Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.

ALE, Flask, Isolate	Predicted Mutations	Mean Coverage	Total Reads	Percent Mapped	Mapped Reads	Average Read Length
A1 F1 I1 R1	1696	279.3	15874187	97.8%	15524954	93.0

Breseq alignment

BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	3,802,880	A→G	M233T (ATG→ACG)	rfaP ←	RfaP

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	3,802,880	0	A	G	99.7%	964.6 / ‑7.0	305	M233T (ATG→ACG)	rfaP	RfaP
Reads supporting (aligned to +/- strand): ref base A (0/0); major base G (258/46); minor base C (1/0); total (259/46)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 306 total aligned reads displayed.

TTGCGTTGTGTTCGCTCTTTAATACGCTCGGCCTTAACGCTTGCCATGTTCAATAAATTCTGTTCAAGAGACAATATTTTGCGTAAAGGCATCCCAAAATAAACCTTCATAAATCGCCAGATATCTCTTTGCGTCAGGCCAATATTCATTGATGAGAAATATAAACCAATCAGGTCTTTA  >  NC_000913/3802790‑3802969

ttGCGTTGTGTTCGCTCTTTAATACGCTCGGCCTTAACGCTTGCCATGTTCAATAAATTCTGTTCCAGAGACAATATTTTGCGTAAAGGCGTc                                                                                         >  2:310395/1‑93 (MQ=255)

    gTTGTGTTCGCTCTTTAATACGCTCGGCCTTAACGCTTGCCATGTTCAATAAATTCTGTTCAAGAGACAATATTTTGCGTAAATGCGTCCCaa                                                                                     >  2:338838/1‑93 (MQ=255)

    gTTGTGTTCGCTCTTTAATACGCTCGGCCTTAACGCTTGCCATGTTCAATAAATTCTGTTCAAGAGACAATATTTTGCGTAAAGGCGTCCCaa                                                                                     >  1:7802356/1‑93 (MQ=255)

    gTTGTGTTCGCTCTTTAATACGCTCGGCCTTAACGCTTGCCATGTTCAATAAATTCTGTTCAAGAGACAATATTTTGCGTAAAGGCGTCCCaa                                                                                     >  2:6285093/1‑93 (MQ=255)

     ttGTGTTCGCTCTTTAATACGCTCGGCCTTAACGCTTGCCATGTTCAATAAATTCTGTTCAAGAGACAATATTTTGCGTAAAGGCGTCCCaaa                                                                                    >  1:5696992/1‑93 (MQ=255)

     ttGTGTTCGCTCTTTAATACGCTCGGCCTTAACGCTTGCCATGTTCAATAAATTCTGTTCAAGAGACAATATTTTGCGTAAAGGCGTCCCaaa                                                                                    >  2:1526024/1‑93 (MQ=255)

     ttGTGTTCGCTCTTTAATACGCTCGGCCTTAACGCTTGCCATGTTCAATAAATTCTGTTCAAGAGACAATATTTTGCGTAAAGGCGTCCCaaa                                                                                    >  1:3703353/1‑93 (MQ=255)

     ttGTGTTCGCTCTTTAATACGCTCGGCCTTAACGCTTGCCATGTTCAATAAATTCTGTTCAAGAGACAATATTTTGCGTAAAGGCGTCCCaaa                                                                                    >  1:3302868/1‑93 (MQ=255)

     ttGTGTTCGCTCTTTAATACGCTCGGCCTTAACGCTTGCCATGTTCAATAAATTCTGTTCAAGAGACAATATTTTGCGTAAAGGCGTCCCaaa                                                                                    >  1:2100301/1‑93 (MQ=255)

     ttGTGTTCGCTCTTTAATACGCTCGGCCTTAACGCTTGCCATGTTCAATAAATTCTGTTCAAGAGACAATATTTTGCGTAAAGGCGTCCCaaa                                                                                    >  1:6211062/1‑93 (MQ=255)

      tgtgTTCGCTCTTTAATACGCTCGGCCTTAACGCTTGCCATGTTCAATAAATTCTGTTCAAGAGACAATATTTTGCGTAAAGGCGTCCCaaaa                                                                                   >  2:5881004/1‑93 (MQ=255)

       gtgtTCGCTCTTTAATACGCTCGGCCTTAACGCTTGCCATGTTCAATAAATTCTGTTCAAGAGACAATATTTTGCGTAAAGGCGTCCCAAAAt                                                                                  >  1:2629760/1‑93 (MQ=255)

       gtgtTCGCTCTTTAATACGCTCGGCCTTAACGCTTGCCATGTTCAATAAATTCTGTTCAAGAGACAATATTTTGCGTAAAGGCGTCCCAAAAt                                                                                  >  2:3250826/1‑93 (MQ=255)

        tgtTCGCTCTTTAATACGCTCGGCCTTAACGCTTGCCATGTTCAATAAATTCTGTTCAAGAGACAATATTTTGCGTAAAGGCGTCCCAAAATa                                                                                 <  1:4233445/93‑1 (MQ=255)

        tgtTCGCTCTTTAATACGCTCGGCCTTAACGCTTGCCATGTTCAATAAATTCTGTTCAAGAGACAATATTTTGCGTAAAGGCGTCCCAAAATa                                                                                 >  2:4667253/1‑93 (MQ=255)

        tgtTCGCTCTTTAATACGCTCGGCCTTAACGCTTGCCATGTTCAATAAATTCTGTTCAAGAGACAATATTTTGCGTAAAGGCGTCCCAAAATa                                                                                 >  2:3711665/1‑93 (MQ=255)

         gtTCGCTCTTTAATACGCTCGGCCTTAACGCTTGCCATGTTCAATAAATTCTGTTCAAGAGACAATATTTTGCGTAAAGGCGTCCCAAAATaa                                                                                >  1:2549465/1‑93 (MQ=255)

         gtTCGCTCTTTAATACGCTCGGCCTTAACGCTTGCCATGTTCAATAAATTCTGTTCAAGAGACAATATTTTGCGTAAAGGCGTCCCAAAATaa                                                                                >  2:4426055/1‑93 (MQ=255)

          ttCGCTTTTTAATACGCTCGTCCTTAACGCTTGCCATGTTCAATAAATTCTGTTCATGAGACAATATTTTGCGTAAAGGCGTCCCAAAATaac                                                                               >  1:7032383/1‑92 (MQ=255)

          ttCGCTCTTTAATACGCTCGGCCTTAACGCTTGCCATGTTCAATAAATTCTGTTCAAGAGACAATATTTTGCGTAAAGGCGTCCCAAAATaaa                                                                               <  2:3976614/93‑1 (MQ=255)

          ttCGCTCTTTAATACGCTCGGCCTTAACGCTTGCCATGTTCAATAAATTCTGTTCAAGAGACAATATTTTGCGTAAAGGCGTCCCAAAATaaa                                                                               >  2:5326870/1‑93 (MQ=255)

           tCGCTCTTTAATACGCTCGGCCTTAACGCTTGCCATGTTCAATAAATTCTGTTCAAGAGACAATATTTTGCGTAAAGGCGTCCCAAAATAAAc                                                                              <  2:2625746/93‑1 (MQ=255)

           tCGCTCTTTAATACGCTCGGCCTTAACGCTTGCCATGTTCAATAAATTCTGTTCAAGAGACAATATTTTGCGTAAAGGCGTCCCAAAATAAAc                                                                              >  2:2214838/1‑93 (MQ=255)

             gCTCTTTAATACGCTCGGCCTTAACGCTTGCCATGTTCAATAAATTCTGTTCAAGAGACAATATTTTGCGTAAAGGCGTCCCAAAATAAACCt                                                                            <  2:4269623/93‑1 (MQ=255)

             gCTCTTTAATACGCTCGGCCTTAACGCTTGCCATGTTCAATAAATTCTGTTCAAGAGACAATATTTTGCGTAAAGGCGTCCCAAAATAAACCt                                                                            >  2:568124/1‑93 (MQ=255)

             gCTCTTTAATACGCTCGGCCTTAACGCTTGCCATGTTCAATAAATTCTGTTCAAGAGACAATATTTTGCGTAAAGGCGTCCCAAAATAAACCt                                                                            >  1:1204737/1‑93 (MQ=255)

              ctctTTAATACGCTCGGCCTTAACGCTTGCCATGTTCAATAAATTCTGTTCAAGAGACAATATTTTGCGTAAAGGCGTCCCAAAATAAACCtt                                                                           >  2:6929871/1‑93 (MQ=255)

              ctctTTAATACGCTCGGCCTTAACGCTTGCCATGTTCAATAAATTCTGTTCAAGAGACAATATTTTGCGTAAAGGCGTCCCAAAATAAACCtt                                                                           <  1:4447500/93‑1 (MQ=255)

              ctctTTAATACGCTCGGCCTTAACGCTTGCCATGTTCAATAAATTCTGTTCAAGAGACAATATTTTGCGTAAAGGCGTCCCAAAATAAACCtt                                                                           >  1:5251549/1‑93 (MQ=255)

              ctctTTAATACGCTCGGCCTTAACGCTTGCCATGTTCAATAAATTCTGTTCAAGAGACAATATTTTGCGTAAAGGCGTCCCAAAATAAACCtt                                                                           >  2:3829339/1‑93 (MQ=255)

               tctTTAATACGCTCGGCCTTAACGCTTGCCATGTTCAATAAATTCTGTTCAAGAGACAATATTTTGCGTAAAGGCGTCCCAAAATAAACCTTc                                                                          >  1:6422013/1‑93 (MQ=255)

                  ttAATACGCTCGGCCTTAACGCTTGCCATGTTCAATAAATTCTGTTCAAGAGACAATATTTTGCGTAAAGGCGTCCCAAAATAAACCTTCATa                                                                       >  2:7054729/1‑93 (MQ=255)

                    aaTACGCTCGGCCTTAACGCTTGCCATGTTCAATAAATTCTGTTCAAGAGACAATATTTTGCGTAAAGGCGTCCCAAAATAAACCTTCATaaa                                                                     >  1:3837843/1‑93 (MQ=255)

                      tACGCTCGGCCTTAACGCTTGCCATGTTCAATAAATTCTGTTCAAGAGACAATATTTTGCGTAAAGGCGTCCCAAAATAAACCTTCATAAATc                                                                   >  1:6738505/1‑93 (MQ=255)

                           tCGGCCTTAACGCTTGCCATGTTCAATAAATTCTGTTCAAGAGACAATATTTTGCGTAAAGGCGTCCCAAAATAAACCTTCATAAATCGCCAg                                                              >  2:777576/1‑93 (MQ=255)

                            cGGCCTTAACGCTTGCCATGTTCAATAAATTCTGTTCAAGAGACAATATTTTGCGTAAAGGCGTCCCAAAATAAACCTTCATAAATCGCCAGa                                                             >  2:3856984/1‑93 (MQ=255)

                            cGGCCTTAACGCTTGCCATGTTCAATAAATTCTGTTCAAGAGACAATATTTTGCGTAAAGGCGTCCCAAAATAAACCTTCATAAATCGCCAGa                                                             >  1:1232214/1‑93 (MQ=255)

                             ggCCTTAACGCTTGCCATGTTCAATAAATTCTGTTCAAGAGACAATATTTTGCGTAAAGGCGTCCCAAAATAAACCTTCATAAATCGCCAGat                                                            >  1:5016744/1‑93 (MQ=255)

                             ggCCTTAACGCTTGCCATGTTCAATAAATTCTGTTCAAGAGACAATATTTTGCGTAAAGGCGTCCCAAAATAAACCTTCATAAATCGCCAGat                                                            <  2:6403571/93‑1 (MQ=255)

                             cgCCTTAACTCTTGCCATGTTCAATAAATTCTGGTCAAGAGACAATATTTTGCGTAAAGGCGTCCCAAAATAAACCTTCATAAATCGCCAGat                                                            <  1:4010471/92‑1 (MQ=255)

                              gCCTTAACGCTTGCCATGTTCAATAAATTCTGTTCAAGAGACAATATTTTGCGTAAAGGCGTCCCAAAATAAACCTTCATAAATCGCCAGata                                                           >  2:2337895/1‑93 (MQ=255)

                              gCCTTAACGCTTGCCATGTTCAATAAATTCTGTTCAAGAGACAATATTTTGCGTAAAGGCGTCCCAAAATAAACCTTCATAAATCGCCAGata                                                           >  2:6665705/1‑93 (MQ=255)

                              gCCTTAACGCTTGCCATGTTCAATAAATTCTGTTCAAGAGACAATATTTTGCGTAAAGGCGTCCCAAAATAAACCTTCATAAATCGCCAGata                                                           >  2:4708077/1‑93 (MQ=255)

                               ccTTAACGCTTGCCATGTTCAATAAATTCTGTTCAAGAGACAATATTTTGCGTAAAGGCGTCCCAAAATAAACCTTCATAAATCGCCAGatat                                                          >  2:4601940/1‑93 (MQ=255)

                                 ttAACGCTTGCCATGTTCAATAAATTCTGTTCAAGAGACAATATTTTGCGTAAAGGCGTCCCAAAATAAACCTTCATAAATCGCCAGATAtct                                                        >  1:936802/1‑93 (MQ=255)

                                 ttAACGCTTGCCATGTTCAATAAATTCTGTTCAAGAGACAATATTTTGCGTAAAGGCGTCCCAAAATAAACCTTCATAAATCGCCAGATAtct                                                        >  1:1901881/1‑93 (MQ=255)

                                 ttAACGCTTGCCATGTTCAATAAATTCTGTTCAAGAGACAATATTTTGCGTAAAGGCGTCCCAAAATAAACCTTCATAAATCGCCAGATAtct                                                        >  1:2383768/1‑93 (MQ=255)

                                 ttAACGCTTGCCATGTTCAATAAATTCTGTTCAAGAGACAATATTTTGCGTAAAGGCGTCCCAAAATAAACCTTCATAAATCGCCAGATAtct                                                        >  2:5944772/1‑93 (MQ=255)

                                 ttAACGCTTGCCATGTTCAATAAATTCTGTTCAAGAGACAATATTTTGCGTAAAGGCGTCCCAAAATAAACCTTCATAAATCGCCAGATAtct                                                        >  1:352032/1‑93 (MQ=255)

                                 ttAACGCTTGCCATGTTCAATAAATTCTGTTCAAGAGACAATATTTTGCGTAAAGGCGTCCCAAAATAAACCTTCATAAATCGCCAGATAtct                                                        >  1:4024156/1‑93 (MQ=255)

                                 ttAACGCTTGCCATGTTCAATAAATTCTGTTCAAGAGACAATATTTTGCGTAAAGGCGTCCCAAAATAAACCTTCATAAATCGCCAGATAtct                                                        >  1:1022046/1‑93 (MQ=255)

                                  tAACGCTTGCCATGTTCAATAAATTCTGTTCAAGAGACAATATTTTGCGTAAAGGCGTCCCCAAATAAACCTTCATAAATCGCCAGATAtctc                                                       >  2:1239527/1‑93 (MQ=255)

                                   aaCGCTTGCCATGTTCAATAAATTCTGTTCAAGAGACAATATTTTGCGTAAAGGCGTCCCAAAATAAACCTTCATAAATCGCCAGATATctct                                                      >  1:3766415/1‑93 (MQ=255)

                                    aCGCTTGCCATGTTCAATAAATTCTGTTCAAGAGACAATATTTTGCGTAAAGGCGTCCCAAAATAAACCTTCATAAATCGCCAGATATCTCtt                                                     >  2:7117316/1‑93 (MQ=255)

                                      gCTTGCCATGTTCAATAAATTCTGTTCAAGAGACAATATTTTGCGTAAAGGCGTCCCAAAATAAACCTTCATAAATCGCCAGATATCTCTTTg                                                   >  1:1642792/1‑93 (MQ=255)

                                       cTTGCCATGTTCAATAAATTCTGTTCAAGAGACAATATTTTGCGTAAAGGCGTCCCAAAATAAACCTTCATAAATCGCCAGATATCTCTTTGc                                                  >  1:106172/1‑93 (MQ=255)

                                        ttGCCATGTTCAATAAATTCTGTTCAAGAGACAATATTTTGCGTAAAGGCGTCCCAAAATAAACCTTCATAAATCGCCAGATATCTCTTTGCg                                                 >  2:7635074/1‑93 (MQ=255)

                                        ttGCCATGTTCAATAAATTCTGTTCAAGAGACAATATTTTGCGTAAAGGCGTCCCAAAATAAACCTTCATAAATCGCCAGATATCTCTTTGCg                                                 >  2:5535811/1‑93 (MQ=255)

                                            cATGTTCAATAAATTCTGTTCAAGAGACAATATTTTGCGTAAAGGCGTCCCAAAATAAACCTTCATAAATCGCCAGATATCTCTTTGCGTCAg                                             >  1:1445163/1‑93 (MQ=255)

                                             aTGTTCAATAAATTCTGTTCAAGAGACAATATTTTGCGTAAAGGCGTCCCAAAATAAACCTTCATAAATCGCCAGATATCTCTTTGCGTCAgg                                            >  2:1131991/1‑93 (MQ=255)

                                             aTGTTCAATAAATTCTGTTCAAGAGACAATATTTTGCGTAAAGGCGTCCCAAAATAAACCTTCATAAATCGCCAGATATCTCTTTGCGTCAgg                                            >  1:1991768/1‑93 (MQ=255)

                                               gTTCAATAAATTCTGTTCAAGAGACAATATTTTGCGTAAAGGCGTCCCAAAATAAACCTTCATAAATCGCCAGATATCTCTTTGCGTCAGGcc                                          >  2:521543/1‑93 (MQ=255)

                                                ttCAATAAATTCTGTTCAAGAGACAATATTTTGCGTAAAGGCGTCCCAAAATAAACCTTCATAAATCGCCAGATATCTCTTTGCGTCAGGCCa                                         >  2:535683/1‑93 (MQ=255)

                                                 tCAATAAATTCTGTTCAAGAGACAATATTTTGCGTAAAGGCGTCCCAAAATAAACCTTCATAAATCGCCAGATATCTCTTTGCGTCAGGCCaa                                        >  1:4112451/1‑93 (MQ=255)

                                                 tCAATAAATTCTGTTCAAGAGACAATATTTTGCGTAAAGGCGTCCCAAAATAAACCTTCATAAATCGCCAGATATCTCTTTGCGTCAGGCCaa                                        >  1:3128505/1‑93 (MQ=255)

                                                 tCAATAAATTCTGTTCAAGAGACAATATTTTGCGTAAAGGCGTCCCAAAATAAACCTTCATAAATCGCCAGATATCTCTTTGCGTCAGGCCaa                                        <  1:5427716/93‑1 (MQ=255)

                                                  cAATAAATTCTGTTCAAGAGACAATATTTTGCGTAAAGGCGTCCCAAAATAAACCTTCATAAATCGCCAGATATCTCTTTGCGTCAGGCCAat                                       >  1:7427528/1‑93 (MQ=255)

                                                   aaTAAATTCTGTTCAAGAGACAATATTTTGCGTAAAGGCGTCCCAAAATAAACCTTCATAAATCGCCAGATATCTCTTTGCGTCAGGCCAata                                      >  2:6217408/1‑93 (MQ=255)

                                                   aaTAAATTCTGTTCAAGAGACAATATTTTGCGTAAAGGCGTCCCAAAATAAACCTTCATAAATCGCCAGATATCTCTTTGCGTCAGGCCAata                                      <  1:7324310/93‑1 (MQ=255)

                                                    aTAAATTCTGTTCAAGAGACAATATTTTGCGTAAAGGCGTCCCAAAATAAACCTTCATAAATCGCCAGATATCTCTTTGCGTCAGGCCAatat                                     <  1:6542830/93‑1 (MQ=255)

                                                     tAAATTCTGTTCAAGAGACAATATTTTGCGTAAAGGCGTCCCAAAATAAACCTTCATAAATCGCCAGATATCTCTTTGCGTCAGGCCAATAtt                                    >  1:4743154/1‑93 (MQ=255)

                                                     tAAATTCTGTTCAAGAGACAATATTTTGCGTAAAGGCGTCCCAAAATAAACCTTCATAAATCGCCAGATATCTCTTTGCGTCAGGCCAATAtt                                    >  1:4870090/1‑93 (MQ=255)

                                                       aaTTCTGTTCAAGAGACAATATTTTGCGTAAAGGCGTCCCAAAATAAACCTTCATAAATCGCCAGATATCTCTTTGCGTCAGGCCAATATTCa                                  >  2:4355565/1‑93 (MQ=255)

                                                          tCTGTTCAAGAGACAATATTTTGCGTAAAGGCGTCCCAAAATAAACCTTCATAAATCGCCAGATATCTCTTTGCGTCAGGCCAATATTCATtg                               >  1:2783988/1‑93 (MQ=255)

                                                            tGTTCAAGAGACAATATTTTGCGTAAAGGCGTCCCAAAATAAACCTTCATAAATCGCCAGATATCTCTTTGCGTCAGGCCAATATTCATtgat                             <  1:5067654/93‑1 (MQ=255)

                                                            tGTTCAAGAGACAATATTTTGCGTAAAGGCGTCCCAAAATAAACCTTCATAAATCGCCAGATATCTCTTTGCGTCAGGCCAATATTCATtgat                             >  2:6478318/1‑93 (MQ=255)

                                                                cAAGAGACAATATTTTGCGTAAAGGCGTCCCAAAATAAACCTTCATAAATCGCCAGATATCTCTTTGCGTCAGGCCAATATTCATTGATgaga                         <  2:1910184/93‑1 (MQ=255)

                                                                 aaGAGACAATATTTTGCGTAAAGGCGTCCCAAAATAAACCTTCATAAATCGCCAGATATCTCTTTGCGTCAGGCCAATATTCATTGATGAGaa                        >  2:4893102/1‑93 (MQ=255)

                                                                 aaGAGACAATATTTTGCGTAAAGGCGTCCCAAAATAAACCTTCATAAATCGCCAGATATCTCTTTGCGTCAGGCCAATATTCATTGATGAGaa                        <  1:2854813/93‑1 (MQ=255)

                                                                 aaGAGACAATATTTTGCGTAAAGGCGTCCCAAAATAAACCTTCATAAATCGCCAGATATCTCTTTGCGTCAGGCCAATATTCATTGATGAGaa                        >  1:7137108/1‑93 (MQ=255)

                                                                 aaGAGACAATATTTTGCGTAAAGGCGTCCCAAAATAAACCTTCATAAATCGCCAGATATCTCTTTGCGTCAGGCCAATATTCATTGATGAGaa                        >  2:7710456/1‑93 (MQ=255)

                                                                  agagACAATATTTTGCGTAAAGGCGTCCCAAAATAAACCTTCATAAATCGCCAGATATCTCTTTGCGTCAGGCCAATATTCATTGATGAGaaa                       >  1:2976436/1‑93 (MQ=255)

                                                                   gagaCAATATTTTGCGTAAAGGCGTCCCAAAATAAACCTTCATAAATCGCCAGATATCTCTTTGCGTCAGGCCAATATTCATTGATGAGAAat                      >  2:2965108/1‑93 (MQ=255)

                                                                    agaCAATATTTTGCGTAAAGGCGTCCCAAAATAAACCTTCATAAATCGCCAGATATCTCTTTGCGTCAGGCCAATATTCATTGATGAGAAata                     <  2:7226445/93‑1 (MQ=255)

                                                                     gaCAATATTTTGCGTAAAGGCGTCCCAAAATAAACCTTCATAAATCGCCAGATATCTCTTTGCGTCAGGCCAATATTCATTGATGAGAAatat                    >  2:1735305/1‑93 (MQ=255)

                                                                      aCAATATTTTGCGTAAAGGCGTCCCAAAATAAACCTTCATAAATCGCCAGATATCTCTTTGCGTCAGGCCAATATTCATTGATGAGAAAtata                   >  1:3921669/1‑93 (MQ=255)

                                                                      aCAATATTTTGCGTAAAGGCGTCCCAAAATAAACCTTCATAAATCGCCAGATATCTCTTTGCGTCAGGCCAATATTCATTGATGAGAAAtata                   >  1:4890314/1‑93 (MQ=255)

                                                                        aaTATTTTGCGTAAAGGCGTCCCAAAATAAACCTTCATAAATCGCCAGATATCTCTTTGCGTCAGGCCAATATTCATTGATGAGAAATATaaa                 >  1:5843530/1‑93 (MQ=255)

                                                                        aaTATTTTGCGTAAAGGCGTCCCAAAATAAACCTTCATAAATCGCCAGATATCTCTTTGCGTCAGGCCAATATTCATTGATGAGAAATATaaa                 <  1:6298693/93‑1 (MQ=255)

                                                                        aaTATTTTGCGTAAAGGCGTCCCAAAATAAACCTTCATAAATCGCCAGATATCTCTTTGCGTCAGGCCAATATTCATTGATGAGAAATATaaa                 >  2:804405/1‑93 (MQ=255)

                                                                         atatTTTGCGTAAAGGCGTCCCAAAATAAACCTTCATAAATCGCCAGATATCTCTTTGCGTCAGGCCAATATTCATTGATGAGAAATATAAAc                <  1:5982862/93‑1 (MQ=255)

                                                                          tatTTTGCGTAAAGGCGTCCCAAAATAAACCTTCATAAATCGCCAGATATCTCTTTGCGTCAGGCCAATATTCATTGATGAGAAATATAAAca               >  1:6833459/1‑92 (MQ=255)

                                                                                gCGTAAAGGCGTCCCAAAATAAACCTTCATAAATCGCCAGATATCTCTTTGCGTCAGGCCAATATTCATTGATGAGAAATATAAACCAATCAg         >  1:4376220/1‑93 (MQ=255)

                                                                                gCGTAAAGGCGTCCCAAAATAAACCTTCATAAATCGCCAGATATCTCTTTGCGTCAGGCCAATATTCATTGATGAGAAATATAAACCAATCAg         >  1:7713356/1‑93 (MQ=255)

                                                                                  gTAAAGGCGTCCCAAAATAAACCTTCATAAATCGCCAGATATCTCTTTGCGTCAGGCCAATATTCATTGATGAGAAATATAAACCAATCAGGt       >  2:6098236/1‑93 (MQ=255)

                                                                                  gTAAAGGCGTCCCAAAATAAACCTTCATAAATCGCCAGATATCTCTTTGCGTCAGGCCAATATTCATTGATGAGAAATATAAACCAATCAGGt       >  1:3244621/1‑93 (MQ=255)

                                                                                   tAAAGGCGTCCCAAAATAAACCTTCATAAATCGCCAGATATCTCTTTGCGTCAGGCCAATATTCATTGATGAGAAATATAAACCAATCAGGTc      >  2:5582779/1‑93 (MQ=255)

                                                                                   tAAAGGCGTCCCAAAATAAACCTTCATAAATCGCCAGATATCTCTTTGCGTCAGGCCAATATTCATTGATGAGAAATATAAACCAATCAGGTc      >  1:5401720/1‑93 (MQ=255)

                                                                                   tAAAGGCGTCCCAAAATAAACCTTCATAAATCGCCAGATATCTCTTTGCGTCAGGCCAATATTCATTGATGAGAAATATAAACCAATCAGGTc      >  1:1837570/1‑93 (MQ=255)

                                                                                     aaGGCGTCCCAAAATAAACCTTCATAAATCGCCAGATATCTCTTTGCGTCAGGCCAATATTCATTGATGAGAAATATAAACCAATCAGGTCtt    >  1:458114/1‑93 (MQ=255)

TTGCGTTGTGTTCGCTCTTTAATACGCTCGGCCTTAACGCTTGCCATGTTCAATAAATTCTGTTCAAGAGACAATATTTTGCGTAAAGGCATCCCAAAATAAACCTTCATAAATCGCCAGATATCTCTTTGCGTCAGGCCAATATTCATTGATGAGAAATATAAACCAATCAGGTCTTTA  >  NC_000913/3802790‑3802969

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 25 ≤` `ATCG/ATCG` `< 31 ≤` `ATCG/ATCG` `< 35 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`

GATK/CNVnator alignment

BRESEQ :: bam2aln output

CCTTTGCGTTGTGTTCGCTCTTTAATACGCTCGGCCTTAACGCTTGCCATGTTCAATAAATTCTGTTCAAGAGACAATATTTTGCGTAAAGGCATCCCAAAATAAACCTTCATAAATCGCCAGATATCTCTTTGCGTCAGGCCAATATTCATTGATGAGAAATATAAACCAATCAGGTCTTTATCGC  >  NC_000913/3802787‑3802973

CCTTTGCGTTGTGTTCGCTCTTTAATACGCTCGGCCTTAACGCTTGCCATGTTCAATAAATTCTGTTCAAGAGACAATATTTTGCGTAAAGGCG                                                                                               <  SRR4302543.1529161/94‑1 (MQ=60)

 CTTTGCGTTGTGTTCGCTCTTTAATACGCTCGGCCTTAACGCTTGCCATGTTCAATAAATTCTGTTCAAGAGACAATATTTTGCGTAAAGGCGT                                                                                              >  SRR4302543.2436972/1‑94 (MQ=60)

 CTTTGCGTTGTGTTCGCTCTTTAATACGCTCGGCCTTAACGCTTGCCATGTTCAATAAATTCTGTTCAAGAGACAATATTTTGCGTAAAGGCGT                                                                                              <  SRR4302543.7568520/94‑1 (MQ=60)

 CTTTGCGTTGTGTTCGCTCTTTAATACGCTCGGCCTTAACGCTTGCCATGTTCAATAAATTCTGTTCAAGAGACAATATTTTGCGTAAAGGCGT                                                                                              >  SRR4302543.7355675/1‑94 (MQ=60)

 CTTTGCGTTGTGTTCGCTCTTTAATACGCTCGGCCTTAACGCTTGCCATGTTCAATAAATTCTGTTCAAGAGACAATATTTTGCGTAAAGGCGT                                                                                              >  SRR4302543.4588189/1‑94 (MQ=60)

 CTTTGCGTTGTGTTCGCTCTTTAATACGCTCGGCCTTAACGCTTGCCATGTTCAATAAATTCTGTTCAAGAGACAATATTTTGCGTAAAGGCGT                                                                                              >  SRR4302543.6261096/1‑94 (MQ=60)

  TTTGCGTTGTGTTCGCTCTTTAATACGCTCGGCCTTAACGCTTGCCATGTTCAATAAATTCTGTTCAAGAGACAATATTTTGCGTAAAGGCGTC                                                                                             >  SRR4302543.2940482/1‑94 (MQ=60)

    TGCGTTGTGTTCGCTCTTTAATACGCTCGGCCTTAACGCTTGCCATGTTCAATAAATTCTGTTCAAGAGACAATATTTTGCGTAAAGGCGTCCC                                                                                           >  SRR4302543.4820322/1‑94 (MQ=60)

      CGTTGTGTTCGCTCTTTAATACGCTCGGCCTTAACGCTTGCCATGTTCAATAAATTCTGTTCAAGAGACAATATTTTGCGTAAAGGCGTCCCAA                                                                                         >  SRR4302543.7875904/1‑94 (MQ=60)

      CGTTGTGTTCGCTCTTTAATACGCTCGGCCTTAACGCTTGCCATGTTCAATAAATTCTGTTCAAGAGACAATATTTTGCGTAAAGGCGTCCCAA                                                                                         >  SRR4302543.2084644/1‑94 (MQ=60)

      CGTTGTGTTCGCTCTTTAATACGCTCGGCCTTAACGCTTGCCATGTTCAATAAATTCTGTTCAAGAGACAATATTTTGCGTAAAGGCGTCCCAA                                                                                         >  SRR4302543.4439976/1‑94 (MQ=60)

       GTTGTGTTCGCTCTTTAATACGCTCGGCCTTAACGCTTGCCATGTTCAATAAATTCTGTTCAAGAGACAATATTTTGTGTAAAGGCGTCCCAAA                                                                                        >  SRR4302543.6381010/1‑94 (MQ=60)

       GTTGTGTTCGCTCTTTAATACGCTCGGCCTTAACGCTTGCCATGTTCAATAAATTCTGTTCAAGAGACAATATTTTGCGTAAAGGCGTCCCAAA                                                                                        >  SRR4302543.6269708/1‑94 (MQ=60)

       GTTGTGTTCGCTCTTTAATACGCTCGGCCTTAACGCTTGCCATGTTCAATAAATTCTGTTCAAGAGACAATATTTTGCGTAAAGGCGTCCCAAA                                                                                        >  SRR4302543.3084298/1‑94 (MQ=60)

       GTTGTGTTCGCTCTTTAATACGCTCGGCCTTAACGCTTGCCATGTTCAATAAATTCTGTTCAAGAGACAATATTTTGCGTAAAGGCGTCCCAAA                                                                                        >  SRR4302543.2119091/1‑94 (MQ=60)

       GTTGTGTTCGCTCTTTAATACGCTCGGCCTTAACGCTTGCCATGTTCAATAAATTCTGTTCAAGAGACAATATTTTGCGTAAAGGCGTCCCAAA                                                                                        >  SRR4302543.3332672/1‑94 (MQ=60)

       GTTGTGTTCGCTCTTTAATACGCTCGGCCTTAACGCTTGCCATGTTCAATAAATTCTGTTCAAGAGACAATATTTTGCGTAAAGGCGTCCCAAA                                                                                        >  SRR4302543.3735909/1‑94 (MQ=60)

       GTTGTGTTCGCTCTTTAATACGCTCGGCCTTAACGCTTGCCATGTTCAATAAATTCTGTTCAAGAGACAATATTTTGCGTAAAGGCGTCCCAAA                                                                                        >  SRR4302543.6895248/1‑94 (MQ=60)

       GTTGTGTTCGCTCTTTAATACGCTCGGCCTTAACGCTTGCCATGTTCAATAAATTCTGTTCAAGAGACAATATTTTGCGTAAAGGCGTCCCAAA                                                                                        >  SRR4302543.5748965/1‑94 (MQ=60)

        TTGTGTTCGCTCTTTAATACGCTCGGCCTTAACGCTTGCCATGTTCAATAAATTCTGTTCAAGAGACAATATTTTGCGTAAAGGCGTCCCAAAA                                                                                       >  SRR4302543.3328011/1‑94 (MQ=60)

         TGTGTTCGCTCTTTAATACGCTCGGCCTTAACGCTTGCCATGTTCAATAAATTCTGTTCAAGAGACAATATTTTGCGTAAAGGCGTCCCAAAAT                                                                                      >  SRR4302543.2653559/1‑94 (MQ=60)

         TGTGTTCGCTCTTTAATACGCTCGGCCTTAACGCTTGCCATGTTCAATAAATTCTGTTCAAGAGACAATATTTTGCGTAAAGGCGTCCCAAAAT                                                                                      <  SRR4302543.3579844/94‑1 (MQ=60)

         TGTGTTCGCTCTTTAATACGCTCGGCCTTAACGCTTGCCATGTTCAATAAATTCTGTTCAAGAGACAATATTTTGCGTAAAGGCGTCCCAAAAT                                                                                      >  SRR4302543.2326243/1‑94 (MQ=60)

           TGTTCGCTCTTTAATACGCTCGGCCTTAACGCTTGCCATGTTCAATAAATTCTGTTCAAGAGACAATATTTTGCGTAAAGGCGTCCCAAAATAA                                                                                    >  SRR4302543.2572743/1‑94 (MQ=60)

           TGTTCGCTCTTTAATACGCTCGGCCTTAACGCTTGCCATGTTCAATAAATTCTGTTCAAGAGACAATATTTTGCGTAAAGGCGTCCCAAAATAA                                                                                    <  SRR4302543.4271849/94‑1 (MQ=60)

           TGTTCGCTCTTTAATACGCTCGGCCTTAACGCTTGCCATGTTCAATAAATTCTGTTCAAGAGACAATATTTTGCGTAAAGGCGTCCCAAAATAA                                                                                    >  SRR4302543.1063765/1‑94 (MQ=60)

           TGTTCGCTCTTTAATACGCTCGGCCTTAACGCTTGCCATGTTCAATAAATTCTGTTCAAGAGACAATATTTTGCGTAAAGGCGTCCCAAAATAA                                                                                    >  SRR4302543.7444806/1‑94 (MQ=60)

           TGTTCGCGCTTTAATACGCTCGGCCTTAACGCTTGCCATGTTCAATAAATTCTGTTCAAGAGACAATATTTTGCGTAAAGGCGTCCCAAAATAA                                                                                    <  SRR4302543.4271850/94‑1 (MQ=60)

            GTTCGCTTTTTAATACGCTCGTCCTTAACGCTTGCCATGTTCAATAAATTCTGTTCATGAGACAATATTTTGCGTAAAGGCGTCCCAAAATAAC                                                                                   >  SRR4302543.7100007/1‑94 (MQ=60)

            GTTCGCTCTTTAATACGCTCGGCCTTAACGCTTGCCATGTTCAATAAATTCTGTTCAAGAGACAATATTTTGCGTAAAGGCGTCCCAAAATAAA                                                                                   >  SRR4302543.5003572/1‑94 (MQ=60)

               CGCTCTTTAATACGCTCGGCCTTAACGCTTGCCATGTTCAATAAATTCTGTTCAAGAGACAATATTTTGCGTAAAGGCGTCCCAAAATAAACCT                                                                                >  SRR4302543.6729669/1‑94 (MQ=60)

               CGCTCTTTAATACGCTCGGCCTTAACGCTTGCCATGTTCAATAAATTCTGTTCAAGAGACAATATTTTGCGTAAAGGCGTCCCAAAATAAACCT                                                                                >  SRR4302543.1215579/1‑94 (MQ=60)

                GCTCTTTAATACGCTCGGCCTTAACGCTTGCCATGTTCAATAAATTCTGTTCAAGAGACAATATTTTGCGTAAAGGCGTCCCAAAATAAACCTT                                                                               >  SRR4302543.6814028/1‑94 (MQ=60)

                GCTCTTTAATACGCTCGGCCTTAACGCTTGCCATGTTCAATAAATTCTGTTCAAGAGACAATATTTTGCGTAAAGGCGTCCCAAAATAAACCTT                                                                               >  SRR4302543.5298896/1‑94 (MQ=60)

                GCTCTTTAATACGCTCGGCCTTAACGCTTGCCATGTTCAATAAATTCTGTTCAAGAGACAATATTTTGCGTAAAGGCGTCCCAAAATAAACCTT                                                                               >  SRR4302543.976799/1‑94 (MQ=60)

                 CTCTTTAATACGCTCGGCCTTAACGCTTGCCATGTTCAATAAATTCTGTTCAAGAGACAATATTTTGCGTAAAGGCGTCCCAAAATAAACCTTC                                                                              <  SRR4302543.4487786/94‑1 (MQ=60)

                 CTCTTTAATACGCTCGGCCTTAACGCTTGCCATGTTCAATAAATTCTGTTCAAGAGACAATATTTTGCGTAAAGGCGTCCCAAAATAAACCTTC                                                                              >  SRR4302543.3862146/1‑94 (MQ=60)

                 CTCTTTAATACGCTCGGCCTTAACGCTTGCCATGTTCAATAAATTCTGTTCAAGAGACAATATTTTGCGTAAAGGCGTCCCAAAATAAACCTTC                                                                              >  SRR4302543.6482528/1‑94 (MQ=60)

                   CTTTAATACGCTCGGCCTTAACGCTTGCCATGTTCAATAAATTCTGTTCAAGAGACAATATTTTGCGTAAAGGCGTCCCAAAATAAACCTTCAT                                                                            >  SRR4302543.4757691/1‑94 (MQ=60)

                   CTTTAATACGCTCGGCCTTAACGCTTGCCATGTTCAATAAATTCTGTTCAAGAGACAATATTTTGCGTAAAGGCGTCCCAAAATAAACCTTCAT                                                                            >  SRR4302543.6220486/1‑94 (MQ=60)

                   CTTTAATACGCTCGGCCTTAACGCTTGCCATGTTCAATAAATTCTGTTCAAGAGACAATATTTTGCGTAAAGGCGTCCCAAAATAAACCTTCAT                                                                            >  SRR4302543.3259897/1‑94 (MQ=60)

                      TAATACGCTCTGCCTTAACGCTTGCCATGTTCAATAAATTCTGTTCAAGAGACAATATTTTGCGTAAAGGCGTCCCAAAATAAACCTTCATAAA                                                                         <  SRR4302543.3869822/94‑1 (MQ=60)

                      TAATACGCTCGGCCTTAACGCTTGCCATGTTCAATAAATTCTGTTCAAGAGACAATATTTTGCGTAAAGGCGTCCCAAAATAAACCTTCATAAA                                                                         >  SRR4302543.3871711/1‑94 (MQ=60)

                       AATACGCTCGGCCTTAACGCTTGCCATGTTCAATAAATTCTGTTCAAGAGACAATATTTTGCGTAAAGGCGTCCCAAAATAAACCTTCATAAAT                                                                        >  SRR4302543.3727421/1‑94 (MQ=60)

                        ATACGCTCGGCCTTAACGCTTGCCATGTTCAATAAATTCTGTTCAAGAGACAATATTTTGCGTAAAGGCGTCCCAAAATAAACCTTCATAAATC                                                                       >  SRR4302543.6802146/1‑94 (MQ=60)

                           CGCTCGGCCTTAACGCTTGCCATGTTCAATAAATTCTGTTCAAGAGACAATATTTTGCGTAAAGGCGTCCCAAAATAAACCTTCATAAATCGCC                                                                    >  SRR4302543.4921418/1‑94 (MQ=60)

                            GCTCGGCCTTAACGCTTGCCATGTTCAATAAATTCTGTTCAAGAGACAATATTTTGCGTAAAGGCGTCCCAAAATAAACCTTCATAAATCGCCA                                                                   >  SRR4302543.5802758/1‑94 (MQ=60)

                            GCTCGGCCTTAACGCTTGCCATGTTCAATAAATTCTGTTCAAGAGACAATATTTTGCGTAAAGGCGTCCCAAAATAAACCTTCATAAATCGCCA                                                                   >  SRR4302543.6704836/1‑94 (MQ=60)

                             CTCGGCCTTAACGCTTGCCATGTTCAATAAATTCTGTTCAAGAGACAATATTTTGCGTAAAGGCGTCCCAAAATAAACCTTCATAAATCGCCAG                                                                  >  SRR4302543.6512594/1‑94 (MQ=60)

                              TCGGCCTTAACGCTTGCCATGTTCAATAAATTCTGTTCAAGAGACAATATTTTGCGTAAAGGCGTCCCAAAATAAACCTTCATAAATCGCCAGA                                                                 >  SRR4302543.1243310/1‑94 (MQ=60)

                               CGGCCTTAACGCTTGCCATGTTCAATAAATTCTGTTCAAGAGACAATATTTTGCGTAAAGGCGTCCCAAAATAAACCTTCATAAATCGCCAGAT                                                                >  SRR4302543.5062387/1‑94 (MQ=60)

                                GGCCTTAACGCTTGCCATGTTCAATAAATTCTGTTCAAGAGACAATATTTTGCGTAAAGGCGTCCCAAAATAAACCTTCATAAATCGCCAGATA                                                               <  SRR4302543.4046276/94‑1 (MQ=60)

                                GGCCTTAACGCTTGCCATGTTCAATAAATTCTGTTCAAGAGACAATATTTTGCGTAAAGGCGTCCCAAAATAAACCTTCATAAATCGCCAGATA                                                               >  SRR4302543.6314049/1‑94 (MQ=60)

                                CGCCTTAACTCTTGCCATGTTCAATAAATTCTGGTCAAGAGACAATATTTTGCGTAAAGGCGTCCCAAAATAAACCTTCATAAATCGCCAGATA                                                               <  SRR4302543.4046275/94‑1 (MQ=60)

                                 GCCTTAACGCTTGCCATGTTCAATAAATTCTGTTCAAGAGACAATATTTTGCGTAAAGGCGTCCCAAAATAAACCTTCATAAATCGCCAGATAT                                                              >  SRR4302543.2644944/1‑94 (MQ=60)

                                  CCTTAACGCTTGCCATGTTCAATAAATTCTGTTCAAGAGACAATATTTTGCGTAAAGGCGTCCCAAAATAAACCTTCATAAATCGCCAGATATC                                                             >  SRR4302543.5064779/1‑94 (MQ=60)

                                   CTTAACGCTTGCCATGTTCAATAAATTCTGTTCAAGAGACAATATTTTGCGTAAAGGCGTCCCAAAATAAACCTTCATAAATCGCCAGATATCT                                                            >  SRR4302543.944986/1‑94 (MQ=60)

                                   CTTAACGCTTGCCATGTTCAATAAATTCTGTTCAAGAGACAATATTTTGCGTAAAGGCGTCCCAAAATAAACCTTCATAAATCGCCAGATATCT                                                            >  SRR4302543.6333671/1‑94 (MQ=60)

                                   CTTAACGCTTGCCATGTTCAATAAATTCTGTTCAAGAGACAATATTTTGCGTAAAGGCGTCCCAAAATAAACCTTCATAAATCGCCAGATATCT                                                            >  SRR4302543.2127433/1‑94 (MQ=60)

                                   CTTAACGCTTGCCATGTTCAATAAATTCTGTTCAAGAGACAATATTTTGCGTAAAGGCGTCCCAAAATAAACCTTCATAAATCGCCAGATATCT                                                            >  SRR4302543.1918993/1‑94 (MQ=60)

                                   CTTAACGCTTGCCATGTTCAATAAATTCTGTTCAAGAGACAATATTTTGCGTAAAGGCGTCCCAAAATAAACCTTCATAAATCGCCAGATATCT                                                            >  SRR4302543.4202879/1‑94 (MQ=60)

                                   CTTAACGCTTGCCATGTTCAATAAATTCTGTTCAAGAGACAATATTTTGCGTAAAGGCGTCCCAAAATAAACCTTCATAAATCGCCAGATATCT                                                            >  SRR4302543.4060111/1‑94 (MQ=60)

                                   CTTAACGCTTGCCATGTTCAATAAATTCTGTTCAAGAGACAATATTTTGCGTAAAGGCGTCCCAAAATAAACCTTCATAAATCGCCAGATATCT                                                            >  SRR4302543.355286/1‑94 (MQ=60)

                                   CTTAACGCTTGCCATGTTCAATAAATTCTGTTCAAGAGACAATATTTTGCGTAAAGGCGTCCCAAAATAAACCTTCATAAATCGCCAGATATCT                                                            >  SRR4302543.2405351/1‑94 (MQ=60)

                                   CTTAACGCTTGCCATGTTCAATAAATTCTGTTCAAGAGACAATATTTTGCGTAAAGGCGTCCCAAAATAAACCTTCATAAATCGCCAGATATCT                                                            >  SRR4302543.1031089/1‑94 (MQ=60)

                                   CTTAACGCTTGCCATGTTCAATAAATTCTGTTCAAGAGACAATATTTTGCGTAAAGGCGTCCCAAAATAAACCTTCATAAATCGCCAGATATCT                                                            >  SRR4302543.1091601/1‑94 (MQ=60)

                                    TTAACGCTTGCCATGTTCAATAAATTCTGTTCAAGAGACAATATTTTGCGTAAAGGCGTCCCAAAATAAACCTTCATAAATCGCCAGATATCTC                                                           >  SRR4302543.2862978/1‑94 (MQ=60)

                                     TAACGCTTGCCATGTTCAATAAATTCTGTTCAAGAGACAATATTTTGCGTAAAGGCGTCCCAAAATAAACCTTCATAAATCGCCAGATATCTCT                                                          >  SRR4302543.3799569/1‑94 (MQ=60)

                                     TAACGCTTGCCATGTTCAATAAATTCTGTTCAAGAGACAATATTTTGCGTAAAGGCGTCCCAAAATAAACCTTCATAAATCGCCAGATATCTCT                                                          >  SRR4302543.3972097/1‑94 (MQ=60)

                                      AACGCTTGCCATGTTCAATAAATTCTGTTCAAGAGACAATATTTTGCGTAAAGGCGTCCCAAAATAAACCTTCATAAATCGCCAGATATCTCTT                                                         <  SRR4302543.3891732/94‑1 (MQ=60)

                                        CGCTTGCCATGTTCAATAAATTCTGTTCAAGAGACAATATTTTGCGTAAAGGCGTCCCAAAATAAACCTTCATAAATCGCCAGATATCTCTTTG                                                       >  SRR4302543.3540494/1‑94 (MQ=60)

                                        CGCTTGCCATGTTCAATAAATTCTGTTCAAGAGACAATATTTTGCGTAAAGGCGTCCCAAAATAAACCTTCATAAATCGCCAGATATCTCTTTG                                                       >  SRR4302543.1657458/1‑94 (MQ=60)

                                        CGCTTGCCATGTTCAATAAATTCTGTTCAAGAGACAATATTTTGCGTAAAGGCGTCCCAAAATAAACCTTCATAAATCGCCAGATATCTCTTTG                                                       >  SRR4302543.5467346/1‑94 (MQ=60)

                                        CGCTTGCCATGTTCAATAAATTCTGTTCAAGAGACAATATTTTGCGTAAAGGCGTCCCAAAATAAACCTTCATAAATCGCCAGATATCTCTTTG                                                       >  SRR4302543.852382/1‑94 (MQ=60)

                                        CGCTTGCCATGTTCAATAAATTCTGTTCAAGAGACAATATTTTGCGTAAAGGCGTCCCAAAATAAACCTTCATAAATCGCCAGATATCTCTTTG                                                       >  SRR4302543.852379/1‑94 (MQ=60)

                                         GCTTGCCATGTTCAATAAATTCTGTTCAAGAGACAATATTTTGCGTAAAGGCGTCCCAAAATAAACCTTCATAAATCGCCAGATATCTCTTTGC                                                      >  SRR4302543.1510467/1‑94 (MQ=60)

                                         GCTTGCCATGTTCAATAAATTCTGTTCAAGAGACAATATTTTGCGTAAAGGCGTCCCAAAATAAACCTTCATAAATCGCCAGATATCTCTTTGC                                                      >  SRR4302543.107149/1‑94 (MQ=60)

                                          CTTGCCATGTTCAATAAATTCTGTTCAAGAGACAATATTTTGCGTAAAGGCGTCCCAAAATAAACCTTCATAAATCGCCAGATATCTCTTTGCG                                                     >  SRR4302543.1804299/1‑94 (MQ=60)

                                          CTTGCCATGTTCAATAAATTCTGTTCAAGAGACAATATTTTGCGTAAAGGCGTCCCAAAATAAACCTTCATAAATCGCCAGATATCTCTTTGCG                                                     <  SRR4302543.7868709/94‑1 (MQ=60)

                                           TTGCCATGTTCAATAAATTCTGTTCAAGAGACAATATTTTGCGTAAAGGCGTCCCAAAATAAACCTTCATAAATCGCCAGATATCTCTTTGCGT                                                    >  SRR4302543.5237599/1‑94 (MQ=60)

                                            TGCCATGTTCAATAAATTCTGTTCAAGAGACAATATTTTGCGTAAAGGCGTCCCAAAATAAACCTTCATAAATCGCCAGATATCTCTTTGCGTC                                                   >  SRR4302543.3744087/1‑94 (MQ=60)

                                            TGCCATGTTCAATAAATTCTGTTCAAGAGACAATATTTTGCGTAAAGGCGTCCCAAAATAAACCTTCATAAATCGCCAGATATCTCTTTGCGTC                                                   >  SRR4302543.3278944/1‑94 (MQ=60)

                                             GCCATGTTCAATAAATTCTGTTCAAGAGACAATATTTTGCGTAAAGGCGTCCCAAAATAAACCTTCATAAATCGCCAGATATCTCTTTGCGTCA                                                  >  SRR4302543.4105014/1‑94 (MQ=60)

                                              CCATGTTCAATAAATTCTGTTCAAGAGACAATATTTTGCGTAAAGGCGTCCCAAAATAAACCTTCATAAATCGCCAGATATCTCTTTGCGTCAG                                                 >  SRR4302543.1458217/1‑94 (MQ=60)

                                              CCATGTTCAATAAATTCTGTTCAAGAGACAATATTTTGCGTAAAGGCGTCCCAAAATAAACCTTCATAAATCGCCAGATATCTCTTTGCGTCAG                                                 >  SRR4302543.4270898/1‑94 (MQ=60)

                                              CCATGTTCAATAAATTCTGTTCAAGAGACAATATTTTGCGTAAAGGCGTCCCAAAATAAACCTTCATAAATCGCCAGATATCTCTTTGCGTCAG                                                 >  SRR4302543.3190709/1‑94 (MQ=60)

                                               CATGTTCAATAAATTCTGTTCAAGAGACAATATTTTGCGTAAAGGCGTCCCAAAATAAACCTTCATAAATCGCCAGATATCTCTTTGCGTCAGG                                                >  SRR4302543.2009628/1‑94 (MQ=60)

                                               CATGTTCAATAAATTCTGTTCAAGAGACAATATTTTGCGTAAAGGCGTCCCAAAATAAACCTTCATAAATCGCCAGATATCTCTTTGCGTCAGG                                                >  SRR4302543.7486719/1‑94 (MQ=60)

                                               CATGTTCAATAAATTCTGTTCAAGAGACAATATTTTGCGTAAAGGCGTCCCAAAATAAACCTTCATAAATCGCCAGATATCTCTTTGCGTCAGG                                                >  SRR4302543.4044038/1‑94 (MQ=60)

                                                ATGTTCAATAAATTCTGTTCAAGAGACAATATTTTGCGTAAAGGCGTCCCAAAATAAACCTTCATAAATCGCCTGATATCTCTTTGCGTCAGGC                                               >  SRR4302543.5848439/1‑94 (MQ=60)

                                                ATGTTCAATAAATTCTGTTCAAGAGACAATATTTTGCGTAAAGGCGTCCCAAAATAAACCTTCATAAATCGCCAGATATCTCTTTGCGTCAGGC                                               >  SRR4302543.1992880/1‑94 (MQ=60)

                                                ATGTTCAATAAATTCTGTTCAAGAGACAATATTTTGCGTAAAGGCGTCCCAAAATAAACCTTCATAAATCGCCAGATATCTCTTTGCGTCAGGC                                               >  SRR4302543.7152341/1‑94 (MQ=60)

                                                 TGTTCAATAAATTCTGTTCAAGAGACAATATTTTGCGTAAAGGCGTCCCAAAATAAACCTTCATAAATCGCCAGATATCTCTTTGCGTCAGGCC                                              >  SRR4302543.2576958/1‑94 (MQ=60)

                                                 TGTTCAATAAATTCTGTTCAAGAGACAATATTTTGCGTAAAGGCGTCCCAAAATAAACCTTCATAAATCGCCAGATATCTCTTTGCGTCAGGCC                                              >  SRR4302543.1867581/1‑94 (MQ=60)

                                                  GTTCAATAAATTCTGTTCAAGAGACAATATTTTGCGTAAAGGCGTCCCAAAATAAACCTTCATAAATCGCCAGATATCTCTTTGCGTCAGGCCA                                             >  SRR4302543.7206552/1‑94 (MQ=60)

                                                  GTTCAATAAATTCTGTTCAAGAGACAATATTTTGCGTAAAGGCGTCCCAAAATAAACCTTCATAAATCGCCAGATATCTCTTTGCGTCAGGCCA                                             >  SRR4302543.5979045/1‑94 (MQ=60)

                                                  GTTCAATAAATTCTGTTCAAGAGACAATATTTTGCGTAAAGGCGTCCCAAAATAAACCTTCATAAATCGCCAGATATCTCTTTGCGTCAGGCCA                                             >  SRR4302543.5651015/1‑94 (MQ=60)

                                                   TTCAATAAATTCTGTTCAAGAGACAATATTTTGCGTAAAGGCGTCCCAAAATAAACCTTCATAAATCGCCAGATATCTCTTTGCGTCAGGCCAA                                            >  SRR4302543.123372/1‑94 (MQ=60)

                                                   TTCAATAAATTCTGTTCAAGAGACAATATTTTGCGTAAAGGCGTCCCAAAATAAACCTTCATAAATCGCCAGATATCTCTTTGCGTCAGGCCAA                                            >  SRR4302543.3156647/1‑94 (MQ=60)

                                                   TTCAATAAATTCTGTTCAAGAGACAATATTTTGCGTAAAGGCGTCCCAAAATAAACCTTCATAAATCGCCAGATATCTCTTTGCGTCAGGCCAA                                            >  SRR4302543.4149478/1‑94 (MQ=60)

                                                    TCAATAAATTCTGTTCAAGAGACAATATTTTGCGTAAAGGCGTCCCAAAATAAACCTTCATAAATCGCCAGATATCTCTTTGCGTCAGGCCAAT                                           <  SRR4302543.7802835/94‑1 (MQ=60)

                                                    TCAATAAATTCTGTTCAAGAGACAATATTTTGCGTAAAGGCGTCCCAAAATAAACCTTCATAAATCGCCAGATATCTCTTTGCGTCAGGCCAAT                                           >  SRR4302543.7498746/1‑94 (MQ=60)

                                                    TCAATAAATTCTGTTCAAGAGACAATATTTTGCGTAAAGGCGTCCCAAAATAAACCTTCATAAATCGCCAGATATCTCTTTGCGTCAGGCCAAT                                           <  SRR4302543.5477040/94‑1 (MQ=60)

                                                      AATAAATTCTGTTCAAGAGACAATATTTTGCGTAAAGGCGTCCCAAAATAAACCTTCATAAATCGCCAGATATCTCTTTGCGTCAGGCCAATAT                                         >  SRR4302543.2015067/1‑94 (MQ=60)

                                                      AATAAATTCTGTTCAAGAGACAATATTTTGCGTAAAGGCGTCCCAAAATAAACCTTCATAAATCGCCAGATATCTCTTTGCGTCAGGCCAATAT                                         >  SRR4302543.2432969/1‑94 (MQ=60)

                                                      AATAAATTCTGTTCAAGAGACAATATTTTGCGTAAAGGCGTCCCAAAATAAACCTTCATAAATCGCCAGATATCTCTTTGCGTCAGGCCAATAT                                         <  SRR4302543.7394839/94‑1 (MQ=60)

                                                      AATAAATTCTGTTCAAGAGACAATATTTTGCGTAAAGGCGTCCCAAAATAAACCTTCATAAATCGCCAGATATCTCTTTGCGTCAGGCCAATAT                                         >  SRR4302543.7016982/1‑94 (MQ=60)

                                                      AATAAATTCTGTTCAAGAGACAATATTTTGCGTAAAGGCGTCCCAAAATAAACCTTCATAAATCGCCAGATATCTCTTTGCGTCAGGCCAATAT                                         >  SRR4302543.4583490/1‑94 (MQ=60)

                                                       ATAAATTCTGTTCAAGAGACAATATTTTGCGTAAAGGCGTCCCAAAATAAACCTTCATAAATCGCCAGATATCTCTTTGCGTCAGGCCAATATT                                        >  SRR4302543.4914484/1‑94 (MQ=60)

                                                       ATAAATTCTGTTCAAGAGACAATATTTTGCGTAAAGGCGTCCCAAAATAAACCTTCATAAATCGCCAGATATCTCTTTGCGTCAGGCCAATATT                                        <  SRR4302543.6604410/94‑1 (MQ=60)

                                                       ATAAATTCTGTTCAAGAGACAATATTTTGCGTAAAGGCGTCCCAAAATAAACCTTCATAAATCGCCAGATATCTCTTTGCGTCAGGCCAATATT                                        >  SRR4302543.4786496/1‑94 (MQ=60)

                                                       ATAAATTCTGTTCAAGAGACAATATTTTGCGTAAAGGCGTCCCAAAATAAACCTTCATAAATCGCCAGATATCTCTTTGCGTCAGGCCAATATT                                        >  SRR4302543.4786497/1‑94 (MQ=60)

                                                          AATTCTGTTCAAGAGACAATATTTTGCGTAAAGGCGTCCCAAAATAAACCTTCATAAATCGCCAGATATCTCTTTGCGTCAGGCCAATATTCAT                                     <  SRR4302543.4474090/94‑1 (MQ=60)

                                                           ATTCTGTTCAAGAGACAATATTTTGCGTAAAGGCGTCCCAAAATAAACCTTCATAAATCGCCAGATATCTCTTTGCGTCAGGCCAATATTCATT                                    >  SRR4302543.1326965/1‑94 (MQ=60)

                                                           ATTCTGTTCAAGAGACAATATTTTGCGTAAAGGCGTCCCAAAATAAACCTTCATAAATCGCCAGATATCTCTTTGCGTCAGGCCAATATTCATT                                    >  SRR4302543.409016/1‑94 (MQ=60)

                                                           ATTCTGTTCAAGAGACAATATTTTGCGTAAAGGCGTCCCAAAATAAACCTTCATAAATCGACAGATATCTCTTTGCGTCAGGCCAATATTCATT                                    >  SRR4302543.5547882/1‑94 (MQ=60)

                                                            TTCTGTTCAAGAGACAATATTTTGCGTAAAGGCGTCCCAAAATAAACCTTCATAAATCGCCAGATATCTCTTTGCGTCAGGCCAATATTCATTG                                   >  SRR4302543.2809381/1‑94 (MQ=60)

                                                              CTGTTCAAGAGACAATATTTTGCGTAAAGGCGTCCCAAAATAAACCTTCATAAATCGCCAGATATCTCTTTGCGTCAGGCCAATATTCATTGAT                                 >  SRR4302543.1682254/1‑94 (MQ=60)

                                                              CTGTTCAAGAGACAATATTTTGCGTAAAGGCGTCCCAAAATAAACCTTCATAAATCGCCAGATATCTCTTTGCGTCAGGCCAATATTCATTGAT                                 >  SRR4302543.4326187/1‑94 (MQ=60)

                                                               TGTTCAAGAGACAATATTTTGCGTAAAGGCGTCCCAAAATAAACCTTCATAAATCGCCAGATATCTCTTTGCGTCAGGCCAATATTCATTGATG                                <  SRR4302543.5113657/94‑1 (MQ=60)

                                                                 TTCAAGAGACAATATTTTGCGTAAAGGCGTCCCAAAATAAACCTTCATAAATCGCCAGATATCTCTTTGCGTCAGGCCAATATTCATTGATGAG                              <  SRR4302543.4931694/94‑1 (MQ=60)

                                                                   CAAGAGACAATATTTTGCGTAAAGGCGTCCCAAAATAAACCTTCATAAATCGCCAGATATCTCTTTGCGTCAGGCCAATATTCATTGATGAGAA                            >  SRR4302543.2416624/1‑94 (MQ=60)

                                                                   CAAGAGACAATATTTTGCGTAAAGGCGTCCCAAAATAAACCTTCATAAATCGCCAGATATCTCTTTGCGTCAGGCCAATATTCATTGATGAGAA                            >  SRR4302543.4053333/1‑94 (MQ=60)

                                                                   CAAGAGACAATATTTTGCGTAAAGGCGTCCCAAAATAAACCTTCATAAATCGCCAGATATCTCTTTGCGTCAGGCCAATATTCATTGATGAGAA                            >  SRR4302543.3201091/1‑94 (MQ=60)

                                                                   CAAGAGACAATATTTTGCGTAAAGGCGTCCCAAAATAAACCTTCATAAATCGCCAGATATCTCTTTGCGTCAGGCCAATATTCATTGATGAGAA                            >  SRR4302543.7206459/1‑94 (MQ=60)

                                                                   CAAGAGACAATATTTTGCGTAAAGGCGTCCCAAAATAAACCTTCATAAATCGCCAGATATCTCTTTGCGTCAGGCCAATATTCATTGATGAGAA                            >  SRR4302543.7206460/1‑94 (MQ=60)

                                                                    AAGAGACAATATTTTGCGTAAAGGCGTCCCAAAATAAACCTTCATAAATCGCCAGATATCTCTTTGCGTCAGGCCAATATTCATTGATGAGAAA                           >  SRR4302543.7231135/1‑94 (MQ=60)

                                                                    AAGAGACAATATTTTGCGTAAAGGCGTCCCAAAATAAACCTTCATAAATCGCCAGATATCTCTTTGCGTCAGGCCAATATTCATTGATGAGAAA                           >  SRR4302543.1969290/1‑94 (MQ=60)

                                                                    AAGAGACAATATTTTGCGTAAAGGCGTCCCAAAATAAACCTTCATAAATCGCCAGATATCTCTTTGCGTCAGGCCAATATTCATTGATGAGAAA                           >  SRR4302543.3003467/1‑94 (MQ=60)

                                                                    AAGAGACAATATTTTGCGTAAAGGCGTCCCAAAATAAACCTTCATAAATCGCCAGATATCTCTTTGCGTCAGGCCAATATTCATTGATGAGAAA                           >  SRR4302543.3003238/1‑94 (MQ=60)

                                                                    AAGAGACAATATTTTGCGTAAAGGCGTCCCAAAATAAACCTTCATAAATCGCCAGATATCTCTTTGCGTCAGGCCAATATTCATTGATGAGAAA                           <  SRR4302543.2880858/94‑1 (MQ=60)

                                                                     AGAGACAATATTTTGCGTAAAGGCGTCCCAAAATAAACCTTCATAAATCGCCAGATATCTCTTTGCGTCAGGCCAATATTCATTGATGAGAAAT                          >  SRR4302543.269465/1‑94 (MQ=60)

                                                                     AGAGACAATATTTTGCGTAAAGGCGTCCCAAAATAAACCTTCATAAATCGCCAGATATCTCTTTGCGTCAGGCCAATATTCATTGATGAGAAAT                          >  SRR4302543.1500084/1‑94 (MQ=60)

                                                                      GAGACAATATTTTGCGTAAAGGCGTCCCAAAATAAACCTTCATAAATCGCCAGATATCTCTTTGCGTCAGGCCAATATTCATTGATGAGAAATA                         >  SRR4302543.1223947/1‑94 (MQ=60)

                                                                       AGACAATATTTTGCGTAAAGGCGTCCCAAAATAAACCTTCATAAATCGCCAGATATCTCTTTGCGTCAGGCCAATATTCATTGATGAGAAATAT                        >  SRR4302543.6024097/1‑94 (MQ=60)

                                                                       AGACAATATTTTGCGTAAAGGCGTCCCAAAATAAACCTTCATAAATCGCCAGATATCTCTTTGCGTCAGGCCAATATTCATTGATGAGAAATAT                        >  SRR4302543.6432569/1‑94 (MQ=60)

                                                                        GACAATATTTTGCGTAAAGGCGTCCCAAAATAAACCTTCATAAATCGCCAGATATCTCTTTGCGTCAGGCCAATATTCATTGATGAGAAATATA                       >  SRR4302543.3956278/1‑94 (MQ=60)

                                                                        GACAATATTTTGCGTAAAGGCGTCCCAAAATAAACCTTCATAAATCGCCAGATATCTCTTTGCGTCAGGCCAATATTCATTGATGAGAAATATA                       >  SRR4302543.4934893/1‑94 (MQ=60)

                                                                         ACAATATTTTGCGTAAAGGCGTCCCAAAATAAACCTTCATAAATCGCCAGATATCTCTTTGCGTCAGGCCAATATTCATTGATGAGAAATATAA                      >  SRR4302543.187758/1‑94 (MQ=60)

                                                                          CAATATTTTGCGTAAAGGCGTCCCAAAATAAACCTTCATAAATCGCCAGATATCTCTTTGCGTCAGGCCAATATTCATTGATGAGAAATATAAA                     >  SRR4302543.5896692/1‑94 (MQ=60)

                                                                          CAATATTTTGCGTAAAGGCGTCCCAAAATAAACCTTCATAAATCGCCAGATATCTCTTTGCGTCAGGCCAATATTCATTGATGAGAAATATAAA                     >  SRR4302543.4837734/1‑94 (MQ=60)

                                                                           AATATTTTGCGTAAAGGCGTCCCAAAATAAACCTTCATAAATCGCCAGATATCTCTTTGCGTCAGGCCAATATTCATTGATGAGAAATATAAAC                    <  SRR4302543.6357970/94‑1 (MQ=60)

                                                                           AATATTTTGCGTAAAGGCGTCCCAAAATAAACCTTCATAAATCGCCAGATATCTCTTTGCGTCAGGCCAATATTCATTGATGAGAAATATAAAC                    <  SRR4302543.7745173/94‑1 (MQ=60)

                                                                           AATATTTTGCGTAAAGGCGTCCCAAAATAAACCTTCATAAACCGCCAGATATCTCTTTGCGTCAGGCCAATATTCATTGATGAGAAATATAAAC                    <  SRR4302543.7745174/94‑1 (MQ=60)

                                                                            ATATTTTGCGTAAAGGCGTCCCAAAATAAACCTTCATAAATCGCCAGATATCTCTTTGCGTCAGGCCAATATTCATTGATGAGAAATATAAACC                   >  SRR4302543.2814055/1‑94 (MQ=60)

                                                                            ATATTTTGCGTAAAGGCGTCCCAAAATAAACCTTCATAAATCGCCAGATATCTCTTTGCGTCAGGCCAATATTCATTGATGAGAAATATAAACC                   <  SRR4302543.6037686/94‑1 (MQ=60)

                                                                            ATATTTTGCGTAAAGGCGTCCCAAAATAAACCTTCATAAATCGCCAGATATCTCTTTGCGTCAGGCCAATATTCATTGATGAGAAATATAAACA                   >  SRR4302543.6897971/1‑94 (MQ=60)

                                                                               TTTTGCGTAAAGGCGTCCCAAAATAAACCTTCATAAATCGCCAGATATCTCTTTGCGTCAGGCCAATATTCATTGATGAGAAATATAAACCAAC                >  SRR4302543.4963420/1‑94 (MQ=60)

                                                                                TTTGCGTAAAGGCGTCCCACAATAGACCTTCATAAATCGCCAGATATCTCTTTGCGTCAGACCAATATTCATTGACGAGAAATATAAACCAATC               <  SRR4302543.7114006/94‑1 (MQ=60)

                                                                                TTTGCGTAAAGGCGTCCCAAAATAAACCTTCATAAATCGCCAGATATCTCTTTGCGTCAGGCCAATATTCATTGATGAGAAATATAAACCAATC               <  SRR4302543.3905090/94‑1 (MQ=60)

                                                                                 TTGCGTAAAGGCGTCCCAAAATAAACCTTCATAAATCGCCAGATATCTCTTTGCGTCAGGCCAATATTCATTGATGAGAAATATAAACCAATCA              >  SRR4302543.113178/1‑94 (MQ=60)

                                                                                  TGCGTAAAGGCGTCCCAAAATAAACCTTCATAAATCGCCAGATATCTCTTTGCGTCAGGCCAATATTCATTGATGAGAAATATAAACCAATCAG             >  SRR4302543.4415871/1‑94 (MQ=60)

                                                                                  TGCGTAAAGGCGTCCCAAAATAAACCTTCATAAATCGCCAGATATCTCTTTGCGTCAGGCCAATATTCATTGATGAGAAATATAAACCAATCAG             >  SRR4302543.7786313/1‑94 (MQ=60)

                                                                                  TGCGTAAAGGCGTCCCAAAATAAACCTTCATAAATCGCCAGATATCTCTTTGCGTCAGGCCAATATTCATTGATGAGAAATATAAACCAATCAG             >  SRR4302543.2808702/1‑94 (MQ=60)

                                                                                   GCGTAAAGGCGTCCCAAAATAAACCTTCATAAATCGCCAGATATCTCTTTGCGTCAGGCCAATATTCATTGATGAGAAATATAAACCAATCAGG            <  SRR4302543.6904844/94‑1 (MQ=60)

                                                                                   GCGTAAAGGCGTCCCAAAATAAACCTTCATAAATCGCCAGATATCTCTTTGCGTCAGGCCAATATTCATTGATGAGAAATATAAACCAATCAGG            <  SRR4302543.3790084/94‑1 (MQ=60)

                                                                                    CGTAAAGGCGTCCCAAAATAAACCTTCATAAATCGCCAGATATCTCTTTGCGTCAGGCCAATATTCATTGATGAGAAATATAAACCAATCAGGT           <  SRR4302543.353314/94‑1 (MQ=60)

                                                                                    CGTAAAGGCGTCCCAAAATAAACCTTCATAAATCGCCAGATATCTCTTTGCGTCAGGCCAATATTCATTGATGAGAAATATAAACCAATCAGGT           >  SRR4302543.5115815/1‑94 (MQ=60)

                                                                                    CGTAAAGGCGTCCCAAAATAAACCTTCATAAATCGCCAGATATCTCTTTGCGTCAGGCCAATATTCATTGATGAGAAATATAAACCAATCAGGT           >  SRR4302543.3273963/1‑94 (MQ=60)

                                                                                     GTAAAGGCGTCCCAAAATAAACCTTCATAAATCGCCAGATATCTCTTTGCGTCAGGCCAATATTCATTGATGAGAAATATAAACCAATCAGGTC          >  SRR4302543.1854099/1‑94 (MQ=60)

                                                                                     GTAAAGGCGTCCCAAAATAAACCTTCATAAATCGCCAGATATCTCTTTGCGTCAGGCCAATATTCATTGATGAGAAATATAAACCAATCAGGTC          >  SRR4302543.5018613/1‑94 (MQ=60)

                                                                                     GTAAAGGCGTCCCAAAATAAACCTTCATAAATCGCCAGATATCTCTTTGCGTCAGGCCAATATTCATTGATGAGAAATATAAACCAATCAGGTC          >  SRR4302543.1385991/1‑94 (MQ=60)

                                                                                     GTAAAGGCGTCCCAAAATAAACCTTCATAAATCGCCAGATATCTCTTTGCGTCAGGCCAATATTCATTGATGAGAAATATAAACCAATCAGGTC          >  SRR4302543.5450833/1‑94 (MQ=60)

                                                                                     GTAAAGGCGTCCCAAAATAAACCTTCATAAATCGCCAGATATCTCTTTGCGTCAGGCCAATATTCATTGATGAGAAATATAAACCAATCAGGTC          <  SRR4302543.451723/94‑1 (MQ=60)

                                                                                     GTAAAGGCGTCCCAAAATAAACCTTCATAAATCGCCAGATATCTCTTTGCGTCAGGCCAATATTCATTGATGAGAAATATAAACCAATCAGGTC          >  SRR4302543.5450834/1‑94 (MQ=60)

                                                                                     GTAAAGGCGTCCCAAAATAAACCTTCATAAATCGCCAGATATCTCTTTGCGTCAGGCCAATATTCATTGATGAGAAATATAAACCAATCAGGTC          >  SRR4302543.623255/1‑94 (MQ=60)

                                                                                      TAAAGGCGTCCCAAAATAAACCTTCATAAATCGCCAGATATCTCTTTGCGTCAGGCCAATATTCATTGATGAGAAATATAAACCAATCAGGTCT         >  SRR4302543.1040792/1‑94 (MQ=60)

                                                                                       AAAGGCGTCCCAAAATAAACCTTCATAAATCGCCAGATATCTCTTTGCGTCAGGCCAATATTCATTGATGAGAAATATAAACCAATCAGGTCTT        >  SRR4302543.507923/1‑94 (MQ=60)

                                                                                       AAAGGCGTCCCAAAATAAACCTTCATAAATCGCCAGATATCTCTTTGCGTCAGGCCAATATTCATTGATGAGAAATATAAACCAATCAGGTCTT        <  SRR4302543.5306822/94‑1 (MQ=60)

                                                                                       AAAGGCGTCCCAAAATAAACCTTCATAAATCGCCAGATATCTCTTTGCGTCAGGCCAATATTCATTGATGAGAAATATAAACCAATCAGGTCTT        >  SRR4302543.462369/1‑94 (MQ=60)

                                                                                        AAGGCGTCCCAAAATAAACCTTCATAAATCGCCAGATATCTCTTTGCGTCAGGCCAATATTCATTGATGAGAAATATAAACCAATCAGGTCTTT       >  SRR4302543.5441083/1‑94 (MQ=60)

                                                                                         AGGCGTCCCAAAATAAACCTTCATAAATCGCCAGATATCTCTTTGCGTCAGGCCAATATTCATTGATGAGAAATATAAACCAATCAGGTCTTTA      <  SRR4302543.6516653/94‑1 (MQ=60)

                                                                                         AGGCGTCCCAAAATAAACCTTCATAAATCGCCAGATATCTCTTTGCGTCAGGCCAATATTCATTGATGAGAAATATAAACCAATCAGGTCTTTA      >  SRR4302543.3096461/1‑94 (MQ=60)

                                                                                          GGCGTCCCAAAATAAACCTTCATAAATCGCCAGATATCTCTTTGCGTCAGGCCAATATTCATTGATGAGAAATATAAACCAATCAGGTCTTTAT     >  SRR4302543.7681399/1‑94 (MQ=60)

                                                                                          GGCGTCCCAAAATAAACCTTCATAAATCGCCAGATATCTCTTTGCGTCAGGCCAATATTCATTGATGAGAAATATAAACCAATCAGGTCTTTAT     >  SRR4302543.261843/1‑94 (MQ=60)

                                                                                          GGCGTCCCAAAATAAACCTTCATAAATCGCCAGATATCTCTTTGCGTCAGGCCAATATTCATTGATGAGAAATATAAACCAATCAGGTCTTTAT     >  SRR4302543.261842/1‑94 (MQ=60)

                                                                                            CGTCCCAAAATAAACCTTCATAAATCGCCAGATATCTCTTTGCGTCAGGCCAATATTCATTGATGAGAAATATAAACCAATCAGGTCTTTATCG   >  SRR4302543.7224972/1‑94 (MQ=60)

                                                                                             GTCCCAAAATAAACCTTCATAAATCGCCAGATATCTCTTTGCGTCAGGCCAATATTCATTGATGAGAAATATAAACCAATCAGGTCTTTATCGC  <  SRR4302543.5901195/94‑1 (MQ=60)

                                                                                             GTCCCAAAATAAACCTTCATAAATCGCCAGATATCTCTTTGCGTCAGGCCAATATTCATTGATGAGAAATATAAACCAATCAGGTCTTTATCGC  >  SRR4302543.7893210/1‑94 (MQ=60)

                                                                                             GTCCCAAAATAAACCTTCATAAATCGCCAGATATCTCTTTGCGTCAGGCCAATATTCATTGATAAGAAATATAAACCAATCAGGTCTTTATCGC  >  SRR4302543.7893215/1‑94 (MQ=60)

CCTTTGCGTTGTGTTCGCTCTTTAATACGCTCGGCCTTAACGCTTGCCATGTTCAATAAATTCTGTTCAAGAGACAATATTTTGCGTAAAGGCATCCCAAAATAAACCTTCATAAATCGCCAGATATCTCTTTGCGTCAGGCCAATATTCATTGATGAGAAATATAAACCAATCAGGTCTTTATCGC  >  NC_000913/3802787‑3802973

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 0 ≤` `ATCG/ATCG` `< 25 ≤` `ATCG/ATCG` `< 31 ≤` `ATCG/ATCG` `< 35 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`