Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.

ALE, Flask, Isolate	Predicted Mutations	Mean Coverage	Total Reads	Percent Mapped	Mapped Reads	Average Read Length
A1 F1 I1 R1	1696	279.3	15874187	97.8%	15524954	93.0

Breseq alignment

BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	3,800,657	T→C	E10G (GAG→GGG)	rfaI ←	UDP‑D‑galactose:(glucosyl)lipopolysaccharide‑ alpha‑1,3‑D‑galactosyltransferase

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	3,800,657	0	T	C	99.0%	1241.0 / ‑1.8	396	E10G (GAG→GGG)	rfaI	UDP‑D‑galactose:(glucosyl)lipopolysaccharide‑ alpha‑1,3‑D‑galactosyltransferase
Reads supporting (aligned to +/- strand): ref base T (3/1); new base C (209/183); total (212/184)
Fisher's exact test for biased strand distribution p-value = 6.27e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 5.12e-01

Only 100 of 400 total aligned reads displayed.

AGAAAGTTTTTGTCAGTTCCATAAGCGATGTCCAGACAAAGATTTTCTGTTTCTACTTTATGATCATAATCAATAACTGAATTAAGAAACTCAGTTTCCTGGAAAAACACCTGCTGCATTATTTCCTCCGGGAAATAGCAGAAATAATTACCTTATGTAATCTATCGTAATACTTCGATT  >  NC_000913/3800567‑3800746

 gAAAGTTTTTGTCAGTTCCATAAGCGATGTCCAGACAAAGATTTTCTGTTTCTACTTTATGATCATAATCAATAACTGAATTAAGAAACCCAg                                                                                        >  1:4991788/1‑93 (MQ=255)

 gAAAGTTTTTGTCAGTTCCATAAGCGATGTCCAGACAAAGATTTTCTGTTTCTACTTTATGATCATAATCAATAACTGAATTAAGAAACCCAg                                                                                        >  2:2907188/1‑93 (MQ=255)

   aaGTTTTTGTCAGTTCCATAAGCGATGTCCAGACAAAGATTTTCTGTTTCTACTTTATGATCATAATCAATAACTGAATTAAGAAACCCAGtt                                                                                      <  1:255043/93‑1 (MQ=255)

    aGTTTTTGTCAGTTCCATAAGCGATGTCCAGACAAAGATTTTCTGTTTCTACTTTATGATCATAATCAATAACTGAATTAAGAAACCCAGttt                                                                                     <  1:598885/93‑1 (MQ=255)

     gTTTTTGTCAGTTCCATAAGCGATGTCCAGACAAAGATTTTCTGTTTCTACTTTATGATCATAATCAATAACTGAATTAAGAAACCCAGTTTc                                                                                    >  2:4125233/1‑93 (MQ=255)

      tttttGTCAGTTCCATAAGCGATGTCCAGACAAAGATTTTCTGTTTCTACTTTATGATCATAATCAATAACTGAATTAAGAAACCCAGTTTcc                                                                                   >  1:1171858/1‑93 (MQ=255)

       ttttGTCAGTTCCATAAGCGATGTCCAGACAAAGATTTTCTGTTTCTACTTTATGATCATAATCAATAACTGAATTAAGAAACCCAGTTTCCt                                                                                  <  1:3061884/93‑1 (MQ=255)

        tttGTCAGTTCCATAAGCGATGTCCAGACAAAGATTTTCTGTTTCTACTTTATGATCATAATCAATAACTGAATTAAGAAACCCAGTTTCCTg                                                                                 >  2:6292956/1‑93 (MQ=255)

        tttGTCAGTTCCATAAGCGATGTCCAGACAAAGATTTTCTGTTTCTACTTTATGATCATAATCAATAACTGAATTAAGAAACCCAGTTTCCTg                                                                                 <  2:7666922/93‑1 (MQ=255)

             cAGTTCCATAAGCGATGTCCAGACAAAGATTTTCTGTTTCTACTTTATGATCATAATCAATAACTGAATTAAGAAACCCAGTTTCCTGGaaaa                                                                            <  1:180173/93‑1 (MQ=255)

             cAGTTCCATAAGCGATGTCCAGACAAAGATTTTCTGTTTCTACTTTATGATCATAATCAATAACTGAATTAAGAAACCCAGTTTCCTGGaaaa                                                                            >  2:3192170/1‑93 (MQ=255)

              aGTTCCATAAGCGATGTCCAGACAAAGATTTTCTGTTTCTACTTTATGATCATAATCAATAACTGAATTAAGAAACCCAGTTTCCTGGaaaaa                                                                           <  2:22860/93‑1 (MQ=255)

              aGTTCCATAAGCGATGTCCAGACAAAGATTTTCTGTTTCTACTTTATGATCATAATCAATAACTGAATTAAGAAACCCAGTTTCCTGGaaaaa                                                                           >  1:766718/1‑93 (MQ=255)

               gTTCCATAAGCGATGTCCAGACAAAGATTTTCTGTTTCTACTTTATGATCATAATCAATAACTGAATTAAGAAACCCAGTTTCCTGGAAAAac                                                                          >  1:5271459/1‑93 (MQ=255)

               gTTCCATAAGCGATGTCCAGACAAAGATTTTCTGTTTCTACTTTATGATCATAATCAATAACTGAATTAAGAAACCCAGTTTCCTGGAAAAac                                                                          >  2:3719867/1‑93 (MQ=255)

                 tCCATAAGCGATGTCCAGACAAAGATTTTCTGTTTCTACTTTATGATCATAATCAATAACTGAATTAAGAAACCCAGTTTCCTGGAAAAacac                                                                        <  2:3404643/93‑1 (MQ=255)

                 tCCATAAGCGATGTCCAGACAAAGATTTTCTGTTTCTACTTTATGATCATAATCAATAACTGAATTAAGAAACCCAGTTTCCTGGAAAAacac                                                                        <  2:5439654/93‑1 (MQ=255)

                  ccATAAGCGATGTCCAGACAAAGATTTTCTGTTTCTACTTTATGATCATAATCAATAACTGAATTAAGAAACCCAGTTTCCTGGAAAAACAcc                                                                       <  1:2144238/93‑1 (MQ=255)

                  ccATAAGCGATGTCCAGACAAAGATTTTCTGTTTCTACTTTATGATCATAATCAATAACTGAATTAAGAAACCCAGTTTCCTGGAAAAAAAcc                                                                       <  2:4587380/93‑1 (MQ=255)

                   cATAAGCGATGTCCAGACAAAGATTTTCTGTTTCTACTTTATGATCATAATCAATAACTGAATTAAGAAACCCAGTTTCCTGGAAAAACACct                                                                      >  1:7225690/1‑93 (MQ=255)

                     tAAGCGATGTCCAGACAAAGATTTTCTGTTTCTACTTTATGATCATAATCAATAACTGAATTAAGAAACCCAGTTTCCTGGAAAAACACctgc                                                                    <  2:6232449/93‑1 (MQ=255)

                      aaGCGATGTCCAGACAAAGATTTTCTGTTTCTACTTTATGATCATAATCAATAACTGAATTAAGAAACCCAGTTTCCTGGAAAAACACctgct                                                                   >  1:5829468/1‑93 (MQ=255)

                       aGCGATGTCCAGACAAAGATTTTCTGTTTCTACTTTATGATCATAATCAATAACTGAATTAAGAAACCCAGTTTCCTGGAAAAACACctgctg                                                                  <  2:4513186/93‑1 (MQ=255)

                        gCGATGTCCAGACAAAGATTTTCTGTTTCTACTTTATGATCATAATCAATAACTGAATTAAGAAACCCAGTTTCCTGGAAAAACACCtgctgc                                                                 <  2:5949460/93‑1 (MQ=255)

                            tGTCCAGACAAAGATTTTCTGTTTCTACTTTATGATCATAATCAATAACTGAATTAAGAAACCCAGTTTCCTGGAAAAACACCTGCTGCatta                                                             <  2:4939517/93‑1 (MQ=255)

                              tCCAGACAAAGATTTTCTGTTTCTACTTTATGATCATAATCAATAACTGAATTAAGAAACCCAGTTTCCTGGAAAAACACCTGCTGCattatt                                                           >  1:2631885/1‑93 (MQ=255)

                                cAGACAAAGATTTTCTGTTTCTACTTTATGATCATAATCAATAACTGAATTAAGAAACCCAGTTTCCTGGAAAAACACCTGCTGCATTATTtc                                                         <  2:7268289/93‑1 (MQ=255)

                                 aGACAAAGATTTTCTGTTTCTACTTTATGATCATAATCAATAACTGAATTAAGAAACCCAGTTTCCTGGAAAAACACCTGCTGCATTATTtcc                                                        <  1:5503223/93‑1 (MQ=255)

                                  gACAAAGATTTTCTGTTTCTACTTTATGATCATAATCAATAACTGAATTAAGAAACCCAGTTTCCTGGAAAAACACCTGCTGCATTATTtcct                                                       >  2:124060/1‑93 (MQ=255)

                                  gACAAAGATTTTCTGTTTCTACTTTATGATCATAATCAATAACTGAATTAAGAAACCCAGTTTCCTGGAAAAACACCTGCTGCATTATTtcct                                                       <  1:4326202/93‑1 (MQ=255)

                                  aaCAAAGATGTTCTGTTTCTACTTTATGATCATAATCAATAACTGAATTAAGAAACCCAGTTTCCTGGAAAAACACCTGCTGCATTATTtcct                                                       <  2:6492303/92‑1 (MQ=255)

                                   aCAAAGATTTTCTGTTTCTACTTTATGATCATAATCAATAACTGAATTAAGAAACCCAGTTTCCTGGAAAAACACCTGCTGCATTATTtcctc                                                      <  2:2147837/93‑1 (MQ=255)

                                   aCAAAGATTTTCTGTTTCTACTTTATGATCATAATCAATAACTGAATTAAGAAACCCAGTTTCCTGGAAAAACACCTGCTGCATTATTtcctc                                                      >  2:3565963/1‑93 (MQ=255)

                                     aaaGATTTTCTGTTTCTACTTTATGATCATAATCAATAACTGAATTAAGAAACCCAGTTTCCTGGAAAAACACCTGCTGCATTATTTCCTCCg                                                    <  2:5233870/93‑1 (MQ=255)

                                        gATTTTCTGTTTCTACTTTATGATCATAATCAATAACTGAATTAAGAAACCCAGTTTCCTGGAAAAACACCTGCTGCATTATTTCCTCCGGGa                                                 >  1:7310499/1‑93 (MQ=255)

                                        gATTTTCTGTTTCTACTTTATGATCATAATCAATAACTGAATTAAGAAACCCAGTTTCCTGGAAAAACACCTGCTGCATTATTTCCTCCGGGa                                                 >  2:3589484/1‑93 (MQ=255)

                                         aTTTTCTGTTTCTACTTTATGATCATAATCAATAACTGAATTAAGAAACCCAGTTTCCTGGAAAAACACCTGCTGCATTATTTCCTCCGGGaa                                                >  1:3528738/1‑93 (MQ=255)

                                         aTTTTCTGTTTCTACTTTATGATCATAATCAATAACTGAATTAAGAAACCCAGTTTCCTGGAAAAACACCTGCTGCATTATTTCCTCCGGGaa                                                >  1:1683587/1‑93 (MQ=255)

                                          ttttCTGTTTCTACTTTATGATCATAATCAATAACTGAATTAAGAAACCCAGTTTCCTGGAAAAACACCTGCTGCATTATTTCCTCCGGGaaa                                               <  2:4322624/93‑1 (MQ=255)

                                             tCTGTTTCTACTTTATGATCATAATCAATAACTGAATTAAGAAACCCAGTTTCCTGGAAAAACACCTGCTGCATTATTTCCTCCGGGAAATAg                                            >  1:5134897/1‑93 (MQ=255)

                                             tCTGTTTCTACTTTATGATCATAATCAATAACTGAATTAAGAAACCCAGTTTCCTGGAAAAACACCTGCTGCATTATTTCCTCCGGGAAATAg                                            <  1:6775942/93‑1 (MQ=255)

                                             tCTGTTTCTACTTTATGATCATAATCAATAACTGAATTAAGAAACCCAGTTTCCTGGAAAAACACCTGCTGCATTATTTCCTCCGGGAAATAg                                            >  1:6946863/1‑93 (MQ=255)

                                              cTGTTTCTACTTTATGATCATAATCAATAACTGAATTAAGAAACCCAGTTTCCTGGAAAAACACCTGCTGCATTATTTCCTCCGGGAAATAGc                                           >  1:6345021/1‑93 (MQ=255)

                                               tGTTTCTACTTTATGATCATAATCAATAACTGAATTAAGAAACCCAGTTTCCTGGAAAAACACCTGCTGCATTATTTCCTCCGGGAAATAGCa                                          <  2:206382/93‑1 (MQ=255)

                                               tGTTTCTACTTTATGATCATAATCAATAACTGAATTAAGAAACCCAGTTTCCTGGAAAAACACCTGCTGCATTATTTCCTCCGGGAAATAGCa                                          >  2:7515855/1‑93 (MQ=255)

                                                  ttCTACTTTATGATCATAATCAATAACTGAATTAAGAAACCCAGTTTCCTGGAAAAACACCTGCTGCATTATTTCCTCCGGGAAATAGCAGaa                                       >  2:5535794/1‑93 (MQ=255)

                                                  ttCTACTTTATGATCATAATCAATAACTGAATTAAGAAACCCAGTTTCCTGGAAAAACACCTGCTGCATTATTTCCTCCGGGAAATAGCAGaa                                       <  1:3257261/93‑1 (MQ=255)

                                                   gcTACTTTAAGAGCATAATCAATAACTGAATTAAGAAACCCAGTTTCCTGGAAAAACACCTGCTGCATTATTTCCTCCGGGAAATAGCAGaaa                                      <  1:2330894/92‑1 (MQ=255)

                                                    cTACTTTATGATCATAATCAATAACTGAATTAAGAAACCCAGTTTCCTGGAAAAACACCTGCTGCATTATTTCCTCCGGGAAATAGCAGAaat                                     <  2:6682293/93‑1 (MQ=255)

                                                    cTACTTTATGATCATAATCAATAACTGAATTAAGAAACCCAGTTTCCTGGAAAAACACCTGCTGCATTATTTCCTCCGGGAAATAGCAGAaat                                     >  2:3049090/1‑93 (MQ=255)

                                                     tACTTTATGATCATAATCAATAACTGAATTAAGAAACCCAGTTTCCTGGAAAAACACCTGCTGCATTATTTCCTCCGGGAAATAGCAGAaata                                    <  2:4015722/93‑1 (MQ=255)

                                                      aCTTTATGATCATAATCAATAACTGAATTAAGAAACCCAGTTTCCTGGAAAAACACCTGCTGCATTATTTCCTCCGGGAAATAGCAGAaataa                                   <  2:6004547/93‑1 (MQ=255)

                                                      aCTTTATGATCATAATCAATAACTGAATTAAGAAACCCAGTTTCCTGGAAAAACACCTGCTGCATTATTTCCTCCGGGAAATAGCAGAaataa                                   <  2:6445784/93‑1 (MQ=255)

                                                       cTTTATGATCATAATCAATAACTGAATTAAGAAACCCAGTTTCCTGGAAAAACACCTGCTGCATTATTTCCTCCGGGAAATAGCAGAaataat                                  <  2:5313622/93‑1 (MQ=255)

                                                        tttATGATCATAATCAATAACTGAATTAAGAAACCCAGTTTCCTGGAAAAACACCTGCTGCATTATTTCCTCCGGGAAATAGCAGAAATAAtt                                 >  1:820929/1‑93 (MQ=255)

                                                        tttATGATCATAATCAATAACTGAATTAAGAAACCCAGTTTCCTGGAAAAACACCTGCTGCATTATTTCCTCCGGGAAATAGCAGAAATAAtt                                 >  2:7784303/1‑93 (MQ=255)

                                                        tttATGATCATAATCAATAACTGAATTAAGAAACCCAGTTTCCTGGAAAAACACCTGCTGCATTATTTCCTCCGGGAAATAGCAGAAATAAtt                                 <  1:7437993/93‑1 (MQ=255)

                                                        tttAGGATCATAATCAATAACTGAACTAAGAAACCCAGTTTCCTGGAAAAACACCTGCTGCATTATTTCCTCCGGGAAATAGCAGAAATAAtt                                 <  1:2892091/93‑1 (MQ=255)

                                                         ttATGATCATAATCAATAACTGAATTAAGAAACCCAGTTTCCTGGAAAAACACCTGCTGCATTATTTCCTCCGGGAAATAGCAGAAATAATTa                                >  2:1960499/1‑93 (MQ=255)

                                                          tATGATCATAATCAATAACTGAATTAAGAAACCCAGTTTCCTGGAAAAACACCTGCTGCATTATTTCCTCCGGGAAATAGCAGAAATAATTAc                               <  2:1010939/93‑1 (MQ=255)

                                                          tATGATCATAATCAATAACTGAATTAAGAAACCCAGTTTCCTGGAAAAACACCTGCTGCATTATTTCCTCCGGGAAATAGCAGAAATAATTAc                               >  2:2803788/1‑93 (MQ=255)

                                                          tATGATCATAATCAATAACTGAATTAAGAAACCCAGTTTCCTGGAAAAACACCTGCTGCATTATTTCCTCCGGGAAATAGCAGAAATAATTAc                               >  2:61471/1‑93 (MQ=255)

                                                          tATGATCATAAACAATAACTGAATTAAGAAACCCAGTTTCCTGGAAAAACACCTGCTGCATTATTTCCTCCGGGAAATAGCAGAAATAATTAc                               <  1:7821036/93‑1 (MQ=255)

                                                           aTGATCATAATCAATAACTGAATTAAGAAACCCAGTTTCCTGGAAAAACACCTGCTGCATTATTTCCTCCGGGAAATAGCAGAAATAATTAcc                              >  1:4410751/1‑93 (MQ=255)

                                                            tGATCATAATCAATAACTGAATTAAGAAACCCAGTTTCCTGGAAAAACACCTGCTGCATTATTTCCTCCGGGAAATAGCAGAAATAATTACCt                             <  1:1120519/93‑1 (MQ=255)

                                                            tGATCATAATCAATAACTGAATTAAGAAACCCAGTTTCCTGGAAAAACACCTGCTGCATTATTTCCTCCGGGAAATAGCAGAAATAATTACCt                             >  1:1451120/1‑93 (MQ=255)

                                                              aTCATAATCAATAACTGAATTAAGAAACTCAGTTTCCTGGAAAAACACCTGCTGCATTATTTCCTCCGGGAAATAGCAGAAATAATTACCTTa                           >  2:5882294/1‑93 (MQ=255)

                                                              aTCATAATCAATAACTGAATTAAGAAACCCAGTTTCCTGGAAAAACACCTGCTGCATTATTTCCTCCGGGAAATAGCAGAAATAATTACCTTa                           <  1:100665/93‑1 (MQ=255)

                                                              aTCATAATCAATAACTGAATTAAGAAACCCAGTTTCCTGGAAAAACACCTGCTGCATTATTTCCTCCGGGAAATAGCAGAAATAATTACCTTa                           <  1:2434605/93‑1 (MQ=255)

                                                              aTCATAATCAATAACTGAATTAAGAAACCCAGTTTCCTGGAAAAACACCTGCTGCATTATTTCCTCCGGGAAATAGCAGAAATAATTACCTTa                           <  1:5545639/93‑1 (MQ=255)

                                                                cATAATCAATAACTTAATTAAGAAACCCAGTTTCCTGGAAAAACACCTGCTGCATTATTTCCTCCGGGAAATAGCAGAAATAATTACCTTATg                         >  2:2673473/1‑93 (MQ=255)

                                                                cATAATCAATAACTGAATTAAGAAACCCAGTTTCCTGGAAAAACACCTGCTGCATTATTTCCTCCGGGAAATAGCAGAAATAATTACCTTATg                         >  2:2114826/1‑93 (MQ=255)

                                                                 aTAATCAATAACTGAATTAAGAAACCCAGTTTCCTGGAAAAACACCTGCTGCATTATTTCCTCCGGGAAATAGCAGAAATAATTACCTTATGt                        >  1:3944258/1‑93 (MQ=255)

                                                                  tAATCAATAACTGAATTAAGAAACCCAGTTTCCTGGAAAAACACCTGCTGCATTATTTCCTCCGGGAAATAGCAGAAATAATTACCTTATGTa                       >  2:1403656/1‑93 (MQ=255)

                                                                  tAATCAATAACTGAATTAAGAAACCCAGTTTCCTGGAAAAACACCTGCTGCATTATTTCCTCCGGGAAATAGCAGAAATAATTACCTTATGTa                       >  1:2749924/1‑93 (MQ=255)

                                                                    aTCAATAACTGAATTAAGAAACCCAGTTTCCTGGAAAAACACCTGCTGCATTATTTCCTCCGGGAAATAGCAGAAATAATTACCTTATGTAAt                     >  2:5674091/1‑93 (MQ=255)

                                                                     tCAATAACTGAATTAAGAAACCCAGTTTCCTGGAAAAACACCTGCTGCATTATTTCCTCCGGGAAATAGCAGAAATAATTACCTTATGTAATc                    <  2:7617995/93‑1 (MQ=255)

                                                                     tCAATAACTGAATTAAGAAACCCAGTTTCCTGGAAAAACACCTGCTGCATTATTTCCTCCGGGAAATAGCAGAAATAATTACCTTATGTAATc                    <  2:735108/93‑1 (MQ=255)

                                                                       aaTAACTGAATTAAGAAACCCAGTTTCCTGGAAAAACACCTGCTGCATTATTTCCTCCGGGAAATAGCAGAAATAATTACCTTATGTAATCTa                  >  1:661560/1‑93 (MQ=255)

                                                                       aaTAACTGAATTAAGAAACCCAGTTTCCTGGAAAAACACCTGCTGCATTATTTCCTCCGGGAAATAGCAGAAATAATTACCTTATGTAATCTa                  <  2:7085494/93‑1 (MQ=255)

                                                                        aTAACTGAATTAAGAATCCCAGTTTCCTGGAAAAACACCTGCTGCATTATTTCCTCCGGGAAATAGCAGAAATAATTACCTTATGTAATCTAt                 <  2:5814816/93‑1 (MQ=255)

                                                                        aTAACTGAATTAAGAAACCCAGTTTCCTGGAAAAACACCTGCTGCATTATTTCCTCCGGGAAATAGCAGAAATAATTACCTTATGTAATCTAt                 <  2:7409633/93‑1 (MQ=255)

                                                                        aTAACTGAATTAAGAAACCCAGTTTCCTGGAAAAACACCTGCTGCATTATTTCCTCCGGGAAATAGCAGAAATAATTACCTTATGTAATCTAt                 <  2:3861497/93‑1 (MQ=255)

                                                                         tAACTGAATTAAGAAACCCAGTTTCCTGGAAAAACACCTGCTGCATTATTTCCTCCGGGAAATAGCAGAAATAATTACCTTATGTAATCTATc                >  1:2981158/1‑93 (MQ=255)

                                                                         tAACTGAATTAAGAAACCCAGTTTCCTGGAAAAACACCTGCTGCATTATTTCCTCCGGGAAATAGCAGAAATAATTACCTTATGTAATCTATc                <  1:6058182/93‑1 (MQ=255)

                                                                          aaCTGAATTAAGAAACCCAGTTTCCTGGAAAAACACCTGCTGCATTATTTCCTCCGGGAAATAGCAGAAATAATTACCTTATGTAATCTATCg               >  2:6808983/1‑93 (MQ=255)

                                                                          aaCTGAATTAAGAAACCCAGTTTCCTGGAAAAACACCTGCTGCATTATTTCCTCCGGGAAATAGCAGAAATAATTACCTTATGTAATCTATCg               <  1:7560281/93‑1 (MQ=255)

                                                                          aaCTGAATTAAGAAACCCAGTTTCCTGGAAAAACACCTGCTGCATTATTTCCTCCGGGAAATAGCAGAAAAAATTACCTTATGTAATCTATCg               >  1:2012496/1‑93 (MQ=255)

                                                                           aCTGAATTAAGAAACCCAGTTTCCTGGAAAAACACCTGCTGCATTATTTCCTCCGGGAAATAGCAGAAATAATTACCTTATGTAATCTATCGt              <  1:4193063/93‑1 (MQ=255)

                                                                           aCTGAATTAAGAAACCCAGTTTCCTGGAAAAACACCTGCTGCATTATTTCCTCCGGGAAATAGCAGAAATAATTACCTTATGTAATCTATCGt              >  1:616270/1‑93 (MQ=255)

                                                                           aCTGAATTAAGAAACCCAGTTTCCTGGAAAAACACCTGCTGCATTATTTCCTCCGGGAAATAGCAGAAATAATTACCTTATGTAATCTATCGt              >  2:5148347/1‑93 (MQ=255)

                                                                           aCTGAATTAAGAAACCCAGTTTCCTGGAAAAACACCTGCTGCATTATTTCCTCCGGGAAATAGCAGAAATAATTACCTTATGTAATCTATCGt              >  1:7358464/1‑93 (MQ=255)

                                                                                aTTAAGAAACCCAGTTTCCTGGAAAAACACCTGCTGCATTATTTCCTCCGGGAAATAGCAGAAATAATTACCTTATGTAATCTATCGTAATAc         >  2:1435026/1‑93 (MQ=255)

                                                                                aTTAAGAAACCCAGTTTCCTGGAAAAACACCTGCTGCATTATTTCCTCCGGGAAATAGCAGAAATAATTACCTTATGTAATCTATCGTAATAc         <  1:6465789/93‑1 (MQ=255)

                                                                                 ttAAGAAACCCAGTTTCCTGGAAAAACACCTGCTGCATTATTTCCTCCGGGAAATAGCAGAAATAATTACCTTATGTAATCTATCGTAATACt        >  2:1711605/1‑93 (MQ=255)

                                                                                 ttAAGAAACCCAGTTTCCTGGAAAAACACCTGCTGCATTATTTCCTCCGGGAAATAGCAGAAATAATTACCTTATGTAATCTATCGTAATACt        >  2:3146350/1‑93 (MQ=255)

                                                                                  tAAGAAACCCAGTTTCCTGGAAAAACACCTGCTGCATTATTTCCTCCGGGAAATAGCAGAAATAATTACCTTATGTAATCTATCGTAATACtt       <  2:4814826/93‑1 (MQ=255)

                                                                                   aaGAAACCGAGTTTCCTGGAAAAACACCTGCTGCATTATTTCCTCCGGTAAATAGCAGAAATAATTACCTTATGTAATCTATCGTAATACTTc      <  1:3705579/93‑1 (MQ=255)

                                                                                      aaaCCCAGTTTCCTGGAAAAACACCTGCTGCATTATTTCCTCCGGGAAATAGCAGAAATAATTACCTTATGTAATCTATCGTAATACTTCGAt   <  1:4648107/93‑1 (MQ=255)

                                                                                       aaCCCAGTTTCCTGGAAAAACACCTGCTGCATTATTTCCTCCGGGAAATAGCAGAAATAATTACCTTATGTAATCTATCGTAATACTTCGAtt  <  1:3143988/93‑1 (MQ=255)

AGAAAGTTTTTGTCAGTTCCATAAGCGATGTCCAGACAAAGATTTTCTGTTTCTACTTTATGATCATAATCAATAACTGAATTAAGAAACTCAGTTTCCTGGAAAAACACCTGCTGCATTATTTCCTCCGGGAAATAGCAGAAATAATTACCTTATGTAATCTATCGTAATACTTCGATT  >  NC_000913/3800567‑3800746

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 26 ≤` `ATCG/ATCG` `< 32 ≤` `ATCG/ATCG` `< 35 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`

GATK/CNVnator alignment

BRESEQ :: bam2aln output Only 200 of 202 total aligned reads displayed.

ATAGAAAGTTTTTGTCAGTTCCATAAGCGATGTCCAGACAAAGATTTTCTGTTTCTACTTTATGATCATAATCAATAACTGAATTAAGAAACTCAGTTTCCTGGAAAAACACCTGCTGCATTATTTCCTCCGGGAAATAGCAGAAATAATTACCTTATGTAATCTATCGTAATACTTCGATTGGTA  >  NC_000913/3800565‑3800750

ATAGAAAGTTTTTGTCAGTTCCATAAGCGATGTCCAGACAAAGATTTTCTGTTTCTACTTTATGATCATAATCAATAACTGAATTAAGAAACCC                                                                                              <  SRR4302543.3991614/94‑1 (MQ=60)

ATAGAAAGTTTTTGTCAGTTCCATAAGCGATGTCCAGACAAAGATTTTCTGTTTCTACTTTATGATCATAATCAATAACTGAATTAAGAAACCC                                                                                              >  SRR4302543.5611624/1‑94 (MQ=60)

ATAGAAAGTTTTTGTCAGTTCCATAAGCGATGTCCAGACAAAGATTTTCTGTTTCTACTTTATGATCATAATCAATAACTGAATTAAGAAACCC                                                                                              <  SRR4302543.1385554/94‑1 (MQ=60)

  AGAAAGTTTTTGTCAGTTCCATAAGCGATGTCCAGACAAAGATTTTCTGTTTCTACTTTATGATCATAATCAATAACTGAATTAAGAAACCCAG                                                                                            <  SRR4302543.2996102/94‑1 (MQ=60)

  AGAAAGTTTTTGTCAGTTCCATAAGCGATGTCCAGACAAAGATTTTCTGTTTCTACTTTATGATCATAATCAATAACTGAATTAAGAAACCCAG                                                                                            >  SRR4302543.7601918/1‑94 (MQ=60)

  AGAAAGTTTTTGTCAGTTCCATAAGCGATGTCCAGACAAAGATTTTCTGTTTCTACTTTATGATCATAATCAATAACTGAATTAAGAAACCCAG                                                                                            >  SRR4302543.5037227/1‑94 (MQ=60)

  AGAAAGTTTTTGTCAGTTCCATAAGCGATGTCCAGACAAAGATTTTCTGTTTCTACTTTATGATCATAATCAATAACTGAATTAAGAAACCCAG                                                                                            >  SRR4302543.2452177/1‑94 (MQ=60)

  AGAAAGTTTTTGTCAGTTCCATAAGCGATGTCCAGACAAAGATTTTCTGTTTCTACTTTATGATCATAATCAATAACTGAATTAAGAAACCCAG                                                                                            >  SRR4302543.5584853/1‑94 (MQ=60)

   GAAAGTTTTTGTCAGTTCCATAAGCGATGTCCAGACAAAGATTTTCTGTTTCTACTTTATGATCATAATCAATAACTGAATTAAGAAACCCAGT                                                                                           <  SRR4302543.3488038/94‑1 (MQ=60)

   GAAAGTTTTTGTCAGTTCCATAAGCGATGTCCAGACAAAGATTTTCTGTTTCTACTTTATGATCATAATCAATAACTGAATTAAGAAACCCAGT                                                                                           <  SRR4302543.4116388/94‑1 (MQ=60)

   GAAAGTTTTTGTCAGTTCCATAAGCGATGTCCAGACAAAGATTTTCTGTTTCTACTTTATGATCATAATCAATAACTGAATTAAGAAACCCAGT                                                                                           >  SRR4302543.5574743/1‑94 (MQ=60)

    AAAGTTTTTGTCAGTTCCATAAGCGATGTCCAGACAAAGATTTTCTGTTTCTACTTTATGATCATAATCAATAACTGAATTAAGAAACTCAGTT                                                                                          >  SRR4302543.5390663/1‑94 (MQ=60)

    AAAGTTTTTGTCAGTTCCATAAGCGATGTCCAGACAAAGATTTTCTGTTTCTACTTTATGATCATAATCAATAACTGAATTAAGAAACCCAGTT                                                                                          >  SRR4302543.1777085/1‑94 (MQ=60)

     AAGTTTTTGTCAGTTCCATAAGCGATGTCCAGACAAAGATTTTCTGTTTCTACTTTATGATCATAATCAATAACTGAATTAAGAAACCCAGTTT                                                                                         <  SRR4302543.257268/94‑1 (MQ=60)

     AAGTTTTTGTCAGTTCCATAAGCGATGTCCAGACAAAGATTTTCTGTTTCTACTTTATGATCATAATCAATAACTGAATTAAGAAACCCAGTTT                                                                                         >  SRR4302543.3050314/1‑94 (MQ=60)

     AAGTTTTTGTCAGTTCCATAAGCGATGTCCAGACAAAGATTTTCTGTTTCTACTTTATGATCATAATCAATAACTGAATTAAGAAACCCAGTTT                                                                                         <  SRR4302543.239491/94‑1 (MQ=60)

     AAGTTTTTGTCAGTTCCATAAGCGATGTCCAGACAAAGATTTTCTGTTTCTACTTTATGATCATAATCAATAACTGAATTAAGAAACCCAGTTT                                                                                         <  SRR4302543.239492/94‑1 (MQ=60)

      AGTTTTTGTCAGTTCCATAAGCGATGTCCAGACAAAGATTTTCTGTTTCTACTTTATGATCATAATCAATAACTGAATTAAGAAACCCAGTTTC                                                                                        <  SRR4302543.604372/94‑1 (MQ=60)

      AGTTTTTGTCAGTTCCATAAGCGATGTCCAGACAAAGATTTTCTGTTTCTACTTTATGATCATAATCAATAACTGAATTAAGAAACCCAGTTTC                                                                                        >  SRR4302543.3743314/1‑94 (MQ=60)

       GTTTTTGTCAGTTCCATAAGCGATGTCCAGACAAAGATTTTCTGTTTCTACTTTATGATCATAATCAATAACTGAATTAAGAAACCCAGTTTCC                                                                                       >  SRR4302543.6184093/1‑94 (MQ=60)

       GTTTTTGTCAGTTCCATAAGCGATGTCCAGACAAAGATTTTCTGTTTCTACTTTATGATCATAATCAATAACTGAATTAAGAAACCCAGTTTCC                                                                                       >  SRR4302543.1182490/1‑94 (MQ=60)

       GTTTTTGTCAGTTCCATAAGCGATGTCCAGACAAAGATTTTCTGTTTCTACTTTATGATCATAATCAATAACTGAATTAAGAAACCCAGTTTCC                                                                                       >  SRR4302543.7554211/1‑94 (MQ=60)

       GTTTTTGTCAGTTCCATAAGCGATGTCCAGACAAAGATTTTCTGTTTCTACTTTATGATCATAATCAATAACTGAATTAAGAAACCCAGTTTCC                                                                                       >  SRR4302543.2075113/1‑94 (MQ=60)

        TTTTTGTCAGTTCCATAAGCGATGTCCAGACAAAGATTTTCTGTTTCTACTTTATGATCATAATCAATAACTGAATTAAGAAACCCAGTTTCCT                                                                                      <  SRR4302543.836762/94‑1 (MQ=60)

        TTTTTGTCAGTTCCATAAGCGATGTCCAGACAAAGATTTTCTGTTTCTACTTTATGATCATAATCAATAACTGAATTAAGAAACCCAGTTTCCT                                                                                      <  SRR4302543.7888973/94‑1 (MQ=60)

         TTTTGTCAGTTCCATAAGCGATGTCCAGACAAAGATTTTCTGTTTCTACTTTATGATCATAATCAATAACTGAATTAAGAAACCCAGTTTCCTG                                                                                     <  SRR4302543.6059070/94‑1 (MQ=60)

         TTTTGTCAGTTCCATAAGCGATGTCCAGACAAAGATTTTCTGTTTCTACTTTATGATCATAATCAATAACTGAATTAAGAAACCCAGTTTCCTG                                                                                     <  SRR4302543.6922876/94‑1 (MQ=60)

         TTTTGTCAGTTCCATAAGCGATGTCCAGACAAAGATTTTCTGTTTCTACTTTATGATCATAATCAATAACTGAATTAAGAAACCCAGTTTCCTG                                                                                     <  SRR4302543.6922877/94‑1 (MQ=60)

         TTTTGTCAGTTCCATAAGCGATGTCCAGACAAAGATTTTCTGTTTCTACTTTATGATCATAATCAATAACTGAATTAAGAAACCCAGTTTCCTG                                                                                     <  SRR4302543.3089424/94‑1 (MQ=60)

           TTGTCAGTTCCATAAGCGATGTCCAGACAAAGATTTTCTGTTTCTACTTTATGATCATAATCAATAACTGAATTAAGAAACCCAGTTTCCTGGA                                                                                   <  SRR4302543.5853510/94‑1 (MQ=60)

           TTGTCAGTTCCATAAGCGATGTCCAGACAAAGATTTTCTGTTTCTACTTTATGATCATAATCAATAACTGAATTAAGAAACCCAGTTTCCTGGA                                                                                   <  SRR4302543.5836775/94‑1 (MQ=60)

            TGTCAGTTCCATAAGCGATGTCCAGACAAAGATTTTCTGTTTCTACTTTATGATCATAATCAATAACTGAATTAAGAAACCCAGTTTCCTGGAA                                                                                  >  SRR4302543.2527406/1‑94 (MQ=60)

             GTCAGTTCCATAAGCGATGTCCAGACAAAGATTTTCTGTTTCTACTTTATGATCATAATCAATAACTGAATTAAGAAACCCAGTTTCCTGGAAA                                                                                 >  SRR4302543.3672831/1‑94 (MQ=60)

             GTCAGTTCCATAAGCGATGTCCAGACAAAGATTTTCTGTTTCTACTTTATGATCATAATCAATAACTGAATTAAGAAACCCAGTTTCCTGGAAA                                                                                 <  SRR4302543.4373093/94‑1 (MQ=60)

              TCAGTTCCATAAGCGATGTCCAGACAAAGATTTTCTGTTTCTACTTTATGATCATAATCAATAACTGAATTAAGAAACCCAGTTTCCTGGAAAA                                                                                >  SRR4302543.1025475/1‑94 (MQ=60)

               CAGTTCCATAAGCGATGTCCAGACAAAGATTTTCTGTTTCTACTTTATGATCATAATCAATAACTGAATTAAGAAACCCAGTTTCCTGGAAAAA                                                                               >  SRR4302543.773459/1‑94 (MQ=60)

               CAGTTCCATAAGCGATGTCCAGACAAAGATTTTCTGTTTCTACTTTATGATCATAATCAATAACTGAATTAAGAAACCCAGTTTCCTGGAAAAA                                                                               >  SRR4302543.4480760/1‑94 (MQ=60)

               CAGTTCCATAAGCGATGTCCAGACAAAGATTTTCTGTTTCTACTTTATGATCATAATCAATAACTGAATTAAGAAACCCAGTTTCCTGGAAAAA                                                                               <  SRR4302543.181709/94‑1 (MQ=60)

               CAGTTCCATAAGCGATGTCCAGACAAAGATTTTCTGTTTCTACGTTATGATCATAATCAATAACTGAATTAAGAAACCCAGTTTCCTGGAAAAA                                                                               <  SRR4302543.1038735/94‑1 (MQ=60)

                AGTTCCATAAGCGATGTCCAGACAAAGATTTTCTGTTTCTACTTTATGATCATAATCAATAACTGAATTAAGAAACCCAGTTTCCTGGAAAAAC                                                                              <  SRR4302543.1377533/94‑1 (MQ=60)

                AGTTCCATAAGCGATGTCCAGACAAAGATTTTCTGTTTCTACTTTATGATCATAATCAATAACTGAATTAAGAAACCCAGTTTCCTGGAAAAAC                                                                              >  SRR4302543.5319014/1‑94 (MQ=60)

                AGTTCCATAAGCGATGTCCAGACAAAGATTTTCTGTTTCTACTTTATGATCATAATCAATAACTAAATTAAGAAACCCAGTTTCCTGGAAAAAC                                                                              <  SRR4302543.1377534/94‑1 (MQ=60)

                 GTTCCATAAGCGATGTCCAGACAAAGATTTTCTGTTTCTACTTTATGATCATAATCAATACCTGAATTAAGAAACCCAGTTTCCTGGAAAAACA                                                                             >  SRR4302543.7684708/1‑94 (MQ=60)

                 GTTCCATAAGCGATGTCCAGACAAAGATTTTCTGTTTCTACTTTATGATCATAATCAATAACTGAATTAAGAAACCCAGTTTCCTGGAAAAACA                                                                             >  SRR4302543.7401603/1‑94 (MQ=60)

                  TTCCATAAGCGATGTCCAGACAAAGATTTTCTGTTTCTACTTTATGATCATAATCAATAACTGAATTAAGAAACCCAGTTTCCTGGAAAAACAC                                                                            <  SRR4302543.1513947/94‑1 (MQ=60)

                    CCATAAGCGATGTCCAGACAAAGATTTTCTTTTTCTACTTTATGATCATAAGCAATAACTGAATTAAGAAACCCAGTTTCCTGGAAAAACACCT                                                                          <  SRR4302543.2163434/94‑1 (MQ=60)

                    CCATAAGCGATGTCCAGACAAAGATTTTCTGTTTCTACTTTATGATCATAATCAATAACTGAATTAAGAAACCCAGTTTCCTGGAAAAACACCT                                                                          <  SRR4302543.6099382/94‑1 (MQ=60)

                    CCATAAGCGATGTCCAGACAAAGATTTTCTGTTTCTACTTTATGATCATAATCAATAACTGAATTAAGAAACCCAGTTTCCTGGAAAAACACCT                                                                          >  SRR4302543.7295701/1‑94 (MQ=60)

                    CCATAAGCGATGTCCAGACAAAGATTTTCTGTTTCTACTTTATGATCATAATCAATAACTGAATTAAGAAACCCAGTTTCCTGGAAAAACACCT                                                                          <  SRR4302543.2163435/94‑1 (MQ=60)

                    CCATAAGCGATGTCCAGACAAAGATTTTCTGTTTCTACTTTATGATCATAATCAATAACTGAATTAAGAAACCCAGTTTCCTGGAAAAACACCT                                                                          >  SRR4302543.5521110/1‑94 (MQ=60)

                     CATAAGCGATGTCCAGACAAAGATTTTCTGTTTCTACTTTATGATCATAATCAATAACTGAATTAAGAAACCCAGTTTCCTGGAAAAACACCTG                                                                         <  SRR4302543.6070880/94‑1 (MQ=60)

                     CATAAGCGATGTCCAGACAAAGATTTTCTGTTTCTACTTTATGATCATAATCAATAACTGAATTAAGAAACCCAGTTTCCTGGAAAAACACCTG                                                                         >  SRR4302543.350396/1‑94 (MQ=60)

                     CATAAGCGATGTCCAGACAAAGATTTTCTGTTTCTACTTTATGATCATAATCAATAACTGAATTAAGAAACCCAGTTTCCTGGAAAAACACCTG                                                                         >  SRR4302543.7446811/1‑94 (MQ=60)

                      ATAAGCGATGTCCAGACAAAGATTTTCTGTTTCTACTTTATGATCATAATCAATAACTGAATTAAGAAACCCAGTTTCCTGGAAAAACACCTGC                                                                        <  SRR4302543.6470686/94‑1 (MQ=60)

                      ATAAGCGATGTCCAGACAAAGATTTTCTGTTTCTACTTTATGATCATAATCAATAACTGAATTAAGAAACCCAGTTTCCTGGAAAAACACCTGC                                                                        >  SRR4302543.3114919/1‑94 (MQ=60)

                      ATAAGCGATGTCCAGACAAAGATTTTCTGTTTCTACTTTATGATCATAATCAATAACTGAATTAAGAAACCCAGTTTCCTGGAAAAACACCTGC                                                                        >  SRR4302543.5141260/1‑94 (MQ=60)

                      ATAAGCGATGTCCAGACAAAGATTTTCTGTTTCTACTTTATGATCATAATCAATAACTGAATTAAGAAACCCAGTTTCCTGGAAAAACACCTGC                                                                        >  SRR4302543.5686364/1‑94 (MQ=60)

                       TAAGCGATGTCCAGACAAAGATTTTCTGTTTCTACTTTATGATCATAATCAATAACTGAATTAAGAAACCCAGTTTCCTGGAAAAACCCCTGCT                                                                       <  SRR4302543.6569837/94‑1 (MQ=60)

                       TAAGCGATGTCCAGACAAAGATTTTCTGTTTCTACTTTATGATCATAATCAATAACTGAATTAAGAAACCCAGTTTCCTGGAAAAACACCTGCT                                                                       >  SRR4302543.5882488/1‑94 (MQ=60)

                        AAGCGATGTCCAGACAAAGATTTTCTGTTTCTACTTTATGATCATAATCAATAACTGAATTAAGAAACCCAGTTTCCTGGAAAAACACCTGCTG                                                                      <  SRR4302543.2674167/94‑1 (MQ=60)

                         AGCGATGTCCAGACAAAGATTTTCTGTTTCTACTTTATGATCATAATCAATAACTGAATTAAGAAACCCAGTTTCCTGGAAAAACACCTGCTGC                                                                     >  SRR4302543.3415667/1‑94 (MQ=60)

                         AGCGATGTCCAGACAAAGATTTTCTGTTTCTACTTTATGATCATAATCAATAACTGAATTAAGAAACCCAGTTTCCTGGAAAAACACCTGCTGC                                                                     <  SRR4302543.439175/94‑1 (MQ=60)

                            GATGTCCAGACAAAGATTTTCTGTTTCTACTTTATGATCATAATCAATAACTGAATTAAGAAACCCAGTTTCCTGGAAAAACACCTGCTGCATT                                                                  >  SRR4302543.3929950/1‑94 (MQ=60)

                               GTCCAGACAAAGATTTTCTGTTTCTACTTTATGATCATAATCAATAACTGAATTAAGAAACCCAGTTTCCTGGAAAAACACCTGCTGCATTATT                                                               >  SRR4302543.2655711/1‑94 (MQ=60)

                               GTCCAGACAAAGATTTTCTGTTTCTACTTTATGATCATAATCAATAACTGAATTAAGAAACCCAGTTTCCTGGAAAAACACCTGCTGCATTATT                                                               >  SRR4302543.6681535/1‑94 (MQ=60)

                                TCCAGACAAAGATTTTCTGTTTCTACTTTATGATCATAATCAATAACTGAATTAAGAAACCCAGTTTCCTGGAAAAACACCTGCTGCATTATTT                                                              <  SRR4302543.2947205/94‑1 (MQ=60)

                                 CCAGACAAAGATTTTCTGTTTCTACTTTATGATCATAATCAATAACTGAATTAAGAAACCCAGTTTCCTGGAAAAACACCTGCTGCATTATTTC                                                             <  SRR4302543.3805249/94‑1 (MQ=60)

                                 CCAGACAAAGATTTTCTGTTTCTACTTTATGATCATAATCAATAACTGAATTAAGAAACCCAGTTTCCTGGAAAAACACCTGCTGCATTATTTC                                                             <  SRR4302543.7700731/94‑1 (MQ=60)

                                   AGACAAAGATTTTCTGTTTCTACTTTATGATCATAATCAATAACTGAATTAAGAAACCCAGTTTCCTGGAAAAACACCTGCTGCATTATTTCCT                                                           <  SRR4302543.5553176/94‑1 (MQ=60)

                                    GACAAAGATTTTCTGTTTCTACTTTATGATCATAATCAATAACTGAATTAAGAAACCCAGTTTCCTGGAAAAACACCTGCTGCATTATTTCCTC                                                          <  SRR4302543.4365477/94‑1 (MQ=60)

                                    GACAAAGATTTTCTGTTTCTACTTTATGATCATAATCAATAACTGAATTAAGAAACCCAGTTTCCTGGAAAAACACCTGCTGCATTATTTCCTC                                                          <  SRR4302543.7418052/94‑1 (MQ=60)

                                     ACAAAGATTTTCTGTTTCTACTTTATGATCATAATCAATAACTGAATTAAGAAACCCAGTTTCCTGGAAAAACACCTGCTGCATTATTTCCTCC                                                         <  SRR4302543.2654943/94‑1 (MQ=60)

                                     ACAAAGATTTTCTGTTTCTACTTTATGATCATAATCAATAACTGAATTAAGAAACCCAGTTTCCTGGAAAAACACCTGCTGCATTATTTCCTCC                                                         >  SRR4302543.424698/1‑94 (MQ=60)

                                     ACAAAGATTTTCTGTTTCTACTTTATGATCATAATCAATAACTGAATTAAGAAACCCAGTATCCTGGAAAAACACCTGCTGCATTATTTCCTCC                                                         >  SRR4302543.7698933/1‑94 (MQ=60)

                                      CAAAGATTTTCTGTTTCTACTTTATGATCATAATCAATAACTGAATTAAGAAACCCAGTTTCCTGGAAAAACACCTGCTGCATTATTTCCTCCG                                                        <  SRR4302543.4802928/94‑1 (MQ=60)

                                      CAAAGATTTTCTGTTTCTACTTTATGATCATAATCAATAACTGAATTAAGAAACCCAGTTTCCTGGAAAAACACCTGCTGCATTATTTCCTCCG                                                        <  SRR4302543.1496579/94‑1 (MQ=60)

                                      CAAAGATTTTCTGTTTCTACTTTATGATCATAATCAATAACTGAATTAAGAAACCCAGTTTCCTGGAAAAACACCTGCTGCATTATTTCCTCCG                                                        <  SRR4302543.2082519/94‑1 (MQ=60)

                                      CAAAGATTTTCTGTTTCTACTTTATGATCATAATCAATAACTGAATTAAGAAACCCAGTTTCCTGGAAAAACACCTGCTGCATTATTTCCTCCG                                                        <  SRR4302543.6249719/94‑1 (MQ=60)

                                      CAAAGATTTTCTGTTTCTACTTTATGATCATAATCAATAACTGAATTAAGAAACCCAGTTTCCTGGAAAAACACCTGCTGCATTATTTCCTCCG                                                        <  SRR4302543.6291018/94‑1 (MQ=60)

                                      CAAAGATTTTCTGTTTCTACTTTATGATCATAATCAATAACTGAATTAAGAAACCAAGTTTCCTGGAAAAACACCTGCTGCATTATTTCCTCCG                                                        <  SRR4302543.136289/94‑1 (MQ=60)

                                       AAAGATTTTCTGTTTCTACTTTATGATCATAATCAATAACTGAATTAAGAAACCCAGTTTCCTGGAAAAACACCTGCTGCATTATTTCCTCCGG                                                       >  SRR4302543.253486/1‑94 (MQ=60)

                                       AAAGATTTTCTGTTTCTACTTTATGATCATAATCAATAACTGAATTAAGAAACCCAGTTTCCTGGAAAAACACCTGCTGCATTATTTCCTCCGG                                                       <  SRR4302543.2279783/94‑1 (MQ=60)

                                       AAAGATTTTCTGTTTCTACTTTATGATCATAATCAATAACTGAATTAAGAAACCCAGTTTCCTGGAAAAACACCTGCTGCATTATTTCCTCCGG                                                       <  SRR4302543.1179678/94‑1 (MQ=60)

                                         AGATTTTCTGTTTCTACTTTATGATCATAATCAATAACTGAATTAAGAAACCCAGTTTCCTGGAAAAACACCTGCTGCATTATTTCCTCCGGGA                                                     >  SRR4302543.7380970/1‑94 (MQ=60)

                                         AGATTTTCTGTTTCTACTTTATGATCATAATCAATAACTGAATTAAGAAACCCAGTTTCCTGGAAAAACACCTGCTGCATTATTTCCTCCGGGA                                                     >  SRR4302543.7856428/1‑94 (MQ=60)

                                          GATTTTCTGTTTCTACTTTATGATCATAATCAATAACTGAATTAAGAAACCCAGTTTCCTGGAAAAACACCTGCTGCATTATTTCCTCCGGGAA                                                    >  SRR4302543.3560179/1‑94 (MQ=60)

                                          GATTTTCTGTTTCTACTTTATGATCATAATCAATAACTGAATTAAGAAACCCAGTTTCCTGGAAAAACACCTGCTGCATTATTTCCTCCGGGAA                                                    >  SRR4302543.1698703/1‑94 (MQ=60)

                                           ATTTTCTGTTTCTACTTTATGATCATAATCAATAACTGAATTAAGAAACCCAGTTTCCTGGAAAAACACCTGCTGCATTATTTCCTCCGGGAAA                                                   >  SRR4302543.7848344/1‑94 (MQ=60)

                                            TTTTCTGTTTCTACTTTATGATCATAATCAATAACTGAATTAAGAAACCCAGTTTCCTGGAAAAACACCTGCTGCATTATTTCCTCCGGGAAAT                                                  <  SRR4302543.6627795/94‑1 (MQ=60)

                                              TTCTGTTTCTACTTTATGATCATAATCAATAACTGAATTAAGAAACCCAGTTTCCTGGAAAAACACCTGCTGCATTATTTCCTCCGGGAAATAG                                                >  SRR4302543.5181312/1‑94 (MQ=60)

                                              TTCTGTTTCTACTTTATGATCATAATCAATAACTGAATTAAGAAACCCAGTTTCCTGGAAAAACACCTGCTGCATTATTTCCTCCGGGAAATAG                                                <  SRR4302543.2287292/94‑1 (MQ=60)

                                              TTCTGTTTCTACTTTATGATCATAATCAATAACTGAATTAAGAAACCCAGTTTCCTGGAAAAACACCTGCTGCATTATTTCCTCCGGGAAATAG                                                >  SRR4302543.7012222/1‑94 (MQ=60)

                                              TTCTGTTTCTACTTTATGATCATAATCAATAACTGAATTAAGAAACCCAGTTTCCTGGAAAAACACCTGCTGCATTATTTCCTCCGGGAAATAG                                                <  SRR4302543.2980959/94‑1 (MQ=60)

                                              TTCTGTTTCTACTTTATGATCATAATCAATAACTGAATTAAGAAACCCAGTTTCCTGGAAAAACACCTGCTGCATTATTTCCTCCGGGAAATAG                                                <  SRR4302543.846088/94‑1 (MQ=60)

                                              TTCTGTTTCTACTTTATGATCATAATCAATAACTGAATTAAGAAACCCAGTTTCCTGGAAAAACACCTGCTGCATTATTTCCTCCGGGAAATAG                                                >  SRR4302543.2671076/1‑94 (MQ=60)

                                               TCTGTTTCTACTTTATGATCATAATCAATAACTGAATTAAGAAACCCAGTTTCCTGGAAAAACACCTGCTGCATTATTTCCTCCGGGAAATAGC                                               <  SRR4302543.6153434/94‑1 (MQ=60)

                                               TCTGTTTCTACTTTATGATCATAATCAATAACTGAATTAAGAAACCCAGTTTCCTGGAAAAACACCTGCTGCATTATTTCCTCCGGGAAATAGC                                               >  SRR4302543.6404687/1‑94 (MQ=60)

                                               TCTGTTTCTACTTTATGATCATAATCAATAACTGAATTAAGAAACCCAGTTTCCTGGAAAAACACCTGCTGCATTATTTCCTCCGGGAAATAGC                                               <  SRR4302543.6839947/94‑1 (MQ=60)

                                               TCTGTTTCTACTTTATGATCATAATCAATAACTGAATTAAGAAACCCAGTTTCCTGGAAAAACACCTGCTGCATTATTTCCTCCGGGAAATAGC                                               >  SRR4302543.6149710/1‑94 (MQ=60)

                                                TTGTTTCTACTTTATGATCATAATCAATAACTGAATTAAGAAACCCAGTTTCCTGGAAAAACACCTGCTGCATTATTTCCTCCGGGAAATAGCA                                              <  SRR4302543.6010082/94‑1 (MQ=60)

                                                CTGTTTCTACTTTATGCTCATAATCAATAACTGAATTAAGAAACCCAGTTTCCTGGAACAACACCTGCTGCATTATTTCCTCCGGGAAATCGCA                                              >  SRR4302543.3633313/1‑94 (MQ=60)

                                                CTGTTTCTACTTTATGATCATAATCAATAACTGAATTAAGAAACCCAGTTTCCTGGAAAAACACCTGCTGCATTATTTCCTCCGGGAAATAGCA                                              >  SRR4302543.6440231/1‑94 (MQ=60)

                                                CTGTTTCTACTTTATGATCATAATCAATAACTGAATTAAGAAACCCAGTTTCCTGGAAAAACACCTGCTGCATTATTTCCTCCGGGAAATAGCA                                              >  SRR4302543.2181763/1‑94 (MQ=60)

                                                CTGTTTCTACTTTATGATCATAATCAATAACTGAATTAAGAAACCCAGTTTCCTGGAAAAACACCTGCTGCATTATTTCCTCCGGGAAATAGCA                                              <  SRR4302543.816912/94‑1 (MQ=60)

                                                 TGTTTCTACTTTATGATCATAATCAATAACTGAATTAAGAAACCCAGTTTCCTGGAAAAACGCCTGCTGCATTATTTCCTCCGGGAAATAGCAG                                             <  SRR4302543.1788064/94‑1 (MQ=60)

                                                 TGTTTCTACTTTATGATCATAATCAATAACTGAATTAAGAAACCCAGTTTCCTGGAAAAACACCTGCTGCATTATTTCCTCCGGGAAATAGCAG                                             >  SRR4302543.1614049/1‑94 (MQ=60)

                                                 TGTTTCTACTTTATGATCATAATCAATAACTGAATTAAGAAACCCAGTTTCCTGGAAAAACACCTGCTGCATTATTTCCTCCGGGAAATAGCAG                                             >  SRR4302543.5465552/1‑94 (MQ=60)

                                                 TGTTTCTACTTTATGATCATAATCAATAACTGAATTAAGAAACCCAGTTTCCTGGAAAAACACCTGCTGCATTATTTCCTCCGGGAAATAGCAG                                             <  SRR4302543.7417366/94‑1 (MQ=60)

                                                  GTTTCTACTTTATGATCATAATCAATAACTGAATTAAGAAACCCAGTTTCCTGGAAAAACACCTGCTGCATTATTTCCTCCGGGAAATAGCAGA                                            >  SRR4302543.7317777/1‑94 (MQ=60)

                                                    TTCTACTTTATGATCATAATCAATAACTGAATTAAGAAACCCAGTTTCCTGGAAAAACACCTGCTGCATTATTTCCTCCGGGAAATAGCAGAAA                                          <  SRR4302543.3286704/94‑1 (MQ=60)

                                                     TCTACTTTATGATCATAATCAATAACTGAATTAAGAAACCCAGTTTCCTGGAAAAACACCTGCTGCATTATTTCCTCCGGGAAATAGCAGAAAA                                         >  SRR4302543.30934/1‑94 (MQ=60)

                                                     GCTACTTTAAGAGCATAATCAATAACTGAATTAAGAAACCCAGTTTCCTGGAAAAACACCTGCTGCATTATTTCCTCCGGGAAATAGCAGAAAT                                         <  SRR4302543.2352051/94‑1 (MQ=60)

                                                      CTACTTTATGATCATAATCAATAACTGAATTAAGAAACCCAGTTTCCTGGAAAAACACCTGCTGCATTATTTCCTCCGGGAAATAGCAGAAATA                                        <  SRR4302543.4433243/94‑1 (MQ=60)

                                                       TACTTTATGATCATAATCAATAACTGAATTAAGAAACCCAGTTTCCTGGAAAAACACCTGCTGCATTATTTCCTCCGGGAAATAGCAGAAATAA                                       <  SRR4302543.2887610/94‑1 (MQ=60)

                                                       TACTTTATGATCATAATCAATAACTGAATTAAGAAACCCAGTTTCCTGGAAAAACACCTGCTGCATTATTTCCTCCGGGAAATAGCAGAAATAA                                       <  SRR4302543.2855709/94‑1 (MQ=60)

                                                       TACTTTATGATCATAATCAATAACTGAATTAAGAAACCCAGTTTCCTGGAAAAACAACTGCTGCATTATTTCCTCCGGGAAATAGCAGAAATAA                                       >  SRR4302543.3200425/1‑94 (MQ=60)

                                                        ACTTTATGATCATAATCAATAACTGAATTAAGAAACCCAGTTTCCTGGAAAAACACCTGCTGCATTATTTCCTCCGGGAAATAGCAGAAATAAT                                      <  SRR4302543.4267949/94‑1 (MQ=60)

                                                         CTTTATGATCATAATCAATAACTGAATTAAGAAACCCAGTTTCCTGGAAAAACACCTGCTGCATTATTTCCTCCGGGAAATAGCAGAAATAATT                                     <  SRR4302543.6954244/94‑1 (MQ=60)

                                                         CTTTATGATCATAATCAATAACTGAATTAAGAAACCCAGTTTCCTGGAAAAACACCTGCTGCATTATTTCCTCCGGGAAATAGCAGAAATAATT                                     >  SRR4302543.828160/1‑94 (MQ=60)

                                                          TTTATGATCATAATCAATAACTGAATTAAGAAACCCAGTTTCCTGGAAAAACACCTGCTGCATTATTTCCTCCGGGAAATAGCAGAAATAATTA                                    >  SRR4302543.7270307/1‑94 (MQ=60)

                                                          TTTATGATCATAATCAATAACTGAATTAAGAAACCCAGTTTCCTGGAAAAACACCTGCTGCATTATTTCCTCCGGGAAATAGCAGAAATAATTA                                    <  SRR4302543.2918396/94‑1 (MQ=60)

                                                          TTTATGATCATAATCAATAACTGAATTAAGAAACCCAGTTTCCTGGAAAAACACCTGCTGCATTATTTCCTCCGGGAAATAGCAGAAATAATTA                                    >  SRR4302543.7439570/1‑94 (MQ=60)

                                                          TTTATGATCATAATCAATAACTGAATTAAGAAACCCAGTTTCCTGGAAAAACACCTGCTGCATTATTTCCTCCGGGAAATAGCAGAAATAATTA                                    <  SRR4302543.7509290/94‑1 (MQ=60)

                                                          TTTAGGATCATAATCAATAACTGAACTAAGAAACCCAGTTTCCTGGAAAAACACCTGCTGCATTATTTCCTCCGGGAAATAGCAGAAATAATTA                                    <  SRR4302543.2918397/94‑1 (MQ=60)

                                                           TTATGATCATAATCAATAACTGAATTAAGAAACCCAGTTTCCTGGAAAAACACCTGCTGCATTATTTCCTCCGGGAAATAGCAGAAATAATTAC                                   >  SRR4302543.7947524/1‑94 (MQ=60)

                                                           TTATGATCATAATCAATAACTGAATTAAGAAACCCAGTTTCCTGGAAAAACACCTGCTGCATTATTTCCTCCGGGAAATAGCAGAAATAATTAC                                   <  SRR4302543.4691583/94‑1 (MQ=60)

                                                            TATGATCATAATCAATAACTGAATTAAGAAACCCAGTTTCCTGGAAAAACACCTGCTGCATTATTTCCTCCGGGAAATAGCAGAAATAATTACC                                  <  SRR4302543.5226994/94‑1 (MQ=60)

                                                            TATGATCATAAACAATAACTGAATTAAGAAACCCAGTTTCCTGGAAAAACACCTGCTGCATTATTTCCTCCGGGAAATAGCAGAAATAATTACC                                  <  SRR4302543.7894715/94‑1 (MQ=60)

                                                             ATGATCATAATCAATAACTGAATTAAGAAACCCAGTTTCCTGGAAAAACACCTGCTGCATTATTTCCTCCGGGAAATAGCAGAAATAATTACCT                                 >  SRR4302543.1464224/1‑94 (MQ=60)

                                                             ATGATCATAATCAATAACTGAATTAAGAAACCCAGTTTCCTGGAAAAACACCTGCTGCATTATTTCCTCCGGGAAATAGCAGAAATAATTACCT                                 <  SRR4302543.3083996/94‑1 (MQ=60)

                                                             ATGATCATAATCAATAACTGAATTAAGAAACCCAGTTTCCTGGAAAAACACCTGCTGCATTATTTCCTCCGGGAAATAGCAGAAATAATTACCT                                 <  SRR4302543.6370178/94‑1 (MQ=60)

                                                             ATGATCATAATCAATAACTGAATTAAGAAACCCAGTTTCCTGGAAAAACACCTGCTGCATTATTTCCTCCGGGAAATAGCAGAAATAATTACCT                                 >  SRR4302543.7174544/1‑94 (MQ=60)

                                                              TGATCATAATCAATAACTGAATTAAGAAACCCAGTTTCCTGGAAAAACACCTGCTGCATTATTTCCTCCGGGAAATAGCAGAAATAATTACCTT                                >  SRR4302543.798286/1‑94 (MQ=60)

                                                              TGATCATAATCAATAACTGAATTAAGAAACCCAGTTTCCTGGAAAAACACCTGCTGCATTATTTCCTCCGGGAAATAGCAGAAATAATTACCTT                                <  SRR4302543.1130678/94‑1 (MQ=60)

                                                               GATCATAATCAATAACTGAATTAAGAAACCCAGTTTCCTGGAAAAACACCTGCTGCATTATTTCCTCCGGGAAATAGCAGAAATAATTACCTTA                               >  SRR4302543.7482949/1‑94 (MQ=60)

                                                               GATCATAATCAATAACTGAATTAAGAAACCCAGTTTCCTGGAAAAACACCTGCTGCATTATTTCCTCCGGGAAATAGCAGAAATAATTACCTTA                               <  SRR4302543.6746332/94‑1 (MQ=60)

                                                               GATCATAATCAATAACTGAATTAAGAAACCCAGTTTCCTGGAAAAACACCTGCTGCATTATTTCCTCCGGGAAATAGCAGAAATAATTACCTTA                               >  SRR4302543.3576530/1‑94 (MQ=60)

                                                                TTCATAATCAATAACTGAATTAAGAAACCCAGTTTCCTtgattaacaccagttgtacttctgcctctgggaaatagcagtaataaataccttat                              >  SRR4302543.7068961/1‑38 (MQ=60)

                                                                ATCATAATCAATAACTGAATTAAGAAACCCAGTTTCCTGGAAAAACACCTGCTGCATTATTTCCTCCGGGAAATAGCAGAAATAATTACCTTAT                              <  SRR4302543.5596068/94‑1 (MQ=60)

                                                                ATCATAATCAATAACTGAATTAAGAAACCCAGTTTCCTGGAAAAACACCTGCTGCATTATTTCCTCCGGGAAATAGCAGAAATAATTACCTTAT                              <  SRR4302543.7334229/94‑1 (MQ=60)

                                                                ATCATAATCAATAACTGAATTAAGAAACCCAGTTTCCTGGAAAAACACCTGCTGCATTATTTCCTCCGGGAAATAGCAGAAATAATTACCTTAT                              <  SRR4302543.2456573/94‑1 (MQ=60)

                                                                ATCATAATCAATAACTGAATTAAGAAACCCAGTTTCCTGGAAAAACACCTGCTGCATTATTTCCTCCGGGAAATAGCAGAAATAATTACCTTAT                              <  SRR4302543.101599/94‑1 (MQ=60)

                                                                  CATAATCAATAACTGAATTAAGAAACCCAGTTTCCTGGAAAAACACCTGCTGCATTATTTCCTCCGGGAAATAGCAGAAATAATTACCTTATGT                            >  SRR4302543.3979132/1‑94 (MQ=60)

                                                                  CATAATCAATAACTGAATTAAGAAACCCAGTTTCCTGGAAAAACACCTGCTGCATTATTTCCTCCGGGAAATAGCAGAAATAATTACCTTATGT                            <  SRR4302543.1121647/94‑1 (MQ=60)

                                                                  CATAATCAATAACTGAATTAAGAAACCCAGTTTCCTGGAAAAACACCTGCTGCATTATTTCCTCCGGGAAATAGCAGAAATAATTACCTTATGT                            >  SRR4302543.1146351/1‑94 (MQ=60)

                                                                  CATAATCAATAACTGAATTAAGAAACCCAGTTTCCTGGAAAAACACCTGCTGCATTATTTCCTCCGGGAAATAGCAGAAATAATTACCTTATGT                            >  SRR4302543.1146350/1‑94 (MQ=60)

                                                                   ATAATCAATAACTGAATTAAGAAACCCAGTTTCCTGGAAAAACACCTGCTGCATTATTTCCTCCGGGAAATAGCAGAAATAATTACCTTATGTA                           >  SRR4302543.5137980/1‑94 (MQ=60)

                                                                   ATAATCAATAACTGAATTAAGAAACCCAGTTTCCTGGAAAAACACCTGCTGCATTATTTCCTCCGGGAAATAGCAGAAATAATTACCTTATGTA                           >  SRR4302543.2774935/1‑94 (MQ=60)

                                                                   ATAATCAATAACTGAATTAAGAAACCCAGTTTCCTGGAAAAACACCTGCTGCATTATTTCCTCCGGGAAATAGCAGAAATAATTACCTTATGTA                           <  SRR4302543.2713063/94‑1 (MQ=60)

                                                                   ATAATCAATAACTGAATTAAGAAACCCAGTTTCCTGGAAAAACACCTGCTGCATTATTTCCTCCGGGAAATAGCAGAAATAATTACCTTATGTA                           <  SRR4302543.4515173/94‑1 (MQ=60)

                                                                    TAATCAATAACTGAATTAAGAAACCCAGTTTCCTGGAAAAACACCTGCTGCATTATTTCCTCCGGGAAATAGCAGAAATAATTACCTTATGTAA                          >  SRR4302543.4256847/1‑94 (MQ=60)

                                                                    TAATCAATAACTGAATTAAGAAACCCAGTTTCCTGGAAAAACACCTGCTGCATTATTTCCTCCGGGAAATAGCAGAAATAATTACCTTATGTAA                          <  SRR4302543.313609/94‑1 (MQ=60)

                                                                     AATCAATAACTGAATTAAGAAACCCAGTTTCCTGGAAAAACACCTGCTGCATTATTTCCTCCGGGAAATAGCAGAAATAATTACCTTATGTAAT                         <  SRR4302543.5224621/94‑1 (MQ=60)

                                                                      ATCAATAACTGAATTAAGAAACCCAGTTTCCTGGAAAAACACCTGCTGCATTATTTCCTCCGGGAAATAGCAGACATAATTACCTTATGTAATC                        >  SRR4302543.4109390/1‑94 (MQ=60)

                                                                      ATCAATAACTGAATTAAGAAACCCAGTTTCCTGGAAAAACACCTGCTGCATTATTTCCTCCGGGAAATAGCAGAAATAATTACCTTATGTAATC                        <  SRR4302543.5950700/94‑1 (MQ=60)

                                                                      ATCAATAACTGAATTAAGAAACCCAGTTTCCTGGAAAAACACCTGCTGCATTATTTCCTCCGGGAAATAGCAGAAATAATTACCTTATGTAATC                        <  SRR4302543.7521512/94‑1 (MQ=60)

                                                                        CAATAACTGAATTAAGAAACCCAGTTTCCTGGAAAAACACCTGCTGCATTATTTCTTCCGGGAAATAGCAGAAATAATTACCTTATGTAATCTA                      >  SRR4302543.2603515/1‑94 (MQ=60)

                                                                        CAATAACTGAATTAAGAAACCCAGTTTCCTGGAAAAACACCTGCTGCATTATTTCCTCCGGGAAATAGCAGAAATAATTACCTTATGTAATCTA                      >  SRR4302543.667639/1‑94 (MQ=60)

                                                                        CAATAACTGAATTAAGAAACCCAGTTTCCTGGAAAAACACCTGCTGCATTATTTCCTCCGGGAAATAGCAGAAATAATTACCTTATGTAATCTA                      >  SRR4302543.667640/1‑94 (MQ=60)

                                                                        CAATAACTGAATTAAGAAACCCAGTTTCCTGGAAAAACACCTGCTGCATTATTTCCTCCGGGAAATAGCAGAAATAATTACCTTATGTAATCTA                      >  SRR4302543.2603514/1‑94 (MQ=60)

                                                                         AATAACTGAATTAAGAAACCCAGTTTCCTGGAAAAACACCTGCTGCATTATTTCCTCCGGGAAATAGCAGAAATAATTACCTTATGTAATCTAT                     >  SRR4302543.1737863/1‑94 (MQ=60)

                                                                         AATAACTGAATTAAGAAACCCAGTTTCCTGGAAAAACACCTGCTGCATTATTTCCTCCGGGAAATAGCAGAAATAATTACCTTATGTAATCTAT                     >  SRR4302543.5137699/1‑94 (MQ=60)

                                                                          ATAACTGAATTAAGAAACCCAGTTTCCTGGAAAAACACCTGCTGCATTATTTCCTCCGGGAAATAGCAGAAATAATTACCTTATGTAATCTATC                    <  SRR4302543.5190616/94‑1 (MQ=60)

                                                                          ATAACTGAATTAAGAAACCCAGTTTCCTGGAAAAACACCTGCTGCATTATTTCCTCCGGGAAATAGCAGAAATAATTACCTTATGTAATCTATC                    <  SRR4302543.1960403/94‑1 (MQ=60)

                                                                          ATAACTGAATTAAGAAACCCAGTTTCCTGGAAAAACACCTGCTGCATTATTTCCTCCGGGAAATAGCAGAAATAATTACCTTATGTAATCTATC                    >  SRR4302543.3008229/1‑94 (MQ=60)

                                                                          ATAACTGAATTAAGAAACCCAGTTTCCTGGAAAAACACCTGCTGCATTATTTCCTCCGGGAAATAGCAGAAATAATTACCTTATGTAATCTATC                    >  SRR4302543.3020213/1‑94 (MQ=60)

                                                                           TAACTGAATTAAGAAACCCAGTTTCCTGGAAAAACACCTGCTGCATTATTTCCTCCGGGAAATAGCAGAAATAATTACCTTATGTAATCTATCG                   <  SRR4302543.6115529/94‑1 (MQ=60)

                                                                           TAACTGAATTAAGAAACCCAGTTTCCTGGAAAAACACCTGCTGCATTATTTCCTCCGGGAAATAGCAGAAAAAATTACCTTATGTAATCTATCG                   >  SRR4302543.2030585/1‑94 (MQ=60)

                                                                            AACTGAATTAAGAAACCCAGTTTCCTGGAAAAACACCTGCTGCATTATTTCCTCCGGGAAATAGCAGAAATAATTACCTTATGTAATCTATCGT                  >  SRR4302543.5882589/1‑94 (MQ=60)

                                                                            AACTGAATTAAGAAACCCAGTTTCCTGGAAAAACACCTGCTGCATTATTTCCTCCGGGAAATAGCAGAAATAATTACCTTATGTAATCTATCGT                  >  SRR4302543.621907/1‑94 (MQ=60)

                                                                            AACTGAATTAAGAAACCCAGTTTCCTGGAAAAACACCTGCTGCATTATTTCCTCCGGGAAATAGCAGAAATAATTACCTTATGTAATCTATCGT                  <  SRR4302543.7632250/94‑1 (MQ=60)

                                                                            AACTGAATTAAGAAACCCAGTTTCCTGGAAAAACACCTGCTGCATTATTTCCTCCGGGAAATAGCAGAAATAATTACCTTATGTAATCTATCGT                  >  SRR4302543.6473545/1‑94 (MQ=60)

                                                                            AACTGAATTAAGAAACCCAGTTTCCTGGAAAAACACCTGCTGCATTATTTCCTCCGGGAAATAGCAGAAATAATTACCTTATGTAATCTATCGT                  >  SRR4302543.7429236/1‑94 (MQ=60)

                                                                            AACTGAATTAAGAAACCCAGTTTCCTGGAAAAACACCTGCTGCATTATTTCCTCCGGGAAATAGCAGAAATAATTACCTTATGTAATCTATCGT                  <  SRR4302543.4125550/94‑1 (MQ=60)

                                                                             ACTGAATTAAGAAACCCAGTTTCCTGGAAAAACACCTGCTGCATTATTTCCTCCGGGAAATAGCAGAAATAATTACCTTATGTAATCTATCGTA                 <  SRR4302543.4231083/94‑1 (MQ=60)

                                                                               TGAATTAAGAAACCCAGTTTCCTGGAAAAACACCTGCTGCATTATTTCCTCCGGGAAATAGCAGAAATAATTACCTTATGTAATCTATCGTAAT               >  SRR4302543.1936810/1‑94 (MQ=60)

                                                                               TGAATTAAGAAACCCAGTTTCCTGGAAAAACACCTGCTGCATTATTTCCTCCGGGAAATAGCAGAAATAATTACCTTATGTAATCTATCGTAAT               >  SRR4302543.6567970/1‑94 (MQ=60)

                                                                                GAATTAAGAAACCCAGTTTCCTGGAAAAACACCTGCTGCATTATTTCCTCCGGGAAATAGCAGAAATAATTACCTTATGTAATCTATCGTAATA              >  SRR4302543.326465/1‑94 (MQ=60)

                                                                                  ATTAAGAAACCCAGTTTCCTGGAAAAACACCTGCTGCATTATTTCCTCCGGGAAATAGCAGAAATAATTACCTTATGTAATCTATCGTAATACT            <  SRR4302543.6526708/94‑1 (MQ=60)

                                                                                   TTAAGAAACCCAGTTTCCTGGAAAAACACCTGCTGCATTATTTCCTCCGGGAAATAGCAGAAATAATTACCTTATGTAATCTATCGTAATACTT           >  SRR4302543.5822537/1‑94 (MQ=60)

                                                                                    TAAGAAACCCAGTTTCCTGGAAAAACACCTGCTGCATTATTTCCTCCGGGAAATAGCAGAAATAATTACCTTATGTAATCTATCGTAATACTTC          >  SRR4302543.7350417/1‑94 (MQ=60)

                                                                                     AAGAAACCGAGTTTCCTGGAAAAACACCTGCTGCATTATTTCCTCCGGTAAATAGCAGAAATAATTACCTTATGTAATCTATCGTAATACTTCG         <  SRR4302543.3738149/94‑1 (MQ=60)

                                                                                     AAGAAACCCAGTTTCCTGGAAAAACACCTGCTGCATTATTTCCTCCGGGAAATAGCAGAAATAATTACCTTATGTAATCTATCGTAATACTTCG         <  SRR4302543.1983300/94‑1 (MQ=60)

                                                                                     AAGAAACCCAGTTTCCTGGAAAAACACCTGCTGCATTATTTCCTCCGGGAAATAGCAGAAATAATTACCTTATGTAATCTATCGTAATACTTCG         >  SRR4302543.2546811/1‑94 (MQ=60)

                                                                                      AGAAACCCAGTTTCCTGGAAAAACACCTGCTGCATTATTTCCTCCGGGAAATAGCAGAAATAATTACCTTATGTAATCTATCGTAATACTTCGA        >  SRR4302543.4955078/1‑94 (MQ=60)

                                                                                       GAAACCCAGTTTCCTGGAAAAACACCTGCTGCATTATTTCCTCCGGGAAATAGCAGAAATAATTACCTTATGTAATCTATCGTAATACTTCGAT       <  SRR4302543.4636973/94‑1 (MQ=60)

                                                                                        AAACCCAGTTTCCTGGAAAAACACCTGCTGCATTATTTCCTCCGGGAAATAGCAGAAATAATTACCTTATGTAATCTATCGTAATACTTCGATT      <  SRR4302543.4690399/94‑1 (MQ=60)

                                                                                        AAACCCAGTTTCCTGGAAAAACACCTGCTGCATTATTTCCTCCGGGAAATAGCAGAAATAATTACCTTATGTAATCTATCGTAATACTTCGATT      >  SRR4302543.3179123/1‑94 (MQ=60)

                                                                                         AACCCAGTTTCCTGGAAAAACACCTGCTGCATTATTTCCTCCGGGAAATAGCAGAAATAATTACCTTATGTAATCTATCGTAATACTTCGATTG     >  SRR4302543.2094782/1‑94 (MQ=60)

                                                                                         AACCCAGTTTCCTGGAAAAACACCTGCTGCATTATTTCCTCCGGGAAATAGCAGAAATAATTACCTTATGTAATCTATCGTAATACTTCGATTG     >  SRR4302543.523493/1‑94 (MQ=60)

                                                                                         AACCCAGTTTCCTGGAAAAACACCTGCTGCATTATTTCCTCCGGGAAATAGCAGAAATAATTACCTTATGTAATCTATCGTAATACTTCGATTG     <  SRR4302543.3172270/94‑1 (MQ=60)

                                                                                         AACCCAGTTTCCTGGAAAAACACCTGCTGCATTATTTCCTCCGGGAAATAGCAGAAATAATTACCTTATGTAATCTATCGTAATACTTCGATTG     >  SRR4302543.7162436/1‑94 (MQ=60)

                                                                                          ACCCAGTTTCCTGGAAAAACACCTGCTGCATTATTTCCTCCGGGAAATAGCAGAAATAATTACCTTATGTAATCTATCGTAATACTTCGATTGG    <  SRR4302543.104973/94‑1 (MQ=60)

                                                                                          ACCCAGTTTCCTGGAAAAACACCTGCTGCATTATTTCCTCCGGGAAATAGCAGAAATAATTACCTTATGTAATCTATCGTAATACTTCGATTGG    <  SRR4302543.6483701/94‑1 (MQ=60)

                                                                                           CCCAGTTTCCTGGAAAAACACCTGCTGCATTATTTCCTCCGGGAAATAGCAGAAATAATTACCTTATGTAATCTATCGTAATACTTCGATTGGT   >  SRR4302543.2401364/1‑94 (MQ=60)

                                                                                           CCCAGTTTCCTGGAAAAACACCTGCTGCATTATTTCCTCCGGGAAATAGCAGAAATAATTACCTTATGTAATCTATCGTAATACTTCGATTGGT   >  SRR4302543.6601477/1‑94 (MQ=60)

                                                                                            CCAGTTTCCTGGAAAAACACCTGCTGCATTATTTCCTCCGGGAAATAGCAGAAATAATTACCTTATGTAATCTATCGTAATACTTCGATTGGTA  <  SRR4302543.5427599/94‑1 (MQ=60)

                                                                                            CCAGTTTCCTGGAAAAACACCTGCTGCATTATTTCCTCCGGGAAATAGCAGAAATAATTACCTTATGTAATCTATCGTAATACTTCGATTGGTA  >  SRR4302543.4366578/1‑94 (MQ=60)

                                                                                            CCAGTTTCCTGGAAAAACACCTGCTGCATTATTTCCTCCGGGAAATAGCAGAAATAATTACCTTATGTAATCTATCGTAATACTTCGATTGGTA  >  SRR4302543.3178242/1‑94 (MQ=60)

                                                                                            CCAGTTTCCTGGAAAAACACCTGCTGCATTATTTCCTCCGGGAAATAGCAGAAATAATTACCTTATGTAATCTATCGTAATACTTCGATTGGTA  >  SRR4302543.2714284/1‑94 (MQ=60)

ATAGAAAGTTTTTGTCAGTTCCATAAGCGATGTCCAGACAAAGATTTTCTGTTTCTACTTTATGATCATAATCAATAACTGAATTAAGAAACTCAGTTTCCTGGAAAAACACCTGCTGCATTATTTCCTCCGGGAAATAGCAGAAATAATTACCTTATGTAATCTATCGTAATACTTCGATTGGTA  >  NC_000913/3800565‑3800750

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 0 ≤` `ATCG/ATCG` `< 23 ≤` `ATCG/ATCG` `< 31 ≤` `ATCG/ATCG` `< 35 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`