aCATATTTAACAGATTGTCCTCAGATAAAAGGGCTGGAATACCAGCCCTTGTTCGTGTTAATCCCAGCTCAGAATAACTTTCCCGGACTGGcc               <  2:3938819/93‑1 (MQ=255)
                                                                              atTTAACAGATTGTCCTCAGATAAAAGGGCTGGAATACCAGCCCTTGTTCGTGTTAATCCCAGCTCAGAATAACTTTCCCGGACTGGCCCGaa           <  1:7281705/93‑1 (MQ=255)
                                                                               tttAACAGATTGTCCTCAGATAAAAGGGCTGGAATACCAGCCCTTGTTCGTGTTAATCCCAGCTCAGAATAACTTTCCCGGACTGGCCCGAAc          >  1:6074555/1‑93 (MQ=255)
                                                                                   aCAGATTGTCCTCAGATAAAAGGGCTGGAATACCAGCCCTTGTTCGTGTTAATCCCAGCTCAGAATAACTTTCCCGGACTGGCCCGAACGCAt      >  1:4345183/1‑93 (MQ=255)
                                                                                    cAGATTGTCCTCAGATAAAAGGGCTGGAATACCAGCCCTTGTTCGTGTTAATCCCAGCTCAGAATAACTTTCCCGGACTGGCCCGAACGCaca     >  1:6368637/1‑91 (MQ=255)
                                                                                     aGATTGTCCTCAGATAAAAGGGCTGGAATACCAGCCCTTGTTCGTGTTAATCCCAGCTCAGAATAACTTTCCCGGACTGGCCCGAACGCATAg    >  2:385843/1‑93 (MQ=255)
                                                                                      gATTGTCCTCAGATAAAAGGGCTGGAATACCAGCCCTTGTTCGTGTTAATCCCAGCTCAGAATAACTTTCCCGGACTGGCCCGAACGCATAGc   <  2:4458052/93‑1 (MQ=255)
                                                                                       aTTGTCCTCAGATAAAAGGGCTGGAATACCAGCCCTTGTTCGTGTTAATCCCAGCTCAGAATAACTTTCCCGGACTGGCCCGAACGCATAGCg  >  2:540011/1‑93 (MQ=255)
                                                                                          |                                                                                         
GTAGAGAGATAATGAGAGCAGCTATATAAGAGATCAGCACAATTACGAACTCTTTATTACACTGACAGGATTTTACATATTTAACAGATTATCCTCAGATAAAAGGGCTGGAATACCAGCCCTTGTTCGTGTTAATCCCAGCTCAGAATAACTTTCCCGGACTGGCCCGAACGCATAGCG  >  NC_000913/3787816‑3787995

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 

GATK/CNVnator alignment

BRESEQ :: bam2aln output Only 200 of 236 total aligned reads displayed.
AGGGTAGAGAGATAATGAGAGCAGCTATATAAGAGATCAGCACAATTACGAACTCTTTATTACACTGACAGGATTTTACATATTTAACAGATTATCCTCAGATAAAAGGGCTGGAATACCAGCCCTTGTTCGTGTTAATCCCAGCTCAGAATAACTTTCCCGGACTGGCCCGAACGCATAGCGTCAA  >  NC_000913/3787813‑3787999
                                                                                             |                                                                                             
AGGGTAGAGAGATAATGAGAGCAGCTATATAAGAGATCAGCACAATTACGAACTCTTTATTACACTGACAGGATTTTACATATTTAACAGATTG                                                                                               <  SRR4302543.4966275/94‑1 (MQ=60)
 GGGTAGAGAGATAATGAGAGCAGCTATATAAGAGATCAGCACAATTACGAACTCTTTATTACACTGACAGGATTTTACATATTTAACAGATTGT                                                                                              >  SRR4302543.2969826/1‑94 (MQ=60)
 GGGTAGAGAGATAATGAGAGCAGCTATATAAGAGATCAGCACAATTACGAACTCTTTATTACACTGACAGGATTTTACATATTTAACAGATTGT                                                                                              <  SRR4302543.1946030/94‑1 (MQ=60)
  GGTAGAGAGATAATGAGAGCAGCTATATAAGAGATCAGCACAATTACGAACTCTTTATTACACTGACAGGATTTTACATATTTAACAGATTGTC                                                                                             >  SRR4302543.806944/1‑94 (MQ=60)
     AGAGAGATAATGAGAGCAGCTATATAAGAGATCAGCACAATTACGAACTCTTTATTACACTGACAGGATTTTACATATTTAACAGATTGTCCTC                                                                                          <  SRR4302543.6101423/94‑1 (MQ=60)
     AGAGAGATAATGAGAGCAGCTATATAAGAGATCAGCACAATTACGAACTCTTTATTACACTGACAGGATTTTACATATTTAACAGATTGTCCTC                                                                                          <  SRR4302543.2520080/94‑1 (MQ=60)
       AGAGATAATGAGAGCAGCTATATAAGAGATCAGCACAATTACGAACTCTTTATTACACTGACAGGATTTTACATATTTAACAGATTGTCCTCAG                                                                                        <  SRR4302543.4569500/94‑1 (MQ=60)
       AGAGATAATGAGAGCAGCTATATAAGAGATCAGCACAATTACGAACTCTTTATTACACTGACAGGATTTTACATATTTAACAGATTGTCCTCAG                                                                                        <  SRR4302543.2001186/94‑1 (MQ=60)
       AGAGATAATGAGAGCAGCTATATAAGAGATCAGCACAATTACGAACTCTTTATTACACTGACAGGATTTTACATATTTAACAGATTGTCCTCAG                                                                                        <  SRR4302543.7399927/94‑1 (MQ=60)
       AGAGATAATGAGAGCAGCTATATAAGAGATCAGCACAATTACGAACTCTTTATTACACTGACAGGATTTTACATATTTAACAGATTGTCCTCAG                                                                                        <  SRR4302543.7384990/94‑1 (MQ=60)
        GAGATAATGAGAGCAGCTATATAAGAGATCAGCACAATTACGAACTCTTTATTACACTGACAGGATTTTACATATTTAACAGATTGTCCTCAGA                                                                                       >  SRR4302543.725006/1‑94 (MQ=60)
         AGATAATGAGAGCAGCTATATAAGAGATCAGCACAATTACGAACTCTTTATTACACTGACAGGATTTTACATATTTAACAGATTGTCCTCAGAT                                                                                      <  SRR4302543.7712691/94‑1 (MQ=60)
         AGATAATGAGAGCAGCTATATAAGAGATCAGCACAATTACGAACTCTTTATTACACTGACAGGATTTTACATATTTAACAGATTGTCCTCAGAT                                                                                      >  SRR4302543.1356542/1‑94 (MQ=60)
          GATAATGAGAGCAGCTATATAAGAGATCAGCACAATTACGAACTCTTTATTACACTGACAGGATTTTACATATTTAACAGATTGTCCTCAGATA                                                                                     >  SRR4302543.5038953/1‑94 (MQ=60)
          GATAATGAGAGCAGCTATATAAGAGATCAGCACAATTACGAACTCTTTATTACACTGACAGGATTTTACATATTTAACAGATTGTCCTCAGATA                                                                                     <  SRR4302543.2451135/94‑1 (MQ=60)
           ATAATGAGAGCAGCTATATAAGAGATCAGCACAATTACGAACTCTTTATTACACTGACAGGATTTTACATATTTAACAGATTGTCCTCAGATAA                                                                                    <  SRR4302543.4487872/94‑1 (MQ=60)
           ATAATGAGAGCAGCTATATAAGAGATCAGCACAATTACGAACTCTTTATTACACTGACAGGATTTTACATATTTAACAGATTGTCCTCAGATAA                                                                                    >  SRR4302543.2741189/1‑94 (MQ=60)
           ATAATGAGAGCAGCTATATAAGAGATCAGCACAATTACGAACTCTTTATTACACTGACAGGATTTTACATATTTAACAGATTGTCCTCAGATAA                                                                                    <  SRR4302543.7728183/94‑1 (MQ=60)
            TAATGAGAGCAGCTATATAAGAGATCAGCACAATTACGAACTCTTTATTACACTGACAGGATTTTACATATTTAACAGATTGTCCTCAGATAAA                                                                                   <  SRR4302543.4116651/94‑1 (MQ=60)
             AATGAGAGCAGCTATATAAGAGATCAGCACAATTACGAACTCTTTATTACACTGACAGGATTTTACATATTTAACAGATTGTCCTCAGATAAAA                                                                                  <  SRR4302543.2904728/94‑1 (MQ=60)
             AATGAGAGCAGCTATATAAGAGATCAGCACAATTACGAACTCTTTATTACACTGACAGGATTTTACATATTTAACAGATTGTCCTCAGATAAAA                                                                                  <  SRR4302543.4889847/94‑1 (MQ=60)
              ATGAGAGCAGCTATATAAGAGATCAGCACAATTACGAACTCTTTATTACACTGACAGGATTTTGCATATTTAACAGATTGTCCTCAGATAAAAG                                                                                 <  SRR4302543.7604289/94‑1 (MQ=60)
              ATGAGAGCAGCTATATAAGAGATCAGCACAATTACGAACTCTTTATTACACTGACAGGATTTTACATATTTAACAGATTGTCCTCAGATAAAAG                                                                                 <  SRR4302543.525749/94‑1 (MQ=60)
              ATGAGAGCAGCTATATAAGAGATCAGCACAATTACGAACTCTTTATTACACTGACAGGATTTTACATATTTAACAGATTGTCCTCAGATAAAAG                                                                                 >  SRR4302543.1805087/1‑94 (MQ=60)
              ATGAGAGCAGCTATATAAGAGATCAGCACAATTACGAACTCTTTATTACACTGACAGGATTTTACATATTTAACAGATTGTCCTCAGATAAAAG                                                                                 <  SRR4302543.1099959/94‑1 (MQ=60)
              ATGAGAGCAGCTATATAAGAGATCAGCACAATTACGAACTCTTTATTACACTGACAGGATTTTACATATTTAACAGATTGTCCTCAGATAAAAG                                                                                 <  SRR4302543.7960576/94‑1 (MQ=60)
              ATGAGAGCAGCTATATAAGAGAACAGCACAATTACGAACTCTTTATTACACTGACAGGATTTTACATATTTAACAGATTGTCCTCAGATAAAAG                                                                                 <  SRR4302543.231509/94‑1 (MQ=60)
               TGAGAGCAGCTATATAAGAGATCAGCACAATTACGAACTCTTTATTACACTGACAGGATTTTACATATTTACCAGATTGTCCTCAGATAAAAGG                                                                                <  SRR4302543.428475/94‑1 (MQ=60)
                GAGAGCAGCTATATAAGAGATCAGCACAATTACGAACTCTTTATTACACTGACAGGATTTTACATATTTAACAGATTGTCCTCAGATAAAAGGG                                                                               <  SRR4302543.817465/94‑1 (MQ=60)
                 AGAGCAGCTATATAAGAGATCAGCACAATTACGAACTCTTTATTACACTGACAGGATTTTACATATTTAACAGATTGTCCTCAGATAAAAGGGC                                                                              >  SRR4302543.1868968/1‑94 (MQ=60)
                 AGAGCAGCTATATAAGAGATCAGCACAATTACGAACTCTTTATTACACTGACAGGATTTTACATATTTAACAGATTGTCCTCAGATAAAAGGGC                                                                              >  SRR4302543.3049922/1‑94 (MQ=60)
                 AGAGCAGCTATATAAGAGATCAGCACAATTACGAACTCTTTATTACACTGACAGGATTTTACATATTTAACAGATTGTCCTCAGATAAAAGGGC                                                                              >  SRR4302543.369819/1‑94 (MQ=60)
                 AGAGCAGCTATATAAGAGATCAGCACAATTACGAACTCTTTATTACACTGACAGGATTTTACATATTTAACAGATTGTCCTCAGATAAAAGGGC                                                                              >  SRR4302543.369824/1‑94 (MQ=60)
                 AGAGCAGCTATATAAGAGATCAGCACAATTACGAACTCTTTATTACACTGACAGGATTTTACATATTTAACAGATTGTCCTCAGATAAAAGGGC                                                                              >  SRR4302543.6929981/1‑94 (MQ=60)
                  GAGCAGCTATATAAGAGATCAGCACAATTACGAACTCTTTATTACACTGACAGGATTTTACATATTTAACAGATTGTCCTCAGATAAAAGGGCT                                                                             <  SRR4302543.290265/94‑1 (MQ=60)
                  GAGCAGCTATATAAGAGATCAGCACAATTACGAACTCTTTATTACACTGACAGGATTTTACATATTTAACAGATTATCCTCAGATAAAAGGGCT                                                                             <  SRR4302543.2047855/94‑1 (MQ=60)
                  GAGCAGCTATATAAGAGATCAGCACAATTACGAACTCTTTATTACACAGACAGGATTTTACATATTTAACAGATTGTCCTCAGATAAAAGGGCT                                                                             <  SRR4302543.6373135/94‑1 (MQ=60)
                   AGCAGCTATATAAGAGATCAGCACAATTACGAACTCTTTATTACACTGACAGGATTTTACATATTTAACAGATTGTCCTCAGATAAAAGGGCTG                                                                            >  SRR4302543.2667039/1‑94 (MQ=60)
                   AGCAGCTATATAAGAGATCAGCACAATTACGAACTCTTTATTACACTGACAGGATTTTACATATTTAACAGATTGTCCTCAGATAAAAGGGCTG                                                                            >  SRR4302543.957401/1‑94 (MQ=60)
                   AGCAGCTATATAAGAGATCAGCACAATTACGAACTCTTTATTACACTGACAGGATTTTACATATTTAACAGATTGTCCTCAGATAAAAGGGCTG                                                                            >  SRR4302543.957399/1‑94 (MQ=60)
                    GCAGCTATATAAGAGATCAGCACAATTACGAACTCTTTATTACACTGACAGGATTTTACATATTTAACAGATTGTCCTCAGATAAAAGGGCTGG                                                                           <  SRR4302543.7884759/94‑1 (MQ=60)
                    GCAGCTATATAAGAGATCAGCACAATTACGAACTCTTTATTACACTGACAGGATTTTACATATTTAACAGATTGTCCTCAGATAAAAGGGCTGG                                                                           <  SRR4302543.294401/94‑1 (MQ=60)
                    GCAGCTATATAAGAGATCAGCACAATTACGAACTCTTTATACACTGACAGGATTTTACATATTTAACAGATTGTCCTCAGATAAAAGGGCTGGA                                                                          >  SRR4302543.4661246/1‑94 (MQ=60)
                     CAGCTATATAAGAGATCAGCACAATTACGAACTCTTTATTACACTGACAGGATTTTACATATTTAACAGATTGTCCTCAGATAAAAGGGCTGGA                                                                          >  SRR4302543.4294195/1‑94 (MQ=60)
                      AGCTATATAAGAGATCAGCACAATTACGAACTCTTTATTACACTGACAGGATTTTACATATTTAACAGATTGTCCTCAGATAAAAGGGCTGGAA                                                                         >  SRR4302543.65452/1‑94 (MQ=60)
                      AGCTATATAAGAGATCAGCACAATTACGAACTCTTTATTACACTGACAGGATTTTACATATTTAACAGATTGTCCTCAGATAAAAGGGCTGGAA                                                                         >  SRR4302543.7006142/1‑94 (MQ=60)
                       GCTATATAAGAGATCAGCACAATTACGAACTCTTTATTACACTGACAGGATTTTACATATTTAACAGATTGTCCTCAGATAAAAGGGCTGGAAT                                                                        <  SRR4302543.3515763/94‑1 (MQ=60)
                        CTATATAAGAGATCAGCACAATTACGAACTCTTTATTACACTGACAGGATTTTACATATTTAACAGATTGTCCTCAGATAAAAGGGCTGGAATA                                                                       >  SRR4302543.4135750/1‑94 (MQ=60)
                        CTATATAAGAGATCAGCACAATTACGAACTCTTTATTACACTGACAGGATTTTACATATTTAACAGATTGTCCTCAGATAAAAGGGCTGGAATA                                                                       >  SRR4302543.123490/1‑94 (MQ=60)
                        CTATATAAGAGATCAGCACAATTACGAACTCTTTATTACACTGACAGGATTTTACATATTTAACAGATTGTCCTCAGATAAAAGGGCTGGAATA                                                                       >  SRR4302543.7628618/1‑94 (MQ=60)
                        CTATATAAGAGATCAGCACAATTACGAACTCTTTATTACACTGACAGGATTTTACATATTTAACAGATTGTCCTCAGATAAAAGGGCTGGAATA                                                                       <  SRR4302543.6758680/94‑1 (MQ=60)
                          ATATAAGAGATCAGCACAATTACGAACTCTTTATTACACTGACAGGATTTTACATATTTAACAGATTGTCCTCAGATGAGAGGGCTGGAATAgt                                                                     >  SRR4302543.1449638/1‑92 (MQ=60)
                          ATATAAGAGATCAGCACAATTACGAACTCTTTATTACACTGACAGGATTTTACATATTTAACAGATTGTCCTCAGATAAAAGGGCTGGAATACC                                                                     >  SRR4302543.708064/1‑94 (MQ=60)
                           TATAAGAGATCAGCACAATTACGAACTCTTTATTACACTGACAGGATTTTACATATTTAACAGATTGTCCTCAGATAAAAGGGCTGGAATACCA                                                                    >  SRR4302543.1781685/1‑94 (MQ=60)
                           TATAAGAGATCAGCACAATTACGAACTCTTTATTACACTGACAGGATTTTACATATTTAACAGATTGTCCTCAGATAAAAGGGCTGGAATACCA                                                                    <  SRR4302543.2429651/94‑1 (MQ=60)
                            ATAAGAGATCAGCACAATTACGAACTCTTTATTACACTGACAGGATTTTACATATTTATCAGATTGTCCTCAGATAAAAGGGCTGGAATACCAG                                                                   >  SRR4302543.5850495/1‑94 (MQ=60)
                            ATAAGAGATCAGCACAATTACGAACTCTTTATTACACTGACAGGATTTTACATATTTAACAGATTGTCCTCAGATAAAAGGGCTGGAATACCAG                                                                   <  SRR4302543.4425593/94‑1 (MQ=60)
                            ATAAGAGATCAGCACAATTACGAACTCTTTATTACACTGACAGGATTTTACATATTTAACAGATTGTCCTCAGATAAAAGGGCTGGAATACCAC                                                                   >  SRR4302543.5677058/1‑94 (MQ=60)
                              AAGAGATCAGCACAATTACGAACTCTTTATTACACTGACAGGATTTTACATATTTAACAGATTGTCCTCAGATAAAAGGGCTGGAATACCAGCC                                                                 <  SRR4302543.300974/94‑1 (MQ=60)
                               AGAGATCAGCACAATTACGAACTCTTTATTACACTGACAGGATTTTACATATTTAACAGATTGTCCTCAGATAAAAGGGCTGGAATACCAGCCC                                                                <  SRR4302543.7447029/94‑1 (MQ=60)
                               AGAGATCAGCACAATTACGAACTCTTTATTACACTGACAGGATTTTACATATTTAACAGATTGTCCTCAGATAAAAGGGCTGGAATACCAGCCC                                                                <  SRR4302543.3852504/94‑1 (MQ=60)
                               AGAGATCAGCACAATTACGAACTCTTTATTACACTGACAGGATTTTACATATTTAACAGATTGTCCTCAGATAAAAGGGCTGGAATACCAGCCC                                                                >  SRR4302543.2982120/1‑94 (MQ=60)
                               AGAGATCAGCACAATTACGAACTCTTTATTACACTGACAGGATTTTACATATTTAACAGATTGTCCTCAGATAAAAGGGCTGGAATACCAGCCC                                                                <  SRR4302543.6378183/94‑1 (MQ=60)
                               AGAGATCAGCACAATTACGAACTCTTTATTACACTGACAGGATTTTACATATTTAACAGATTGTCCTCAGATAAAAGGGCTGGAATACCAGCCC                                                                <  SRR4302543.5839483/94‑1 (MQ=60)
                                GAGATCAGCACAATTACGAACTCTTTATTACACTGACAGGATTTTACATATTTAACAGATTGTCCTCAGATAAAAGGGCTGGAATACCAGCCCT                                                               <  SRR4302543.3484427/94‑1 (MQ=60)
                                 AGATCAGCACAATTACGAACTCTTTATTACACTGACAGGATTTTACATATTTAACAGATTGTCCTCAGATAAAAGGGCTGGAATACCAGCCCTT                                                              >  SRR4302543.1342068/1‑94 (MQ=60)
                                  GATCAGCACAATTACGAACTCTTTATTACACTGACAGGATTTTACATATTTAACAGATTGTCCTCAGATAAAAGGGCTGGAATACCAGCCCTTG                                                             <  SRR4302543.3098995/94‑1 (MQ=60)
                                   ATCAGCACAATTACGAACTCTTTATTACACTGACAGGATTTTACATATTTAACAGATTGTCCTCAGATAAAAGGGCTGGAATACCAGCCCTTGT                                                            >  SRR4302543.1042986/1‑94 (MQ=60)
                                   ATCAGCACAATTACGAACTCTTTATTACACTGACAGGATTTTACATATTTAACAGATTGTCCTCAGATAAAAGGGCTGGAATACCAGCCCTTGT                                                            >  SRR4302543.6589877/1‑94 (MQ=60)
                                   ATCAGCACAATTACGAACTCTTTATTACACTGACAGGATTTTACATATTTAACAGATTGTCCTCAGATAAAAGGGCTGGAATACCAGCCCTTGT                                                            >  SRR4302543.6849160/1‑94 (MQ=60)
                                   ATCAGCACAATTACGAACTCTTTATTACACTGACAGGATTTTACATATTTAACAGATTGTCCTCAGATAAAAGGGCTGGAATACCAGCCCTTGT                                                            >  SRR4302543.4327811/1‑94 (MQ=60)
                                    TCAGCACAATTACGAACTCTTTATTACACTGACAGGATTTTACATATTTAACAGATTGTCCTCAGATAAAAGGGCTGGAATACCAGCCCTTGTT                                                           <  SRR4302543.3594491/94‑1 (MQ=60)
                                    TCAGCACAATTACGAACTCTTTATTACACTGACAGGATTTTACATATTTAACAGATTGTCCTCAGATAAAAGGGCTGGAATACCAGCCCTTGTT                                                           <  SRR4302543.6553352/94‑1 (MQ=60)
                                     CAGCACAATTACGAACTCTTTATTACACTGACAGGATTTTACATATTTAACAGATTGTCCTCAGATAAAAGGGCTGGAATACCAGCCCTTGTTC                                                          >  SRR4302543.5400694/1‑94 (MQ=60)
                                      AGCACAATTACGAACTCTTTATTACACTGACAGGATTTTACATATTTAACAGATTGTCCTCAGATAAAAGGGCTGGAATACCAGCCCTTGTTCG                                                         <  SRR4302543.4977811/94‑1 (MQ=60)
                                      AGCACAATTACGAACTCTTTATTACACTGACAGGATTTTACATATTTAACAGATTGTCCTCAGATAAAAGGGCTGGAATACCAGCCCTTGTTCG                                                         >  SRR4302543.5943020/1‑94 (MQ=60)
                                      AGCACAATTACGAACTCTTTATTACACTGACAGGATTTTACATATTTAACAGATTGTCCTCAGATAAAAGGGCTGGAATACCAGCCCTTGTTCG                                                         >  SRR4302543.7329686/1‑94 (MQ=60)
                                       GCACAATTACGAACTCTTTATTACACTGACAGGATTTTACATATTTAACAGATTGTCCTCAGATAAAAGGGCTGGAATACCAGCCCTTGTTCGT                                                        >  SRR4302543.7614100/1‑94 (MQ=60)
                                       GCACAATTACGAACTCTTTATTACACTGACAGGATTTTACATATTTAACAGATTGTCCTCAGATAAAAGGGCTGGAATACCAGCCCTTGTTCGT                                                        >  SRR4302543.80708/1‑94 (MQ=60)
                                       GCACAATTACGAACTCTTTATTACACTGACAGGATTTTACATATTTAACAGATTGTCCTCAGATAAAAGGGCTGGAATACCAGCCCTTGTTCGT                                                        <  SRR4302543.2692419/94‑1 (MQ=60)
                                        CACAATTACGAACTCTTTATTACACTGACAGGATTTTACATATTTAACAGATTGTCCTCAGATAAAAGGGCTGGAATACCAGCCCTTGTTCGCG                                                       >  SRR4302543.3684552/1‑94 (MQ=60)
                                         ACAATTACGAACTCTTTATTACACTGACAGGATTTTACATATTTAACAGATTGTCCTCAGATAAAAGGGCTGGAATACGAGCCCTTGTTCGTGT                                                      >  SRR4302543.5574296/1‑94 (MQ=60)
                                         ACAATTACGAACTCTTTATTACACTGACAGGATTTTACATATTTAACAGATTGTCCTCAGATAAAAGGGCTGGAATACCAGCCCTTGTTCGTGT                                                      >  SRR4302543.5839817/1‑94 (MQ=60)
                                          CAATTACGAACTCTTTATTACACTGACAGGATTTTACATAGTTAACAGATTGTCCTCAGATAAAAGGGCTGGCATACCCGCCCGTGTGCGTGTT                                                     >  SRR4302543.7156104/1‑94 (MQ=60)
                                           AATTACGAACTCTTTATTACACTGACAGGATTTTACATATTTAACAGATTGTCCTCAGATAAAAGGGCTGGAATACCAGCCCTTGTTCGTGTTA                                                    >  SRR4302543.7322141/1‑94 (MQ=60)
                                           AATTACGAACTCTTTATTACACTGACAGGATTTTACATATTTAACAGATTGTCCTCAGATAAAAGGGCTGGAATACCAGCCCTTGTTCGTGTTA                                                    >  SRR4302543.4236002/1‑94 (MQ=60)
                                            ATTACGAACTCTTTATTACACTGACAGGATTTTACATATTTAACAGATTGTCCTCAGATAAAAGGGCTGGAATACCAGCCCTTGTTCGTGTTAA                                                   >  SRR4302543.1857100/1‑94 (MQ=60)
                                            ATTACGAACTCCTTATTACACTGACAGGATTTTACATATTTAACAGATTGTCCTCAGATAAAAGGGCTGGAATACCAGCCCTTGTTCGTGTTAA                                                   <  SRR4302543.6226446/94‑1 (MQ=60)
                                             TTACGAACTCTTTATTACACTGACAGGATTTTACATATTTAACAGATTGTCCTCAGATAAAAGGGCTGGAATACCAGCCCTTGTTCGTGTTAAT                                                  <  SRR4302543.2138869/94‑1 (MQ=60)
                                             TTACGAACTCTTTATTACACTGACAGGATTTTACATATTTAACAGATTGTCCTCAGATAAAAGGGCTGGAATACCAGCCCTTGTTCGTGTTAAT                                                  <  SRR4302543.3634673/94‑1 (MQ=60)
                                             TTACGAACTCTTTATTACACTGACAGGATTTTACATATTTAACAGATTGTCCTCAGATAAAAGGGCTGGAATACCAGCCCTTGTTCGTGTTAAT                                                  <  SRR4302543.1627209/94‑1 (MQ=60)
                                             TTACGAACTCTGTATTACACTGACAGGATTTTACATATTTAACAGATTGTCCTCAGATAAAAGGGCTGGAATACCAGCCCTTGTTCGTGTTAAT                                                  <  SRR4302543.18977/94‑1 (MQ=60)
                                              TACGAACTCTTTATTACACTGACAGGATTTTACATATTTAACAGATTGTCCTCAGATAAAAGGGCTGGAATACCAGCCCTTGTTCGTGTTAATC                                                 >  SRR4302543.6049460/1‑94 (MQ=60)
                                              TACGAACTCTTTATTACACTGACAGGATTTTACATATTTAACAGATTGTCCTCAGATAAAAGGGCTGGAATACCAGCCCTTGTTCGTGTTAATC                                                 <  SRR4302543.2776889/94‑1 (MQ=60)
                                              TACGAACTCTTTATTACACTGACAGGATTTTACATATTTAACAGATTGTCCTCAGATAAAAGGGCTGGAATACCAGCCCTTGTTCGTGTTAATC                                                 >  SRR4302543.6012188/1‑94 (MQ=60)
                                              TACGAACTCTTTATTACACTGACAGGATTTTACATATTTAACAGATTGTCCTCAGATAAAAGGGCTGGAATACCAGCCCTTGTTCGTGTTAATC                                                 <  SRR4302543.6271071/94‑1 (MQ=60)
                                              TACGAACTCTTTATTACACTGACAGGATTTTACATATTTAACAGATTGTCCTCAGATAAAAGGGCTGGAATACCAGCCCTTGTTCGTGTTAATC                                                 <  SRR4302543.41403/94‑1 (MQ=60)
                                               ACGAACTCTTTATTACACTGACAGGATTTTACATATTTAACAGATTGTCCTCAGATAAAAGGGCTGGAATACCAGCCCTTGTTCGTGTTAATCC                                                >  SRR4302543.4285417/1‑94 (MQ=60)
                                                CGAACTCTTTATTACACTGACAGGATTTTACATATTTAACAGATTGTCCTCAGATAAAAGGGCTGGAATACCAGCCCTTGTTCGTGTTAATCCC                                               >  SRR4302543.3374419/1‑94 (MQ=60)
                                                CGAACTCTTTATTACACTGACAGGATTTTACATATTTAACAGATTGTCCTCAGATAAAAGGGCTGGAATACCAGCCCTTGTTCGTGTTAATCCC                                               <  SRR4302543.3227146/94‑1 (MQ=60)
                                                CGAACTCTTTATTACACTGACAGGATTTTACATATTTAACAGATTGTCCTCAGATAAAAGGGCTGGAATACCAGCCCTTGTTCGTGTTAATCCC                                               >  SRR4302543.4013934/1‑94 (MQ=60)
                                                CGAACTCTTTATTACACTGACAGGATTTTACATATTTAACAGATTGTCCTCAGATAAAAGGGCTGGAATACCAGCCCTTGTTCGTGTTAATCCC                                               >  SRR4302543.297975/1‑94 (MQ=60)
                                                CGAACTCTTTATTACACTGACAGGATTTTACATATTTAACAGATTGTCCTCAGATAAAAGGGCTGGAATACCAGCCCTTGTTCGTGTTAATCCC                                               >  SRR4302543.7643060/1‑94 (MQ=60)
                                                 GACCTCTTTATTACACTGACAGGATTTTACATATTTAACAGATTGTCCTCAGATAAAAGGGCTGGAATACCAGCCCTTGTTCGTGTTAATCCCA                                              <  SRR4302543.421893/94‑1 (MQ=60)
                                                 GAACTCTTTATTACACTGACAGGATTTTACATATTTAACAGATTGTCCTCAGATAAAAGGGCTGGAATACCAGCCCTTGTTCGTGTTAATCCCA                                              >  SRR4302543.6318190/1‑94 (MQ=60)
                                                 GAACTCTTTATTACACTGACAGGATTTTACATATTTAACAGATTGTCCTCAGATAAAAGGGCTGGAATACCAGCCCTTGTTCGTGTTAATCCCA                                              <  SRR4302543.1882037/94‑1 (MQ=60)
                                                 GAACTCTTTATTACACTGACAGGATTTTACATATTTAACAGATTGTCCTCAGATAAAAGGGCTGGAATACCAGCCCTTGTTCGTGTTAATCCCA                                              >  SRR4302543.6208113/1‑94 (MQ=60)
                                                 GAACTCTTTATTACACTGACAGGATTTTACATATTTAACAGATTGTCCTCAGATAAAAGGGCTGGAATACCAGCCCTTGTTCGTGTTAATCCCA                                              >  SRR4302543.7889303/1‑94 (MQ=60)
                                                 GAACTCTTTATTACACTGACAGGATTTTACATATTTAACAGATTGTCCTCAGATAAAAGGGCTGGAATACCAGCCCTTGTTCGTGTTAATCCCA                                              >  SRR4302543.1161532/1‑94 (MQ=60)
                                                  ATCTCTTTATTACACTGACAGGATTTTACATATTTAACAGATTGTCCTCAGATAAAAGGGCTGGAATACCAGCCCTTGTTCGTGTTAATCCCAG                                             <  SRR4302543.4513915/94‑1 (MQ=60)
                                                  AGCTCTTTATTACACTGACAGGATTTTACATATTTAACAGATTGTCCTCAGATAAAAGGGCTGGAATACCAGCCCTTGTTCGTGTTAATCCCAG                                             <  SRR4302543.4513914/94‑1 (MQ=60)
                                                  AACTCTTTATTACACTGACAGGATTTTACATATTTAACAGATTGTCCTCAGATAAAAGGGTTGGAATACCAGCCCTTGTTCGTGTTAATCCCAG                                             >  SRR4302543.7703972/1‑94 (MQ=60)
                                                  AACTCTTTATTACACTGACAGGATTTTACATATTTAACAGATTGTCCTCAGATAAAAGGGCTGGAATACCAGCCCTTGTTCGTGTTAATCCCAG                                             >  SRR4302543.5809521/1‑94 (MQ=60)
                                                  AACTCTTTATTACACTGACAGGATTTTACATATTTAACAGATTGTCCTCAGATAAAAGGGCTGGAATACCAGCCCTTGTTCGTGTTAATCCCAG                                             <  SRR4302543.7976998/94‑1 (MQ=60)
                                                  AACTCTTTATTACACTGACAGGATTTTACATATTTAACAGATTGTCCTCAGATAAAAGGGCTGGAATACCAGCCCTTGTTCGTGTTAATCCCAG                                             <  SRR4302543.4971686/94‑1 (MQ=60)
                                                  AACTCTTTATTACACTGACAGGATTTTACATATTTAACAGATTGTCCTCAGATAAAAGGGCTGGAATACCAGCCCTTGTTCGTGTTAATCCCAC                                             >  SRR4302543.5463585/1‑94 (MQ=60)
                                                    CTCTTTATTACACTGACAGGATTTTACATATTTAACAGATTGTCCTCAGATAAAAGGGCTGGAATACCAGCCCTTGTTCGTGTTAATCCCAGCT                                           >  SRR4302543.5505136/1‑94 (MQ=60)
                                                    CTCTTTATTACACTGACAGGATTTTACATATTTAACAGATTGTCCTCAGATAAAAGGGCTGGAATACCAGCCCTTGTTCGTGTTAATCCCAGCT                                           <  SRR4302543.1835348/94‑1 (MQ=60)
                                                    CTCTTTATTACACTGACAGGATTTTACATATTTAACAGATTGTCCTCAGATAAAAGGGCTGGAATACCAGCCCTTGTTCGTGTTAATCCCAGCT                                           >  SRR4302543.3281776/1‑94 (MQ=60)
                                                    CTCTTTATTACACTGACAGGATTTTACATATTTAACAGATTGTCCTCAGATAAAAGGGCTGGAATACCAGCCCTTGTTCGTGTTAATCCCAGCT                                           >  SRR4302543.2599071/1‑94 (MQ=60)
                                                    CTCTTTATTACACTGACAGGATTTTACATATTTAACAGATTGTCCTCAGATAAAAGGGCTGGAATACCAGCCCTTGTTCGTGTTAATCCCAGCT                                           >  SRR4302543.2093518/1‑94 (MQ=60)
                                                    CTCTTTATTACACTGACAGGATTTTACATATTTAACAGATTGTCCTCAGATAAAAGGGCTGGAATACCAGCCCTTGTTCGTGTTAATCCCAGCT                                           <  SRR4302543.2588741/94‑1 (MQ=60)
                                                    CTCTTTATTACACTGACAGGATTTTACATATTTAACAGATTGTCCTCAGATAAAAGGGCTGGAATACCAGCCCTTGTTCGTGTTAATCCCAGCT                                           >  SRR4302543.3107435/1‑94 (MQ=60)
                                                     TCTTTATTACACTGACAGGATTTTACATATTTCACAGATTGTCCTCAGATAAAAGGGCTGGAATACCAGCCCTTGTTCGTGTTAATCCCAGCTC                                          >  SRR4302543.4293403/1‑94 (MQ=60)
                                                      CTTTATTACACTGACAGGATTTTACATATTTAACAGATTGTCCTCAGATAAAAGGGCTGGAATACCAGCCCTTGTTCGTGTTAATCCCAGCTCA                                         >  SRR4302543.6014681/1‑94 (MQ=60)
                                                      CTTTATTACACTGACAGGATTTTACATATTTAACAGATTGTCCTCAGATAAAAGGGCTGGAATACCAGCCCTTGTTCGTGTTAATCCCACCTCA                                         >  SRR4302543.6014680/1‑94 (MQ=60)
                                                       TTTATTACACTGACAGGATTTTACATATTTAACAGATTGTCCTCAGATAAAAGGGCTGGAATACCAGCCCTTGTTCGTGTTAATCCCAGCTCAG                                        >  SRR4302543.4147616/1‑94 (MQ=60)
                                                       TTTATTACACTGACAGGATTTTACATATTTAACAGATTGTCCTCAGATAAAAGGGCTGGAATACCAGCCCTTGTTCGTGTTAATCCCAGCTCAG                                        <  SRR4302543.3054764/94‑1 (MQ=60)
                                                        TTATTACACTGACAGGATTTTACATATTTAACAGATTGTCCTCAGATAAAAGGGCTGGAATACCAGCCCTTGTTCGTGTTAATCCCAGCTCAGA                                       >  SRR4302543.326483/1‑94 (MQ=60)
                                                         TATTACACTGACAGGATTTTACATATTTAACAGATTGTCCTCAGATAAAAGGGCTGGAATACCAGCCCTTGTTCGTGTTAATCCCAGCTCAGAA                                      <  SRR4302543.4686065/94‑1 (MQ=60)
                                                          ATTACACTGACAGGATTTTACATATTTAACAGATTGTCCTCAGATAAAAGGGCTGGAATACCAGCCCTTGTTCGTGTTAATCCCAGCTCAGAAT                                     <  SRR4302543.6714147/94‑1 (MQ=60)
                                                          ATTACACTGACAGGATTTTACATATTTAACAGATTGTCCTCAGATAAAAGGGCTGGAATACCAGCCCTTGTTCGTGTTAATCCCAGCTCAGAAT                                     <  SRR4302543.396904/94‑1 (MQ=60)
                                                          ATTACACTGACAGGATTTTACATATTTAACAGATTGTCCTCAGATAAAAGGGCTGGAATACCAGCCCTTGTTCGTGTTAATCCCAGCTCAGAAT                                     <  SRR4302543.3084599/94‑1 (MQ=60)
                                                             ACACTGACAGGATTTTACATATTTAACAGATTGTCCTCAGATAAAAGGGCTGGAATACCAGCCCTTGTTCGTGTTAATCCCAGCTCAGAATAAC                                  <  SRR4302543.3314051/94‑1 (MQ=60)
                                                              CACTGACAGGATTTTACATATTTAACAGATTGTCCTCAGATAAAAGGGCTGGAATACCAGCCCTTGTTCGTGTTAATCCCAGCTCAGAATAACT                                 <  SRR4302543.5853560/94‑1 (MQ=60)
                                                                CTGACAGGATTTTACATATTTAACAGATTGTCCTCAGATAAAAGGGCTGGAATACCAGCCCTTGTTCGTGTTAATCCCAGCTCAGAATAACTTT                               >  SRR4302543.4489056/1‑94 (MQ=60)
                                                                CTGACAGGATTTTACATATTTAACAGATTGTCCTCAGATAAAAGGGCTGGAATACCAGCCCTTGTTCGTGTTAATCCCAGCTCAGAATAACTTT                               <  SRR4302543.385541/94‑1 (MQ=60)
                                                                CTGACAGGATTTTACATATTTAACAGATTGTCCTCAGATAAAAGGGCTGGAATACCAGCCCTTGTTCGTGTTAATCCCAGCTCAGAATAACTTT                               >  SRR4302543.7338812/1‑94 (MQ=60)
                                                                CTGACAGGATTTTACATATTTAACAGATTGTCCTCAGATAAAAGGGCTGGAATACCAGCCCTTGTTCGTGTTAATCCCAGCTCAGAATAACTTT                               <  SRR4302543.2424235/94‑1 (MQ=60)
                                                                ATGACAGGATTTTACATATTTAACAGATTGTCCTCAGATAAAAGGGCTGGAATACCAGCCCTTGTCCGTGTTAATCCCAGCTCAGAATAACTTT                               <  SRR4302543.4306008/94‑1 (MQ=60)
                                                                  GACAGGATTTTACATATTTAACAGATTGTCCTCAGATAAAAGGGCTGGAATACCAGCCCTTGTTCGTGTTAATCCCAGCTCAGAATAACTTTCC                             >  SRR4302543.588281/1‑94 (MQ=60)
                                                                  GACAGGATTTTACATATTTAACAGATTGTCCTCAGATAAAAGGGCTGGAATACCAGCCCTTGTTCGTGTTAATCCCAGCTCAGAATAACTTTCC                             <  SRR4302543.1796636/94‑1 (MQ=60)
                                                                  GACAGGATTTTACATATTTAACAGATTGTCCTCAGATAAAAGGGCTGGAATACCAGCCCTTGTTCGTGTTAATCCCAGCTCAGAATAACTTTCC                             <  SRR4302543.4045160/94‑1 (MQ=60)
                                                                  GACAGGATTTTACATATTTAACAGATTGTCCTCAGATAAAAGGGCTGGAATACCAGCCCTTGTTCGTGTTAATCCCAGCTCAGAATAACTTTCC                             <  SRR4302543.4062892/94‑1 (MQ=60)
                                                                   ACAGGATTTTACATATTTAACAGATTGTCCTCAGATAAAAGGGCTGGAATACCAGCCCTTGTTCGTGTTAATCCCAGCTCAGAATAACTTTCCC                            <  SRR4302543.5640168/94‑1 (MQ=60)
                                                                    CAGGATTTTACATATTTAACAGATTGTCCTCAGATAAAAGGGCTGGAATACCAGCCCTTGTTCGTGTTAATCCCAGCTCAGAATAACTTTCCCG                           >  SRR4302543.3156101/1‑94 (MQ=60)
                                                                    CAGGATTTTACATATTTAACAGATTGTCCTCAGATAAAAGGGCTGGAATACCAGCCCTTGTTCGTGTTAATCCCAGCTCAGAATAACTTTCCCG                           <  SRR4302543.3503680/94‑1 (MQ=60)
                                                                    CAGGATTTTACATATTTAACAGATTGTCCTCAGATAAAAGGGCTGGAATACCAGCCCTTGTTCGTGTTAATCCCAGCTCAGAATAACTTTCCCG                           >  SRR4302543.2991285/1‑94 (MQ=60)
                                                                     AGGATTTTACATATTTAACAGATTGTCCTCAGATAAAAGGGCTGGAATACCAGCCCTTGTTCGTGTTAATCCCAGCTCAGAATAACTTTCCCGG                          <  SRR4302543.6899865/94‑1 (MQ=60)
                                                                     AGGATTTTACATATTTAACAGATTGTCCTCAGATAAAAGGGCTGGAATACCAGCCCTTGTTCGTGTTAATCCCAGCTCAGAATAACTTTCCCGG                          >  SRR4302543.7142457/1‑94 (MQ=60)
                                                                       GATTTTACATATTTAACAGATTGTCCTCAGATAAAAGGGCTGGAATACCAGCCCTTGTTCGTGTTAATCCCAGCTCAGAATAACTTTCCCGGAC                        >  SRR4302543.3168910/1‑94 (MQ=60)
                                                                        ATTTTACATATTTAACAGATTGTCCTCAGATAAAAGGGCTGGAATACCAGCCCTTGTTCGTGTTAATCCCAGCTCAGAATAACTTTCCCGGACT                       >  SRR4302543.5127365/1‑94 (MQ=60)
                                                                        ATTTTACATATTTAACAGATTGTCCTCAGATAAAAGGGCTGGAATACCAGCCCTTGTTCGTGTTAATCCCAGCTCAGAATAACTTTCCCGGACT                       <  SRR4302543.7740826/94‑1 (MQ=60)
                                                                        ATTTTACATATTTAACAGATTGTCCTCAGATAAAAGGGCTGGAATACCAGCCCTTGTTCGTGTTAATCCCAGCTCAGAATAACTTTCCCGGACT                       <  SRR4302543.2169537/94‑1 (MQ=60)
                                                                         TTTTACATATTTAACAGATTGTCCTCAGATAAAAGGGCTGGAATACCAGCCCTTGTTCGTGTTAATCCCAGCTCAGAATAACTTTCCCGGACTG                      <  SRR4302543.1060644/94‑1 (MQ=60)
                                                                         TTTTACATATTTAACAGATTGTCCTCAGATAAAAGGGCTGGAATACCAGCCCTTGTTCGTGTTAATCCCAGCTCAGAATAACTTTCCCGGACTG                      >  SRR4302543.770637/1‑94 (MQ=60)
                                                                         TTTTACATATTTAACAGATTGTCCTCAGATAAAAGGGCTGGAATACCAGCCCTTGTTCGTGTTAATCCCAGCTCAGAATAACTTTCCCGGACTG                      >  SRR4302543.2680813/1‑94 (MQ=60)
                                                                           TTACATATTTAACAGATTGTCCTCAGATAAAAGGGCTGGAATACCAGCCCTTGTTCGTGTTAATCCCAGCTCAGAATAACTTTCCCGGACTGGC                    >  SRR4302543.5601051/1‑94 (MQ=60)
                                                                            TACATATTTAACAGATTGTCCTCAGATAAAAGGGCTGGAATACCAGCCCTTGTTCGTGTTAATCCCAGCTCAGAATAACTTTCCCGGACTGGCC                   <  SRR4302543.6523826/94‑1 (MQ=60)
                                                                            TACATATTTAACAGATTGTCCTCAGATAAAAGGGCTGGAATACCAGCCCTTGTTCGTGTTAATCCCAGCTCAGAATAACTTTCCCGGACTGGCC                   <  SRR4302543.2789192/94‑1 (MQ=60)
                                                                             TCATATTTAACAGATTGTCCTCAGATAAAAGGGCTGGAATACCAGCCCTCGTTCGTGTTAATCCCAGCTCAGAATAACTTTCCCGGACTGGCCC                  <  SRR4302543.5985393/94‑1 (MQ=60)
                                                                             ACATATTTAACAGATTGTCCTCAGATAAAAGGGCTGGAATACCAGCCCTTGTTCGTGTTAATCCCAGCTCAGAATAACTTTCCCGGACTGGCCC                  <  SRR4302543.7562142/94‑1 (MQ=60)
                                                                             ACATATTTAACAGATTGTCCTCAGATAAAAGGGCTGGAATACCAGCCCTTGTTCGTGTTAATCCCAGCTCAGAATAACTTTCCCGGACTGGCCC                  <  SRR4302543.5985392/94‑1 (MQ=60)
                                                                             ACATATTTAACAGATTGTCCTCAGATAAAAGGGCTGGAATACCAGCCCTTGTTCGTGTTAATCCCAGCTCAGAATAACTTTCCCGGACTGGCCC                  <  SRR4302543.306187/94‑1 (MQ=60)
                                                                             ACATATTTAACAGATTGTCCTCAGATAAAAGGGCTGGAATACCAGCCCTTGTTCGTGTTAATCCCAGCTCAGAATAACTTTCCCGGACTGGCCC                  >  SRR4302543.73110/1‑94 (MQ=60)
                                                                              CATATTTAACAGATTGTCCTCAGATAAAAGGGCTGGAATACCAGCCCTTGTTCGTGTTAATCCCAGCTCAGAATAACTTTCCCGGACTGGCCCG                 >  SRR4302543.2867100/1‑94 (MQ=60)
                                                                               ATATTTAACAGATTGTCCTCAGATAAAAGGGCTGGAATACCAGCCCTTGTTCGTGTTAATCCCAGCTCAGAATAACTTTCCCGGACTGGCCCGA                >  SRR4302543.4534586/1‑94 (MQ=60)
                                                                                TATTTAACAGATTGTCCTCAGATAAAAGGGCTGGAATACCAGCCCTTGTTCGTGTTAATCCCAGCTCAGAATAACTTTCCCGGACTGGCCCGAA               <  SRR4302543.6403814/94‑1 (MQ=60)
                                                                                 ATTTAACAGATTGTCCTCAGATAAAAGGGCTGGAATACCAGCCCTTGTTCGTGTTAATCCCAGCTCAGAATAACTTTCCCGGACTGGCCCGAAC              <  SRR4302543.7194113/94‑1 (MQ=60)
                                                                                 ATTTAACAGATTGTCCTCAGATAAAAGGGCTGGAATACCAGCCCTTGTTCGTGTTAATCCCAGCTCAGAATAACTTTCCCGGACTGGCCCGAAC              <  SRR4302543.5438362/94‑1 (MQ=60)
                                                                                 ATTTAACAGATTGTCCTCAGATAAAAGGGCTGGAATACCAGCCCTTGTTCGTGTTAATCCCAGCTCAGAATAACTTTCCCGGACTGGCCCGAAC              >  SRR4302543.2631100/1‑94 (MQ=60)
                                                                                 ATTTAACAGATTGTCCTCAGATAAAAGGGCTGGAATACCAGCCCTTGTTCGTGTTAATCCCAGCTCAGAATAACTTTCCCGGACTGGCCCGAAC              >  SRR4302543.6132126/1‑94 (MQ=60)
                                                                                 ATTTAACAGATTGTCCTCAGATAAAAGGGCTGGAATACCAGCCCTTGTTCGTGTTAATCCCAGCTCAGAATAACTTTCCCGGACTGGCCCGAAC              <  SRR4302543.7352022/94‑1 (MQ=60)
                                                                                 ATTTAACAGATTGTCCTCAGATAAAAGGGCTGGAATACCAGCCCTTGTTCGTGTTAATCCCAGCTCAGAATAACTTTCCCGGACTGGCCCGAAC              <  SRR4302543.108509/94‑1 (MQ=60)
                                                                                 ATTTAACAGATTGTCCTCAGATAAAAGGGCTGGAATACCAGCCCTTGTTCGTGTTAATCCCAGCTCAGAATAACTTTCCCGGACTGGCCCGAAC              <  SRR4302543.5004382/94‑1 (MQ=60)
                                                                                 ATTTAACAGATTGTCCTCAGATAAAAGGGCTGGAATACCAGCCCTTGTTCGTGTTAATCCCAGCTCAGAATAACTTTCCCGGACTGGCCCGAAC              >  SRR4302543.4180901/1‑94 (MQ=60)
                                                                                  TTTAACAGATTGTCCTCAGATAAAAGGGCTGGAATACCAGCCCTTGTTCGTGTTAATCCCAGCTCAGAATAACTTTCCCGGACTGGCCCGAACG             <  SRR4302543.2563352/94‑1 (MQ=60)
                                                                                  TTTAACAGATTGTCCTCAGATAAAAGGGCTGGAATACCAGCCCTTGTTCGTGTTAATCCCAGCTCAGAATAACTTTCCCGGACTGGCCCGAACG             <  SRR4302543.7973912/94‑1 (MQ=60)
                                                                                  TTTAACAGATTGTCCTCAGATAAAAGGGCTGGAATACCAGCCCTTGTTCGTGTTAATCCCAGCTCAGAATAACTTTCCCGGACTGGCCCGAACG             <  SRR4302543.3135627/94‑1 (MQ=60)
                                                                                     AACAGATTGTCCTCAGATAAAAGGGCTGGAATACCAGCCCTTGTTCGTGTTAATCCCAGCTCAGAATAACTTTCCCGGACTGGCCCGAACGCAT          <  SRR4302543.2396420/94‑1 (MQ=60)
                                                                                     AACAGATTGTCCTCAGATAAAAGGGCTGGAATACCAGCCCTTGTTCGTGTTAATCCCAGCTCAGAATAACTTTCCCGGACTGGCCCGAACGCAT          >  SRR4302543.4384586/1‑94 (MQ=60)
                                                                                      ACAGATTGTCCTCAGATAAAAGGGCTGGAATACCAGCCCTTGTTCGTGTTAATCCCAGCTCAGAATAACTTTCCCGGACTGGCCCGAACGCACA         >  SRR4302543.6428534/1‑94 (MQ=60)
                                                                                       CAGATTGTCCTCAGATAAAAGGGCTGGAATACCAGCCCTTGTTCGTGTTAATCCCAGCTCAGAATAACTTTCCCGGACTGGCCCGAACGCATAG        >  SRR4302543.7367252/1‑94 (MQ=60)
                                                                                       CAGATTGTCCTCAGATAAAAGGGCTGGAATACCAGCCCTTGTTCGTGTTAATCCCAGCTCAGAATAACTTTCCCGGACTGGCCCGAACGCATAG        <  SRR4302543.6510212/94‑1 (MQ=60)
                                                                                       CAGATTGTCCTCAGATAAAAGGGCTGGAATACCAGCCCTTGTTCGTGTTAATCCCAGCTCAGAATAACTTTCCCGGACTGGCCCGAACGCATAG        <  SRR4302543.7709838/94‑1 (MQ=60)
                                                                                       CAGATTGTCCTCAGATAAAAGGGCTGGAATACCAGCCCTTGTTCGTGTTAATCCCAGCTCAGAATAACTTTCCCGGACTGGCCCGAACGCATAG        >  SRR4302543.7178354/1‑94 (MQ=60)
                                                                                        AGATTGTCCTCAGATAAAAGGGCTGGAATACCAGGCCTTGTTCGTGTTAATCCCAGCTCAGAATAACTTTCCCGGACTGGCCCGAACGCATAGC       >  SRR4302543.6013368/1‑94 (MQ=60)
                                                                                        AGATTGTCCTCAGATAAAAGGGCTGGAATACCAGCCCTTGTTCGTGTTAATCCCAGCTCAGAATAACTTTCCCGGACTGGCCCGAACGCATAGC       >  SRR4302543.5342710/1‑94 (MQ=60)
                                                                                         GATTGTCCTCAGATAAAAGGGCTGGAATACCAGCCCTTGTTCGTGTTAATCCCAGCTCAGAATAACTTTCCCGGACTGGCCCGAACGCATAGCG      <  SRR4302543.6468736/94‑1 (MQ=60)
                                                                                         GATTGTCCTCAGATAAAAGGGCTGGAATACCAGCCCTTGTTCGTGTTAATCCCAGCTCAGAATAACTTTCCCGGACTGGCCCGAACGCATAGCG      >  SRR4302543.214513/1‑94 (MQ=60)
                                                                                         GATTGTCCTCAGATAAAAGGGCTGGAATACCAGCCCTTGTTCGTGTTAATCCCAGCTCAGAATAACTTTCCCGGACTGGCCCGAACGCATAGCG      >  SRR4302543.4284603/1‑94 (MQ=60)
                                                                                         GATTGTCCTCAGATAAAAGGGCTGGAATACCAGCCCTTGTTCGTGTTAATCCCAGCTCAGAATAACTTTCCCGGACTGGCCCGAACGCATAGCG      >  SRR4302543.2755609/1‑94 (MQ=60)
                                                                                          ATTGTCCTCAGATAAAAGGGCTGGAATACCAGCCCTTGTTCGTGTTAATCCCAGCTCAGAATAACTTTCCCGGACTGGCCCGAACGCATAGCGT     >  SRR4302543.6227466/1‑94 (MQ=60)
                                                                                           TTGTCCTCAGATAAAAGGGCTGGAATACCAGCCCTTGTTCGTGTTAATCCCAGCTCAGAATAACTTTCCCGGACTGGCCCGAACGCATAGCGTC    >  SRR4302543.1064846/1‑94 (MQ=60)
                                                                                           TTGTCCTCAGATAAAAGGGCTGGAATACCAGCCCTTGTTCGTGTTAATCCCAGCTCAGAATAACTTTCCCGGACTGGCACGTACGCCTAGCGTC    >  SRR4302543.1064847/1‑94 (MQ=60)
                                                                                           TTGTCCTCAGATAAAAGGGCTGGAATACCAGCCCTTGTTCGTGTTAATCCCAGCTCAGAACAACTTTCCCGGACTGGCCCGAACGCATAGCGTC    >  SRR4302543.1064845/1‑94 (MQ=60)
                                                                                            TGTCCTCAGATAAAAGGGCTGGAATACCAGCCCTTGTTCGTGTTAATCCCAGCTCAGAATAACTTTCCCGGACTGGCCCGAACGCATAGCGTCA   >  SRR4302543.7490872/1‑94 (MQ=60)
                                                                                             NTNCTCANATAAAAGGGCTGNNNNACCAGCCCTTGTTCGTGTTAATCCCAGCTCAGAATAACTTTCCCGGACTGGCCCGAACGCATAGCGTCAA  <  SRR4302543.2658289/94‑1 (MQ=60)
                                                                                             GTCCTCAGATAAAAGGGCTGGAATACCAGCCCTTGTTCGTGTTAATCCCAGCTCAGAATAACTTTCCCGGACTGGCCCGAACGCATAGCGTCAA  >  SRR4302543.787830/1‑94 (MQ=60)
                                                                                             GTCCTCAGATAAAAGGGCTGGAATACCAGCCCTTGTTCGTGTTAATCCCAGCTCAGAATAACTTTCCCGGACTCGCCCGAACGCATAGCGTCAA  >  SRR4302543.1552814/1‑94 (MQ=60)
                                                                                             |                                                                                             
AGGGTAGAGAGATAATGAGAGCAGCTATATAAGAGATCAGCACAATTACGAACTCTTTATTACACTGACAGGATTTTACATATTTAACAGATTATCCTCAGATAAAAGGGCTGGAATACCAGCCCTTGTTCGTGTTAATCCCAGCTCAGAATAACTTTCCCGGACTGGCCCGAACGCATAGCGTCAA  >  NC_000913/3787813‑3787999

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 17 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: