Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A1 F1 I1 R1 1696 279.3 15874187 97.8% 15524954 93.0

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 3,792,026 A→G N138S (AAC→AGC)  rfaD → ADP‑L‑glycero‑D‑mannoheptose‑6‑epimerase

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009133,792,0260AG99.3% 1374.8 / ‑2.6 436N138S (AAC→AGC) rfaDADP‑L‑glycero‑D‑mannoheptose‑6‑epimerase
Reads supporting (aligned to +/- strand):  ref base A (2/1);  new base G (191/242);  total (193/243)
Fisher's exact test for biased strand distribution p-value = 5.86e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 7.64e-01

Only 100 of 452 total aligned reads displayed.

AAATCCCGTTCCTGTACGCTTCTTCCGCAGCCACCTACGGCGGACGCACCTCCGACTTTATTGAATCCCGCGAGTACGAAAAACCGTTGAACGTCTACGGTTACTCAAAATTCCTGTTTGATGAATATGTTCGTCAAATCCTGCCTGAAGCGAACTCGCAGATTGTTGGCTTCCGTTATT  >  NC_000913/3791936‑3792115
                                                                                          |                                                                                         
   tCCCGTTCCTGTACGCTTCTTCCGCAGCCACCTACGGCGGACGCACCTCCGACTTTATTGAATCCCGCGAGTACGAAAAACCGTTGAGCGTCt                                                                                      <  1:3951182/93‑1 (MQ=255)
     ccGTTCCTGTACGCTTCTTCCGCAGCCACCTACGGCGGACGCACCTCCGACTTTATTGAATCCCGCGAGTACGAAAAACCGTTGAGCGTCTAc                                                                                    >  2:7398371/1‑93 (MQ=255)
     ccGTTCCTGTACGCTTCTTCCGCAGCCACCTACGGCGGACGCACCTCCGACTTTATTGAATCCCGCGAGTACGAAAAACCGTTGAGCGTCTAc                                                                                    <  2:609496/93‑1 (MQ=255)
      cGTTCCTGTACGCTTCTTCCGCAGCCACCTACGGCGGACGCACCTCCGACTTTATTGAATCCCGCGAGTACGAAAAACCGTTGAGCGTCTTCg                                                                                   >  2:2452840/1‑93 (MQ=255)
      cGTTCCTGTACGCTTCTTCCGCAGCCACCTACGGCGGACGCACCTCCGACTTTATTGAATCCCGCGAGTACGAAAAACCGTTGAGCGTCTACg                                                                                   <  1:1916372/93‑1 (MQ=255)
      cGTTCCTGTACGCTTCTTCCGCAGCCACCTACGGCGGACGCACCTCCGACTTTATTGAATCCCGCGAGTACGAAAAACCGTTGAGCGTCTACg                                                                                   <  1:2081821/93‑1 (MQ=255)
       gTTCCTGTACGCTTCTTCCGCAGCCACCTACGGCGGACGCACCTCCGACTTTATTGAATCCCGCGAGTACGAAAAACCGTTGAGCGTCTACgg                                                                                  <  1:7886010/93‑1 (MQ=255)
        ttCCTGTACGCTTCTTCCGCAGCCACCTACGGCGGACGCACCTCCGACTTTATTGAATCCCGCGAGTACGAAAAACCGTTGAGCGTCTACGGt                                                                                 >  2:5702414/1‑93 (MQ=255)
        ttCCTGTACGCTTCTTCCGCAGCCACCTACGGCGGACGCACCTCCGACTTTATTGAATCCCGCGAGTACGAAAAACCGTTGAGAGTATACGGt                                                                                 >  1:6418955/1‑93 (MQ=255)
               aCGCTTCTTCCGCAGCCACCTACGGCGGACGCACCTCCGACTTTATTGAATCCCGCGAGTACGAAAAACCGTTGAGCGCCTACGGTTACTCaa                                                                          >  1:466317/1‑93 (MQ=255)
                cGCTTCTTCCGCAGCCACCTACGGCGGACGCACCTCCGACTTTATTGAATCCCGCGAGTACGAAAAACCGTTGAGCGTCTACGGTTACTCaaa                                                                         >  1:2393894/1‑93 (MQ=255)
                 gCTTCTTCCGCAGCCACCTACGGCGGACGCACCTCCGACTTTATTGAATCCCGCGAGTACGAAAAACCGTTGAGCGTCTACGGTTACTCaaaa                                                                        >  1:6159088/1‑93 (MQ=255)
                    tcttcCGCAGCCACCTACGGCGGACGCACCTCCGACTTTATTGAATCCCGCGAGTACGAAAAACCGTTGAGCGTCTACGGTTACTCAAAATTc                                                                     >  1:4566574/1‑93 (MQ=255)
                      ttcCGCAGCCACCTACGGCGGACGCACCTCCGACTTTATTGAATCCCGCGAGTACGAAAAACCGTTGAGCGTCTACGGTTACTCAAAATTCCt                                                                   <  1:4956328/93‑1 (MQ=255)
                        ccGCAGCCACCTACGGCGGACGCACCTCCGACTTTATTGAATCCCGCGAGTACGAAAAACCGTTGAGCGTCTACGGTTACTCAAAATTCCTGt                                                                 <  1:5315328/93‑1 (MQ=255)
                         cGCAGCCACCTACGGCGGACGCACCTCCGACTTTATTGAATCCCGCGAGTACGAAAAACCGTTGAGCGTCTACGGTTACTCAAAATTCCTGtt                                                                <  1:1473213/93‑1 (MQ=255)
                         cGCAGCCACCTACGGCGGACGCACCTCCGACTTTATTGAATCCCGCGAGTACGAAAAACCGTTGAGCGTCTACGGTTACTCAAAATTCCTGtt                                                                <  2:1008944/93‑1 (MQ=255)
                          gCAGCCACCTACGGCGGACGCACCTCCGACTTTATTGAATCCCGCGAGTACGAAAAACCGTTGAGCGTCTACGGTTACTCAAAATTCCTGttt                                                               <  2:6551864/93‑1 (MQ=255)
                          gCAGCCACCTACGGCGGACGCACCTCCGACTTTATTGAATCCCGCGAGTACGAAAAACCGTTGAGCGTCTACGGTTACTCAAAATTCCTGttt                                                               <  2:1914848/93‑1 (MQ=255)
                          ccAGCCACCTCGGGCGGACGCCCCTCCGACTTTATTGAATCCCGCGAGTACGAAAACCCGTTGAGCGTCTACGGTTACTCAAAATTCCTGttt                                                               <  1:6601985/92‑1 (MQ=255)
                           cAGCCACCTAGGGCGGGCGCCCCTCCGAGTTTATTGGAAGCCGCGAGTACGAAACACCGCTGAGCGACTACGGTTACTCAAAATTCCtgtgtg                                                              >  2:1198091/1‑93 (MQ=255)
                            aGCCACCTACGGCGGACGCACCTCCGACTTTATTGAATCCCGCGAGTACGAAAAACCGTTGAGCGTCTACGGTTACTCAAAATTCCTGTTtga                                                             <  2:1976560/93‑1 (MQ=255)
                            aGCCACCTACGGCGGACGCACCTCCGACTTTATTGAATCCCGCGAGTACGAAAAACCGGTGAGCGTCTACGGTTACTCAAAATTCCTGCTtga                                                             >  1:3172783/1‑93 (MQ=255)
                             gCCACCTACGGCGGACGCACCTCCGACTTTATTGAATCCCGCGAGTACGAAAAACCGTTGAGCGTCTACGGTTACTCAAAATTCCTGTTtgat                                                            <  1:2681342/93‑1 (MQ=255)
                              ccACCTACGGCGGACGCACCTCCGACTTTATTGAATCCCGCGAGTACGAAAAACCGTTGAGCGTCTACGGTTACTCAAAATTCCTGTTtgatg                                                           >  1:7127984/1‑93 (MQ=255)
                               cACCTACGGCGGACGCACCTCCGACTTTATTGAATCCCGCGAGTACGAAAAACCGTTGAGCGTCTACGGTTACTCAAAATTCCTGTTtgatga                                                          <  2:7616462/93‑1 (MQ=255)
                                cccTACGGCGGACGCACCTCCGACTTTATTGAATCCCGCGAGTACGAAAAACCGTTGAGCGTCTACGGTTACTCAAAATTCCTGTTTGATGaa                                                         <  2:4692599/92‑1 (MQ=255)
                                 ccTACGGCGGACGCACCTCCGACTTTATTGAATCCCGCGAGTACGAATAACCGTTGAGCGTCCACGGTTACTCAAAATTCCTGTTTGATGAat                                                        >  1:2215201/1‑93 (MQ=255)
                                 ccTACGGCGGACGCACCTCCGACTTTATTGAATCCCGCGAGTACGAAAAACCGTTGAGCGTCTACGGTTACTCAAAATTCCTGTTTGATGAat                                                        <  2:3254534/93‑1 (MQ=255)
                                  cTACGGCGGACGCACCTCCGACTTTATTGAATCCCGCGAGTACGAAAAACCGTTGAGCGTCTACGGTTACTCAAAATTCCTGTTTGATGAata                                                       <  1:5620165/93‑1 (MQ=255)
                                  cTACGGCGGACGCACCTCCGACTTTATTGAATCCCGCGAGTACGAAAAACCGTTGAGCGTCTACGGTTACTCAAAATTCCTGTTTGATGAata                                                       <  1:6647000/93‑1 (MQ=255)
                                   tACGGCGGACGCACCTCCGACTTTATTGAATCCCGCGAGTACGAAAAACCGTTGAGCGTCTACGGTTACTCAAAATTCCTGTTTGATGAatat                                                      <  2:7823990/93‑1 (MQ=255)
                                   tACGGCGGACGCACCTCCGACTTTATTGAATCCCGCGAGTACGAAAAACCGTTGAACGTCTACGGTTACTCAAAATTCCTGTTTGATGAatat                                                      <  1:7211397/93‑1 (MQ=255)
                                    aCGGCGGACGCACCTCCGACTTTATTGAATCCCGCGAGTACGAAAAACCGTTGAGCGTCTACGGTTACTCAAAATTCCTGTTTGATGAATATg                                                     >  2:4181214/1‑93 (MQ=255)
                                    aCGGCGGACGCACCTCCGACTTTATTGAATCCCGCGAGTACGAAAAACCGTTGAGCGTCTACGGTTACTCAAAATTCCTGTTTGATGAATATg                                                     <  2:6944254/93‑1 (MQ=255)
                                      ggcggACGCGCCTCCGACTTTATTGAATCCCGCGAGTACGAAAAACCGTTGAGCATCTACGGTTACTCAAAATTCCTGTTTGATGAATATGtt                                                   <  2:316074/93‑1 (MQ=255)
                                      ggcggACGCACCTCCGACTTTATTGAATCCCGCGAGTACGAAAAACCGTTGAGCGTCTACGGTTACTCAAAATTCCTGTTTGATGAATATGtt                                                   <  2:7472112/93‑1 (MQ=255)
                                      ggcggACGCACCTCCGACTTTATTGAATCCCGCGAGTACGAAAAACCGTTGAGCGTCTACGGTTACTCAAAATTCCTGTTTGATGAATATGtt                                                   <  1:3783890/93‑1 (MQ=255)
                                      ggcggACGCACCTCCGACTTTATTGAATCCCGCGAGTACGAAAAACCGTTGAGCGTCTACGGTTACTCAAAATTCCTGTTTGATGAATATGtt                                                   >  1:5891707/1‑93 (MQ=255)
                                       gcggACGCACCTCCGACTTTATTGAATCCCGCGAGTACGAAAAACCGTTGAGCGTCTACGGTTACTCAAAATTCCTGTTTGATGAATATGTTc                                                  >  2:5313220/1‑93 (MQ=255)
                                       gcggACGCACCTCCGACTTTATTGAATCCCGCGAGTACGAAAAACCGTTGAGCGTCTACGGTTACTCAAAATTCCTGTTTGATGAATATGTTc                                                  <  1:6039924/93‑1 (MQ=255)
                                        cggACGCACCTCCGACTTTATTGAATCCCGCGAGTACGAAAAACCGTTGAGCGTCTACGGTTACTCAAAATTCCTGTTTGATGAATATGTTCg                                                 >  1:69394/1‑93 (MQ=255)
                                        cggACGCACCTCCGACTTTATTGAATCCCGCGAGTACGAAAAACCGTTGAGCGTCTACGGTTACTCAAAATTCCTGTTTGATGAATATGTTCg                                                 <  2:4330155/93‑1 (MQ=255)
                                          gACGCACCTCCGACTTTATTGAATCCCGCGAGTACGAAAAACCGTTGTGCGTCTACGGTTACTCAAAATTCCTGTTTGATGAATATGTTAGTc                                               >  2:4598268/1‑93 (MQ=255)
                                           aCGCACCTCCGACTTTATTGAATCCCGCGAGTACGAAAAACCGTTGAGCGTCTACGGTTACTCAAAATTCCTGTTTGATGAATATGTTCGTCa                                              <  2:1793429/93‑1 (MQ=255)
                                            cGCACCTCCGACTTTATTGAATCCCGCGAGTACGAAAAACCGTTGAGCGTCTACGGTTACTCAAAATTCCTGTTTGATGAATATGTTCGTCaa                                             <  2:2721355/93‑1 (MQ=255)
                                             gCACCTCCGACTTTATTGAATCCCGCGAGTACGAAAAACCGTTGAGCGTCTACGGTTACTCAAAATTCCTGTTTGATGAATATGTTCGTCaaa                                            <  1:2861155/93‑1 (MQ=255)
                                             gCACCTCCGACTTTATTGAATCCCGCGAGTACGAAAAACCGTTGAGCGTCTACGGTTACTCAAAATTCCTGTTTGATGAATATGTTCGTCaaa                                            >  2:3803804/1‑93 (MQ=255)
                                               aCCTCCGACTTTATTGAATCCCGCGAGTACGAAAAACCGTTGAGCGTCTACGGTTACTCAAAATTCCTGTTTGATGAATATGTTCGTCAAATc                                          >  1:3614838/1‑93 (MQ=255)
                                                ccTCCGACTTTATTGAATCCCGCGAGTACGAAAAACCGTTGAGCGTCTACGGTTACTCAAAATTCCTGTTTGATGAATATGTTCGTCAGATct                                         >  2:1585859/1‑92 (MQ=255)
                                                 cTCCGACTTTATTGAATCCCGCGAGTACGAAAAACCGTTGAGCGTCTACGGTTACTCAAAATTCCTGTTTGATGAATATGTTCGTCAAATcct                                        >  1:1973950/1‑93 (MQ=255)
                                                 cTCCGACTTTATTGAATCCCGCGAGTACGAAAAACCGTTGAGCGTCTACGGTTACTCAAAATTCCTGTTTGATGAATATGTTCGTCAAATcct                                        <  1:2621042/93‑1 (MQ=255)
                                                 cTCCGACTTTATTGAATCCCGCGAGTACGAAAAACCGTTGAGCGTCTACGGTTACTCAAAATTCCTGTTTGATGAATATGTCCGTCAAATcct                                        >  2:5620013/1‑93 (MQ=255)
                                                 cTCCGACTTTATTGAATCCCGCGAGTACGAAAAACCGTTCAGCGTCTACGGTTACTCAAAATTCCTGTTTGATGAATATGTTCGTCAAATcct                                        >  1:4430273/1‑93 (MQ=255)
                                                  tCCGACTTTATTGAATCCCGCGAGTACGAAAAACCGTTGAGCGTCTACGGTTACTCAAAATTCCTGTTTGATGAATATGTTCGTCAAATcctg                                       >  2:473197/1‑93 (MQ=255)
                                                    cgccTTTATTGAATCCCGCGAGTACGAAAAACCGTTGAGCGTCTACGGTTACTCAAAATTCCTGTTTGATGAATATGTTCGTCAAATcctgcc                                     <  1:2060966/90‑1 (MQ=255)
                                                    cGACTTTATTGAATCCCGCGAGTACGAAAAACCGTTGAGCGTCTACGGTTACTCAAAATTCCTGTTTGATGAATATGTTCGTCAAATcctgcc                                     <  2:730376/93‑1 (MQ=255)
                                                     gACTTTATTGAATCCCGCGAGTACGAAAAACCGTTGAGCGTCTACGGTTACTCAAAATTCCTGTTTGATGAATATGTTCGTCAAATcctgcct                                    <  2:5058958/93‑1 (MQ=255)
                                                     aaCTTTATTGAGTCCCGCGAGTACGAAAAACCGTTGAGCGTCTTCGGTTACTCAAAATTCCTGTTTGATGAATATGTTCGTCAAATcctgcct                                    >  2:6246420/2‑93 (MQ=255)
                                                        tttATTGAATCCCGCGAGTACGAAAAACCGTTGAGCGTCTACGGTTACTCAAAATTCCTGTTTGATGAATATGTTCGTCAAATCCTGCCTGaa                                 >  2:4430817/1‑93 (MQ=255)
                                                        tttATTGAATCCCGCGAGTACGAAAAACCGTTGAGCGTCTACGGTTACTCAAAATTCCTGTTTGATGAATATGTTCGTCAAATCCTGCCTGaa                                 <  1:1206975/93‑1 (MQ=255)
                                                         ttATTGAATCCCGCGAGTACGAAAAACCGTTGAGCGTCTACGGTTACTCAAAATTCCTGTTTGATGAATATGTTCGTCAAATCCTGCCTGAAg                                >  2:3965073/1‑93 (MQ=255)
                                                         ttATTGAATCCCGCGAGTACGAAAAACCGTTGAGCGTCTACGGTTACTCAAAATTCCTGTTTGATGAATATGTTCGTCAAATCCTGCCTGAAg                                >  2:6727012/1‑93 (MQ=255)
                                                         ttATTGAATCCCGCGAGTACGAAAAACCGTTGAGCGTCTACGGTTACTCAAAATTCCTGTTTGATGAATATGTTCGTCAAATCCTGCCTGAAg                                <  2:827700/93‑1 (MQ=255)
                                                          tATTGAATCCCGCGAGTACGAAAAACCGTTGAGCGTCTACGGTTACTCAAAATTCCTGTTTGATGAATATGTTCGTCAAATCCTGCCTGAAGc                               >  2:6422647/1‑93 (MQ=255)
                                                              gAATCCCGCGAGTACGAAAAACCGTTGAGCGTCTACGGTTACTCAAAATTCCTGTTTGATGAATATGTTCGTCAAATCCTGCCTGAAGCGAAc                           >  1:1742897/1‑93 (MQ=255)
                                                               aaTCCCGCGAGTACGAAAAACCGTTGAGCGTCTACGGTTACTCAAAATTCCTGTTTGATGAATATGTTCGTCAAATCCTGCCTGAAGCGAACt                          <  1:2904400/93‑1 (MQ=255)
                                                               aaTCCCGCCAGTACGAAAAACCGTTGAGCCGCGACGGTTACTCAAAATTCCTGTTTGATGAAGATGTTCGTCAAATCCTGCCTGAAGCGAACt                          <  1:3214351/93‑1 (MQ=255)
                                                                aTCCCGCGAGTACGAAAAACCGTTGAGCGTCTACGGTTACTCAAAATTCCTGTTTGATGAATATGTTCGTCAAATCCTGCCTGAAGCGAACTc                         >  2:5918518/1‑93 (MQ=255)
                                                                 tCCCGCGAGTACGAAAAACCGTTGAGCGTCTACGGTTACTCAAAATTCCTGTTTGATGAATATGTTCGTCAAATCCTGCCTGAAGCGAACTCg                        >  1:4800017/1‑93 (MQ=255)
                                                                 tCCCGCGAGTACGAAAAACCGTTGAGCGTCTACGGTTACTCAAAATTCCTGTTTGATGAATATGTTCGTCAAATCCTGCCTGAAGCGAACTCg                        <  2:3050604/93‑1 (MQ=255)
                                                                 tCCCGCGAGTACGAAAAACCGTTGAGCGTCTACGGTTACTCAAAATTCCTGTTTGATGAATATGTTCGTCAAATCCTGCCTGAAGCGAACTCg                        >  2:1290422/1‑93 (MQ=255)
                                                                   ccGCGAGTACGAAAAACCGTTGTGCGTCTACGGTTACTCAAAATTCCTGTTTGATGAATATGTTCGTCAAATCCTGCCTGAAGCGAACTCGCa                      <  2:1363809/93‑1 (MQ=255)
                                                                   ccGCGAGTACGAAAAACCGTTGAGCGTCTACGGTTACTCAAAATTCCTGTTTGATGAATATGTTCGTCAAATCCTGCCTGAAGCGAACTCGCa                      >  2:2277797/1‑93 (MQ=255)
                                                                   ccGCGAGTACGAAAAACCGTTGAGCGTCTACGGTTACTCAAAATTCCTGTTTGATGAATATGTTCGTCAAATCCTGCCTGAAGCGAACTCGCa                      <  1:803698/93‑1 (MQ=255)
                                                                   ccGCGAGTACGAAAAACCGTTGAGCGTCTACGGTTACTCAAAATTCCTGTTTGATGAATATGTTCGTCAAATCCTGCCTGAAGCGAACTCGCa                      >  1:779155/1‑93 (MQ=255)
                                                                    cgcgAGTACGAAAAACCGTTGAGCGTCTACGGTTACTCAAAATTCCTGTTTGATGAATATGTTCGTCAAATCCTGCCTGAAGCGAACTCGCAg                     <  2:7758894/93‑1 (MQ=255)
                                                                     gcgAGTACGAAAAACCGTTGAGCGTCTACGGTTACTCAAAATTCCTGTTTGATGAATATGTTCGTCAAATCCTGCCTGAAGCGAACTCGCAGa                    <  2:2864536/93‑1 (MQ=255)
                                                                      cgAGTACGAAAAACCGTTGAGCGTCTACGGTTACTCAAAATTCCTGTTTGATGAATATGTTCGTCAAATCCTGCCTGAAGCGAACTCGCAGAt                   <  1:6347685/93‑1 (MQ=255)
                                                                       gAGTACGAAAAACCGTTGAGCGTCTACGGTTACTCAAAATTCCTGTTTGATGAATATGTTCGTCAAATCCTGCCTGAAGCGAACTCGCAGAtt                  >  1:5170134/1‑93 (MQ=255)
                                                                        aGTACGAAAAACCGTTGAGCGTCTACGGTTACTCAAAATTCCTGTTTGATGAATATGTTCGTCAAATCCTGCCTGAAGCGAACTCGCAGAttg                 <  1:6755815/93‑1 (MQ=255)
                                                                         gTACGAAAAACCGTTGAGCGTCTACGGTTACTCAAAATTCCTGTTTGATGAATATGTTCGTCAAATCCTGCCTGAAGCGAACTCGCAGAttgt                >  2:3421094/1‑93 (MQ=255)
                                                                          tACGAAAAACCGTTGAGCGTCTACGGTTACTCAAAATTCCTGTTTGATGAATATGTTCGTCAAATCCTGCCTGAAGCGAACTCGCAGAttgtt               <  1:3367537/93‑1 (MQ=255)
                                                                          tACGAAAAACCGTTGAGCGTCTACGGTTACTCAAAATTCCTGTTTGATGAATATGTTCGTCAAATCCTGCCTGAAGCGAACTCGCAGAttgtt               <  2:3573891/93‑1 (MQ=255)
                                                                           aCGAAAAACCGTTGAGCGTCTACGGTTACTCAAAATTCCTGTTTGATGAATATGTTCGTCAAATCCTGCCTGAAGCGAACTCGCAGAttgttg              <  1:6084473/93‑1 (MQ=255)
                                                                           aCGAAAAACCGTTGAGCGTCTACGGTTACTCAAAATTCCTGTTTGATGAATATGTTCGTCAAATCCTGCCTGAAGCGAACTCGCAGAttgttg              >  1:1621008/1‑93 (MQ=255)
                                                                           aCGAAAAACCGTTGAGCGTCTACGGTTACTCAAAATTCCTGTTTGATGAATATGTTCGTCAAATCCTGCCTGAAGCGAACTCGCAGAttgttg              <  2:2667507/93‑1 (MQ=255)
                                                                             gAAAAACCGTTGAGCGTCTACGGTTACTCAAAATTCCTGTTTGATGAATATGTTCGTCAAATCCTGCCTGAAGCGAACTCGCAGATTGTTGGc            >  2:2585099/1‑93 (MQ=255)
                                                                              aaaaaCCGTTGAGCGTCTACGGTTACTCAAAATTCCTGTTTGATGAATATGTTCGTCAAATCCTGCCTGAAGCGAACTCGCAGATTGTTGGCt           <  2:6040551/93‑1 (MQ=255)
                                                                               aaaaCCGTTGAGCGTCTACGGTTACTCAAAATTCCTGTTTGATGAATATGTTCGTCAAATCCTGCCTGAAGCGAACTCGCAGATTGTTGGCtt          <  1:4076169/93‑1 (MQ=255)
                                                                               aaaaCCGTTGAGCGTCTACGGTTACTCAAAATTCCTGTTTGATGAATATGTTCGTCAAATCCTGCCTGAAGCGAACTCGCAGATTGTTGGCtt          <  2:2128085/93‑1 (MQ=255)
                                                                                 aaCCGTTGAGCGTCTACGGTTACTCAAAATTCCTGTTTGATGAATATGTTCGTCAAATCCTGCCTGAAGCGAACTCGCAGATTGTTGGCTTcc        <  1:3742807/93‑1 (MQ=255)
                                                                                 aaCCGTTGAGCGTCTACGGTTACTCAAAATTCCTGTTTGATGAATATGTTCGTCAAATCCTGCCTGAAGCGAACTCGCAGATTGTTGGCTTcc        <  1:842955/93‑1 (MQ=255)
                                                                                 aaCCGTTGAGCGTCTACGGTTACTCAAAATTCCTGTTTGATGAATATGTTCGTCAAATCCTGCCTGAAGCGAACTCGCAGATTGTTGGCTTcc        >  1:1001033/1‑93 (MQ=255)
                                                                                  aCCGTTGAGCGTCTACGGTTACTCAAAATTCCTGTTTGATGAATATGTTCGTCAAATCCTGCCTGAAGCGAACTCGCAGATTGTTGGCTTCCg       <  1:7315721/93‑1 (MQ=255)
                                                                                  aCCGTTGAGCGTCTACGGTTACTCAAAATTCCTGTTTGATGAATATGTTCGTCAAATCCTGCCTGAAGCGAACTCGCAGATTGTTGGCTTCCg       <  2:1504379/93‑1 (MQ=255)
                                                                                   ccGTTGAGCGTCTACGGTTACTCAAAATTCCTGTTTGATGAATATGTTCGTCAAATCCTGCCTGAAGCGAACTCGCAGATTGTTGGCTTCCGt      <  1:5725961/93‑1 (MQ=255)
                                                                                   ccGTTGAGCGTCTACGGTTACTCAAAATTCCTGTTTGATGAATATGTTCGTCAAATCCTGCCTGAAGCGAACTCGCAGATTGTTGGCTTCCGt      >  1:2728600/1‑93 (MQ=255)
                                                                                     gTTGAACGTCTACGGTTACTCAAAATTCCTGTTTGATGAATATGTTCGTCAAATCCTGCCTGAAGCGAACTCGCAGATTGTTGGCTTCCGTTa    >  1:7545966/1‑93 (MQ=255)
                                                                                      ttGAGCGTCTACGGTTACTCAAAATTCCTGTTTGATGAATATGTTCGTCAAATCCTGCCTGAAGCGAACTCGCAGATTGTTGGCTTCCGTTAt   >  2:3319584/1‑93 (MQ=255)
                                                                                          |                                                                                         
AAATCCCGTTCCTGTACGCTTCTTCCGCAGCCACCTACGGCGGACGCACCTCCGACTTTATTGAATCCCGCGAGTACGAAAAACCGTTGAACGTCTACGGTTACTCAAAATTCCTGTTTGATGAATATGTTCGTCAAATCCTGCCTGAAGCGAACTCGCAGATTGTTGGCTTCCGTTATT  >  NC_000913/3791936‑3792115

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 19 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

BRESEQ :: bam2aln output Only 200 of 247 total aligned reads displayed.
GTGAAATCCCGTTCCTGTACGCTTCTTCCGCAGCCACCTACGGCGGACGCACCTCCGACTTTATTGAATCCCGCGAGTACGAAAAACCGTTGAACGTCTACGGTTACTCAAAATTCCTGTTTGATGAATATGTTCGTCAAATCCTGCCTGAAGCGAACTCGCAGATTGTTGGCTTCCGTTATTTCA  >  NC_000913/3791933‑3792118
                                                                                             |                                                                                            
GTGAAATCCCGTTCCTGTACGCTTCTTCCGCAGCCACCTACGGCGGACGCACCTCCGACTTTATTGAATCCCGCGAGTACGAAAAACCGTTGAG                                                                                              <  SRR4302543.6391213/94‑1 (MQ=60)
GTGAAATCCCGTTCCTGTACGCTTCTTCCGCAGCCACCTACGGCGGACGCACCTCCGACTTTATTGAATCCCGCGAGTACGAAAAACCGTTGAG                                                                                              <  SRR4302543.6391212/94‑1 (MQ=60)
GTGAAATCCCGTTCCTGTACGCTTCTTCCGCAGCCACCTACGGCGGACGCACCTCCGACTTTATTGAATCCCGCGAGTACGAAAAACCGTTGAG                                                                                              >  SRR4302543.4231534/1‑94 (MQ=60)
GTGAAATCCCGTTCCTGTACGCTTCTTCCGCAGCCACCTACGGCGGACGCACCTCCGACTTTATTGAATCCCGCGAGTACGAAAAACCGTTGAG                                                                                              <  SRR4302543.7321422/94‑1 (MQ=60)
 TGAAATCCCGTTCCTGTACGCTTCTTCCGCAGCCACCTACGGCGGACGCACCTCCGACTTTATTGAATCCCGCGAGTACGAAAAACCGTTGAGC                                                                                             <  SRR4302543.3897715/94‑1 (MQ=60)
 TGAAATCCCGTTCCTGTACGCTTCTTCCGCAGCCACCTACGGCGGACGCACCTCCGACTTTATTGAATCCCGCGAGTACGAAAAACCGTTGAGC                                                                                             <  SRR4302543.225326/94‑1 (MQ=60)
 TGAAATCCCGTTCCTGTACGCTTCTTCCGCAGCCACCTACGGCGGACGCACCTCCGACTTTATTGAATCCCGCGAGTACGAAAAACCGTTGAGC                                                                                             <  SRR4302543.6239784/94‑1 (MQ=60)
 TGAAATCCCGTTCCTGTACGCTTCTTCCGCAGCCACCTACGGCGGACGCACCTCCGACTTTATTGAATCCCGCGAGTACGAAAAACCGTTGAGC                                                                                             <  SRR4302543.3746988/94‑1 (MQ=60)
   AAATCCCGTTCCTGTACGCTTCTTCCGCAGCCACCTACGGCGGACGCACCTCCGACTTTATTGAATCCCGCGAGTACGAAAAACCGTTGAGCGT                                                                                           <  SRR4302543.7973776/94‑1 (MQ=60)
     ATCCCGTTCCTGTACGCTTCTTCCGCAGCCACCTACGGCGGACGCACCTCCGACTTTATTGAATCCCGCGAGTACGAAAAACCGTTGAGCGTCT                                                                                         >  SRR4302543.2929941/1‑94 (MQ=60)
     ATCCCGTTCCTGTACGCTTCTTCCGCAGCCACCTACGGCGGACGCACCTCCGACTTTATTGAATCCCGCGAGGACGAAAAACCGCTGAGCGTCT                                                                                         >  SRR4302543.3665425/1‑94 (MQ=60)
      TCCCGTTCCTGTACGCTTCTTCCGCAGCCACCTACGGCGGACGCACCTCCGACTTTATTGAATCCCGCGAGTACGAAAAACCGTTGAGCGTCTA                                                                                        <  SRR4302543.3986133/94‑1 (MQ=60)
      TCCCGTTCCTGTACGCTTCTTCCGCAGCCACCTACGGCGGACGCACCTCCGACTTTATTGAATCCCGCGAGTACGAAAAACCGTTGAGCGTCTA                                                                                        <  SRR4302543.3077272/94‑1 (MQ=60)
       CCCGTTCCTGTACGCTTCTTCCGCAGCCACCTACGGCGGACGCACCTCCGACTTTATTGAATCCCGCGAGTACGAAAAACCGTTGAGCGTCTAC                                                                                       <  SRR4302543.2562036/94‑1 (MQ=60)
       CCCGTTCCTGTACGCTTCTTCCGCAGCCACCTACGGCGGACGCACCTCCGACTTTATTGAATCCCGCGAGTACGAAAAACCGTTGAGCGTCTAC                                                                                       >  SRR4302543.274772/1‑94 (MQ=60)
       CCCGTTCCTGTACGCTTCTTCCGCAGCCACATACGGCGGACGCACCTCCGACTTTATTGAATCCCGCGAGTACGAAAAACCGTTGAGCGTCTAC                                                                                       <  SRR4302543.175119/94‑1 (MQ=60)
        CCGTTCCTGTACGCTTCTTCCGCAGCCACCTACGGCGGACGCACCTCCGACTTTATTGAATCCCGCGAGTACGAAAAACCGTTGAGCGTCTACG                                                                                      <  SRR4302543.7853193/94‑1 (MQ=60)
        CCGTTCCTGTACGCTTCTTCCGCAGCCACCTACGGCGGACGCACCTCCGACTTTATTGAATCCCGCGAGTACGAAAAACCGTTGAGCGTCTACG                                                                                      <  SRR4302543.5740071/94‑1 (MQ=60)
        CCGTTCCTGTACGCTTCTTCCGCAGCCACCTACGGCGGACGCACCTCCGACTTTATTGAATCCCGCGAGTACGAAAAACCGTTGAGCGTCTACG                                                                                      <  SRR4302543.5036775/94‑1 (MQ=60)
         CGTTCCTGTACGCTTCTTCCGCAGCCACCTACGGCGGACGCACCTCCGACTTTATTGAATCCCGCGAGTACGAAAAACCGTTGAGCGTCTACGG                                                                                     <  SRR4302543.1933647/94‑1 (MQ=60)
         CGTTCCTGTACGCTTCTTCCGCAGCCACCTACGGCGGACGCACCTCCGACTTTATTGAATCCCGCGAGTACGAAAAACCGTTGAGCGTCTACGG                                                                                     <  SRR4302543.2100414/94‑1 (MQ=60)
         CGTTCCTGTACGCTTCTTCCGCAGCCACCTACGGCCGACGCACCTCCGACTTTATTGAATCCCGCGAGTACGAAAAACCGTTGAGCGTCTACGG                                                                                     <  SRR4302543.2281915/94‑1 (MQ=60)
          GTTCCTGTACGCTTCTTCCGCAGCCACCTACGGCGGACGCACCTCCGACTTTATTGAATCCCGCGAGTACGAAAAACCGTTGAGCGTCTACGGT                                                                                    <  SRR4302543.7960194/94‑1 (MQ=60)
          GTTCCTGTACGCTTCTTCCGCAGCCACCTACGGCGGACGCACCTCCGACTTTATTGAATCCCGCGAGTACGAAAAACCGTTGAGCGTCTACGGT                                                                                    >  SRR4302543.7618076/1‑94 (MQ=60)
          GTTCCTGTACGCTTCTTCCGCAGCCACCTACGGCGGACGCACCTCCGACTTTATTGAATCCCGCGAGTACGAAAAACCGTTGAGAGTATACGGT                                                                                    >  SRR4302543.6479424/1‑94 (MQ=60)
           TTCCTGTACGCTTCTTCCGCAGCCACCTACGGCGGACGCACCTCCGACTTTATTGAATCCCGCGAGTACGAAAAACCGTTGAGCGTCTACGGTT                                                                                   <  SRR4302543.3931955/94‑1 (MQ=60)
            TCCTGTACGCTTCTTCCGCAGCCACCTACGGCGGACGCACCTCCGACTTTATTGAATCCCGCGAGTACGAAAAACCGTTGAGCGTCTACGGTTA                                                                                  <  SRR4302543.6333505/94‑1 (MQ=60)
            TCCTGTACGCTTCTTCCGCAGCCACCTACGGCGGACGCACCTCCGACTTTATTGAATCCCGCGAGTACGAAAAACCGTTGAGCGTCTACGGTTA                                                                                  >  SRR4302543.6137134/1‑94 (MQ=60)
            TCCTGTACGCTTCTTCCGCAGCCACCTACGGCGGACGCACCTCCGACTTTATTGAATACCGCGAGTACGAAAAACCGTTGAGCGTCTACGGTTA                                                                                  <  SRR4302543.7307543/94‑1 (MQ=60)
              CTGTACGCTTCTTCCGCAGCCACCTACGGCGGACGCACCTCCGACTTTATTGAATCCCGCGAGTACGAAAAACCGTTGAGCGTCTACGGTTACT                                                                                >  SRR4302543.2691696/1‑94 (MQ=60)
              CTGTACGCTTCTTCCGCAGCCACCTACGGCGGACGCACCTCCGACTTTATTGAATCCCGCGAGTACGAAAAACCGTTGAGCGTCTACGGTTACT                                                                                <  SRR4302543.6505073/94‑1 (MQ=60)
               TGTACGCTTCTTCCGCAGCCACCTACGGCGGACGCACCTCCGACTTTATTGAATCCCGCGAGTACGAAAAACCGTTGAGCGTCTACGGTTACTC                                                                               <  SRR4302543.4520179/94‑1 (MQ=60)
                GTACGCTTCTTCCGCAGCCACCTACGGCGGACGCACCTCCGACTTTATTGAATCCCGCGAGTACGAAAAACCGTTGAGCGTCTACGGTTACTCA                                                                              >  SRR4302543.210911/1‑94 (MQ=60)
                 TACGCTTCTTCCGCAGCCACCTACGGCGGACGCACCTCCGACTTTATTGAATCCCGCGAGTACGAAAAACCGTTGAGCGTCTACGGTTACTCAA                                                                             >  SRR4302543.2083153/1‑94 (MQ=60)
                 TACGCTTCTTCCGCAGCCACCTACGGCGGACGCACCTCCGACTTTATTGAATCCCGCGAGTACGAAAAACCGTTGAGCGTCTACGGTTACTCAA                                                                             >  SRR4302543.6956738/1‑94 (MQ=60)
                 TACGCTTCTTCCGCAGCCACCTACGGCGGACGCACCTCCGACTTTATTGAATCCCGCGAGTACGAAAAACCGTTGAGCGCCTACGGTTACTCAA                                                                             >  SRR4302543.470656/1‑94 (MQ=60)
                 GACGCTTCTTCCGCAGCCACCCACGGCGGACGCACCTCCGACTTTATTGAATCCCGCGAGTACGAAAAACCGTTGAGCGTCTACGGTTACTCAA                                                                             <  SRR4302543.6683826/94‑1 (MQ=60)
                  ACGCTTCTTCCGCAGCCACCTACGGCGGACGCACCTCCGACTTTATTGAATCCCGCGAGTACGAAAAACCGTTGAGCGTCTACGGTTACTCAAA                                                                            >  SRR4302543.2415552/1‑94 (MQ=60)
                  ACGCTTCTTCCGCAGCCACCTACGGCGGACGCACCTCCGACTTTATTGAATCCCGCGAGTACGAAAAACCGTTGAGCGTCTACGGTTACTCAAA                                                                            <  SRR4302543.7827676/94‑1 (MQ=60)
                   CGCTTCTTCCGCAGCCACCTACGGCGGACGCACCTCCGACTTTATTGAATCCCGCGAGTACGAAAAACCGTTGAGCGTCTACGGTTACTCAAAA                                                                           >  SRR4302543.6217383/1‑94 (MQ=60)
                    GCTTCTTCCGCAGGCACCTACGGCGGACGCACCTCCGACTTTATTGAATCCCGCGAGTACGAAAAACCGTTGAGCGTCTACGGTTACTCAAAAT                                                                          <  SRR4302543.2164263/94‑1 (MQ=60)
                    GCTTCTTCCGCAGCCACCTACGGCGGACGCACCTCCGACTTTATTGAATCCCGCGAGTACGAAAAACCGTTGAGCGTCTACGGTTACTCAAAAT                                                                          >  SRR4302543.209462/1‑94 (MQ=60)
                    GCTTCTTCCGCAGCCACCTACGGCGGACGCACCTCCGACTTTATTGAATCCCGCGAGTACGAAAAACCGTTGAGCGTCTACGGTTACTCAAAAT                                                                          <  SRR4302543.5720440/94‑1 (MQ=60)
                    GCTTCTTCCGCAGCCACCTACGGCGGACGCACCTCCGACTTTATTGAATCCCGCGAGTACGAAAAACCGTTGAGCGTCTACGGTTACTCAAAAT                                                                          <  SRR4302543.7896590/94‑1 (MQ=60)
                    GCTTCTTCCGCAGCCACCTACGGCGGACGCACCTCCGACTTTATTGAATCCCGCGAGTACGAAAAACCGTTGAGCGTCTACGGTTACTCAAAAT                                                                          <  SRR4302543.6324888/94‑1 (MQ=60)
                    GCTCCTTCCGCAGCCACCTACGGCGGACGCCCCTCCGACTTTATTGAATCCCGCGAGTACGAAAAACCGTTGAGCGTCTACGGTTACTCAAAAT                                                                          <  SRR4302543.829098/94‑1 (MQ=60)
                     CTTCTTCCGCAGCCACCTACGGCGGACGCACCTCCGACTTTATTGAATCCCGCGAGTACGAAAAACCGTTGAGCGTCTACGGTTACTCAAAATT                                                                         >  SRR4302543.4225801/1‑94 (MQ=60)
                      TTCTTCCGCAGCCACCTACGGCGGACGCACCTCCGACTTTATTGAATCCCGCGAGTACGAAAAACCGTTGAGCGTCTACGGTTACTCAAAATTC                                                                        >  SRR4302543.4608115/1‑94 (MQ=60)
                      TTCTTCCGCAGCCACCTACGGCGGACGCACCTCCGACTTTATTGAATCCCGCGAGTACGAAAAACCGTTGAGCGTCTACGGTTACTCAAAATTC                                                                        >  SRR4302543.1436049/1‑94 (MQ=60)
                        CTTCCGCAGCCACCTACGGCGGACGCACCTCCGACTTTATTGAATCCCGCGAGTACGAAAAACCGTTGAGCGTCTACGGTTACTCAANATTCCT                                                                      >  SRR4302543.4412607/1‑94 (MQ=60)
                        CTTCCGCAGCCACCTACGGCGGACGCACCTCCGACTTTATTGAATCCCGCGAGTACGAAAAACCGTTGAGCGTCTACGGTTACTCAAAATTCCT                                                                      <  SRR4302543.2436721/94‑1 (MQ=60)
                        CTTCCGCAGCCACCTACGGCGGACGCACCTCCGACTTTATTGAATCCCGCGAGTACGAAAAACCGTTGAGCGTCTACGGTTACTCAAAATTCCT                                                                      <  SRR4302543.4352221/94‑1 (MQ=60)
                        CTTCCGCAGCCACCTACGGCGGACGCACCTCCGACTTTATTGAATCCCGCGAGTACGAAAAACCGTTGAGCGTCTACGGTTACTCAAAATTCCT                                                                      >  SRR4302543.1944425/1‑94 (MQ=60)
                         TTCCGCAGCCACCTACGGCGGACGCACCTCCGACTTTATTGAATCCCGCGAGTACGAAAAACCGTTGAGCGTCTACGGTTACTCAAAATTCCTG                                                                     >  SRR4302543.5659164/1‑94 (MQ=60)
                         TTCCGCAGCCACCTACGGCGGACGCACCTCCGACTTTATTGAATCCCGCGAGTACGAAAAACCGTTGAGCGTCTACGGTTACTCAAAATTCCTG                                                                     <  SRR4302543.6476727/94‑1 (MQ=60)
                         TTCCGCAGCCACCTACGGCGGACGCACCTCCGACTTTATTGAATCCCGCGAGTACGAAAAACCGTTGAGCGTCTACGGTTACTCAAAATTCCTG                                                                     <  SRR4302543.5001689/94‑1 (MQ=60)
                         GTCCGCAGCCACCTACGGCGGACGCACCTCCGACTTTATTGAATCCCGCGAGTACGAAAAACCGTTGAGCGTCTACGGTTACTCAAAATTCCTG                                                                     <  SRR4302543.2848345/94‑1 (MQ=60)
                          TCCGCAGCCACCTACGGCGGACGCACCTCCGACTTTATTGAATCCCGCGAGTACGAAAAACCGTTGAGCGTCTACGGTTACTCAAAATTCCTGT                                                                    <  SRR4302543.7233407/94‑1 (MQ=60)
                           CCGCAGCCACCTACGGCGGACGCACCTCCGACTTTATTGAATCCCGCGAGTACGAAAAACCGTTGAGCGTCTACGGTTACTCAAAATTCCTGTT                                                                   <  SRR4302543.5363349/94‑1 (MQ=60)
                            CGCAGCCACCTACGGCGGACGCACCTCCGACTTTATTGAATCCCGCGAGTACGAAAAACCGTTGAGCGTCTACGGTTACTCAAAATTCCTGTTT                                                                  <  SRR4302543.4182163/94‑1 (MQ=60)
                            CGCAGCCACCTACGGCGGACGCACCTCCGACTTTATTGAATCCCGCGAGTACGAAAAACCGTTGAGCGTCTACGGTTACTCAAAATTCCTGTTT                                                                  <  SRR4302543.1486483/94‑1 (MQ=60)
                             GCAGCCACCTACGGCGGACGCACCTCCGACTTTATTGAATCCCGCGAGTACGAAAAACCGTTGAGCGTCTACGGTTACTCAAAATTCCTGTTTG                                                                 >  SRR4302543.452582/1‑94 (MQ=60)
                             GCAGCCACCTACGGCGGACGCACCTCCGACTTTATTGAATCCCGCGAGTACGAAAAACCGTTGAGCGTCTACGGTTACTCAAAATTCCTGTTTG                                                                 <  SRR4302543.480644/94‑1 (MQ=60)
                             CCAGCCACCTCGGGCGGACGCCCCTCCGACTTTATTGAATCCCGCGAGTACGAAAACCCGTTGAGCGTCTACGGTTACTCAAAATTCCTGTTTG                                                                 <  SRR4302543.6664199/94‑1 (MQ=60)
                              CAGCCACCTACGGCGGACGCACCTCCGACTTTATTGAATCCCGCGAGTACGAAAAACCGTTGAGCGTCTACGGTTACTCAAAATTCCTGTTTGA                                                                >  SRR4302543.6761580/1‑94 (MQ=60)
                              CAGCCACCTACGGCGGACGCACCTCCGACTTTATTGAATCCCGCGAGTACGAAAAACCGTTGAGCGTCTACGGTTACTCAAAATTCCTGTTTGA                                                                >  SRR4302543.3785967/1‑94 (MQ=60)
                              CAGCCACCTACGGCGGACGCACCTCCGACTTTATTGAATCCCGCGAGTACGAAAAACCGTTGAGCGTCTACGGTTACTCAAAATTCCTGTTTGA                                                                <  SRR4302543.7302803/94‑1 (MQ=60)
                              CAGCCACCTACGGCGGACGCACCTCCGACTTTATTGAATCCCGCGAGTACGAAAAACCGGTGAGCGTCTACGGTTACTCAAAATTCCTGCTTGA                                                                >  SRR4302543.3201366/1‑94 (MQ=60)
                               AGCCACCTACGGCGGACGCCCCTCCGACTTTATTGAATCCCGCGAGTACGAAAAACCGTTGAGCGTCTACGGTTACTCAAAATTCCTGTTTGAT                                                               <  SRR4302543.2274783/94‑1 (MQ=60)
                               AGCCACCTACGGCGGACGCACCTCCGACTTTATTGAATCCCGCGAGTACGAAAAACCGTTGAGCGTCTACGGTTACTCAAAATTCCTGTTTGAT                                                               <  SRR4302543.4100591/94‑1 (MQ=60)
                               AGCCACCTACGGCGGACGCACCTCCGACTTTATTGAATCCCGCGAGTACGAAAAACCGTTGAGCGTCTACGGTTACTCAAAATTCCTGTTTGAT                                                               >  SRR4302543.6493575/1‑94 (MQ=60)
                                GCCACCTACGGCGGACGCACCTCCGACTTTATTGAATCCCGCGAGTACGAAAAACCTTTGAGCGTCTACGGTTACTCAAAATTCCTGTTTGATG                                                              <  SRR4302543.2705911/94‑1 (MQ=60)
                                GCCACCTACGGCGGACGCACCTCCGACTTTATTGAATCCCGCGAGTACGAAAAACCGTTGAGCGTCTACGGTTACTCAAAATTCCTGTTTGATG                                                              <  SRR4302543.3794303/94‑1 (MQ=60)
                                GCCACCTACGGCGGACGCACCTCCGACTTTATTGAATCCCGCGAGTACGAAAAACCGTTGAGCGTCTACGGTTACTCAAAATTCCTGTTTGATG                                                              <  SRR4302543.2705641/94‑1 (MQ=60)
                                GCCACCTACGGCGGACGCACCTCCGACTTTATTGAATCCCGCGAGTACGAAAAACCGTTGAGCGTCTACGGTTACTCAAAATTCCTGTTTGATG                                                              >  SRR4302543.7197245/1‑94 (MQ=60)
                                 CCACCTACGGCGGACGCACCTCCGACTTTATTGAATCCCGCGAGTACGAAAAACCGTTGAGCGTCTACGGTTACTCAAAATTCCTGTTTGATGA                                                             >  SRR4302543.7960460/1‑94 (MQ=60)
                                  CACCTACGGCGGACGCACCTCCGACTTTATTGAATCCCGCGAGTACGAAAAACCGTTGAGCGTCTACGGTTACTCAAAATTCCTGTTTGATGAA                                                            <  SRR4302543.6747652/94‑1 (MQ=60)
                                   CCCTACGGCGGACGCACCTCCGACTTTATTGAATCCCGCGAGTACGAAAAACCGTTGAGCGTCTACGGTTACTCAAAATTCCTGTTTGATGAAT                                                           <  SRR4302543.5248650/94‑1 (MQ=60)
                                   ACCTACGGCGGACGCACCTCCGACTTTATTGAATCCCGCGAGTACGAATAACCGTTGAGCGTCCACGGTTACTCAAAATTCCTGTTTGATGAAT                                                           >  SRR4302543.2235169/1‑94 (MQ=60)
                                   ACCTACGGCGGACGCACCTCCGACTTTATTGAATCCCGCGAGTACGAAAAACCGTTGAGCGTCTACGGTTACTCAAAATTCCTGTTTGATGAAT                                                           >  SRR4302543.1606232/1‑94 (MQ=60)
                                   ACCTACGGCGGACGCACCTCCGACTTTATTGAATCCCGCGAGTACGAAAAACCGTTGAGCGTCTACGGTTACTCAAAATTCCTGTTTGATGAAT                                                           >  SRR4302543.4883351/1‑94 (MQ=60)
                                    CCTACGGCGGACGCACCTCCGACTTTATTGAATCCCGCGAGTACGAAAAACCGTTGAGCGTCTACGGTTACTCAAAATTCCTGTTTGATGAATA                                                          >  SRR4302543.1067820/1‑94 (MQ=60)
                                     CTACGGCGGACGCACCTCCGACTTTATTGAATCCCGCGAGTACGAAAAACCGTTGAGCGTCTACGGTTACTCAAAATTCCTGTTTGATGAATAT                                                         >  SRR4302543.822416/1‑94 (MQ=60)
                                     CTACGGCGGACGCACCTCCGACTTTATTGAATCCCGCGAGTACGAAAAACCGTTGAGCGTCTACGGTTACTCAAAATTCCTGTTTGATGAATAT                                                         <  SRR4302543.5992139/94‑1 (MQ=60)
                                     CTACGGCGGACGCACCTCCGACTTTATTGAATCCCGCGAGTACGAAAAACCGTTGAGCGTCTACGGTTACTCAAAATTCCTGTTTGATGAATAT                                                         >  SRR4302543.6036173/1‑94 (MQ=60)
                                     CTACGGCGGACGCACCTCCGACTTTATTGAATCCCGCGAGTACGAAAAACCGTTGAGCGTCTACGGTTACTCAAAATTCCTGTTTGATGAATAT                                                         <  SRR4302543.6709740/94‑1 (MQ=60)
                                     CTACGGCGGACGCACCTCCGACTTTATTGAATCCCGCGAGTACGAAAAACCGTTGAGCGTCTACGGTTACTCAAAATTCCTGTTTGATGAATAT                                                         <  SRR4302543.6157316/94‑1 (MQ=60)
                                      TACGGCGGACGCACCTCCGACTTTATTGAATCCCGCGAGTACGAAAAACCGTTGAACGTCTACGGTTACTCAAAATTCCTGTTTGATGAATATG                                                        <  SRR4302543.7281303/94‑1 (MQ=60)
                                        CGGCGGACGCACCTCCGACTTTATTGAATCCCGCGAGTACGAAAAACCGTTGAGCGTCTACGGTTACTCAAAATTCCTGTTTGATGAATATGTT                                                      >  SRR4302543.5945421/1‑94 (MQ=60)
                                         GGCGGACGCACCTCCGACTTTATTGAATCCCGCGAGTACGAAACACCGTTGAGCGTCTACGGTTACTCAAAATTCCTGTTTGATGAATATGTTC                                                     <  SRR4302543.7891211/94‑1 (MQ=60)
                                         GGCGGACGCACCTCCGACTTTATTGAATCCCGCGAGTACGAAAAACCGTTGAGCGTCTACGGTTACTCAAAATTCCTGTTTGATGAATATGTTC                                                     <  SRR4302543.3817222/94‑1 (MQ=60)
                                          GCGGACGCACCTCCGACTTTATTGAATCCCGCGAGTACGAAAAACCGTTGAGCGTCTACGGTTACTCAAAATTCCTGTTTGATGAATATGTTCG                                                    <  SRR4302543.513708/94‑1 (MQ=60)
                                          GCGGACGCACCTCCGACTTTATTGAATCCCGCGAGTACGAAAAACCGTTGAGCGTCTACGGTTACTCAAAATTCCTGTTTGATGAATATGTTCG                                                    <  SRR4302543.6097094/94‑1 (MQ=60)
                                          GCGGACGCACCTCCGACTTTATTGAATCCCGCGAGTACGAAAAACCGTTGAGCGTCTACGGTTACTCAAAATTCCTGTTTGATGAATATGTTCG                                                    <  SRR4302543.3379686/94‑1 (MQ=60)
                                          GCGGACGCACCTCCGACTTTATTGAATCCCGCGAGTACGAAAAACCGTTGAGCGTCTACGGTTACTCAAAATTCCTGTTTGATGAATATGTTCG                                                    <  SRR4302543.1748617/94‑1 (MQ=60)
                                          GCGGACGCACCTCCGACTTTATTGAATCCCGCGAGTACGAAAAACCGTTGAGCGTCTACGGTTACTC‑AAATTCCTGTTTGATGAATATGTTCGT                                                   >  SRR4302543.2721248/1‑94 (MQ=60)
                                           CGGACGCACCTCCGACTTTATTGAATCCCGCGAGTACGAAAAACCGTTGAGCGTCTACTGTTACTCAAAATTCCTGTTTGATGAATATGTTCGT                                                   <  SRR4302543.6660465/94‑1 (MQ=60)
                                             GACGCACCTCCGACTTTATTGAATCCCGCGAGTACGAAAAACCGTTGAGCGTCTACGGTTACTCAAAATTCCTGTTTGATGAATATGTTCGTCA                                                 >  SRR4302543.7025608/1‑94 (MQ=60)
                                             GACGCACCTCCGACTTTATTGAATCCCGCGAGTACGAAAAACCGTTGAGCGTCTACGGTTACTCAAAATTCCTGTTTGATGAATATGTTCGTCA                                                 <  SRR4302543.4041683/94‑1 (MQ=60)
                                             GACGCACCTCCGACTTTATTGAATCCCGCGAGTACGAAAAACCGTTGAGCGTCTACGGTTACTCAAAATTCCTGTTTGATGAATATGTTCGTCA                                                 <  SRR4302543.2875240/94‑1 (MQ=60)
                                               CGCACCTCCGACTTTATTGAATCCCGCGAGTACGAAAAACCGTTGAGCGTCTACGGTTACTCAAAATTCCTGTTTGATGAATATGTTCGTCAAA                                               >  SRR4302543.7485269/1‑94 (MQ=60)
                                                GCACCTCCGACTTTATTGAATCCCGCGAGTACGAAAAACCGTTGAGCGTCTACGGTTACTCAAAATTCCTGTTTGATGAATATGTTCGTCAAAT                                              <  SRR4302543.2887250/94‑1 (MQ=60)
                                                GCACCTCCGACTTTATTGAATCCCGCGAGTACGAAAAACCGTTGAGCGTCTACGGTTACTCAAAATTCCTGTTTGATGAATATGTTCGTCAAAT                                              >  SRR4302543.3921679/1‑94 (MQ=60)
                                                 CACCTCCGACTTTATTGAATCCCGCGAGTACGAAAAACCGTTGAGCGTCTACGGTTACTCAAAATTCCTGTTTGATGAATATGTTCGTCAAATC                                             >  SRR4302543.911031/1‑94 (MQ=60)
                                                 CACCTCCGACTTTATTGAATCCCGCGAGTACGAAAAACCGTTGAGCGTCTACGGTTACTCAAAATTCCTGTTTGATGAATATGTTCGTCAAATC                                             >  SRR4302543.4089406/1‑94 (MQ=60)
                                                 CACCTCCGACTTTATTGAATCCCGCGAGTACGAAAAACCGTTGAGCGTCTACGGTTACTCAAAATTCCTGTTTGATGAATATGTTCGTCAAATC                                             >  SRR4302543.3646709/1‑94 (MQ=60)
                                                  ACCTCCGACTTTATTGAATCCCGCGAGTACGAAAAACCGTTGAGCGTCTACGGTTACTCAAAATTCCTGTTTGATGAATATGTTCGTCAAATCC                                            >  SRR4302543.1685694/1‑94 (MQ=60)
                                                  ACCTCCGACTTTATTGAATCCCGCGAGTACGAAAAACCGTTGAGCGTCTACGGTTACTCAAAATTCCTGTTTGATGAATATGTTCGTCAAATCC                                            >  SRR4302543.6945111/1‑94 (MQ=60)
                                                   CCTCCGACTTTATTGAATCCCGCGAGTACGAAAAACCGTTGAGCGTCTACGGTTACTCAAAATTCCTGTTTGATGAATATGTTCGTCAAATCCT                                           <  SRR4302543.1989156/94‑1 (MQ=60)
                                                   CCTCCGACTTTATTGAATCCCGCGAGTACGAAAAACCGTTGAGCGTCTACGGTTACTCAAAATTCCTGTTTGATGAATATGTTCGTCAAATCCT                                           >  SRR4302543.1991646/1‑94 (MQ=60)
                                                   CCTCCGACTTTATTGAATCCCGCGAGTACGAAAAACCGTTGAGCGTCTACGGTTACTCAAAATTCCTGTTTGATGAATATGTTCGTCAAATCCT                                           <  SRR4302543.1840298/94‑1 (MQ=60)
                                                   CCTCCGACTTTATTGAATCCCGCGAGTACGAAAAACCGTTGAGCGTCTACGGTTACTCAAAATTCCTGTTTGATGAATATGTTCGTCAAATCCT                                           >  SRR4302543.3959904/1‑94 (MQ=60)
                                                   CCTCCGACTTTATTGAATCCCGCGAGTACGAAAAACCGTTCAGCGTCTACGGTTACTCAAAATTCCTGTTTGATGAATATGTTCGTCAAATCCT                                           >  SRR4302543.4470406/1‑94 (MQ=60)
                                                    CTCCGACTTTATTGAATCCCGCGAGTACGAAAAACCGTTGAGCGTCTACGGTTACTCAAAATTCCTGTTTGATGAATATGTTCGTCAAATCCTG                                          >  SRR4302543.4885801/1‑94 (MQ=60)
                                                    CTCCGACTTTATTGAATCCCGCGAGTACGAAAAACCGTTGAGCGTCTACGGTTACTCAAAATTCCTGTTTGATGAATATGTTCGTCAAATCCTG                                          <  SRR4302543.2644788/94‑1 (MQ=60)
                                                    CTCCGACTTTATTGAATCCCGCGAGTACGAAAAACCGTTGAGCGTCTACGGTTACTCAAAATTCCTGTTTGATGAATATGTTCGTCAAATCCTG                                          >  SRR4302543.2696598/1‑94 (MQ=60)
                                                    CTCCGACTTTATTGAATCCCGCGAGTACGAAAAACCGTTGAGCGTCTACGGTTACTCAAAATTCCTGTTTGATGAATATGTTCGTCAAATCCTG                                          <  SRR4302543.3296073/94‑1 (MQ=60)
                                                    CTCCGACTTTATTGAATCCCGCGAGTACGAAAAACCGTTGAGCGTCTACGGTTACTCAAAATTCCTGTTTGATGAATATGTTCGTCAAATCCTG                                          <  SRR4302543.4624011/94‑1 (MQ=60)
                                                    CTCCGACTTTATTGAATCCCGCGAGTACGAAAAACCGTTGAGCGTCTACGGTTACTCAAAATTCCTGTTTGATGAATATGTTCGTCAAATCCTG                                          <  SRR4302543.5571263/94‑1 (MQ=60)
                                                      CCGACTTTATTGAATCCCGCGAGTACGAAAAACCGTTGAGCGTCTACGGTTACTCAAAATTCCTGTTTGATGAATATGTTCGTCAAATCCTGCC                                        <  SRR4302543.2686596/94‑1 (MQ=60)
                                                       CGCCTTTATTGAATCCCGCGAGTACGAAAAACCGTTGAGCGTCTACGGTTACTCAAAATTCCTGTTTGATGAATATGTTCGTCAAATCCTGCCT                                       <  SRR4302543.2079402/94‑1 (MQ=60)
                                                       CGACTTTATTGAATCCCGCGAGTACGAAAAACCGTTGAGCGTCTACGGTTACTCAAAATTCCTGTTTGATGAATATGTTCGTCAAATCCTGCCT                                       <  SRR4302543.521916/94‑1 (MQ=60)
                                                       CGACTTTATTGAATCCCGCGAGTACGAAAAACCGTTGAGCGTCTACGGTTACTCAAAATTCCTGTTTGATGAATATGTTCGTCAAATCCTGCCT                                       >  SRR4302543.2312539/1‑94 (MQ=60)
                                                       CGACTTTATTGAATCCCGCGAGTACGAAAAACCGTTGAGCGTCTACGGTTACTCAAAATTCCTGTTTGATGAATATGTTCGTCAAATCCTGCCT                                       <  SRR4302543.2881506/94‑1 (MQ=60)
                                                        GACTTTATTGAATCCCGCGAGTACGAAAAACCGTTGAGCGTCTACGGTTACTCAAAATTCCTGTTTGATGAATATGTTCGTCAAATCCTGCCTG                                      >  SRR4302543.370250/1‑94 (MQ=60)
                                                          CTTTATTGAATCCCGCGAGTACGAAAAACCGTTGAGCGTCTACGGTTACTCAAAATTCCTGTTTGATGAATATGTTCGTCAAATCCTGCCTGAA                                    >  SRR4302543.1181933/1‑94 (MQ=60)
                                                          CTTTATTGAATCCCGCGAGTACGAAAAACCGTTGAGCGTCTACGGTTACTCAAAATTCCTGTTTGATGAATATGTTCGTCAAATCCTGCCTGAA                                    <  SRR4302543.5141792/94‑1 (MQ=60)
                                                          CTTTATTGAATCCCGCGAGTACGAAAAACCGTTGAGCGTCTACGGTTACTCAAAATTCCTGTTTGATGAATATGTTCGTCAAATCCTGCCTGAA                                    <  SRR4302543.6459856/94‑1 (MQ=60)
                                                          CTTTATTGAATCCCGCGAGTACGAAAAACCGTTGAGCGTCTACGGTTACTCAAAATTCCTGTTTGATGAATATGTTCGTCAAATCCTGCCTGAA                                    <  SRR4302543.3553580/94‑1 (MQ=60)
                                                          CTTTATTGAATCCCGCGAGTACGAAAAACCGTTGAGCGTCTACGGTTACTCAAAATTCCTGTTTGATGAATATGTTCGTCAAATCCTGCCTGAA                                    >  SRR4302543.7994302/1‑94 (MQ=60)
                                                          CTTTATTGAATCCCACGAGTACGAAAAACCGTTGAACGTCTACGGTTACTCAAAATTCCTGTTTGATGAATATGTTCGTCAAATCCTGCCTGAA                                    >  SRR4302543.1968940/1‑94 (MQ=60)
                                                           TTTATTGAATCCCGCGAGTACGAAAAACCGTTGAGCGTCTACGGTTACTCAAAATTCCTGTTTGATGAATATGTTCGTCAAATCCTGCCTGAAG                                   <  SRR4302543.7323301/94‑1 (MQ=60)
                                                           TTTATTGAATCCCGCGAGTACGAAAAACCGTTGAGCGTCTACGGTTACTCAAAATTCCTGTTTGATGAATATGTTCGTCAAATCCTGCCTGAAG                                   >  SRR4302543.6163139/1‑94 (MQ=60)
                                                           TTTATTGAATCCCGCGAGTACGAAAAACCGTTGAGCGTCTACGGTTACTCAAAATTCCTGTTTGATGAATATGTTCGTCAAATCCTGCCTGAAG                                   <  SRR4302543.1217834/94‑1 (MQ=60)
                                                            TTATTGAATCCCGCGAGTACGAAAAACCGTTGAGCGTCTACGGTTACTCAAAATTCCTGTTTGATGAATATGTTCGTCAAATCCTGCCTGAAGC                                  <  SRR4302543.6664608/94‑1 (MQ=60)
                                                            TTATTGAATCCCGCGAGTACGAAAAACCGTTGAGCGTCTACGGTTACTCAAAATTCCTGTTTGATGAATATGTTCGTCAAATCCTGCCTGAAGC                                  <  SRR4302543.4775917/94‑1 (MQ=60)
                                                             TATTGAATCCCGCGAGTACGAAAAACCGTTGAGCGTCTACGGTTACTCAAAATTCCTGTTTGATGAATATGTTCGTCAAATCCTGCCTGAAGCG                                 <  SRR4302543.3265295/94‑1 (MQ=60)
                                                               TTGAATCCCGCGAGTACGAAAAACCGTTGAGCGTCTACGGTTACTCAACATTCCAGTTTGATGAATATGTTCGTCAAATCCTGCCTGAAGCGAA                               >  SRR4302543.5461140/1‑94 (MQ=60)
                                                               TTGAATCCCGCGAGTACGAAAAACCGTTGAGCGTCTACGGTTACTCAAAATTCCTGTTTGATGAATATGTTCGTCAAATCCTGCCTGAAGCGAA                               <  SRR4302543.857886/94‑1 (MQ=60)
                                                                TGAATCCCGCGAGTACGAAAAACCGTTGAGCGTCTACGGTTACTCAAAATTCCTGTTTGATGAATATGTTCGTCAAATCCTGCCTGAAGCGAAC                              >  SRR4302543.1758448/1‑94 (MQ=60)
                                                                TGAATCCCGCGAGTACGAAAAACCGTTGAGCGTCTACGGTTACTCAAAATTCCTGTTTGATGAATATGTTCGTCAAATCCTGCCTGAAGCGAAC                              <  SRR4302543.6843293/94‑1 (MQ=60)
                                                                TCAATCCCGCGAGTGCGAAAAACCGTTGATCGCCTACGGTGACTCAAAATTCCTGTTTGAGGAATATGTTCGTCAAATCCTGCCTGAAGCGAAC                              <  SRR4302543.3576957/94‑1 (MQ=60)
                                                                 GAATCCCGCGAGTACGAAAAACCGTTGAGCGTCTACGGTTACTCAAAATTCCTGTTTGATGAATATGTTCGTCAAATCCTGCCTGAAGCGAACT                             <  SRR4302543.1105321/94‑1 (MQ=60)
                                                                  AATCCCGCGAGTACGAAAAACCGTTGAGCGTCTACGGTTACTCAAAATTCCTGTTTGATGAATATGTTCGTCAAATCCTGCCTGAAGCGAACTC                            >  SRR4302543.7194361/1‑94 (MQ=60)
                                                                  AATCCCGCGAGTACGAAAAACCGTTGAGCGTCTACGGTTACTCAAAATTCCTGTTTGATGAATATGTTCGTCAAATCCTGCCTGAAGCGAACTC                            <  SRR4302543.2930804/94‑1 (MQ=60)
                                                                  AATCCCGCGAGTACGAAAAACCGTTGAGCGTCTACGGTTACTCAAAATTCCTGTTTGATGAATATGTTCGTCAAATCCTGCCTGAAGCGAACTC                            <  SRR4302543.3243380/94‑1 (MQ=60)
                                                                  AATCCCGCCAGTACGAAAAACCGTTGAGCCGCGACGGTTACTCAAAATTCCTGTTTGATGAAGATGTTCGTCAAATCCTGCCTGAAGCGAACTC                            <  SRR4302543.3243381/94‑1 (MQ=60)
                                                                   ATCCCGCGAGTACGAAAAACCGTTGAGCGTCTACGGTTACTCAAAATTCCTGTTTGATGAATATGTTCGTCAAATCCTGCCTGAAGCGAACTCG                           >  SRR4302543.4843883/1‑94 (MQ=60)
                                                                    TCCCGCGAGTACGAAAAACCGTTGAGCGTCTACGGTTACTCAAAATTCCTGTTTGATGAATATGTTCGTCAAATCCTGCCTGAAGCGAACTCGC                          >  SRR4302543.7474005/1‑94 (MQ=60)
                                                                     CCCGCGAGTACGAAAAACCGTTGAGCGTCTACGGTTACTCAAAATTCCTGTTTGATGAATATGTTCGTCAAATCCTGCCTGAAGCGAACTCGCA                         >  SRR4302543.5357582/1‑94 (MQ=60)
                                                                     CCCGCGAGTACGAAAAACCGTTGAGCGTCTACGGTTACTCAAAATTCCTGTTTGATGAATATGTTCGTCAAATCCTGCCTGAAGCGAACTCGCA                         >  SRR4302543.785999/1‑94 (MQ=60)
                                                                      CCGCGAGTACGAAAAACCGTTGAGCGTCTACGGTTACTCAAAATTCCTGTTTGATGAATATGTTCGTCAAATCCTGCCTGAAGCGAACTCGCAG                        <  SRR4302543.706205/94‑1 (MQ=60)
                                                                      CCGCGAGTACGAAAAACCGTTGAGCGTCTACGGTTACTCAAAATTCCTGTTTGATGAATATGTTCGTCAAATCCTGCCTGAAGCGAACTCGCAG                        <  SRR4302543.810767/94‑1 (MQ=60)
                                                                       CGCGAGTACGAAAAACCGTTGAGCGTCTACGGTTACTCAAAATTCCTGTTTGATGAATATGTTCGTCAAATCCTGCCTGAAGCGAACTCGCAGA                       >  SRR4302543.5931351/1‑94 (MQ=60)
                                                                        GCGAGTACGAAAAACCGTTGAGCGTCTACGGTTACTCAAAATTCCTGTTTGATGAATATGTTCGTCAAATCCTGCCTGAAGCGAACTCGCAGAT                      <  SRR4302543.7250210/94‑1 (MQ=60)
                                                                        GCGAGTACGAAAAACCGTTGAGCGTCTACGGTTACTCAAAATTCCTGTTTGATGAATATGTTCGTCAAATCCTGCCTGAAGCGAACTCGCAGAT                      <  SRR4302543.291703/94‑1 (MQ=60)
                                                                         CGAGTACGAAAAACCGTTGAGCGTCTACGGTTACTCAAAATTCCTGTTTGATGAATATGTTCGTCAAATCCTGCCTGAAGCGAACTCGCAGATT                     <  SRR4302543.6407365/94‑1 (MQ=60)
                                                                         CGAGTACGAAAAACCGTTGAGCGTCTACGGTTACTCAAAATTCCTGTTTGATGAATATGTTCGTCAAATCCTGCCTGAAGCGAACTCGCAGATT                     <  SRR4302543.3672/94‑1 (MQ=60)
                                                                         CGAGTACGAAAAACCGTTGAGCGTCTACGGTTACTCAAAATTCCTGTTTGATGAATATGTTCGTCAAATCCTGCCTGAAGCGAACTCGCAGATT                     >  SRR4302543.843236/1‑94 (MQ=60)
                                                                         CGAGTACGAAAAACCGTTGAGCGTCTACGGTTACTCAAAATTCCTGTTTGATGAATATGTTCGTCAAATCCTGCCTGAAGCGAACTCGCAGATT                     >  SRR4302543.5216836/1‑94 (MQ=60)
                                                                          GAGTACGAAAAACCGTTGAGCGTCTACGGTTACTCAAAATTCCTGTTTGATGAATATGTTCGTCAAATCCTGCCTGAAGCGAACTCGCAGATTG                    <  SRR4302543.1420782/94‑1 (MQ=60)
                                                                          GAGTACGAAAAACCGTTGAGCGTCTACGGTTACTCAAAATTCCTGTTTGATGAATATGTTCGTCAAATCCTGCCTGAAGCGAACTCGCAGATTG                    >  SRR4302543.5882395/1‑94 (MQ=60)
                                                                           AGTACGAAAAACCGTTGAGCGTCTACGGTTACTCAAAATTCCTGTTTGATGAATATGTTCGTCAAATCCTGCCTGAAGCGAACTCGCAGATTGT                   <  SRR4302543.6819620/94‑1 (MQ=60)
                                                                            GTACGAAAAACCGTTGAGCGTCTACGGTTACTCAAAATTCCTGTTTGATGAATATGTTCGTCAAATCCTGCCTGAAGCGAACTCGCAGATTGTT                  >  SRR4302543.1618700/1‑94 (MQ=60)
                                                                            GTACGAAAAACCGTTGAGCGTCTACGGTTACTCAAAATTCCTGTTTGATGAATATGTTCGTCAAATCCTGCCTGAAGCGAACTCGCAGATTGTT                  >  SRR4302543.1396953/1‑94 (MQ=60)
                                                                            GTACGAAAAACCGTTGAGCGTCTACGGTTACTCAAAATTCCTGTTTGATGAATATGTTCGTCAAATCCTGCCTGAAGCGAACTCGCAGATTGTT                  <  SRR4302543.6738158/94‑1 (MQ=60)
                                                                             TACGAAAAACCGTTGAGCGTCTACGGTTACTCAAAATTCCTGTTTGATGAATATGTTCGTCAAATCCTGCCTGAAGCGAACTCGCAGATTGTTG                 >  SRR4302543.1635456/1‑94 (MQ=60)
                                                                             TACGAAAAACCGTTGAGCGTCTACGGTTACTCAAAATTCCTGTTTGATGAATATGTTCGTCAAATCCTGCCTGAAGCGAACTCGCAGATTGTTG                 <  SRR4302543.3397794/94‑1 (MQ=60)
                                                                             TACGAAAAACCGTTGAGCGTCTACGGTTACTCAAAATTCCTGTTTGATGAATATGTTCGTCAAATCCTGCCTGAAGCGAACTCGCAGATTGTTG                 <  SRR4302543.3079555/94‑1 (MQ=60)
                                                                             TACGAAAAACCGTTGAGCGTCTACGGTTACTCAAAATTCCTGTTTGATGAATATGTTCGTCAAATCCTGCCTGAAGCGAACTCGCAGATTGTTG                 <  SRR4302543.2017748/94‑1 (MQ=60)
                                                                              ACGAAAAACCGTTGAGCGTCTACGGTTACTCAAAATTCCTGTTTGATGAATATGTTCGTCAAATCCTGCCTGAAGCGAACTCGCAGATTGTTGG                <  SRR4302543.6142138/94‑1 (MQ=60)
                                                                               CGAAAAACCGTTGAGCGTCTACGGTTACTCAAAATTCCTGTTTGATGAATATGTTCGTCAAATCCTGCCTGAAGCGAACTCGCAGATTGTTGGC               >  SRR4302543.5401405/1‑94 (MQ=60)
                                                                                 AAAAACCGTGGAGCGTCTACGGTTACTCAAAATTCCTGTTTGATGAATATGTTCGTCAAATCCTGCCTGAAGCGAACTCGCAGATTGTTGGCTT             <  SRR4302543.7171022/94‑1 (MQ=60)
                                                                                  AAAACCGTTGAGCGTCTACGGTTACTCAAAATTCCTGTTTGATGAATATGTTCGTCAAATCCTGCCTGAAGCGAACTCGCAGATTGTTGGCTTC            <  SRR4302543.5715687/94‑1 (MQ=60)
                                                                                  AAAACCGTTGAGCGTCTACGGTTACTCAAAATTCCTGTTTGATGAATATGTTCGTCAAATCCTGCCTGAAGCGAACTCGCAGATTGTTGGCTTC            <  SRR4302543.2988586/94‑1 (MQ=60)
                                                                                   AAACCGTTGAGCGTCTACGGTTACTCAAAATTCCTGTTTGATGAATATGTTCGTCAAATCCTGCCTGAAGCGAACTCGCAGATTGTTGGCTTCC           >  SRR4302543.1009878/1‑94 (MQ=60)
                                                                                   AAACCGTTGAGCGTCTACGGTTACTCAAAATTCCTGTTTGATGAATATGTTCGTCAAATCCTGCCTGAAGCGAACTCGCAGATTGTTGGCTTCC           <  SRR4302543.4644142/94‑1 (MQ=60)
                                                                                    AACCGTTGAGCGTCTACGGTTACTCAAAATTCCTGTTTGATGAATATGTTCGTCAAATCCTGCCTGAAGCGAACTCGCAGATTGTTGGCTTCCG          <  SRR4302543.1867605/94‑1 (MQ=60)
                                                                                    AACCGTTGAGCGTCTACGGTTACTCAAAATTCCTGTTTGATGAATATGTTCGTCAAATCCTGCCTGAAGCGAACTCGCAGATTGTTGGCTTCCG          >  SRR4302543.1973123/1‑94 (MQ=60)
                                                                                    AACCGTTGAGCGTCTACGGTTACTCAAAATTCCTGTTTGATGAATATGTTCGTCAAATCCTGCCTGAAGCGAACTCGCAGATTGTTGGCTTCCG          <  SRR4302543.3775732/94‑1 (MQ=60)
                                                                                    AACCGTTGAGCGTCTACGGTTACTCAAAATTCCTGTTTGATGAATATGTTCGTCAAATCCTGCCTGAAGCGAACTCGCAGATTGTTGGCTTCCG          <  SRR4302543.850409/94‑1 (MQ=60)
                                                                                     ACCGTTGAGCGTGTACGGTTACTCAAAATTCCTGTTTGATGAATATGTTCGTCAAATCCTGCCTGAAGCGAACTCGCAGATTGTTGGCTTCCGT         <  SRR4302543.6406112/94‑1 (MQ=60)
                                                                                     ACCGTTGAGCGTCTACGGTTACTCAAAATTCCTGTTTGATGAATATGTTCGTCAAATCCTGCCTGAAGCGAACTCGCAGATTGTTGGCTTCCGT         >  SRR4302543.2753427/1‑94 (MQ=60)
                                                                                     ACCGTTGAGCGTCTACGGTTACTCAAAATTCCTGTTTGATGAATATGTTCGTCAAATCCTGCCTGAAGCGAACTCGCAGATTGTTGGCTTCCGT         <  SRR4302543.7386215/94‑1 (MQ=60)
                                                                                     ACCGTTGAGCGTCTACGGTTACTCAAAATTCCTGTTTGATGAATATGTTCGTCAAATCCTGCCTGAAGCGAACTCGCAGATTGTTGGCTTCCGT         <  SRR4302543.5817612/94‑1 (MQ=60)
                                                                                     ACCGTTGAGCGTCTACGGTTACTCAAAATTCCTGTTTGATGAATATGTTCGTCAAATCCTGCCTGAAGCGAACTCGCAGATTGTTGGCTTCCGT         >  SRR4302543.4481138/1‑94 (MQ=60)
                                                                                      CCGTTGAGCGTCTACGGTTACTCAAAATTCCTGTTTGATGAATATGTTCGTCAAATCCTGCCTGAAGCGAACTCGCAGATTGTTGGCTTCCGTT        <  SRR4302543.5778210/94‑1 (MQ=60)
                                                                                       CGTTGAGCGTCTACGGTTACTCAAAATTCCTGTTTGATGAATATGTTCGTCAAATCCTGCCTGAAGCGAACTCGCAGATTGTTGGCTTCCGTTA       >  SRR4302543.4964543/1‑94 (MQ=60)
                                                                                       CGTTGAGCGTCTACGGGTACTCAAAATTCCTGTTTGATGAATATGTTCGTCAAATCCTGCCTGAAGCGAACTCGCAGATTGTTGGCTTCCGTTA       >  SRR4302543.2054054/1‑94 (MQ=60)
                                                                                       CGTTGAACGTCTACGGTTACTCAAAATTCCTGTTTGATGAATATGTTCGTCAAATCCTGCCTGAAGCGAACTCGCAGATTGTTGGCTTCCGTTA       >  SRR4302543.7617858/1‑94 (MQ=60)
                                                                                        GTTGAGCGTCTACGGTTACTCAAAATTCCTGTTTGATGAATATGTTCGTCAAATCCTGCCTGAAGCGAACTCGCAGATTGTTGGCTTCCGTTAT      >  SRR4302543.4762107/1‑94 (MQ=60)
                                                                                        GTTGAGCGTCTACGGTTACTCAAAATTCCTGTTTGATGAATATGTTCGTCAAATCCTGCCTGAAGCGAACTCGCAGATTGTTGGCTTCCGTTAT      <  SRR4302543.3211538/94‑1 (MQ=60)
                                                                                          TGAGCGTCTACGGTTACTCAAAATTCCTGTTTGATGAATATGTTCGTCAAATCCTGCCTGAAGCGAACTCGCAGATTGTTGGCTTCCGTTATTT    <  SRR4302543.2099784/94‑1 (MQ=60)
                                                                                          TGAGCGTCTACGGTTACTCAAAATTCCTGTTTGATGAATATGTTCGTCAAATCCTGCCTGAAGCGAACTCGCAGATTGTTGGCTTCCGTTATTT    >  SRR4302543.2101229/1‑94 (MQ=60)
                                                                                          TGAGCGTCTACGGTTACTCAAAATTCCTGTTTGATGAATATGTTCGTCAAATCCTGCCTGAAGCGAACTCGCAGATTGTTGGCTTCCGTTATTT    <  SRR4302543.6121418/94‑1 (MQ=60)
                                                                                          TGAGCGTCTACGGTTACTCAAAATTCCTGTTTGATGAATATGTTCGTCAAATCCTGCCTGAAGCGAACTCGCAGATTGTTGGCTTCCGTTATTT    <  SRR4302543.6121417/94‑1 (MQ=60)
                                                                                           GAGCGTCTACGGTTACTTAAAATTCCTGTTCGATGAATATGTTCGTCAAATCCTGCCTGAAGCGAACTCGCAGATTGTTGGCTTCCGTTATTTC   <  SRR4302543.198115/94‑1 (MQ=60)
                                                                                           GAGCGTCTACGGTTACTCAAAATTCCTGTTTGATGAATATGTTCGTCAAATCCTGCCTGAAGCGAACTCGCAGATTGTTGGCTTCCGTTATTTC   >  SRR4302543.7975924/1‑94 (MQ=60)
                                                                                           GAGCGTCTACGGTTACTCAAAATTCCTGTTTGATGAATATGTTCGTCAAATCCTGCCTGAAGCGAACTCGCAGATTGTTGGCTTCCGTTATTTC   <  SRR4302543.4449647/94‑1 (MQ=60)
                                                                                            AGCGTCTACGGTTACTCAAAATTCCTGTTTGATGAATATGTTCGTCAAATCCTGCCTGAAGCGAACTCGCAGATTGTTGGCTTCCGTTATTTCA  >  SRR4302543.3157773/1‑94 (MQ=60)
                                                                                             |                                                                                            
GTGAAATCCCGTTCCTGTACGCTTCTTCCGCAGCCACCTACGGCGGACGCACCTCCGACTTTATTGAATCCCGCGAGTACGAAAAACCGTTGAACGTCTACGGTTACTCAAAATTCCTGTTTGATGAATATGTTCGTCAAATCCTGCCTGAAGCGAACTCGCAGATTGTTGGCTTCCGTTATTTCA  >  NC_000913/3791933‑3792118

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 2 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑