Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A1 F1 I1 R1 1696 279.3 15874187 97.8% 15524954 93.0

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 3,793,037 A→G Q161R (CAG→CGG)  rfaF → ADP‑heptose‑‑lps heptosyltransferase II

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009133,793,0370AG99.8% 1432.0 / ‑5.4 454Q161R (CAG→CGG) rfaFADP‑heptose‑‑lps heptosyltransferase II
Reads supporting (aligned to +/- strand):  ref base A (1/0);  new base G (220/233);  total (221/233)
Fisher's exact test for biased strand distribution p-value = 4.87e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 4.14e-01

Only 100 of 471 total aligned reads displayed.

TGGTGGAACGCTATATAGCGCTGGCCTATGACAAAGGCATTATGCGCACAGCACAAGATCTGCCGCAGCCATTGTTATGGCCGCAGTTGCAGGTGAGCGAAGGTGAAAAATCATATACCTGTAATCAATTTTCGCTTTCATCAGAACGTCCGATGATTGGTTTTTGCCCGGGTGCGGAGT  >  NC_000913/3792947‑3793126
                                                                                          |                                                                                         
tggtggAGCGCTATATAGCGCTGGCCTATGACAAAGGCATTATGCGCACAGCACAAGATCTGCCGCAGCCATTGTTATGGCCGCAGTTGCggg                                                                                         >  2:7759875/1‑93 (MQ=255)
tggtggAACGCTATATAGCGCTGGCCTATGACAAAGGCATTATGCGCACAGCACAAGATCTGCCGCAGCCATTGTTATGGCCGCAGTTGCggg                                                                                         <  2:4460910/93‑1 (MQ=255)
tggtggAACGCTATATAGCGCTGGCCTATGACAAAGGCATTATGCGCACAGCACAAGATCTGCCGCAGCCATTGTTATGGCCGCAGTTGCggg                                                                                         <  2:2257602/93‑1 (MQ=255)
 ggtggAACGCTATATAGCGCTGGCCTATGACAAAGGCATTATGCGCACAGCACAAGATCTGCCGCAGCCATTGTTATGGCCGCAGTTGCGGGt                                                                                        >  2:7353568/1‑93 (MQ=255)
  gtggAACGCTATATAGCGCTGGCCTATGACAAAGGCATTATGCGCACAGCACAAGATCTGCCGCAGCCATTGTTATGGCCGCAGTTGCGGGTg                                                                                       <  2:3253962/93‑1 (MQ=255)
     gAACGCTATATAGCGCTGGCCTATGACAAAGGCATTATGCGCACAGCACAAGATCTGCCGCAGCCATTGTTATGGCCGCAGTTGCGGGTGAGc                                                                                    <  1:1903464/93‑1 (MQ=255)
     gAACGCTATATAGCGCTGGCCTATGACAAAGGCATTATGCGCACAGCACAAGATCTGCCGCAGCCATTGTTATGGCCGCAGTTGCGGGTGAGc                                                                                    <  1:4553145/93‑1 (MQ=255)
      aaCGCTATATAGCGCTGGCCTATGACAAAGGCATTATGCGCACAGCACAAAATCTGCCACAGCCATTGTTATGGCCGCAGTTGCGGGTGAGCg                                                                                   >  1:3747075/1‑93 (MQ=255)
       aCGCTATATAGCGCTGGCCTATGACAAAGGCATTATGCGCACAGCACAAGATCTGCCGCAGCCATTGTTATGGCCGCAGTTGCGGGTGAGCGa                                                                                  <  2:3655113/93‑1 (MQ=255)
       aCGCTATATAGCGCTGGCCTATGACAAAGGCATTATGCGCACAGCACAAGATCTGCCGCAGCCATTGTTATGGCCGCAGTTGCGGGTGAGCGa                                                                                  <  1:2385743/93‑1 (MQ=255)
        cGCTATATAGCGCTGGCCTATGACAAAGGCATTATGCGCACAGCACAAGATCTGCCGCAGCCATTGTTATGGCCGCAGTTGCGGGTGAGCGaa                                                                                 <  2:3111716/93‑1 (MQ=255)
         gCTATATAGCGCTGGCCTATGACAAAGGCATTATGCGCACAGCACAAGATCTGCCGCAGCCATTGTTATGGCCGCAGTTGCGGGTGAGCGAAg                                                                                <  1:6951945/93‑1 (MQ=255)
         gCTATATAGCGCTGGCCTATGACAAAGGCATTATGCGCACAGCACAAGATCTGCCGCAGCCATTGTTATGGCCGCAGTTGCGGGTGAGCGAAg                                                                                >  1:1711803/1‑93 (MQ=255)
          cTATATAGCGCTGGCCTATGACAAAGGCATTATGCGCACAGCACAAGATCTGCCGCAGCCATTGTTATGGCCGCAGTTGCGGGTGAGCGAAgg                                                                               >  2:4778030/1‑93 (MQ=255)
          cTATATAGCGCTGGCCTATGACAAAGGCATTATGCGCACAGCACAAGATCTGCCGCAGCCATTGTTATGGCCGCAGTTGCGGGTGAGCGAAgg                                                                               <  2:2644690/93‑1 (MQ=255)
           tatataGCGCTGGCCTATGACAAAGGCATTATGCGCACAGCACAAGATCTGCCGCAGCCATTGTTATGGCCGCAGTTGCGGGTGAGCGAAggg                                                                              >  2:3403179/1‑92 (MQ=255)
           tatataGCGCTGGCCTATGACAAAGGCATTATGCGCACAGCACAAGATCTGCCGCAGCCATTGTTATGGCCGCAGTTGCGGGTGAGCGAAggg                                                                              >  1:2207066/1‑92 (MQ=255)
            atataGCGCTGGCCTATGACAAAGGCATTATGCGCACAGCACAAGATCTGCCGCAGCCATTGTTATGGCCGCAGTTGCGGGTGAGCGAAGGTg                                                                             <  2:2329441/93‑1 (MQ=255)
             tataGCGCTGGCCTATGACAAAGGCATTATGCGCACAGCACAAGATCTGCCGCAGCCATTGTTATGGCCGCAGTTGCGGGTGAGCGAAGGTGa                                                                            >  1:1337733/1‑93 (MQ=255)
             tataGCGCTGGCCTATGACAAAGGCATTATGCGCACAGCACAAGATCTGCCGCAGCCATTGTTATGGCCGCAGTTGCGGGTGAGCGAAGGTGa                                                                            <  1:3304020/93‑1 (MQ=255)
                 gcgcGGGCCTATGACAAAGGCATTATGCGCACAGCACAAGATCTGCCGCAGCCATTGTTATGGCCGCAGTTGCGGGTGAGCGAAGGTGaaaaa                                                                        <  1:3663171/93‑1 (MQ=255)
                   gcTGGCCTATGACAAAGGCATTATGCGCACAGCACAAGATCTGCCGCAGCCATTGTTATGGCCGCAGTTGCGGGTGAGCGAAGGTGAAAAATc                                                                      <  1:2550173/93‑1 (MQ=255)
                     tGGCCTATGACAAAGGCATTATGCGCACAGCACAAGATCTGCCGCAGCCATTGTTATGGCCGCAGTTGCGGGTGAGCGAAGGTGAAAAATCat                                                                    >  1:1098975/1‑93 (MQ=255)
                     tGGCCTATGACAAAGGCATTATGCGCACAGCACAAGATCTGCCGCAGCCATTGTTATGGCCGCAGTTGCGGGTGAGCGAAGGTGAAAAATCat                                                                    >  2:5325367/1‑93 (MQ=255)
                      ggCCTATGACAAAGGCATTATGCGCACAGCACAAGATCTGCCGCAGCCATTGTTATGGCCGCAGTTGCGGGTGAGCGAAGGTGAAAAATCata                                                                   >  1:1182568/1‑93 (MQ=255)
                      ggCCTATGACAAAGGCATTATGCGCACAGCACAAGATCTGCCGCAGCCATTGTTATGGCCGCAGTTGCGGGTGAGCGAAGGTGAAAAATCata                                                                   >  1:3938825/1‑93 (MQ=255)
                        cttATGACAAAGACATTATGAGCACAGCACAAGATCTGCCGCAGCCATTGTTATGGCCGCAGTTGCGGGTGAGCGAAGGTGAAAAATCatatg                                                                 <  2:1294519/91‑2 (MQ=255)
                        ccTATGACAAAGGCATTATGCGCACAGCACAAGATCTGCCGCAGCCATTGTTATGGCCGCAGTTGCGGGTGAGCGAAGGTGAAAAATCAtata                                                                 <  1:345435/93‑1 (MQ=255)
                         cTATGACAAAGGCATTATGCGCACAGCACAAGATCTGCCGCAGCCATTGTTATGGCCGCAGTTGCGGGTGAGCGAAGGTGAAAAATCATATAc                                                                >  2:810655/1‑93 (MQ=255)
                         cTATGACAAAGGCATTATGCGCACAGCACAAGATCTGCCGCAGCCATTGTTATGGCCGCAGTTGCGGGTGAGCGAAGGTGAAAAATCATATAc                                                                <  1:5970682/93‑1 (MQ=255)
                          tATGACAAAGGCATTATGCGCACAGCACAAGATCTGCCGCAGCCATTGTTATGGCCGCAGTTGCGGGTGAGCGAAGGTGAAAAATCATATAcc                                                               >  1:5484299/1‑93 (MQ=255)
                          tATGACAAAGGCATTATGCGCACAGCACAAGATCTGCCGCAGCCATTGTTATGGCCGCAGTTGCGGGTGAGCGAAGGTGAAAAATCATATAcc                                                               >  2:5264386/1‑93 (MQ=255)
                           aTGACAAAGGCATTATGCGCACAGCACAAGATCTGCCGCAGCCATTGTTATGGCCGCAGTTGCGGGTGAGCGAAGGTGAAAAATCATATACCt                                                              >  2:6134670/1‑93 (MQ=255)
                           aTGACAAAGGCATTATGCGCACAGCACAAGATCTGCCGCAGCCATTGTTATGGCCGCAGTTGCGGGTGAGCGAAGGTGAAAAATCATATACCt                                                              >  2:5570540/1‑93 (MQ=255)
                            tGACAAAGGCATTATGCGCACAGCACAAGATCTGCCGCAGCCATTGTTATGGCCGCAGTTGCGGGTGAGCGAAGGTGAAAAATCATATACCTg                                                             >  2:6702351/1‑93 (MQ=255)
                               cAAAGGCATTATGCGCAGAGCACAAGATCTGCCGCAGCCATTGTTATGGCCGCAGTTGCGGGTGTGCTAAGGTGAAAAATCATATACCTGTaa                                                          >  2:5446082/1‑93 (MQ=255)
                               cAAAGGCATTATGCGCACAGCACAAGATCTGCCGCAGCCATTGTTATGGCCGCAGTTGCGGGTGAGCGAAGGTGAAAAATCATATACCTGTaa                                                          >  1:4497164/1‑93 (MQ=255)
                               cAAAGGCATTATGCGCACAGCACAAGATCTGCCGCAGCCATTGTTATGGCCGCAGTTGCGGGTGAGCGAAGGTGAAAAATCATATACCTGTaa                                                          >  2:1839985/1‑93 (MQ=255)
                                aaaGGCATTATGCGCACAGCACAAGATCTGCCGCAGCCATTGTTATGGCCGCAGTTGCGGGTGAGCGAAGGTGAAAAATCATATACCTGTAAt                                                         >  2:5728725/1‑93 (MQ=255)
                                aaaGGCATTATGCGCACAGCACAAGATCTGCCGCAGCCATTGTTATGGCCGCAGTTGCGGGTGAGCGAAGGTGAAAAATCATATACCTGTAAt                                                         >  1:3801012/1‑93 (MQ=255)
                                aaaGGCATTATGCGCACAGCACAAGATCTGCCGCAGCCATTGTTATGGCCGCAGTTGCGGGTGAGCGAAGGTGAAAAATCATATACCTGTAAt                                                         <  2:2832120/93‑1 (MQ=255)
                                aaaGGCATTATGCGCACAGCACAAGATCTGCCGCAGCCATTGTTATGGCCGCAGTTGCGGGTGAGCGAAGGTGAAAAATCATATACCTGTAAt                                                         >  2:7216275/1‑93 (MQ=255)
                                aaaGGCATTATGCGCACAGCACAAGATCTGCCGCAGCCATTGTTATGGCCGCAGTTGCGGGTGAGCGAAGGTGAAAAATCATATACCTGTAAt                                                         <  1:4170249/93‑1 (MQ=255)
                                 aaGGCATTATGCGCACAGCACAAGATCTGCCGCAGCCATTGTTATGGCCGCAGTTGCGGGTGAGCGAAGGTGAAAAATCATATACCTGTAATc                                                        >  1:1381421/1‑93 (MQ=255)
                                   ggCATTATGCGCACAGCACAAGATCTGCCGCAGCCATTGTTATGGCCGCAGTTGCGGGTGAGCGAAGGGGAAAAATCATATACCTGTAATCaa                                                      >  2:5060127/1‑93 (MQ=255)
                                     cATTATGCGCACAGCACAAGATCTGCCGCAGCCATTGTTATGGCCGCAGTTGCGGGTGAGCGAAGGTGAAAAATCATATACCTGTAATCAAtt                                                    <  2:2862960/93‑1 (MQ=255)
                                      aTTATGCGCACAGCACAAGATCTGCCGCAGCCATTGTTATGGCCGCAGTTGCGGGTGAGCGAAGGTGAAAAATCATATACCTGTAATCAAttt                                                   >  1:6813189/1‑93 (MQ=255)
                                      aTTATGCGCACAGCACAAGATCTGCCGCAGCCATTGTTATGGCCGCAGTTGCGGGTGAGCGAAGGTGAAAAATCATATACCTGTAATCAAttt                                                   >  2:1579697/1‑93 (MQ=255)
                                       ttATGCGCACAGCACAAGATCTGCCGCAGCCATTGTTATGGCCGCAGTTGCGGGTGAGCGAAGGTGAAAAATCATATACCTGTAATCAAtttt                                                  >  2:437772/1‑93 (MQ=255)
                                       ttATGCGCACAGCACAAGATCTGCCGCAGCCATTGTTATGGCCGCAGTTGCGGGTGAGCGAAGGTGAAAAATCATATACCTGTAATCAAtttt                                                  >  1:7400785/1‑93 (MQ=255)
                                        tATGCGCACAGCACAAGATCTGCCGCAGCCATTGTTATGGCCGCAGTTGCGGGTGAGCGAAGGTGAAAAATCATATACCTGTAATCAATTTTc                                                 >  2:6522256/1‑93 (MQ=255)
                                        tATGCGCACAGCACAAGATCTGCCGCAGCCATTGTTATGGCCGCAGTTGCGGGTGAGCGAAGGTGAAAAATCATATACCTGTAATCAATTTTc                                                 <  1:6064508/93‑1 (MQ=255)
                                           gcgcACAGCACAAGATCTGCCGCAGCCATTGTTATGGCCGCAGTTGCGGGTGAGCGAAGGTGAAAAATCATATACCTGTAATCAATTTTCGCt                                              <  2:871241/93‑1 (MQ=255)
                                           gcgcACAGCACAAGATCTGCCGCAGCCATTGTTATGGCCGCAGTTGCGGGTGAGCGAAGGTGAAAAATCATATACCTGTAATCAATTTTCGCt                                              >  2:7557765/1‑93 (MQ=255)
                                            cgcACAGCACAAGATCTGCCGCAGCCATTGTTATGGCCGCAGTTGCGGGTGAGCGAAGGTGAAAAATCATATACCTGTAATCAATTTTCGCtt                                             <  2:4228875/93‑1 (MQ=255)
                                            cgcACAGCACAAGATCTGCCGCAGCCATTGTTATGGCCGCAGTTGCGGGTGAGCGAAGGTGAAAAATCATATACCTGTAATCAATTTTCGCtt                                             <  2:4053007/93‑1 (MQ=255)
                                             gcacagcacaAGATCTGCCGCAGCCATTGTTATGGCCGCAGTTGCGGGTGAGCGAAGGTGAAAAATCATATACCTGTAATCAATTTTCGCttt                                            <  1:838269/93‑1 (MQ=255)
                                             gcacagcacaAGATCTGCCGCAGCCATTGTTATGGCCGCAGTTGCGGGTGAGCGAAGGTGAAAAATCATATACCTGTAATCAATTTTCGCttt                                            >  2:4550931/1‑93 (MQ=255)
                                               acagcacaAGATCTGCCGCAGCCATTGTTATGGCCGCAGTTGCGGGTGAGCGAAGGTGAAAAATCATATACCTGTAATCAATTTTCGCTTtca                                          >  2:3914625/1‑93 (MQ=255)
                                                cagcacaAGATCTGCCGCAGCCATTGTTATGGCCGCAGTTGCGGGTGAGCGAAGGTGAAAAATCATATACCTGTAATCAATTTTCGCTTtcat                                         <  1:4381348/93‑1 (MQ=255)
                                                 agcacaAGATCTGCCGCAGCCATTGTTATGGCCGCAGTTGCGGGTGTGCGAAGGTGAAAAATCATATACCTGTAATCAATTTTCGCTTtcatc                                        >  2:4673028/1‑93 (MQ=255)
                                                  gcacaAGATCTGCCGCAGCCATTGTTATGGCCGCAGTTGCGGGTGAGCGAAGGTGAAAAATCATATACCTGTAATCAATTTTCGCTTtcatca                                       <  1:2940204/93‑1 (MQ=255)
                                                  gcacaAGATCTGCCGCAGCCATTGTTATGGCCGCAGTTGCGGGTGAGCGAAGGTGAAAAATCATATACCTGTAATCAATTTTCGCTTtcatca                                       <  1:723203/93‑1 (MQ=255)
                                                     caAGATCTGCCGCAGCCATTGTTATGGCCGCAGTTGCGGGTGAGCGAAGGTGAAAAATCATATACCTGTAATCAATTTTCGCTTTCATCAGaa                                    >  2:3526591/1‑93 (MQ=255)
                                                     caAGATCTGCCGCAGCCATTGTTATGGCCGCAGCTGCGGGTGAGCGAAGGTGAAAAATCATATACCTGTAATCAATTTTCGCTTTCATCAGaa                                    >  1:2880166/1‑93 (MQ=255)
                                                      aaGATCTGCCGCAGCCATTGTTATGGCCGCAGTTGCGGGTGAGCGAAGGTGAAAAATCATATACCTGTAATCAATTTTCGCTTTCATCAGAAc                                   <  1:3055948/93‑1 (MQ=255)
                                                       aGATCTGCCGCAGCCATTGTTATGGCCGCAGTTGCGGGTGAGCGAAGGTGAAAAATCATATACCTGTAATCAATTTTCGCTTTCATCAGAACg                                  >  2:1019992/1‑93 (MQ=255)
                                                       aGATCTGCCGCAGCCATTGTTATGGCCGCAGTTGCGGGTGAGCGAAGGTGAAAAATCATATACCTGTAATCAATTTTCGCTTTCATCAGAACg                                  <  1:7097558/93‑1 (MQ=255)
                                                         aTCTGCCGCAGCCATTGTTATGGCCGCAGTTGCGGGTGAGCGAAGGTGAAAAATCATATACCTGTAATCAATTTTCGCTTTCATCAGAACGTc                                <  1:2104857/93‑1 (MQ=255)
                                                         aTCTGCCGCAGCCATTGTTATGGCCGCAGTTGCGGGTGAGCGAAGGTGAAAAATCATATACCTGTAATCAATTTTCGCTTTCATCAGAACGTc                                <  1:6492719/93‑1 (MQ=255)
                                                           cTGCCGCAGCCATTGTTATGGCCGCAGTTGCGGGTGAGCGAAGGTGAAAAATCATATACCTGTAATCAATTTTCGCTTTCATCAGAACGTCCg                              >  1:1483696/1‑93 (MQ=255)
                                                             gCCGCAGCCATTGTTATGGCCGCAGTTGCGGGTGAGCGAAGGTGAAAAATCATATACCTGTAATCAATTTTCGCTTTCATCAGAACGTCCgat                            >  1:5422402/1‑93 (MQ=255)
                                                             gCCGCAGCCATTGTTATGGCCGCAGTTGCGGGTGAGCGAAGGTGAAAAATCATATACCTGTAATCAATTTTCGCTTTCATCAGAACGTCCgat                            >  1:6154529/1‑93 (MQ=255)
                                                             gCCGCAGCCATTGTTATGGCCGCAGTTGCGGGTGAGCGAAGGAGAAAAATCATATACCTGTAATCAATTTTCGCTTTCATCAGAACGTCCgat                            >  1:175835/1‑93 (MQ=255)
                                                                gCAGCCATTGTGATGGCCGCAGTTGCGGGTGAGCGAAGGTGAAAAATCATATACCTGTAATCAATTTTCGCTTTCATCAGAACGTCCgatgat                         <  1:6367887/93‑1 (MQ=255)
                                                                 cAGCCATTGTTATGGCCGCAGTTGCGGGTGAGCGAAGGTGAAAAATCATATACCTGTAATCAATTTTCGCTTTCATCAGAACGTCCGATGAtt                        <  2:137386/93‑1 (MQ=255)
                                                                 cAGCCATTGTTATGGCCGCAGTTGCGGGTGAGCGAAGGTGAAAAATCATATACCTGTAATCAATTTTCGCTTTCATCAGAACGTCCGATGAtt                        <  1:5220740/93‑1 (MQ=255)
                                                                 cAGCCATTGTTATGGCCGCAGTTGCGGGTGAGCGAAGGTGAAAAATCATATACCTGTAATCAATTTTCGCTTTCATCAGAACGTCCGATGAtt                        <  1:1543773/93‑1 (MQ=255)
                                                                  aGCCATTGTTATGGCCGCAGTTGCGGGTGAGCGAAGGTGAAAAATCATATACCTGTAATCAATTTTCGCTTTCATCAGAACGTCCGATGATTg                       <  2:7096192/93‑1 (MQ=255)
                                                                   gCCATTGTTATGGCCGCAGTTGCGGGTGAGCGAAGGTGAAAAATCATATACCTGTAATCAATTTTCGCTTTCATCAGAACGTCCGATGATTgg                      >  1:4052788/1‑93 (MQ=255)
                                                                     cATTGTTATGGCCGCAGTTGCGGGTGAGCGAAGGTGAAAAATCATATACCTGTAATCAATTTTCGCTTTCATCAGAACGTCCGATGATTGGtt                    >  1:5637824/1‑93 (MQ=255)
                                                                     cATTGTTATGGCCGCAGTTGCGGGTGAGCGAAGGTGAAAAATCATATACCTGGAATCAATTTTCGCTTTCATCAGAACGTCCGATGATTGGtt                    >  2:1651967/1‑93 (MQ=255)
                                                                      aTTGTTATGGCCGCAGTTGCGGGTGAGCGAAGGTGAAAAATCATATACCTGTAATCAATTTTCGCTTTCATCAGAACGTCCGATGATTGGttt                   <  1:4861943/93‑1 (MQ=255)
                                                                      aTTGTTATGGCCGCAGTTGCGGGTGAGCGAAGGTGAAAAATCATATACCTGTAATCAATTTTCGCTTTCATCAGAACGTCCGATGATTGGttt                   <  2:6307925/93‑1 (MQ=255)
                                                                       ttGTTATGGCCGCAGTTGCGGGTGAGCGAAGGTGAAAAATCATATACCTGTAATCAATTTTCGCTTTCATCAGAACGTCCGATGATTGGtttt                  >  2:4967556/1‑93 (MQ=255)
                                                                       ttGTTATGGCCGCAGTTGCGGGTGAGCGAAGGTGAAAAATCATATACCTGTAATCAATTTTCGCTTTCATCAGAACGTCCGATGATTGGtttt                  <  1:5013261/93‑1 (MQ=255)
                                                                       ttGTTATGGCCGCAGTTGCGGGTGAGCGAAGGTGAAAAATCATATACCTGTAATCAATTTTCGCTGTCATCAGAACGTCCGATGATTGGtttt                  >  1:7569840/1‑93 (MQ=255)
                                                                          ttATGGCCGCAGTTGCGGGTGAGCGAAGGTGAAAAATCATATACCTGTAATCAATTTTCGCTTTCATCAGAACGTCCGATGATTGGTTTTTGc               >  1:5763759/1‑93 (MQ=255)
                                                                          ttATGGCCGCAGTTGCGGGTGAGCGAAGGTGAAAAATCATATACCTGTAATCAATTTTCGCTTTCATCAGAACGTCCGATGATTGGTTTTTGc               >  2:2431213/1‑93 (MQ=255)
                                                                           tATGGCCGCAGTTGCGGGTGAGCGAAGGTGAAAAATCATATACCTGTAATCAATTTTCGCTTTCATCAGAACGTCCGATGATTGGTTTTTGcc              <  1:2614881/93‑1 (MQ=255)
                                                                            aTGGCCGCAGTTGCGGGTGAGCGAAGGTGAAAAATCATATACCTGTAATCAATTTTCGCTTTCATCAGAACGTCCGATGATTGGTTTTTGccc             >  1:2257388/1‑93 (MQ=255)
                                                                             tGGCCGCAGTTGCGGGTGAGCGAAGGTGAAAAATCATATACCTGTAATCAATTTTCGCTTTCATCAGAACGTCCGATGATTGGTTTTTGCCCg            <  2:6376532/93‑1 (MQ=255)
                                                                              ggCCGCAGTTGCGGGTGAGCGAAGGTGAAAAATCATATACCTGTAATCAATTTTCGCTTTCATCAGAACGTCCGATGATTGGTTTTTGCCCgg           >  1:3014580/1‑93 (MQ=255)
                                                                              ggCCGCAGTTGCGGGTGAGCGAAGGTGAAAAATCATATACCTGTAATCAATTTTCGCTTTCATCAGAACGTCCGATGATTGGTTTTTGCCCgg           <  1:312892/93‑1 (MQ=255)
                                                                               gCCGCAGTTGCGGGTGAGCGAAGGTGAAAAATCATATACCTGTAATCAATTTTCGCTTTCATCAGAACGTCCGATGATTGGTTTTTGCCCggg          <  2:587199/93‑1 (MQ=255)
                                                                               gCCGCAGTTGCGGGTGAGCGAAGGTGAAAAATCATATACCTGTAATCAATTTTCGCTTTCATCAGAACGTCCGATGATTGGTTTTTGCCCggg          >  1:6631479/1‑93 (MQ=255)
                                                                               gCCGCAGTTGCAGGTGAGCGAAGGTGAAAAATCATATACCTGTAATCAATTTTCGCTTTCATCAGAACGTCCGATGATTGGTTTTTGCCCggg          >  2:1140844/1‑93 (MQ=255)
                                                                                ccGCAGTTGCGGGTGAGCGAAGGTGAAAAATCATATACCTGTAATCAATTTTCGCTTTCATCAGAACGTCCGATGATTGGTTTTTGCCCGGGt         <  1:4287146/93‑1 (MQ=255)
                                                                                   cAGTTGCGGGTGAGCGAAGGTGAAAAATCATATACCTGTAATCAATTTTCGCTTTCATCAGAACGTCCGATGATTGGTTTTTGCCCGGGTGCg      >  1:3225335/1‑93 (MQ=255)
                                                                                      ttGCGGGTGAGCGAAGGTGAAAAATCATATACCTGTAATCAATTTTCGCTTTCATCAGAACGTCCGATGATTGGTTTTTGCCCGGGTGCGGAg   <  1:785918/93‑1 (MQ=255)
                                                                                          |                                                                                         
TGGTGGAACGCTATATAGCGCTGGCCTATGACAAAGGCATTATGCGCACAGCACAAGATCTGCCGCAGCCATTGTTATGGCCGCAGTTGCAGGTGAGCGAAGGTGAAAAATCATATACCTGTAATCAATTTTCGCTTTCATCAGAACGTCCGATGATTGGTTTTTGCCCGGGTGCGGAGT  >  NC_000913/3792947‑3793126

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

BRESEQ :: bam2aln output Only 200 of 268 total aligned reads displayed.
TAATGGTGGAACGCTATATAGCGCTGGCCTATGACAAAGGCATTATGCGCACAGCACAAGATCTGCCGCAGCCATTGTTATGGCCGCAGTTGCAGGTGAGCGAAGGTGAAAAATCATATACCTGTAATCAATTTTCGCTTTCATCAGAACGTCCGATGATTGGTTTTTGCCCGGGTGCGGAGTTTGG  >  NC_000913/3792944‑3793130
                                                                                             |                                                                                             
TAATGGTGGAACGCTATATAGCGCTGGCCTATGACAAAGGCATTATGCGCACAGCACAAGATCTGCCGCAGCCATTGTTATGGCCGCAGTTGCG                                                                                               <  SRR4302543.3489742/94‑1 (MQ=60)
TAATGGTGGAACGCTATATAGCGCTGGCCTATGACAAAGGCATTATGCGCACAGCACAAGATCTGCCGCAGCCATTGTTATGGCCGCAGTTGCG                                                                                               <  SRR4302543.4878154/94‑1 (MQ=60)
 AATGGTGGAACGCTATATAGCGCTGGCCTATGACAAAGGCATTATGCGCACAGCACAAGATCTGCCGCAGCCATTGTTATGGCCGCAGTTGCGG                                                                                              <  SRR4302543.4267014/94‑1 (MQ=60)
  ATGGTGGAACGCTATATAGCGCTGGCCTATGACAAAGGCATTATGCGCACAGCACAAGATCTGCCGCAGCCATTGTTATGGCCGCAGTTGCGGG                                                                                             >  SRR4302543.2627005/1‑94 (MQ=60)
  ATGGTGGAACGCTATATAGCGCTGGCCTATGACAAAGGCATTATGCGCACAGCACAAGATCTGCCGCAGCCATTGTTATGGCCGCAGTTGCGGG                                                                                             <  SRR4302543.6314104/94‑1 (MQ=60)
   TGGTGGAACGCTATATAGCGCTGGCCTATGACAAAGGCATTATGCGCACAGCACAAGATCTGCCGCAGCCATTGTTATGGCCGCAGTTGCGGGT                                                                                            <  SRR4302543.3445533/94‑1 (MQ=60)
     GTGGAACGCTATATAGCGCTGGCCTATGACAAAGGCATTATGCGCACAGCACAAGATCTGCCGCAGCCATTGTTATGGCCGCAGTTGCGGGTGA                                                                                          >  SRR4302543.3243335/1‑94 (MQ=60)
     GTGGAACGCTATATAGCGCTGGCCTATGACAAAGGCATTATGCGCACAGCACAAGATCTGCCGCAGCCATTGTTATGGCCGCAGTTGCGGGTGA                                                                                          <  SRR4302543.3089369/94‑1 (MQ=60)
     GTGGAACGCTATATAGCGCTGGCCTATGACAAAGGCATTATGCGCACAGCACAAGATCTGCCGCAGCCATTGTTATGGCCGCAGTTGCGGGTGA                                                                                          <  SRR4302543.5838986/94‑1 (MQ=60)
      TGGAACGCTATATAGCGCTGGCCTATGACAAAGGCATTATGCGCACAGCACAAGATCTGCCGCAGCCATTGTTATGGCCGCAGTTGCGGGTGAG                                                                                         >  SRR4302543.7088065/1‑94 (MQ=60)
       GGAACGCTATATAGCGCTGGCCTATGACAAAGGCATTATGCGCACAGCACAAGATCTGCCGCAGCCATTGTTATGGCCGCAGTTGCGGGTGAGC                                                                                        <  SRR4302543.4347838/94‑1 (MQ=60)
       GGAACGCTATATAGCGCTGGCCTATGACAAAGGCATTATGCGCACAGCACAAGATCTGCCGCAGCCATTGTTATGGCCGCAGTTGCGGGTGAGC                                                                                        <  SRR4302543.1417959/94‑1 (MQ=60)
        GAACGCTATATAGCGCTGGCCTATGACAAAGGCATTATGCGCACAGCACAAGATCTGCCGCAGCCATTGTTATGGCCGCAGTTGCGGGTGAGCG                                                                                       <  SRR4302543.1920595/94‑1 (MQ=60)
        GAACGCTATATAGCGCTGGCCTATGACAAAGGCATTATGCGCACAGCACAAGATCTGCCGCAGCCATTGTTATGGCCGCAGTTGCGGGTGAGCG                                                                                       <  SRR4302543.5481867/94‑1 (MQ=60)
        GAACGCTATATAGCGCTGGCCTATGACAAAGGCATTATGCGCACAGCACAAGATCTGCCGCAGCCATTGTTATGGCCGCAGTTGCGGGTGAGCG                                                                                       <  SRR4302543.4594606/94‑1 (MQ=60)
        GAACGCTATATAGCGCTGGCCTATGACAAAGGCATTATGCGCACAGCACAAGATCTGCCGCAGCCATTGTTATGGCCGCAGTTGCGGGTGAGCG                                                                                       <  SRR4302543.3561283/94‑1 (MQ=60)
         AACGCTATATAGCGCTGGCCTATGACAAAGGCATTATGCGCACAGCACAAGATCTGCCGCAGCCATTGTTATGGCCGCAGTTGCGGGTGAGCGA                                                                                      >  SRR4302543.3877212/1‑94 (MQ=60)
          ACGCTATATAGCGCTGGCCTATGACAAAGGCATTATGCGCACAGCACAAGATCTGCCGCAGCCATTGTTATGGCCGCAGTTGCGGGTGAGCGAA                                                                                     <  SRR4302543.2407341/94‑1 (MQ=60)
           CGCTATATAGCGCTGGCCTATGACAAAGGCATTATGCGCACAGCACAAGATCTGCCGCAGCCATTGTTATGGCCGCAGTTGCGGGTGAGCGAAG                                                                                    <  SRR4302543.3716394/94‑1 (MQ=60)
           CGCTATATAGCGCTGGCCTATGACAAAGGCATTATGCGCACAGCACAAGATCTGCCGCAGCCATTGTTATGGCCGCAGTTGCGGGTGAGCGAAG                                                                                    >  SRR4302543.1727108/1‑94 (MQ=60)
           CGCTATATAGCGCTGGCCTATGACAAAGGCATTATGCGCACAGCACAAGATCTGCCGCAGCCATTGTTATGGCCGCAGTTGCGGGTGAGCGAAG                                                                                    <  SRR4302543.4587989/94‑1 (MQ=60)
           CGCTATATAGCGCTGGCCTATGACAAAGGCATTATGCGCACAGCACAAGATCTGCCGCAGCCATTGTTATGGCCGCAGTTGCGGGTGAGCGAAG                                                                                    <  SRR4302543.2985982/94‑1 (MQ=60)
            GCTATATAGCGCTGGCCTATGACAAAGGCATTATGCGCACAGCACAAGATCTGCCGCAGCCATTGTTATGGCCGCAGTTGCGGGTGAGCGAAGG                                                                                   >  SRR4302543.548561/1‑94 (MQ=60)
             CTATATAGCGCTGGCCTATGACAAAGGCATTATGCGCACAGCACAAGATCTGCCGCAGCCATTGTTATGGCCGCAGTTGCGGGTGAGCGAAGGT                                                                                  <  SRR4302543.4668225/94‑1 (MQ=60)
             CTATATAGCGCTGGCCTATGACAAAGGCATTATGCGCACAGCACAAGATCTGCCGCAGCCATTGTTATGGCCGCAGTTGCGGGTGAGCGAAGGT                                                                                  >  SRR4302543.5778005/1‑94 (MQ=60)
             CTATATAGCGCTGGCCTATGACAAAGGCATTATGCGCACAGCACAAGATCTGCCGCAGCCATTGTTATGGCCGCAGTTGCGGGTGAGCGAAGGT                                                                                  >  SRR4302543.6106550/1‑94 (MQ=60)
             CTATATAGCGCTGGCCTATGACAAAGGCATTATGCGCACAGCACAAGATCTGCCGCAGCCATTGTTATGGCCGCAGTTGCGGGTGAGCGAAGGG                                                                                  >  SRR4302543.2226945/1‑94 (MQ=60)
              TATATAGCGCTGGCCTATGACAAAGGCATTATGCGCACAGCACAAGATCTGCCGCAGCCATTGTTATGGCCGCAGTTGCGGGTGAGCGAAGGTG                                                                                 <  SRR4302543.5306895/94‑1 (MQ=60)
               ATATAGCGCTGGCCTATGACAAAGGCATTATGCGCACAGCACAAGATCTGCCGCAGCCATTGTTATGGCCGCAGTTGCGGGTGAGCGACGGTGA                                                                                >  SRR4302543.1373767/1‑94 (MQ=60)
               ATATAGCGCTGGCCTATGACAAAGGCATTATGCGCACAGCACAAGATCTGCCGCAGCCATTGTTATGGCCGCAGTTGCGGGTGAGCGAAGGTGA                                                                                >  SRR4302543.1373768/1‑94 (MQ=60)
               ATATAGCGCTGGCCTATGACAAAGGCATTATGCGCACAGCACAAGATCTGCCGCAGCCATTGTTATGGCCGCAGTTGCGGGTGAGCGAAGGTGA                                                                                >  SRR4302543.1349665/1‑94 (MQ=60)
                TATAGCGCTGGCCTATGACAAAGGCATTATGCGCACAGCACAAGATCTGCCGCAGCCATTGTTATGGCCGCAGTTGCGGGTGAGCGAAGGTGAA                                                                               <  SRR4302543.3333829/94‑1 (MQ=60)
                TATAGCGCTGGCCTATGACAAAGGCATTATGCGCACAGCACAAGATCTGCCGCAGCCATTGTTATGGCCGCAGTTGCGGGTGAGCGAAGGTGAA                                                                               >  SRR4302543.2378595/1‑94 (MQ=60)
                 ATAGCTCTGGCCTATGACAAAGGCATTATGCGCACAGCACAAGATCTGCCGCAGCCATTGTTATGGCCGCAGTTGCGGGTGAGCGAAGGTGAAA                                                                              <  SRR4302543.1342787/94‑1 (MQ=60)
                 ATAGCGCTGGCCTATGACAAAGGCATTATGCGCACAGCACAAGATCTGCCGCAGCCATTGTTATGGCCGCAGTTGCGGGTGAGCGAAGGTGAAA                                                                              <  SRR4302543.1342788/94‑1 (MQ=60)
                  TAGCGCTGGCCTATGACAAAGGCATTATGCGCACAGCACAAGATCTGCCGCAGCCATTGTTATGGCCGCAGTTGCGGGTGAGCGAAGGTGAAAA                                                                             <  SRR4302543.1366239/94‑1 (MQ=60)
                   AGCGCTGGCCTATGACAAAGGCATTATGCGCACAGCACAAGATCTGCCGCAGCCATTGTTATGGCCGCAGTTGCGGGTGAGCGAAGGTGAAAAA                                                                            <  SRR4302543.4336967/94‑1 (MQ=60)
                    GCGCTGGCCTATGACAAAGGCATTATGCGCACAGCACAAGATCTGCCGCAGCCATTGTTATGGCCGCAGTTGCGGGTGAGCGAAGGTGAAAAAT                                                                           <  SRR4302543.452915/94‑1 (MQ=60)
                    GCGCTGGCCTATGACAAAGGCATTATGCGCACAGCACAAGATCTGCCGCAGCCATTGTTATGGCCGCAGTTGCGGGTGAGCGAAGGTGAAAAAT                                                                           <  SRR4302543.7098593/94‑1 (MQ=60)
                    GCGCGGGCCTATGACAAAGGCATTATGCGCACAGCACAAGATCTGCCGCAGCCATTGTTATGGCCGCAGTTGCGGGTGAGCGAAGGTGAAAAAT                                                                           <  SRR4302543.3695341/94‑1 (MQ=60)
                     CGCTGGCCTATGACAAAGGCATTATGCGCACAGCACAATATCTGCCGCAGCCATTGTTATGGCCGCAGTTGCGGGTGAGCGAAGGTTAAAAATC                                                                          >  SRR4302543.7103965/1‑94 (MQ=60)
                     CGCTGGCCTATGACAAAGGCATTATGCGCACAGCACAAGATCTGCCGCAGCCATTGTTATGGCCGCAGTTGCGGGTGAGCGAAGGTGAAAAATC                                                                          <  SRR4302543.7592229/94‑1 (MQ=60)
                     CGCTGGCCTATGACAAAGGCATTATGCGCACAGCACAAGATCTGCCGCAGCCATTGTTATGGCCGCAGTTGCGGGTGAGCGAAGGTGAAAAATC                                                                          <  SRR4302543.2327407/94‑1 (MQ=60)
                      GCTGGCCTGTGACAAAGGCATTATGCGCACAGCACAAGATCTGCCGCAGCCATTGTTATGGCCGCAGTTGCGGGTGAGCGAAGGTGAAAAATCA                                                                         <  SRR4302543.2444894/94‑1 (MQ=60)
                      GCTGGCCTATGACAAAGGCATTATGCGCACAGCACAAGATCTGCCGCAGCCATTGTTATGGCCGCAGTTGCGGGTGAGCGAAGGTGAAAAATCA                                                                         <  SRR4302543.2573463/94‑1 (MQ=60)
                       CTGGCCTATGACAAAGGCATTATGCGCACAGCACAAGATCTGCCGCAGCCATTGTTATGGCCGCAGTTGCGGGTGAGCGAAGGTGAAAAATCAT                                                                        >  SRR4302543.1108874/1‑94 (MQ=60)
                       CTGGCCTATGACAAAGGCATTATGCGCACAGCACAAGATCTGCCGCAGCCATTGTTATGGCCGCAGTTGCGGGTGAGCGAAGGTGAAAAATCAT                                                                        <  SRR4302543.1444663/94‑1 (MQ=60)
                        TGGTCTAGGACAAAGGCATGATGCGCACAGCACAAGATCTGCCGCAGCCATTGTTATGGCCGCAGTTGCGGGTGAGCGAAGGTGAAAAATCATA                                                                       <  SRR4302543.2252056/94‑1 (MQ=60)
                        TGGCCTATGACAAAGGCATTATGCGCACAGCACAAGATCTGCCGCAGCCATTGTTATGGCCGCAGTTGCGGGTGAGCGAAGGTGAACAATCATA                                                                       >  SRR4302543.7408239/1‑94 (MQ=60)
                        TGGCCTATGACAAAGGCATTATGCGCACAGCACAAGATCTGCCGCAGCCATTGTTATGGCCGCAGTTGCGGGTGAGCGAAGGTGAAAAATCATA                                                                       >  SRR4302543.1467829/1‑94 (MQ=60)
                        TGGCCTATGACAAAGGCATTATGCGCACAGCACAAGATCTGCCGCAGCCATTGTTATGGCCGCAGTTGCGGGTGAGCGAAGGTGAAAAATCATA                                                                       >  SRR4302543.3973642/1‑94 (MQ=60)
                        TGGCCTATGACAAAGGCATTATGCGCACAGCACAAGATCTGCCGCAGCCATTGTTATGGCCGCAGTTGCGGGTGAGCGAAGGTGAAAAATCATA                                                                       >  SRR4302543.1202510/1‑94 (MQ=60)
                        TGGCCTATGACAAAGGCATTATGCGCACAGCACAAGATCTGCCGCAGCCATTGTTATGGCCGCAGTTGCGGGTGAGCGAAGGTGAAAAATCATA                                                                       >  SRR4302543.1193255/1‑94 (MQ=60)
                         GGCCTATGACAAAGGCATTATGCGCACAGCACAAGATCTGCCGCAGCCATTGTTATGGCCGCAGTTGCGGGTGAGCGAAGGTGAAAAATCATAT                                                                      <  SRR4302543.741906/94‑1 (MQ=60)
                         GGCCTATGACAAAGGCATTATGCGCACAGCACAAGATCTGCCGCAGCCATTGTTATGGCCGCAGTTGCGGGTGAGCGAAGGTGAAAAATCATAT                                                                      <  SRR4302543.2157538/94‑1 (MQ=60)
                         GGCCTATGACAAAGGCATTATGCGCACAGCACAAGATCTGCCGCAGCCATTGTTATGGCCGCAGTTGCGGGTGAGCGAAGGTGAAAAATCATAT                                                                      <  SRR4302543.5326353/94‑1 (MQ=60)
                         GGCCTATGACAAAGGCATTATGCGCACAGCACAAGATCTGCCGCAGCCATTGTTATGGCCGCAGTTGCGGGTGAGCGAAGGTGAAAAATCATAT                                                                      <  SRR4302543.2157539/94‑1 (MQ=60)
                         GGCCTATGACAAAGGCATTATGCGCACAGCACAAGATCTGCCGCAGCCATTGTTATGGCCGCAGTTGCGGGTGAGCGAAGGTGAAAAATCATAT                                                                      <  SRR4302543.4918385/94‑1 (MQ=60)
                          GCCTATGACAAAGGCATTATGCGCACAGCACAAGATCTGCCGCAGCCATTGTTATGGCCGCAGTTGCGGGTGAGCGAAGGTGAAAAATCATATA                                                                     <  SRR4302543.5485862/94‑1 (MQ=60)
                          GCCTATGACAAAGGCATTATGCGCACAGCACAAGATCTGCCGCAGCCATTGTTATGGCAGCAGTTGCGGGTGAGCGAAGGTGAAAAATCATATA                                                                     >  SRR4302543.6077084/1‑94 (MQ=60)
                           CCTATGACAAAGGCATTATGCGCACAGCACAAGATCTGCCGCAGCCATTGTTATGGCCGCAGTTGCGGGTGAGCGAAGGTGAAAAATCATATAC                                                                    >  SRR4302543.3044085/1‑94 (MQ=60)
                           CCTATGACAAAGGCATTATGCGCACAGCACAAGATCTGCCGCAGCCATTGTTATGGCCGCAGTTGCGGGTGAGCGAAGGTGAAAAATCATATAC                                                                    <  SRR4302543.2911756/94‑1 (MQ=60)
                            CTATGACAAAGGCATTATGCGCACAGCACAAGATCTGCCGCAGCCATTGTTATGGCCGCAGTTGCGGGTGAGCGAAGGTGAAAAATCATATACC                                                                   >  SRR4302543.3076246/1‑94 (MQ=60)
                            CTATGACAAAGGCATTATGCGCACAGCACAAGATCTGCCGCAGCCATTGTTATGGCCGCAGTTGCGGGTGAGCGAAGGTGAAAAATCATATACC                                                                   <  SRR4302543.6066595/94‑1 (MQ=60)
                            CTATGACAAAGGCATTATGCGCACAGCACAAGATCTGCCGCAGCCATTGTTATGGCCGCAGTTGCGGGTGAGCGAAGGTGAAAAATCATATACC                                                                   >  SRR4302543.5534014/1‑94 (MQ=60)
                            CTATGACAAAGGCATTATGCGCACAGCACAAGATCTGCCGCAGCCATTGTTATGGCCGCAGTTGCGGGTGAGCGAAGGTGAAAAATCATATACC                                                                   >  SRR4302543.2777393/1‑94 (MQ=60)
                             TATGACAAAGGCATTATGCGCACAGCACAAGATCTGCCGCAGCCATTGTTATGGCCGCAGTTGCGGGTGAGCGAAGGTGAAAAATCATATACCT                                                                  <  SRR4302543.404257/94‑1 (MQ=60)
                              ATGACAAAGGCATTATGCGCACAGCACAAGATCTGCCGCAGCCATTGTTATGGCCGCAGTTGCGGGTGAGCGAAGGTGAAAAATCATATACCTG                                                                 >  SRR4302543.1498297/1‑94 (MQ=60)
                              ATGACAAAGGCATTATGCGCACAGCACAAGATCTGCCGCAGCCATTGTTATGGCCGCAGTTGCGGGTGAGCGAAGGTGAAAAATCATATACCTG                                                                 >  SRR4302543.6422062/1‑94 (MQ=60)
                              ATGACAAAGGCATTATGCGCACAGCACAAGATCTGCCGCAGCCATTGTTATGGCCGCAGTTGCGGGTGAGCGAAGGTGAAAAATCATATACCTG                                                                 <  SRR4302543.4545127/94‑1 (MQ=60)
                               TGACAAAGGCATTATGCGCACAGCACAAGATCTGCCGCAGCCATTGTTATGGCCGCAGTTGCGGGTGAGCGAAGGTGAAAAATCATATACCTGT                                                                <  SRR4302543.1649928/94‑1 (MQ=60)
                               TGACAAAGGCATTATGCGCACAGCACAAGATCTGCCGCAGCCATTGTTATGGCCGCAGTTGCGGGTGAGCGAAGGTGAAAAATCATATACCTGT                                                                >  SRR4302543.392326/1‑94 (MQ=60)
                               TGACAAAGGCATTATGCGCACAGCACAAGATCTGCCGCAGCCATTGTTATGGCCGCAGTTGCGGGTGAGCGAAGGTGAAAAATCATATACCTGT                                                                >  SRR4302543.4057731/1‑94 (MQ=60)
                                GACAAAGGCATTATGCGCACAGCACAAGATCTGCCGCAGCCATTGTTATGGCCGCAGTTGCGGGTGAGCGAAGGTGAAAAATCATATACCTGTA                                                               >  SRR4302543.2691254/1‑94 (MQ=60)
                                 ACAAAGGCATTATGCGCACAGCACAAGATCTGCCGCAGCCATTGTTATGGCCGCAGTTGCGGGTGAGCGAAGGTGAAAAATCATATACCTGTAA                                                              >  SRR4302543.4538034/1‑94 (MQ=60)
                                  CAAAGGCATTATGCGCACAGCACAAGATCTGCCGCAGCCATTGTTATGGCCGCAGTTGCGGGTGAGCGAAGGTGAAAAATCATATACCTGTAAT                                                             <  SRR4302543.2860109/94‑1 (MQ=60)
                                  CAAAGGCATTATGAGCACAGCACAAGATCTGCCGCAGCCATTGTTATGGCCGCAGTTGCGGGTGAGCGAAGGTGAAAAATCATATACCTGTAAT                                                             >  SRR4302543.4939307/1‑94 (MQ=60)
                                   AAAGGCATTATGCGCACAGCACAAGATCTGCCGCAGCCATTGTTATGGCCGCAGTTGCGGGTGAGCGAAGGTGAAAAATCATATACCTGTAATC                                                            <  SRR4302543.4208009/94‑1 (MQ=60)
                                    AAGGCATTATGCGCACAGCACAAGATCTGCCGCAGCCATTGTTATGGCCGCAGTTGCGGGTGAGCGAAGGTGAAAAATCATATACCTGTAATCA                                                           >  SRR4302543.3788090/1‑94 (MQ=60)
                                    AAGGCATTATGCGCACAGCACAAGATCTGCCGCAGCCATTGTTATGGCCGCAGTTGCGGGTGAGCGAAGGTGAAAAATCATATACCTGTAATCA                                                           >  SRR4302543.1168175/1‑94 (MQ=60)
                                     AGGCATTATGCGCACAGCACAAGATCTGCCGCAGCCATTGTTATGGCCGCAGTTGCGGGTGAGCGAAGGTGAAAAATCATATACCTGTAATCAA                                                          >  SRR4302543.376901/1‑94 (MQ=60)
                                     AGGCATTATGCGCACAGCACAAGATCTGCCGCAGCCATTGTTATGGCCGCAGTTGCGGGTGAGCGAAGGTGAAAAATCATATACCTGTAATCAA                                                          >  SRR4302543.2956023/1‑94 (MQ=60)
                                      GGCATTATGCGCACAGCACAAGATCTGCCGCAGCCATTGTTATGGCCGCAGTTGCGGGTGAGCGAAGGTGAAAAATCATATACCTGTAATCAAT                                                         >  SRR4302543.2965472/1‑94 (MQ=60)
                                       GCATTATGCGCACAGCCCAAGATCTGCCGCAGCCATTGTTATGGCCGCAGTTGCGGGTGAGCGAAGGTGAAAAATCATATACCTGTAATCAATT                                                        <  SRR4302543.1514681/94‑1 (MQ=60)
                                       GCATTATGCGCACAGCACAAGATCTGCCGCAGCCATTGTTATGGCCGCAGTTGCGGGTGAGCGAAGGTGAAAAATCATATACCTGTAATCAATT                                                        <  SRR4302543.7989809/94‑1 (MQ=60)
                                       GCATTATGCGCACAGCACAAGATCTGCCGCAGCCATTGTTATGGCCGCAGTTGCGGGTGAGCGAAGGTGAAAAATCATATACCTGTAATCAATT                                                        >  SRR4302543.2690928/1‑94 (MQ=60)
                                        CATTATGCGCACAGCACAAGATCTGCCGCAGCCATTGTTATGGCCGCAGTTGCGGGTGAGCGAAGGTGAAAAATCATATACCTGTAATCAATTT                                                       <  SRR4302543.543125/94‑1 (MQ=60)
                                        CATTATGCGCACAGCACAAGATCTGCCGCAGCCATTGTTATGGCCGCAGTTGCGGGTGAGCGAAGGTGAAAAATCATATACCTGTAATCAATTT                                                       >  SRR4302543.4684265/1‑94 (MQ=60)
                                        CATTATGCGCACAGCACAAGATCTGCCGCAGCCATTGTTATGGCCGCAGTTGCGGGTGAGCGAAGGTGAAAAATCATATACCTGTAATCAATTT                                                       <  SRR4302543.986781/94‑1 (MQ=60)
                                        CATTATGCGCACAGCACAAGATCTGCCGCAGCCATTGTTATGGCCGCAGTTGCGGGTGAGCGAAGGTGAAAAATCATATACCTGTAATCAATTT                                                       >  SRR4302543.6877509/1‑94 (MQ=60)
                                         ATTATGCGCACAGCACAAGATCTGCCGCAGCCATTGTTATGGCCGCAGTTGCGGGTGAGCGAAGGTGAAAAATCATATACCTGTAATCAATTTT                                                      >  SRR4302543.1776200/1‑94 (MQ=60)
                                         ATTATGCGCACAGCACAAGATCTGCCGCAGCCATTGTTATGGCCGCAGTTGCGGGTGAGCGAAGGTGAAAAATCATATACCTGTAATCAATTTT                                                      >  SRR4302543.7471832/1‑94 (MQ=60)
                                         ATTATGCGCACAGCACAAGATCTGCCGCAGCCATTGTTATGGCCGCAGTTGCGGGTGAGCGAAGGTGAAAAATCATATACCTGTAATCAATTTT                                                      <  SRR4302543.3075058/94‑1 (MQ=60)
                                          TTATGCGCACAGCACAAGATCTGCCGCAGCCATTGTTATGGCCGCAGTTGCGGGTGAGCGAAGGTGAAAAATCATATACCTGTAATCAATTTTC                                                     <  SRR4302543.3812855/94‑1 (MQ=60)
                                          TTATGCGCACAGCACAAGATCTGCCGCAGCCATTGTTATGGCCGCAGTTGCGGGTGAGCGAAGGTGAAAAATCATATACCTGTAATCAATTTTC                                                     <  SRR4302543.7016325/94‑1 (MQ=60)
                                           tatgcgcatacaaccatagctccgGCAGCCATTGTTATGGCCGCAGTTGCGAGTGAGCGAAGGTGAAAAAGCATATACCTGTAATCAATTTTCG                                                    <  SRR4302543.5188635/70‑1 (MQ=60)
                                           TATGCGCACAGCACAAGATCTGCCGCAGCCATTGTTATGGCCGCAGTTGCGGGTGAGCGAAGGTGAAAAATCATATACCTGTAATCAATTTTCG                                                    <  SRR4302543.6121977/94‑1 (MQ=60)
                                           TATGCGCACAGCACAAGATCTGCCGCAGCCATTGTTATGGCCGCAGTTGCGGGTGAGCGAAGGTGAAAAATCATATACCTGTAATCAATTTTCG                                                    <  SRR4302543.255478/94‑1 (MQ=60)
                                            ATGCGCACAGCACAAGATCTGCCGCAGCCATTGTTATGGCCGCAGTTGCGGGTGAGCGAAGGTGAAAAATCATATACCTGTAATCAATTTTCGC                                                   >  SRR4302543.3761241/1‑94 (MQ=60)
                                             TGCGCACAGCACAAGATCTGCCGCAGCCATTGTTATGGCCGCAGTTGCGGGTGAGCGAAGGTGAAAAATCATATACCTGTAATCAATTTTCGCT                                                  >  SRR4302543.809599/1‑94 (MQ=60)
                                             TGCGCACAGCACAAGATCTGCCGCAGCCATTGTTATGGCCGCAGTTGCGGGTGAGCGAAGGTGAAAAATCATATACCTGTAATCAATTTTCGCT                                                  >  SRR4302543.1571504/1‑94 (MQ=60)
                                                GCACAGCACAAGATCTGCCGCAGCCATTGTTATGGCCGCAGTTGCGGGTGAGCGAAGGTGAAAAATCATATACCTGTAATCAATTTTCGCTTTC                                               >  SRR4302543.2341843/1‑94 (MQ=60)
                                                 CACAGCACAAGATCTGCCGCAGCCATTGTTATGGCCGCAGTTGCGGGTGAGCGAAGGTGAAAAATCATATACCTGTAATCAATTTTCGCTTTCA                                              >  SRR4302543.29921/1‑94 (MQ=60)
                                                  ACAGCACAAGATCTGCCGCAGCCATTGTTATGGCCGCAGTTGCGGGTGAGCGAAGGTGAAAAATCATATACCTGTAATCAATTTTCGCTTTCAT                                             <  SRR4302543.696309/94‑1 (MQ=60)
                                                  ACAGCACAACATCGGCCGCAGCCATTTTTATGGCCGCAGTTGCGGGTGAGAGAAGGTGAAAAATCATATACCTGTAATCAATTTTCGCTTTCAT                                             <  SRR4302543.5724931/94‑1 (MQ=60)
                                                   CAGCACAAGATCTGCCGCAGCCATTGTTATGGCCGCAGTTGCGGGTGAGCGAAGGTGAAAAATCATATACCTGTAATCAATTTTCGCTTTCATC                                            <  SRR4302543.4927252/94‑1 (MQ=60)
                                                   CAGCACAAGATCTGCCGCAGCCATTGTTATGGCCGCAGTTGCGGGTGAGCGAAGGTGAAAAATCATATACCTGTAATCAATTTTCGCTTTCATC                                            <  SRR4302543.4421065/94‑1 (MQ=60)
                                                    ATCACAAGATCTGCCGCAGCCATTGTTATGGCCGCAGTTGCGGGTGAGCGAAGGTGAAAAATCATATACCTGTAATCAATTTTCGCTTTCATCA                                           <  SRR4302543.3283074/94‑1 (MQ=60)
                                                    AGCACAAGATCTGCCGCAGCCATTGTTATGGCCGCAGTTGCGGGTGAGCGAAGGTGAAAAATCATATACCTGTAATCAATTTTCGCTTTCATCA                                           >  SRR4302543.6535506/1‑94 (MQ=60)
                                                    AGCACAAGATCTGCCGCAGCCATTGTTATGGCCGCAGTTGCGGGTGAGCGAAGGTGAAAAATCATATACCTGTAATCAATTTTCGCTTTCATCA                                           <  SRR4302543.5639464/94‑1 (MQ=60)
                                                     GCACAAGATCTGCCGCAGCCATTGTTATGGCCGCAGTTGCGGGTGAGCGAAGGTGAAAAATCATATACCTGTAATCAATTTTCGCTTTCATCAG                                          <  SRR4302543.2966902/94‑1 (MQ=60)
                                                     GCACAAGATCTGCCGCAGCCATTGTTATGGCCGCAGTTGCGGGTGAGCGAAGGTGAAAAATCATATACCTGTAATCAATTTTCGCTTTCATCAG                                          <  SRR4302543.729719/94‑1 (MQ=60)
                                                      CACAAGATCTGCCGCAGCCATTGTTATGGCCGCAGTTGCGGGTGAGCGAAGGTGAAAAATCATATACCTGTAATCAATTTTCGCTTTCATCAGA                                         >  SRR4302543.2110611/1‑94 (MQ=60)
                                                       ACAAGATCTGCCGCAGCCATTGTTATGGCCGCAGTTGCGGGTGAGCGAAGGTGAAAAATCATATACCTGTAATCAATTTTCGCTTTCATCAGAA                                        >  SRR4302543.6001114/1‑94 (MQ=60)
                                                       ACAAGATCTGCCGCAGCCATTGTTATGGCCGCAGCTGCGGGTGAGCGAAGGTGAAAAATCATATACCTGTAATCAATTTTCGCTTTCATCAGAA                                        >  SRR4302543.2906373/1‑94 (MQ=60)
                                                        CAAGATCTGCCGCAGCCATTGTTATGGCCGCAGTTGCGGGTGAGCGAAGGTGAAAAATCATATACCTGTAATCAATTTTCGCTTTCATCAGAAC                                       <  SRR4302543.7607549/94‑1 (MQ=60)
                                                        CAAGATCTGCCGCAGCCATTGTTATGGCCGCAGTTGCGGGTGAGCGAAGGTGAAAAATCATATACCTGTAATCAATTTTCGCTTTCATCAGAAC                                       <  SRR4302543.1942541/94‑1 (MQ=60)
                                                          AGATCTGCCGCAGCCATTGTTATGGCCGCAGTTGCGGGTGAGCGAAGGTGAAAAATCATATACCTGTAATCAATTTTCGCTTTCATCAGAACGT                                     <  SRR4302543.7166474/94‑1 (MQ=60)
                                                           GATCTGCCGCAGCCATTGTTATGGCCGCAGTTGCGGGTGAGCGAAGGTGAAAAATCATATACCTGTAATCAATTTTCGCTTTCATCAGAACGTC                                    <  SRR4302543.3303903/94‑1 (MQ=60)
                                                            gtttggcgaagccagtggTATGGCAGCAGTTGCAGGTGAGCGAAGGTGAAAAATCATATACCCGTAATCAATTTTCGCTTTCATCAGAACGTCC                                   <  SRR4302543.5457955/76‑1 (MQ=60)
                                                            ATCTGCCGCAGCCATTGTTATGGCCGCAGTTGCGGGTGAGCGAAGGTGAAAAATCATATACCTGTAATCAATTTTCGCTTTCATCAGAACGTCC                                   <  SRR4302543.2993108/94‑1 (MQ=60)
                                                              CTGCCGCAGCCATTGTTATGGCCGCAGTTGCGGGTGAGCGAAGGTGAAAAATCATATACCTGTAATCAATTTTCGCTTTCATCAGAACGTCCGA                                 <  SRR4302543.2613376/94‑1 (MQ=60)
                                                               TGCCGCAGCCATTGTTATGGCCGCAGTTGCGGGTGAGCGAAGGTGAAAAATCATATACCTGTAATCAATTTTCGCTTTCATCAGAACGTCCGAT                                <  SRR4302543.4427859/94‑1 (MQ=60)
                                                               TGCCGCAGCCATTGTTATGGCCGCAGTTGCGGGTGAGCGAAGGTGAAAAATCATATACCTGTAATCAATTTTCGCTTTCATCAGAACGTCCGAT                                <  SRR4302543.3181550/94‑1 (MQ=60)
                                                               TGCCGCAGCCATTGTTATGGCCGCAGTTGCGGGTGAGCGAAGGTGAAAAATCATATACCTGTAATCAATTTTCGCTTTCATCAGAACGTCCGAT                                >  SRR4302543.6212789/1‑94 (MQ=60)
                                                               TGCCGCAGCCATTGTTATGGCCGCAGTTGCGGGTGAGCGAAGGTGAAAAATCATATACCTGTAATCAATTTTCGCTTTCATCAGAACGTCCGAT                                <  SRR4302543.4427860/94‑1 (MQ=60)
                                                               TGCCGCAGCCATTGTTATGGCCGCAGTTGCGGGTGAGCGAAGGAGAAAAATCATATACCTGTAATCAATTTTCGCTTTCATCAGAACGTCCGAT                                >  SRR4302543.177342/1‑94 (MQ=60)
                                                                GCTGCAGCCATTGTTATGGCCGCAGTTGCGGGTGAGCGAAGGTGAAAAATCATATACCTGTAATCAATTTTCGCTTTCATCAGAACGTCCGATG                               <  SRR4302543.4644697/94‑1 (MQ=60)
                                                                GCCGCAGCCATTGTTATGGCCGCAGTTGCGGGTGAGCGAAGGTGAAAAATCATATACCTGTAATCAATTTTCGCTTTCATCAGAACGTCCGATG                               <  SRR4302543.3652168/94‑1 (MQ=60)
                                                                GCCGCAGCCATTGTTATGGCCGCAGTTGCGGGTGAGCGAAGGTGAAAAATCATATACCTGTAATCAATTTTCGCTTTCATCAGAACGTCCGATG                               <  SRR4302543.1743688/94‑1 (MQ=60)
                                                                GCCGCAGCCATTGTTATGGCCGCAGTTGCGGGTGAGCGAAGGTGAAAAATCATATACCTGTAATCAATTTTCGCTTTCATCAGAACGTCCGATG                               <  SRR4302543.7262712/94‑1 (MQ=60)
                                                                  CGCAGCCATTGTTATGGCCGCAGTTGCGGGTGAGCGAAGGTGAAAAATCATATACCTGTAATCAATTTTCGCTTTCATCAGAACGTCCGATGAT                             <  SRR4302543.5735218/94‑1 (MQ=60)
                                                                  CGCAGCCATTGTTATGGCCGCAGTTGCGGGTGAGCGAAGGTGAAAAATCATATACCTGTAATCAATTTTCGCTTTCATCAGAACGTCCGATGAT                             >  SRR4302543.1526338/1‑94 (MQ=60)
                                                                  CGCAGCCATTGTTATGGCCGCAGTTGCGGGTGAGCGAAGGTGAAAAATCATATACCTGTAATCAATTTTCGCTTTCATCAGAACGTCCGATGAT                             <  SRR4302543.4147061/94‑1 (MQ=60)
                                                                  CGCAGCCATTGTTATGGCCGCAGTTGCGGGTGAGCGAAGGTGAAAAATCATATACCTGTAATCAATTTTCGCTTTCATCAGAACGTCCGATGAT                             >  SRR4302543.3534596/1‑94 (MQ=60)
                                                                  CGCAGCCATTGTTATGGCCGCAGTTGCGGGTGAGCGAAGGTGAAAAATCATATACCTGTAATCAATTTTCGCTTTCATCAGAACGTCCGATGAT                             <  SRR4302543.4321253/94‑1 (MQ=60)
                                                                  CGCAGCCATTGTTATGGCCGCAGTTGCGGGTGAGCGAAGGTGAAAAATCATATACCTGTAATCAATTTTCGCTTTCATCAGAACGTCCGATGAT                             >  SRR4302543.4210181/1‑94 (MQ=60)
                                                                   GCAGCCATTGTTATGGCCGCAGTTGCGGGTGAGCGAAGGTGAAAAATCATATACCTGTAATCAATTTTCGCTTTCATCAGAACGTCCGATGATT                            >  SRR4302543.252075/1‑94 (MQ=60)
                                                                   GCAGCCATTGTTATGGCCGCAGTTGCGGGTGAGCGAAGGTGAAAAATCATATACCTGTAATCAATTTTCGCTTTCATCAGAACGTCCGATGATT                            <  SRR4302543.5614386/94‑1 (MQ=60)
                                                                   GCAGCCATTGTTATGGCCGCAGTTGCGGGTGAGCGAAGGTGAAAAATCATATACCTGTAATCAATTTTCGCTTTCATCAGAACGTCCGATGATT                            <  SRR4302543.6427778/94‑1 (MQ=60)
                                                                   GCAGCCATTGTGATGGCCGCAGTTGCGGGTGAGCGAAGGTGAAAAATCATATACCTGTAATCAATTTTCGCTTTCATCAGAACGTCCGATGATT                            <  SRR4302543.6427779/94‑1 (MQ=60)
                                                                    CAGCCATTGTTATGGCCGCAGTTGCGGGTGAGCGAAGGTGAAAAATCATATACCTGTAATCAATTTTCGCTTTCATCAGAACGTCCGATGATTG                           <  SRR4302543.5267761/94‑1 (MQ=60)
                                                                    CAGCCATTGTTATGGCCGCAGTTGCGGGTGAGCGAAGGTGAAAAATCATATACCTGTAATCAATTTTCGCTTTCATCAGAACGTCCGATGATTG                           >  SRR4302543.6533979/1‑94 (MQ=60)
                                                                    CAGCCATTGTTATGGCCGCAGTTGCGGGTGAGCGAAGGTGAAAAATCATATACCTGTAATCAATTTTCGCTTTCATCAGAACGTCCGATGATTG                           <  SRR4302543.1967868/94‑1 (MQ=60)
                                                                    CAGCCATTGTTATGGCCGCAGTTGCGGGTGAGCGAAGGTGAAAAATCATATACCTGTAATCAATTTTCGCTTTCATCAGAACGTCCGATGATTG                           <  SRR4302543.1557598/94‑1 (MQ=60)
                                                                     AGCCATTGTTATGGCCGCAGTTGCGGGTGAGCGAAGGTGAAAAATCATATACCTGTAATCAATTTTCGCTTTCATCAGAACGTCCGATGATTGG                          >  SRR4302543.411525/1‑94 (MQ=60)
                                                                     AGCCATTGTTATGGCCGCAGTTGCGGGTGAGCGAAGGTGAAAAATCATATACCTGTAATCAATTTTCGCTTTCATCAGAACGTCCGATGATTGG                          >  SRR4302543.6988883/1‑94 (MQ=60)
                                                                     AGCCATTGTTATGGCCGCAGTTGCGGGTGAGCGAAGGTGAAAAATCATATACCTGTAATCAATTTTCGCTTTCATCAGAACGTCCGATGATTGG                          <  SRR4302543.6567762/94‑1 (MQ=60)
                                                                     AGCCATTGTTATGGCCGCAGTTGCGGGTGAGCGAAGGTGAAAAATCATATACCTGTAATCAATTTTCGCTTTCATCAGAACGTCCGATGATTGG                          >  SRR4302543.3171635/1‑94 (MQ=60)
                                                                     AGCCATTGTTATGGCCGCAGTTGCGGGTGAGCGAAGGTGAAAAACCATATACCTGTAATCAATTTTCGCTTTCATCAGAACGTCCGATGATTGG                          >  SRR4302543.1132180/1‑94 (MQ=60)
                                                                      GCCATTGTTATGGCCGCAGTTGCGGGTGAGCGAAGGTGAAAAATCATATACCTGTAATCAATTTTCGCTTTCATCAGAACGTCCGATGATTGGT                         >  SRR4302543.5904230/1‑94 (MQ=60)
                                                                      GCCATTGTTATGGCCGCAGTTGCGGGTGAGCGAAGGTGAAAAATCATATACCTGTAATCAATTTTCGCTTTCATCAGAACGTCCGATGATTGGT                         >  SRR4302543.4128614/1‑94 (MQ=60)
                                                                       CCATTGTTATGGCCGCAGTTGCGGGTGAGCGAAGGTGAAAAATCATATACCTGTAATCAATTTTCGCTTTCATCAGAACGTCCGATGATTGGTT                        >  SRR4302543.5689216/1‑94 (MQ=60)
                                                                       CCATTGTTATGGCCGCAGTTGCGGGTGAGCGAAGGTGAAAAATCATATACCTGTAATCAATTTTCGCTTTCATCAGAACGTCCGATGATTGGTT                        <  SRR4302543.876407/94‑1 (MQ=60)
                                                                       CCATTGTTATGGCCGCAGTTGCGGGTGAGCGAAGGTGAAAAATCATATACCTGTAATCAATTTTCGCTTTCATCAGAACGTCCGATGATTGGTT                        <  SRR4302543.6860724/94‑1 (MQ=60)
                                                                       CCATTGTTATGGCCGCAGTTGCGGGTGAGCGAAGGTGAAAAATCATATACCTGTAATCAATTTTCGCTTTCATCAGAACGTCCGATGATTGGCT                        >  SRR4302543.7719300/1‑94 (MQ=60)
                                                                        CATTGTTATGGCCGCAGTTGCGGGTGAGCGAAGGTGAAAAATCATATACCTGTAATCAATTTTCGCTTTCATCAGAACGTCCGGTGATTGGTTT                       >  SRR4302543.3465890/1‑94 (MQ=60)
                                                                        CATTGTTATGGCCGCAGTTGCGGGTGAGCGAAGGTGAAAAATCATATACCTGTAATCAATTTTCGCTTTCATCAGAACGTCCGATGATTGGTTT                       <  SRR4302543.2258304/94‑1 (MQ=60)
                                                                        CATTGTTATGGCCGCAGTTGCGGGTGAGCGAAGGTGAAAAATCATATACCTGTAATCAATTTTCGCTTTCATCAGAACGTCCGATGATTGGTTT                       >  SRR4302543.6164652/1‑94 (MQ=60)
                                                                         ATTGTTATGGCCGCAGTTGCGGGTGAGCGAAGGTGAAAAATCATATACCTGTAATCAATTTTCGCTTTCATCAGAACGTCCGATGATTGGTTTT                      >  SRR4302543.513382/1‑94 (MQ=60)
                                                                         ATTGTTATGGCCGCAGTTGCGGGTGAGCGAAGGTGAAAAATCATATACCTGTAATCAATTTTCGCTTTCATCAGAACGTCCGATGATTGGTTTT                      >  SRR4302543.7454463/1‑94 (MQ=60)
                                                                         ATTGTTATGGCCGCAGTTGCGGGTGAGCGAAGGTGAAAAATCATATACCTGTAATCAATTTTCGCTTTCATCAGAACGTCCGATGATTGGTTTT                      >  SRR4302543.2136795/1‑94 (MQ=60)
                                                                         ATTGTTATGGCCGCAGTTGCGGGTGAGCGAAGGTGAAAAATCATATACCTGTAATCAATTTTCGCTTTCATCAGAACGTCCGATGATTGGTTTT                      >  SRR4302543.7230501/1‑94 (MQ=60)
                                                                         ATTGTTATGGCCGCAGTTGCGGGTGAGCGAAGGTGAAAAATCATATACCTGTAATCAATTTTCGCTGTCATCAGAACGTCCGATGATTGGTTTT                      >  SRR4302543.7641859/1‑94 (MQ=60)
                                                                          TTGTTATGGCCGCAGTTGCGGGTGAGCGAAGGTGAAAAATCATATACCTGTAATCAATTTTCGCTTTCATCAGAACGTCCGATGATTGGTTTTT                     <  SRR4302543.647739/94‑1 (MQ=60)
                                                                          TTGTTATGGCCGCAGTTGCGGGTGAGCGAAGGTGAAAAATCATATACCTGTAATCAATTTTCGCTTTCATCAGAACGTCCGATGATTGGTTTTT                     <  SRR4302543.5058884/94‑1 (MQ=60)
                                                                           TGTTATGGCCGCAGTTGCGGGTGAGCGAAGGTGAAAAATCATATACCTGTAATCAATTTTCGCTTTCATCAGAACGTCCGATGATTGGTTTTTG                    >  SRR4302543.4233270/1‑94 (MQ=60)
                                                                           TGTTATGGCCGCAGTTGCGGGTGAGCGAAGGTGAAAAATCATATACCTGTAATCAATTTTCGCTTTCATCAGAACGTCCGATGATTGGTTTTTG                    <  SRR4302543.1724275/94‑1 (MQ=60)
                                                                           TGTTATGGCCGCAGTTGCGGGTGAGCGAAGGTGAAAAATCATATACCTGTAATCAATTTTCGCTTTCATCAGAACGTCCGATGATTGGTTTTTG                    >  SRR4302543.1800256/1‑94 (MQ=60)
                                                                           TGTTATGGCCGCAGTTGCGGGTGAGCGAAGGTGAAAAATCATATACCTGTAATCAATTTTCGCTTTCATCAGAACGTCCGATGATTGGTTTTTG                    <  SRR4302543.6653432/94‑1 (MQ=60)
                                                                            GTTATGGCCGCAGTTGCGGGTGAGCGAAGGTGAAAAATCATATACCTGTAATCAATTTTCGCTTTCATCAGAACGTCCGATGATTGGTTTTTGC                   >  SRR4302543.5816259/1‑94 (MQ=60)
                                                                            GTTATGGCCGCAGTTGCGGGTGAGCGAAGGTGAAAAATCATATACCTGTAATCAATTTTCGCTTTCATCAGAACGTCCGATGATTGGTTTTTGC                   >  SRR4302543.614674/1‑94 (MQ=60)
                                                                             TTATGGCCGCAGTTGCGGGTGAGCGAAGGTGAAAAATCATATACCTGTAATCAATTTTCGCTTTCATCAGAACGTCCGATGATTGGTTTTTGCC                  <  SRR4302543.4336485/94‑1 (MQ=60)
                                                                              TATGGCCGCAGTTGCGGGTGAGCGAAGGTGAAAAATCATATACCTGTAATCAATTTTCGCTTTCATCAGAACGTCCGATGATTGGTTTTTGCCC                 >  SRR4302543.2277940/1‑94 (MQ=60)
                                                                              TATGGCCGCAGTTGCGGGTGAGCGAAGGTGAAAAATCATATACCTGTAATCAATTTTCGCTTTCATCAGAACGTCCGATGATTGGTTTTTGCCC                 <  SRR4302543.3378319/94‑1 (MQ=60)
                                                                               ATGGCCGCAGTTGCGGGTGAGCGAAGGTGAAAAATCATATACCTGTAATCAATTTTCGCTTTCATCAGAACGTCCGATGATTGGTTTTTGCCCG                >  SRR4302543.6819640/1‑94 (MQ=60)
                                                                               ATGGCCGCAGTTGCGGGTGAGCGAAGGTGAAAAATCATATACCTGTAATCAATTTTCGCTTTCATCAGAACGTCCGATGATTGGTTTTTGCCCG                >  SRR4302543.1833910/1‑94 (MQ=60)
                                                                               ATGGCCGCAGTTGCGGGTGAGCGAAGGTGAAAAATCATATACCTGTAATCAATTTTCGCTTTCATCAGAACGTCCGATGATTGGTTTTTGCCCG                >  SRR4302543.6697419/1‑94 (MQ=60)
                                                                               ATGGCCGCAGTTGCGGGTGAGCGAAGGTGAAAAATCATATACCTGTAATCAATTTTCGCTTTCATCAGAACGTCCGATGATTGGTTTTTGCCCG                <  SRR4302543.805883/94‑1 (MQ=60)
                                                                               ATGGCCGCAGTTGCGGGTGAGCGAAGGTGAAAAATCATATACCTGTAATCAATTTTCGCTTTCATCAGAACGTCCGATGATTGGTTTTTGCCCG                >  SRR4302543.6336291/1‑94 (MQ=60)
                                                                                 GGCCGCAGTTGCGGGTGAGCGAAGGTGAAAAATCATATACCTGTAATCAATTTTCGCTTTCATCAGAACGTCCGATGATTGGTTTTTGCCCGGG              <  SRR4302543.315715/94‑1 (MQ=60)
                                                                                 GGCCGCAGTTGCGGGTGAGCGAAGGTGAAAAATCATATACCTGTAATCAATTTTCGCTTTCATCAGAACGTCCGATGATTGGTTTTTGCCCGGG              >  SRR4302543.6694047/1‑94 (MQ=60)
                                                                                 GGCCGCAGTTGCGGGTGAGCGAAGGTGAAAAATCATATACCTGTAATCAATTTTCGCTTTCATCAGAACGTCCGATGATTGGTTTTTGCCCGGG              <  SRR4302543.3792282/94‑1 (MQ=60)
                                                                                 GGCCGCAGTTGCGGGTGAGCGAAGGTGAAAAATCATATACCTGTAATCAATTTTCGCTTTCATCAGAACGTCCGATGATTGGTTTTTGCCCGGG              >  SRR4302543.7543627/1‑94 (MQ=60)
                                                                                     GCAGTTGCGGGTGAGCGAAGGTGAAAAATCATATACCTGTAATCAATTTTCGCTTTCATCAGAACGTCCGATGATTGGTTTTTGCCCGGGTGCG          >  SRR4302543.3254492/1‑94 (MQ=60)
                                                                                       AGTTGCGGGTGAGCGAAGGTGAAAAATCATATACCTGTAATCAATTTTCGCTTTCATCAGAACGTCCGATGATTGGTTTTTGCCCGGGTGCGGA        >  SRR4302543.7712657/1‑94 (MQ=60)
                                                                                       AGTTGCGGGTGAGCGAAGGTGAAAAATCATATACCTGTAATCAATTTTCGCTTTCATCAGAACGTCCGATGATTGGTTTTTGCCCGGGTGCGGA        >  SRR4302543.3951825/1‑94 (MQ=60)
                                                                                        GTTGCGGGTGAGCGAAGGTGAAAAATCATATACCTGTAATCAATTTTCGCTTTCATCAGAACGTCCGATGATTGGTTTTTGCCCGGGTGCGGAG       >  SRR4302543.1769538/1‑94 (MQ=60)
                                                                                        GTTGCGGGTGAGCGAAGGTGAAAAATCATATACCTGTAATCAATTTTCGCTTTCATCAGAACGTCCGATGATTGGTTTTTGCCCGGGTGCGGAG       >  SRR4302543.4307223/1‑94 (MQ=60)
                                                                                        GTTGCGGGTGAGCGAAGGTGAAAAATCATATACCTGTAATCAATTTTCGCTTTCATCAGAACGTCCGATGATTGGTTTTTGCCCGGGTGCGGAG       <  SRR4302543.3096837/94‑1 (MQ=60)
                                                                                        GTGGCGGGTGAGCGAAAGTGAAAAATGATAGACCTGTAATCAATTTTCGCTTTCATCAGAACCTCCGATGATAGGTTTTTGCCCGGGTGCGGAG       <  SRR4302543.404295/94‑1 (MQ=60)
                                                                                         TTGCGGGTGAGCGAAGGTGAAAAATCATATACCTGTAATCAATTTTCGCTTTCATCAGAACGTCCGATGATTGGTTTTTGCCCGGGTGCGGAGT      >  SRR4302543.5122084/1‑94 (MQ=60)
                                                                                         TTGCGGGTGAGCGAAGGTGAAAAATCATATACCTGTAATCAATTTTCGCTTTCATCAGAACGTCCGATGATTGGTTTTTGCCCGGGTGCGGAGT      <  SRR4302543.792834/94‑1 (MQ=60)
                                                                                         TTGCGGGTGAGCGAAGGTGAAAAATCATATACCTGTAATCAATTTTCGCTTTCATCAGAACGTCCGATGATTGGTTTTTGCCCGGGTGCGGAGT      >  SRR4302543.3131724/1‑94 (MQ=60)
                                                                                          TGCGGGTGAGCGAAGGTGAAAAATCATATACCTGTAATCAATTTTCGCTTTCATCAGAACGTCCGATGATTGGTTTTTGCCCGGGTGCGGAGTT     >  SRR4302543.6778573/1‑94 (MQ=60)
                                                                                          TGCGGGTGAGCGAAGGTGAAAAATCATATACCTGTAATCAATTTTCGCTTTCATCAGAACGTCCGATGATTGGTTTTTGCCCGAGTGCGGAGTT     <  SRR4302543.4033384/94‑1 (MQ=60)
                                                                                            CGGGTGAGGGAAGGTGAAAAATCATATACCTGTAATCAATTTTCGCTTTCATCAGAACGTCCGATGATTGGTTTTTGCCCGGGTGCGGAGTTTG   >  SRR4302543.6564443/1‑94 (MQ=60)
                                                                                            CGGGTGAGCGAAGGTGAAAAATCATATACCTGTAATCAATTTTCGCTTTCATCAGAACGTCCGATGATTGGTTTTTGCCCGGGTGCGGAGTTTG   >  SRR4302543.1283886/1‑94 (MQ=60)
                                                                                             GGGTGAGCGAAGGTGAAAAATCATATACCTGTAATCAATTTTCGCTTTCATCAGAACGTCCGATGATTGGTTTTTGCCCGGGTGCGGAGTTTGG  <  SRR4302543.3233582/94‑1 (MQ=60)
                                                                                             GGGTGAGCGAAGGTGAAAAATCATATACCTGTAATCAATTTTCGCTTTCATCAGAACGTCCGATGATTGGTTTTTGCCCGGGTGCGGAGTTTGG  >  SRR4302543.3745794/1‑94 (MQ=60)
                                                                                             |                                                                                             
TAATGGTGGAACGCTATATAGCGCTGGCCTATGACAAAGGCATTATGCGCACAGCACAAGATCTGCCGCAGCCATTGTTATGGCCGCAGTTGCAGGTGAGCGAAGGTGAAAAATCATATACCTGTAATCAATTTTCGCTTTCATCAGAACGTCCGATGATTGGTTTTTGCCCGGGTGCGGAGTTTGG  >  NC_000913/3792944‑3793130

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 7 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑