Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A1 F1 I1 R1 1696 279.3 15874187 97.8% 15524954 93.0

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 3,828,674 T→C T197T (ACT→ACC yicH → hypothetical protein

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009133,828,6740TC99.3% 1383.1 / ‑2.4 436T197T (ACT→ACCyicHhypothetical protein
Reads supporting (aligned to +/- strand):  ref base T (2/1);  new base C (257/176);  total (259/177)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.53e-01

Only 100 of 450 total aligned reads displayed.

GTTTAGTGCCGGATCGCTTTCGCTCAATGATGTTCCTGCCACCAATGTACTGATTGAAGGCAGTATTGATAACGATCGCGTTACGCTGACTAACCTGGGTGCCGACATCGCCCGCGGGACATTAACCGGAAACGCGCAGCGTAACGCCGACGGCAGCTGGCAAGTGGAAAACCTGCGCAT  >  NC_000913/3828584‑3828763
                                                                                          |                                                                                         
gTTTAGTGCCGGATCGCTTTCGCTCAATGATGTTCCTGCCACCAATGTACTGATTGAAGGCAGTATTGATAACGATCGCGTTACGCTGACCaa                                                                                         >  2:1467535/1‑93 (MQ=255)
gTTTAGTGCCGGATCGCTTTCGCTCAATGATGTTCCTGCCACCAATGTACTGATTGAAGGCAGTATTGATAACGATCGCGTTACGCTGACCaa                                                                                         >  2:413544/1‑93 (MQ=255)
 tttAGTGCCGGATCGCTTTCGCTCAATGATGTTCCTGCCACCAATGTACTGATTGAAGGCAGTATTGATAACGATCGCGTTACGCTGACCAAc                                                                                        <  2:6346405/93‑1 (MQ=255)
   tAGTGCCGGATCGCTTTCGCTCAATGATGTTCCTGCCACCAATGTACTGATTGAAGGCAGTATTGATAAAGATCGCGTTACGCTGACCAACCt                                                                                      >  1:6376614/1‑93 (MQ=255)
    aGTGCCGGATCGCTTTCGCTCAATGATGTTCCTGCCACCAATGTACTGATTGAAGGCAGTATTGATAACGATCGCGTTACGCTGACCAACCTg                                                                                     <  1:952024/93‑1 (MQ=255)
      tGCCGGATCGCTTTCGCTCAATGATGTTCCTGCCACCAATGTACTGATTGAAGGCAGTATTGATAACGATCGCGTTACGCTGACCAACCTggg                                                                                   <  1:2935668/93‑1 (MQ=255)
         cGGATCGCTTTCGCTCAATGATGTTCCTGCCACCAATGTACTGATTGAAGGCAGTATTGATAACGATCGCGTTACGCTGACCACCCTGGGTGc                                                                                >  1:2171936/1‑93 (MQ=255)
         cGGATCGCTTTCGCTCAATGATGTTCCTGCCACCAATGTACTGATTGAAGGCAGTATTGATAACGATCGCGTTACGCTGACCAACCTGGGTGc                                                                                <  1:5128904/93‑1 (MQ=255)
          ggATCGCTTTCGCTCAATGATGTTCCTGCCACCAATGTACTGATTGAAGGCAGTATTGATAACGATCGCGTTACGCTGACCAACCTGGGTGcc                                                                               >  1:1833273/1‑93 (MQ=255)
          ggATCGCTTTCGCTCAATGATGTTCCTGCCACCAATGTACTGATTGAAGGCAGTATTGATAACGATCGCGTTACGCTGACCAACCTGGGTGcc                                                                               >  1:7285108/1‑93 (MQ=255)
          ggATCGCTTTCGCTCAATGATGTTCCTGCCACCAATGTACTGATTGAAGGCAGTATTGATAACGATCGCGTTACGCTGACCAACCTGGGTGcc                                                                               >  2:1586408/1‑93 (MQ=255)
          ggATCGCTTTCGCTCAATGATGTTCCTGCCACCAATGTACTGATTGAAGGCAGTATTGATAACGATCGCGTTACGCTGACCAACCTGGGTGcc                                                                               >  2:4551096/1‑93 (MQ=255)
           gATCGCTTTCGCTCAATGATGTTCCTGCCACCAATGTACTGATTGAAGGCAGTATTGATAACGATCGCGTTACGCTGACCAACCTGGGTGCCg                                                                              >  2:2632762/1‑93 (MQ=255)
           gATCGCTTTCGCTCAATGATGTTCCTGCCACCAATGTACTGATTGAAGGCAGTATTGATAACCATCGCGTTACGCTGACCAACCTGGGTGCCg                                                                              >  2:2127103/1‑93 (MQ=255)
            aTCGCTTTCGCTCAATGATGTTCCTGCCACCAATGTACTGATTGAAGGCAGTATTGATAACGATCGCGTTACGCTGACCAACCTGGGTGCCGa                                                                             >  1:5918844/1‑93 (MQ=255)
            aTCGCTTTCGCTCAATGATGTTCCTGCCACCAATGTACTGATTGAAGGCAGTATTGATAACGATCGCGTTACGCTGACCAACCTGGGTGCCGa                                                                             <  2:5738658/93‑1 (MQ=255)
             tCGCTTTCGCTCAATGATGTTCCTGCCACCAATGTACTGATTGAAGGCAGTATTGATAACGATCGCGTTACGCTGACCAACCTGGGTGCCGAc                                                                            >  1:1671294/1‑93 (MQ=255)
             tCGCTTTCGCTCAATGATGTTCCTGCCACCAATGTACTGATTGAAGGCAGTATTGATAACGATCGCGTTACGCTGACCAACCTGGGTGCCGAc                                                                            >  1:4479147/1‑93 (MQ=255)
                cTTTCGCTCAATGATGTTCCTGCCACCAATGTACTGATTGAAGGCAGTATTGATAACGATCGCGTTACGCTGACCAACCTGGGTGCCGACATc                                                                         <  1:5477158/93‑1 (MQ=255)
                   tCGCTCAATGATGTTCCTGCCACCAATGTACTGATTGAAGGCAGTATTGATAACGATCGCGTTACGCTGACCAACCTGGGTGCCGACATCGcc                                                                      <  2:3185755/93‑1 (MQ=255)
                      cTCAATGATGTTCCTGCCACCAATGTACTGATTGAAGGCAGTATTGATAACGATCGCGTTACGCTGACTAACCTGGGTGCCGACATCGCCcgc                                                                   <  1:6124600/93‑1 (MQ=255)
                       tCAATGATGTTCCTGCCACCAATGTACTGATTGAAGGCAGTATTGATAACGATCGCGTTACGCTGACCAACCTGGGTGCCGACATCGCCcgcg                                                                  >  1:4569183/1‑93 (MQ=255)
                       tCAATGATGTTCCTGCCACCAATGTACTGATTGAAGGCAGTATTGATAACGATCGCGTTACGCTGACCAACCTGGGTGCCGACATCGCCcgcg                                                                  >  2:3890010/1‑93 (MQ=255)
                         aaTGATGTTCCTGCCACCAATGTACTGATTGAAGGCAGTATTGATAACGATCGCGTTACGCTGACCAACCTGGGTGCCGACATCGCCCGCggg                                                                <  2:2240786/93‑1 (MQ=255)
                         aaTGATGTTCCTGCCACCAATGTACTGATTGAAGGCAGTATTGATAACGATCGCGTTACGCTGACCAACCTGGGTGCCGACATCGCCCGCggg                                                                <  1:1986180/93‑1 (MQ=255)
                         aaTGATGTTCCTGCCACCAATGTACTGATTGAAGGCAGTATTGATAACGATCGCGTTACGCTGACCAACCTGGGTGCCGACATCGCCCGCggg                                                                >  1:5300474/1‑93 (MQ=255)
                         aaTGATGTTCCTGCCACCAATGTACTGATTGAAGGCAGTATTGATAACGATCGCGTTACGCTGACCAACCTGGGTGCCGACATCGCCCGCggg                                                                >  2:2576196/1‑93 (MQ=255)
                           tgatgTTCCTGCCACCAATGTACTGATTGAAGGCAGTATTGATAACGATCGCGTTACGCTGACCAACCTGGGTGCCGACATCGCCCGCGGGAc                                                              >  2:2882447/1‑93 (MQ=255)
                           tgatgTTCCTGCCACCAATGTACTGATTGAAGGCAGTATTGATAACGATCGCGTTACGCTGACCAACCTGGGTGCCGACATCGCCCGCGGGAc                                                              >  1:1495122/1‑93 (MQ=255)
                           tgatgTTCCTGCCACCAATGTACTGATTGAAGGCAGTATTGATAACGATCGCGTTACGCTGACCAACCTGGGTGCCGACATCGCCCGCGGGAc                                                              >  1:5937478/1‑93 (MQ=255)
                           taatgTACCTACCACCATTGTACTGATTGAAGGCAATATTAATAACGAAAACGATCCGCTGACCAACCAGGGTGCAAACATCGCCCGCGGGAc                                                              <  2:7009207/91‑1 (MQ=255)
                            gatgTTCCTGCCACCAATGTACTGATTGAAGGCAGTATTGATAACGATCGCGTTACGCTGACCAACCTGGGTGCCGACATCGCCCGCGGGACa                                                             <  1:2833163/93‑1 (MQ=255)
                            gatgTTCCTGCCACCAATGTACTGATTGAAGGCAGTATTGATAACGATCGCGTTACGCTGACCAACCTGGGTGCCGACATCGCCCGCGGGACa                                                             >  1:6052567/1‑93 (MQ=255)
                             atgTTCCTGCCACCAATGTACTGATTGAAGGCAGTATTGATAACGATCGCGTTACGCTGACCAACCTGGGTGCCGACATCGCCCGCGGGACAt                                                            >  1:3651766/1‑93 (MQ=255)
                             atgTTCCTGCCACCAATGTACTGATTGAAGGCAGTATTGATAACGATCGCGTTACGCTGACCAACCTGGGTGCCGACATCGCCCGCGGGACAt                                                            <  1:6295173/93‑1 (MQ=255)
                              tgTTCCTGCCACCAATGTACTGATTGAAGGCAGTATTGATAACGATCGCGTTACGCTGACCAACCTGGGTGCCGACATCGCCCGCGGGACAtt                                                           <  1:4270660/93‑1 (MQ=255)
                              tgTTCCTGCCACCAATGTACTGATTGAAGGCAGTATTGATAACGATCGCGTTACGCTGACCAACCTGGGTGCCGACATCGCCCGCGGGACAtt                                                           >  1:353892/1‑93 (MQ=255)
                              tgTTCCTGCCACCAATGTACTGATTGAAGGCAGTATTGATAACGATCGCGTTACGCTGACCAACCTGGGTGCCGACATCGCCCGCGGGAAAtt                                                           >  2:3028167/1‑93 (MQ=255)
                                ttCCTGCCACCAATGTACTGATTGAAGGCAGTATTGATAACGATCGCGTTACGCTGACCAACCTGGGTGCCGACATCGCCCGCGGGACATTac                                                         >  2:6619631/1‑92 (MQ=255)
                                ttCCTGCCACCAATGTACTGATTGAAGGCAGTATTGATAACGATCGCGTTACGCTGACCAACCTGGGTGCCGACATCGCCCGCGGGACATTaa                                                         <  1:4210050/93‑1 (MQ=255)
                                 tCCTGCCACCAATGTACTGATTGAAGGCAGTATTGATAACGATCGCGTTACGCTGACCAACCTGGGTGCCGACATCGCCCGCGGGACATTAAc                                                        >  1:5678303/1‑93 (MQ=255)
                                 tCCTGCCACCAATGTACTGATTGAAGGCAGTATTGATAACGATCGCGTTACGCTGACCAACCTGGGTGCCGACATCGCCCGCGGGACATTAAc                                                        <  2:7494323/93‑1 (MQ=255)
                                 tCCTGCCACCAATGTACTGATTGAAGGCAGTATTGATAACGATCGCGTTACGCTGACCAACCTGGGTGCCGACATCGCCCGCGGGACATTAAc                                                        <  2:6191616/93‑1 (MQ=255)
                                 tCCTGCCACCAATGTACTGATTGAAGGCAGTATTGATAACGATCGCGTTACGCTGACCAACCTGGGTGCCGACATCGCCCGCGGGACATTAAc                                                        <  2:597465/93‑1 (MQ=255)
                                 tCCTGCCACCAATGTACTGATTGAAGGCAGTATTGATAACGATCGCGTTACGCTGACCAACCTGGGTGCCGACATCGCCCGCGGGACATTAAc                                                        >  2:1916974/1‑93 (MQ=255)
                                   cTGCCACCAATGTACTGATTGAAGGCAGTATTGATAACGATCGCGTTACGCTGACCAACCTGGGTGCCGACATCGCCCGCGGGACATTAACCg                                                      <  2:5514569/93‑1 (MQ=255)
                                   cTGCCACCAATGTACTGATTGAAGGCAGTATTGATAACGATCGCGTTACGCTGACCAACCTGGGTGCCGACATCGCCCGCGGGACATTAACCg                                                      >  2:1489729/1‑93 (MQ=255)
                                     gCCACCAATGTACTGATTGAAGGCAGTATTGATAACGATCGCGTTACGCTGACCAACCTGGGTGCCGACATCGCCCGCGGGACATTAACCGGa                                                    >  2:523016/1‑93 (MQ=255)
                                       caccaATGTACTGATTGAAGGCAGTATTGATAACGATCGCGTTACGCTGACCAACCTGGGTGCCGACATCGCCCGCGGGACATTAACCGGaaa                                                  <  1:3931835/93‑1 (MQ=255)
                                       caccaATGTACTGATTGAAGGCAGTATTGATAACGATCGCGTTACGCTGACCAACCTGGGTGCCGACATCGCCCGCGGGACATTAACCGGaaa                                                  <  1:7116386/93‑1 (MQ=255)
                                        accaATGTACTGATTGAAGGCAGTATTGATAACGATCGCGTTACGCTGACCAACCTGGGTGCCGACATCGCCCGCGGGACATTAACCGGAAAc                                                 >  1:925503/1‑93 (MQ=255)
                                          caATGTACTGATTGAAGGCAGTATTGATAACGATCGCGTTACGCTGACCAACCTGGGTGCCGACATTGCCCGCGGGACATTAACCGGAAAcgc                                               >  2:7164905/1‑93 (MQ=255)
                                          caATGTACTGATTGAAGGCAGTATTGATAACGATCGCGTTACGCTGACCAACCTGGGTGCCGACATCGCCCGCGGGACATTAACCGGAAAcgc                                               >  2:3809688/1‑93 (MQ=255)
                                           aaTGTACTGATTGAAGGCAGTATTGATAACGATCGCGTTACGCTGACCAACCTGGGTGCCGACATCGCCCGCGGGACATTAACCGGAAAcgcg                                              >  2:1070255/1‑93 (MQ=255)
                                             tGTACTGATTGAAGGCAGTATTGATAACGATCGCGTTACGCTGACCAACCTGGGTGCCGACATCGCCCGCGGGACATTAACCGGAAACGCGCa                                            >  2:2367649/1‑93 (MQ=255)
                                             tGTACTGATTGAAGGCAGCATTGATAACGATCGCGTTACGCTGACCAACCTGGGTGCCGACATCGCCCGCGGGACATTAACCGGAAACGCGCa                                            >  2:7835803/1‑93 (MQ=255)
                                              gTACTGATTGAAGGCAGTATTGATAACGATCGCGTTACGCTGACCAACCTGGGTGCCGACATCGCCCGCGGGACATTAACCGGAAACGCGCAg                                           >  1:6930737/1‑93 (MQ=255)
                                                  tGATTGAAGGCAGTATTGATAACGATCGCGTTACGCTGACCAACCTGGGTGCCGACATCGCCCGCGGGACATTAACCGGAAACGCGCAGCGTa                                       >  1:7610516/1‑93 (MQ=255)
                                                   gATTGAAGGCAGTATTGATAACGATCGCGTTACGCTGACCAACCTGGGTGCCGACATCGCCCGCGGGACATTAACCGGAAACGCGCAGCGTaa                                      >  2:5102816/1‑93 (MQ=255)
                                                   gATTGAAGGCAGTATTGATAACGATCGCGTTACGCTGACCAACCTGGGTGCCGACATCGCCCGCGGGACATTAACCGGAAACGCGCAGCGTaa                                      >  1:2952275/1‑93 (MQ=255)
                                                    aTTGAAGGCAGTATTGATAACGATCGCGTTACGCTGACCAACCTGGGTGCCGACATCGCCCGCGGGACATTAACCGGAAACGCGCAGCGTAAc                                     <  1:7871104/93‑1 (MQ=255)
                                                      tGAAGGCAGTATTGATAACGATCGCGTTACGCTGACCAACCTGGGTGCCGACATCGCCCGCGGGACATTAACCGGAAACGCGCAGCGTAACGc                                   >  1:1031303/1‑93 (MQ=255)
                                                      tGAAGGCAGTATTGATAACGATCGCGTTACGCTGACCAACCTGGGTGCCGACATCGCCCGCGGGACATTAACCGGAAACGCGCAGCGTAACGc                                   <  1:3268047/93‑1 (MQ=255)
                                                       gAAGGCAGTATTGATAACGATCGCGTTACGCTGACCAACCTGGGTGCCGACATCGCCCGCGGGACATTAACCGGAAACGCGCAGCGTAACGcc                                  >  2:1137775/1‑93 (MQ=255)
                                                       gAAGGCAGTATTGATAACGATCGCGTTACGCTGACCAACCTGGGTGCCGACATCGCCCGCGGGACATTAACCGGAAACGCGCAGCGTAACGcc                                  <  1:5519130/93‑1 (MQ=255)
                                                       gAAGGCAGTATTGATAACGATCGCGTTACGCTGACCAACCTGGGTGCCGACATCGCCCGCGGGACATTAACCGGAAACGCGCAGCGTAACGcc                                  >  1:4911110/1‑93 (MQ=255)
                                                         aGGCAGTATTGATAACGATCGCGTTACGCTGACCAACCTGGGTGCCGACATCGCCCGCGGGACATTAACCGGAAACGCGCAGCGTAACGCCGa                                <  1:1540793/93‑1 (MQ=255)
                                                          ggCAGTATTGATAACGATCGCGTTACGCTGACCAACCTGGGTGCCGACATCGCCCGCGGGACATTAACCGGAAACGCGCAGCGTAACGCCGAc                               >  2:480449/1‑93 (MQ=255)
                                                           gCAGTATTGATAACGATCGCGTTACGCTGACCAACCTGGGTGCCGACATCGCCCGCGGGACATTAACCGGAAACGCGCAGCGTAACGCCGACg                              >  1:1898180/1‑93 (MQ=255)
                                                             aGTATTGATAACGATCGCGTTACGCTGACCAACCTGGGTGCCGACATCGCCCGCGGGACATTAACCGGAAACGCGCAGCGTAACGCCGACGGc                            >  1:7432804/1‑93 (MQ=255)
                                                             aGTATTGATAACGATCGCGTTACGCTGACCAACCTGGGTGCCGACATCGCCCGCGGGACATTAACCGGAAACGCGCAGCGTAACGCCGACGGc                            >  1:1284317/1‑93 (MQ=255)
                                                               tATTGATAACGATCGCGTTACGCTGACCAACCCGGGTGCCGACATCGCCCGCGGGACATTAACCGGAAACGCGCAGCGTAACGCCGACGGCac                          >  1:6450971/1‑92 (MQ=255)
                                                                  tGATAACGATCGCGTTACGCTGACCAACCTGGGTGCCGACATCGCCCGCGGGACATTAACCGGAAACGCGCAGCGTAACGCCGACGGCAGCTg                       >  1:4636897/1‑93 (MQ=255)
                                                                   gATAACGATCGCGTTACGCTGACCAACCTGGGTGCCGACATCGCCCGCGGGACATTAACCGGAAACGCGCAGCGTAACGCCGACGGCAGCTgg                      <  2:6522378/93‑1 (MQ=255)
                                                                      aaCGATCGCGTTACGCTGACCAAGCTGGGTGCCGACATCGCCCGCGGGACATTAACCGGAAACGCGCAGCGTAACGCCGACGGCAGCTGGCaa                   <  2:4347717/93‑1 (MQ=255)
                                                                      aaCGATCGCGTTACGCTGACCAACCTGGGTGCCGACATCGCCCGCGGGACATTAACCGGAAACGCGCAGCGTAACGCCGACGGCAGCTGGCaa                   <  1:3349089/93‑1 (MQ=255)
                                                                          aTCGCGTTACGCTGACCAACCTGGGTGCCGACATCGCCCGCGGGACATTAACCGGAAACGCGCAGCGTAACGCCGACGGCAGCTGGCAAGTgg               <  1:7930275/93‑1 (MQ=255)
                                                                          aTCGCGTTACGCTGACCAACCTGGGTGCCGACATCGCCCGCGGGACATTAACCGGAAACGCGCAGCGTAACGCCGACGGCAGCTGGCAAGTgg               >  2:5352169/1‑93 (MQ=255)
                                                                           tCGCGTTACGCTGACCAACCTGGGTGCCGACATCGCCCGCGGGACATTAACCGGAAACGCGCAGCGTAACGCCGACGGCAGCTGGCAAGTGGa              >  2:3637153/1‑93 (MQ=255)
                                                                           tCGCGTTACGCTGACCAACCTGGGTGCCGACATCGCCCGCGGGACATTAACCGGAAACGCGCAGCGTAACGCCGACGGCAGCTGGCAAGTGGa              >  1:4061641/1‑93 (MQ=255)
                                                                            cgcgTTACGCTGACCAACCTGGGTGCCGACATCGCCCGCGGGACATTAACCGGAAACGCGCAGCGTAACGCCGACGGCAGCTGGCAAGTGGaa             >  2:7279351/1‑93 (MQ=255)
                                                                            cgcgTTACGCTGACCAACCTGGGTGCCGACATCGCCCGCGGGACATTAACCGGAAACGCGCAGCGTAACGCCGACGGCAGCTGGCAAGTGGaa             <  1:3131837/93‑1 (MQ=255)
                                                                             gcgTTACGCTGACCAACCTGGGTGCCGACATCGCCCGCGGGACATTAACCGGAAACGCGCAGCGTAACGCCGACGGCAGCTGGCAAGTGGaaa            >  1:1209218/1‑93 (MQ=255)
                                                                               gTTACGCTGACCAACCTGGGTGCCGACATCGCCCGCGGGACATTAACCGGAAACGCGCAGCGTAACGCCGACGGCAGCTGGCAAGTGGAAAAc          >  2:4196766/1‑93 (MQ=255)
                                                                                ttACGCTGACCAACCTGGGTGCCGACATCGCCCGCGGGACATTAACCGGAAACGCGCAGCGTAACGCCGACGGCAGCTGGCAAGTGGAAAAcc         <  1:6650637/93‑1 (MQ=255)
                                                                                ttACGCTGACCAACCTGGGTGCCGACATCGCCCGCGGGACATTAACCGGAAACGCGCAGCGTAACGCCGACGGCAGCTGGCAAGTGGAAAAcc         <  2:757357/93‑1 (MQ=255)
                                                                                 tACGCTGACCAACCTGGGTGCCGACATCGCCCGCGGGACATTAACCGGAAACGCGCAGCGTAACGCCGACGGCAGCTGGCAAGTGGAAAACCt        <  1:3156917/93‑1 (MQ=255)
                                                                                 tACGCTGACCAACCTGGGTGCCGACATCGCCCGCGGGACATTAACCGGAAACGCGCAGCGTAACGCCGACGGCAGCTGGCAAGTGGAAAACCt        <  2:352745/93‑1 (MQ=255)
                                                                                    gCTGACCAACCTGGGTGCCGACATCGCCCGCGGGACATTAACCGGAAACGCGCAGCGTAACGCCGACGGCAGCTGGCAAGTGGAAAAccgcgc     >  2:7705506/1‑89 (MQ=255)
                                                                                    gCTGACCAACCTGGGTGCCGACATCGCCCGCGGGACATTAACCGGAAACGCGCAGCGTAACGCCGACGGCAGCTGGCAAGTGGAAAACCTgcg     >  1:477723/1‑93 (MQ=255)
                                                                                    gCTGACCAACCTGGGTGCCGACATCGCCCGCGGGACATTAACCGGAAACGCGCAGCGTAACGCCGACGGCAGCTGGCAAGTGGAAAACCTgcg     <  2:4911935/93‑1 (MQ=255)
                                                                                    gCTGACCAACCTGGGTGCCGACATCGCCCGCGGGACATTAACCGGAAACGCGCAGCGTAACGCCGACGGCAGCTGGCAAGTGGAAAACCTgcg     <  2:2703037/93‑1 (MQ=255)
                                                                                    gCTGACCAACCTGGGTGCCGACATCGCCCGCGGGACATTAACCGGAAACGCGCAGCGTAACGCCGACGGCAGCTGGCAAGTGGAAAACCTgcg     >  1:1855587/1‑93 (MQ=255)
                                                                                     cTGACCAACCTGGGTGCCGACATCGCCCGCGGGACATTAACCGGACACGCGCAGCGTAACGCCGACGGCAGCTGGCAAGTCGAAACCCTgcgc    >  2:6890439/1‑93 (MQ=255)
                                                                                     cTGACCAACCTGGGTGCCGACATCGCCCGCGGGACATTAACCGGAAACGCGCAGCGTAACGCCGACGGCAGCTGGCAAGTGGAAAACCTgcgc    >  1:684572/1‑93 (MQ=255)
                                                                                      tGACCAACCTGGGTGCCGACATCGCCCGCGGGACATTAACCGGAAACGCGCAGCGTAACGCCGACGGCAGCTGGCAAGTGGAAAACCTGCGCa   <  1:4842636/93‑1 (MQ=255)
                                                                                      tGACCAACCTGGGTGCCGACATCGCCCGCGGGACATTAACCGGAAACGCGCAGCGTAACGCCGACGGCAGCTGGCAAGTGGAAAACCTGCGCa   <  2:3393074/93‑1 (MQ=255)
                                                                                      tGACCAACCTGGGTGCCGACATCGCCCGCGGGACATTAACCGGAAACGCGCAGCGTAACGCCGACGGCAGCTGGCAAGTGGAAAACCTGCGCa   <  1:2333567/93‑1 (MQ=255)
                                                                                       gACCAACCTGGGTGCCGACATCGCCCGCGGGACATTAACCGGAAACGCGCAGCGTAACGCCGACGGCAGCTGGCAAGTGGAAAACCTGCGCAt  <  1:2579229/93‑1 (MQ=255)
                                                                                       gACCAACCTGGGTGCCGACATCGCCCGCGGGACATTAACCGGAAACGCGCAGCGTAACGCCGACGGCAGCTGGCAAGTGGAAAACCTGCGCAt  <  1:5784434/93‑1 (MQ=255)
                                                                                          |                                                                                         
GTTTAGTGCCGGATCGCTTTCGCTCAATGATGTTCCTGCCACCAATGTACTGATTGAAGGCAGTATTGATAACGATCGCGTTACGCTGACTAACCTGGGTGCCGACATCGCCCGCGGGACATTAACCGGAAACGCGCAGCGTAACGCCGACGGCAGCTGGCAAGTGGAAAACCTGCGCAT  >  NC_000913/3828584‑3828763

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 

GATK/CNVnator alignment

BRESEQ :: bam2aln output Only 200 of 271 total aligned reads displayed.
TCAGTTTAGTGCCGGATCGCTTTCGCTCAATGATGTTCCTGCCACCAATGTACTGATTGAAGGCAGTATTGATAACGATCGCGTTACGCTGACTAACCTGGGTGCCGACATCGCCCGCGGGACATTAACCGGAAACGCGCAGCGTAACGCCGACGGCAGCTGGCAAGTGGAAAACCTGCGCATGGCG  >  NC_000913/3828581‑3828767
                                                                                             |                                                                                             
TCAGTTTAGTGCCGGATCGCTTTCGCTCAATGATGTTCCTGCCACCAATGTACTGATTGAAGGCAGTATTGATAACGATCGCGTTACGCTGACC                                                                                               <  SRR4302543.6796631/94‑1 (MQ=60)
 CAGTTTAGTGCCGGATCGCTTTCGCTCAATGATGTTCCTGCCACCAATGTACTGATTGAAGGCAGTATTGATAACGATCGCGTTACGCTGACCA                                                                                              >  SRR4302543.2306803/1‑94 (MQ=60)
   GTTTAGTGCCGGATCGCTTTCGCTCAATGATGTTCCTGCCACCAATGTACTGATTGAAGGCAGTATTGATAACGATCGCGTTACGCTGACCAAC                                                                                            >  SRR4302543.1911355/1‑94 (MQ=60)
   GTTTAGTGCCGGATCGCTTTCGCTCAATGATGTTCCTGCCACCAATGTACTGATTGAAGGCAGTATTGATAACGATCGCGTTACGCTGACCAAC                                                                                            >  SRR4302543.7808548/1‑94 (MQ=60)
   GTTTAGTGCCGGATCGCTTTCGCTCAATGATGTTCCTGCCACCAATGTACTGATTGAAGGCAGTATTGATAACGATCGCGTTACGCTGACCAAC                                                                                            >  SRR4302543.1609998/1‑94 (MQ=60)
    TTTAGTGCCGGATCGCTTTCGCTCAATGATGTTCCTGCCACCAATGTACTGATTGAAGGCAGTATTGATAACGATCGCGTTACGCTGACCAACC                                                                                           >  SRR4302543.6032022/1‑94 (MQ=60)
    TTTAGTGCCGGATCGCTTTCGCTCAATGATGTTCCTGCCACCAATGTACTGATTGAAGGCAGTATTGATAACGATCGCGTTACGCTGACCAACC                                                                                           >  SRR4302543.4025808/1‑94 (MQ=60)
     TTAGTGCCGGATCGCTTTCGCTCAATGATGTTCCTGCCACCAATGTACTGATTGAAGGCAGTATTGATAACGATCGCGTTACGCTGACCAACCT                                                                                          >  SRR4302543.6436610/1‑94 (MQ=60)
     TTAGTGCCGGATCGCTTTCGCTCAATGATGTTCCTGCCACCAATGTACTGATTGAAGGCAGTATTGATAACGATCGCGTTACGCTGACCAACCT                                                                                          <  SRR4302543.5596370/94‑1 (MQ=60)
     TTAGTGCCGGATCGCTTTCGCTCAATGATGTTCCTGCCACCAATGTACTGATTGAAGGCAGTATTGATAACGATCGCGTTACGCTGACCAACCT                                                                                          >  SRR4302543.4138511/1‑94 (MQ=60)
      TAGTGCCGGATCGCTTTCGCTCAATGATGTTCCTGCCACCAATGTACTGATTGAAGGCAGTATTGATAACGATCGCGTTACGCTGACCAACCTG                                                                                         >  SRR4302543.4356022/1‑94 (MQ=60)
      TAGTGCCGGATCGCTTTCGCTCAATGATGTTCCTGCCACCAATGTACTGATTGAAGGCAGTATTGATAACGATCGCGTTACGCTGACCAACCTG                                                                                         <  SRR4302543.1471745/94‑1 (MQ=60)
       AGTGCCGGATCGCTTTCGCTCAATGATGTTCCTGCCACCAATGTACTGATTGAAGGCAGTATTGATAACGATCGCGTTACGCTGACCAACCTGG                                                                                        <  SRR4302543.960342/94‑1 (MQ=60)
         TGCCGGATCGCTTTCGCTCAATGATGTTCCTGCCACCAATGTACTGATTGAAGGCAGTATTGATAACGATCGCGTTACGCTGACCAACCTGGGT                                                                                      <  SRR4302543.2962322/94‑1 (MQ=60)
         TGCCGGATCGCTTTCGCTCAATGATGTTCCTGCCACCAATGTACTGATTGAAGGCAGTATTGATAACGATCGCGTTACGCTGACCAACCTGGGT                                                                                      <  SRR4302543.3824448/94‑1 (MQ=60)
         TGCCGGATCGCTTTCGCTCAATGATGTTCCTGCCACCAATGTACTGATTGAAGGCAGTATTGATAACGATCGCGTTACGCTGACCAACCTGGGT                                                                                      <  SRR4302543.5383346/94‑1 (MQ=60)
           CCGGATCGCTTTCGCTCAATGATGTTCCTGCCACCAATGTACTGATTGAAGGCAGTATTGATAACGATCGCGTTACGCTGACCACCCTGGGTGC                                                                                    >  SRR4302543.2191392/1‑94 (MQ=60)
           CCGGATCGCTTTCGCTCAATGATGTTCCTGCCACCAATGTACTGATTGAAGGCAGTATTGATAACGATCGCGTTACGCTGACCAACCTGGGTGC                                                                                    <  SRR4302543.5538808/94‑1 (MQ=60)
           CCGGATCGCTTTCGCTCAATGATGTTCCTGCCACCAATGTACTGATTGAAGGCAGTATTGATAACGATCGCGTTACGCTGACCAACCTGGGTGC                                                                                    >  SRR4302543.1294650/1‑94 (MQ=60)
           CCGGATCGCTTTCGCTCAATGATGTTCCTGCCACCAATGTACTGATTGAAGGCAGTATTGATAACGATCGCGTTACGCTGACCAACCTGGGTGC                                                                                    >  SRR4302543.3463779/1‑94 (MQ=60)
            CGGATCGCTTTCGCTCAATGATGTTCCTGCCACCAATGTACTGATTGAAGGCAGTATTGATAACGATCGCGTTACGCTGACCAACCTGGGTGCC                                                                                   >  SRR4302543.1849764/1‑94 (MQ=60)
            CGGATCGCTTTCGCTCAATGATGTTCCTGCCACCAATGTACTGATTGAAGGCAGTATTGATAACGATCGCGTTACGCTGACCAACCTGGGTGCC                                                                                   >  SRR4302543.7355450/1‑94 (MQ=60)
            CGGATCGCTTTCGCTCAATGATGTTCCTGCCACCAATGTACTGATTGAAGGCAGTATTGATAACGATCGCGTTACGCTGACCAACCTGGGTGCC                                                                                   >  SRR4302543.3505777/1‑94 (MQ=60)
             GGATCGCTTTCGCTCAATGATGTTCCTGCCACCAATGTACTGATTGAAGGCAGTATTGATAACGATCGCGTTACGCTGACCAACCTGGGTGCCG                                                                                  <  SRR4302543.2968891/94‑1 (MQ=60)
             GGATCGCTTTCGCTCAATGATGTTCCTGCCACCAATGTACTGATTGAAGGCAGTATTGATAACGATCGCGTTACGCTGACCAACCTGGGTGCCG                                                                                  >  SRR4302543.6949126/1‑94 (MQ=60)
             GGATCGCTTTCGCTCAATGATGTTCCTGCCACCAATGTACTGATTGAAGGCAGTATTGATAACGATCGCGTTACGCTGACCAACCTGGGTGCCG                                                                                  >  SRR4302543.3174815/1‑94 (MQ=60)
             GGATCGCTTTCGCTCAATGATGTTCCTGCCACCAATGTACTGATTGAAGGCAGTATTGATAACGATCGCGTTACGCTGACCAACCTGGGTGCCG                                                                                  >  SRR4302543.3105489/1‑94 (MQ=60)
             GGATCGCTTTCGCTCAATGATGTTCCTGCCACCAATGTACTGATTGAAGGCAGTATTGATAACGATCGCGTTACGCTGACCAACCTGGGTGCCG                                                                                  >  SRR4302543.6760870/1‑94 (MQ=60)
             GGATCGCTTTCGCTCAATGATGTTCCTGCCACCAATGTACTGATTGAAGGCAGTATTGATAACGATCGCGTTACGCTGACCAACCTGGGTGCCG                                                                                  >  SRR4302543.1241893/1‑94 (MQ=60)
              GATCGCTTTCGCTCAATGATGTTCCTGCCACCAATGTACTGATTGAAGGCAGTATTGATAACGATCGCGTTACGCTGACCAACCTGGGTGCCGA                                                                                 >  SRR4302543.4859115/1‑94 (MQ=60)
              GATCGCTTTCGCTCAATGATGTTCCTGCCACCAATGTACTGATTGAAGGCAGTATTGATAACGATCGCGTTACGCTGACCAACCTGGGTGCCGA                                                                                 >  SRR4302543.4635710/1‑94 (MQ=60)
              GATCGCTTTCGCTCAATGATGTTCCTGCCACCAATGTACTGATTGAAGGCAGTATTGATAACGATCGCGTTACGCTGACCAACCTGGGTGCCGA                                                                                 >  SRR4302543.5972909/1‑94 (MQ=60)
               ATCGCTTTCGCTCAATGATGTTCCTGCCTCCAATGTACTGATTGAAGGCAGTATTAATAACGCTCGCGGTACGCTGTCCAACCTGCGCGCCGAC                                                                                >  SRR4302543.1686275/1‑94 (MQ=60)
               ATCGCTTTCGCTCAATGATGTTCCTGCCACCAATGTACTGATTGAAGGCAGTATTGATAACGATCGCGTTACGCTGACCAACCTGGGTGCCGAC                                                                                <  SRR4302543.1865909/94‑1 (MQ=60)
               ATCGCTTTCGCTCAATGATGTTCCTGCCACCAATGTACTGATTGAAGGCAGTATTGATAACGATCGCGTTACGCTGACCAACCTGGGTGCCGAC                                                                                >  SRR4302543.4519819/1‑94 (MQ=60)
               ATCGCTTTCGCTCAATGATGTTCCTGCCACCAATGTACTGATTGAAGGCAGTATTGATAACGATCGCGTTACGCTGACCAACCTGGGTGCCGAC                                                                                >  SRR4302543.5047305/1‑94 (MQ=60)
               ATCGCTTTCGCTCAATGATGTTCCTGCCACCAATGTACTGATTGAAGGCAGTATTGATAACGATCGCGTTACGCTGACCAACCTGGGTGCCGAC                                                                                <  SRR4302543.7154349/94‑1 (MQ=60)
               ATCGCTTTCGCTCAATGATGTTCCTGCCACCAATGTACTGATTGAAGGCAGTATTGATAACGATCGCGTTACGCTGACCAACCTGGGTGCCGAC                                                                                >  SRR4302543.1686276/1‑94 (MQ=60)
               ATCGCTTTCGCTCAATGATGTTCCTGCCACCAATGTACTGATTGAAGGCAGTATTGATAACGATCGCGTTACGCTGACCAACCTGGGTGCCGAC                                                                                >  SRR4302543.1775586/1‑94 (MQ=60)
               ATCGCTTTCGCTCAATGATGTTCCTGCCACCAATGTACTGATTGAAGGCAGTATTGATAACGATCGCGTTACGCTGACCAACCTGGGTGCCGAC                                                                                >  SRR4302543.1949576/1‑94 (MQ=60)
                TCGCTTTCGCTCAATGATGTTCCTGCCACCAATGTACTGATTGAAGGCAGTATTGATAACGATCGCGTTACGCTGACCAACCTGGGTGCCGACA                                                                               <  SRR4302543.6351150/94‑1 (MQ=60)
                  GCTTTCGCTCAATGATGTTCCTGCCACCAATGTACTGATTGAAGGCAGTATTGATAACGATCGCGTTACGCTGACCAACCTGGGTGCCGACATC                                                                             <  SRR4302543.4355711/94‑1 (MQ=60)
                     TTCGCTCAATGATGTTCCTGCCACCAATGTACTGATTGAAGGCAGTATTGATAACGATCGCGTTACGCTGACCAACCTGGGTGCCGACATCGCC                                                                          >  SRR4302543.938630/1‑94 (MQ=60)
                      TCGCTCAATGATGTTCCTGCCACCAATGTACTGATTGAAGGCAGTATTGATAACGATCGCGTTACGCTGACCAACCTGGGTGCCGACATCGCCC                                                                         >  SRR4302543.5239060/1‑94 (MQ=60)
                        GCTCAATGATGTTCCTGCCACCAATGTACTGATTGAAGGCAGTATTGATAACGATCGCGTTACGCTGACCAACCTGGGTGCCGACATCGCCCGC                                                                       >  SRR4302543.4932913/1‑94 (MQ=60)
                         CTCAATGATGTTCCTGCCACCAATGTACTGATTGAAGGCAGTATTGATAACGATCGCGTTACGCTGACTAACCTGGGTGCCGACATCGCCCGCG                                                                      <  SRR4302543.6182605/94‑1 (MQ=60)
                         CTCAATGATGTTCCTGCCACCAATGTACTGATTGAAGGCAGTATTGATAACGATCGCGTTACGCTGACCAACCTGGGTGCCGACATCGCCCGCG                                                                      >  SRR4302543.4610739/1‑94 (MQ=60)
                         CTCAATGATGTTCCTGCCACCAATGTACTGATTGAAGGCAGTATTGATAACGATCGCGTTACGCTGACCAACCTGGGTGCCGACATCGCCCGCG                                                                      <  SRR4302543.1218943/94‑1 (MQ=60)
                           CAATGATGTTCCTGCCACCAATGTACTGATTGAAGGCAGTATTGATAACTATCGCGTTTCGTTGACCAACCTGGGTGCCTACTTCGCCCGCGGT                                                                    >  SRR4302543.7080216/1‑94 (MQ=60)
                           CAATGATGTTCCTGCCACCAATGTACTGATTGAAGGCAGTATTGATAACGATCGCGTTACGCTGACCAACCTGGGTGCCGACATCGCCCGCGGG                                                                    >  SRR4302543.5348326/1‑94 (MQ=60)
                           CAATGATGTTCCTGCCACCAATGTACTGATTGAAGGCAGTATTGATAACGATCGCGTTACGCTGACCAACCTGGGTGCCGACATCGCCCGCGGG                                                                    <  SRR4302543.6766719/94‑1 (MQ=60)
                           CAATGATGTTCCTGCCACCAATGTACTGATTGAAGGCAGTATTGATAACGATCGCGTTACGCTGACCAACCTGGGTGCCGACATCGCCCGCGGG                                                                    >  SRR4302543.2635355/1‑94 (MQ=60)
                           CAATGATGTTCCTGCCACCAATGTACTGATTGAAGGCAGTATTGATAACGATCGCGTTACGCTGACCAACCTGGGTGCCGACATCGCCCGCGGG                                                                    >  SRR4302543.3245317/1‑94 (MQ=60)
                            AATGATGTTCCTGCCACCAATGTACTGATTGAAGGCAGTATTGATAACGATCGCGTTACGCTGACCAACCTGGGTGCCGACATCGCCCGCGGGA                                                                   >  SRR4302543.4565507/1‑94 (MQ=60)
                            AATGATGTTCCTGCCACCAATGTACTGATTGAAGGCAGTATTGATAACGATCGCGTTACGCTGACCAACCTGGGTGCCGACATCGCCCGCGGGA                                                                   <  SRR4302543.2003987/94‑1 (MQ=60)
                            AATGATGTTCCTGCCACCAATGTACTGATTGAAGGCAGTATTGATAACGATCGCGTTACGCTGACCAACCTGGGTGCCGACATCGCCCGCGGGA                                                                   >  SRR4302543.7899525/1‑94 (MQ=60)
                             ATGATGTTCCTGCCACCAATGTACTGATTGAAGGCAGTATTGATAACGATCGCGTTACGCTGACCAACCTGGGTGCCGACATCGCCCGCGGGAC                                                                  >  SRR4302543.1508572/1‑94 (MQ=60)
                              TGATGTTCCTGCCACCAATGTACTGATTGAAGGCAGTATTGATAACGATCGCGTTACGCTGACCAACCTGGGTGCCGACATCGCCCGCGGGACA                                                                 >  SRR4302543.6109862/1‑94 (MQ=60)
                               GATGTTCCTGCCACCAATGTACTGATTGAAGGCAGTATTGATAACGATCGCGTTACGCTGACCAACCTGGGTGCCGACATCGCCCGCGGGACAT                                                                >  SRR4302543.3683849/1‑94 (MQ=60)
                               GATGTTCCTGCCACCAATGTACTGATTGAAGGCAGTATTGATAACGATCGCGTTACGCTGACCAACCTGGGTGCCGACATCGCCCGCGGGACAT                                                                <  SRR4302543.5960325/94‑1 (MQ=60)
                               GATGTTCCTGCCACCAATGTACTGATTGAAGGCAGTATTGATAACGATCGCGTTACGCTGACCAACCTGGGTGCCGACATCGCCCGCGGGACAT                                                                <  SRR4302543.511088/94‑1 (MQ=60)
                                ATGTTCCTGCCACCAATGTACTGATTGAAGGCAGTATTGATAACGATCGCGTTACGCTGACCAACCTGGGTGCCGACATCGCCCGCGGGACATT                                                               <  SRR4302543.6354428/94‑1 (MQ=60)
                                ATGTTCCTGCCACCAATGTACTGATTGAAGGCAGTATTGATAACGATCGCGTTACGCTGACCAACCTGGGTGCCGACATCGCCCGCGGGACATT                                                               >  SRR4302543.357162/1‑94 (MQ=60)
                                ATGTTCCTGCCACCAATGTACTGATTGAAGGCAGTATTGATAACGATCGCGTTACGCTGACCAACCTGGGCGCCGACATCGCCCGCGGGACATT                                                               <  SRR4302543.2968232/94‑1 (MQ=60)
                                 TGTTCCTGCCACCAATGTACTGATTGAAGGCAGTATTGATAACGATCGCGTTACGCTGACCAACCTGGGTGCCGACATCGCCCGCGGGACATTA                                                              <  SRR4302543.4309466/94‑1 (MQ=60)
                                  GTTCCTGCCACCAATGTACTGATTGAAGGCAGTATTGATAACGATCGCGTTACGCTGACCAACCTGGGTGCCGACATCGCCCGCGGGACATTAC                                                             >  SRR4302543.6626946/1‑94 (MQ=60)
                                   TTCCTGCCACCAATGTACTGATTGAAGGCAGTATTGATAACGATCGCGTTACGCTGACCAACCTGGGTGCCGACATCGCCCGCGGGACATTAAC                                                            <  SRR4302543.4248219/94‑1 (MQ=60)
                                   TTCCTGCCACCAATGTACTGATTGAAGGCAGTATTGATAACGATCGCGTTACGCTGACCAACCTGGGTGCCGACATCGCCCGCGGGACATTAAC                                                            >  SRR4302543.5730133/1‑94 (MQ=60)
                                     CCTGCCACCAATGTACTGATTGAAGGCATTATTGATAACGATCGCTTTACGCTGACCAACCTGGGGGCCGACATCGCCCGCGGGACATTAACCG                                                          >  SRR4302543.1061214/1‑94 (MQ=60)
                                     CCTGCCACCAATGTACTGATTGAAGGCAGTATTGATAACGATCGCGTTACGCTGACCAACCTGGGTGCCGACATCGCCCGCGGGACATTAACCG                                                          <  SRR4302543.31975/94‑1 (MQ=60)
                                     CCTGCCACCAATGTACTGATTGAAGGCAGTATTGATAACGATCGCGTTACGCTGACCAACCTGGGTGCCGACATCGCCCGCGGGACATTAACCG                                                          >  SRR4302543.6705170/1‑94 (MQ=60)
                                     CCTGCCACCAATGTACTGATTGAAGGCAGTATTGATAACGATCGCGTTACGCTGACCAACCTGGGTGCCGACATCGCCCGCGGGACATTAACCG                                                          >  SRR4302543.18441/1‑94 (MQ=60)
                                      CTGCCACCAATGTACTGATTGAAGGCAGTATTGATAACGATCGCGTTACGCTGACCAACCTGGGTGCCGACATCGCCCGCGGGACATTAACCGG                                                         <  SRR4302543.1272187/94‑1 (MQ=60)
                                      CTGCCACCAATGTACTGATTGAAGGCAGTATTGATAACGATCGCGTTACGCTGACCAACCTGGGTGCCGACATCGCCCGCGGGACATTAACCGG                                                         >  SRR4302543.4294855/1‑94 (MQ=60)
                                      CTGCCACCAATGTACTGATTGAAGGCAGTATTGATAACGATCGCGTTACGCTGACCAACCTGGGTGCCGACATCGCCCGCGGGACATTAACCGG                                                         <  SRR4302543.64406/94‑1 (MQ=60)
                                      CTGCCACCAATGTACTGATTGAAGGCAGTATTGATAACGATCGCGTTACGCTGACCAACCTGGGTGCCGACATCGCCCGCGGGACATTAACCGG                                                         <  SRR4302543.3171954/94‑1 (MQ=60)
                                      CTGCCACCAATGTACTGATTGAAGGCAGTATTGATAACGATCGCGTTACGCTGACCAACCTGGGTGCCGACATCGCCCGCGGGACATTAACCGG                                                         <  SRR4302543.2004656/94‑1 (MQ=60)
                                        TCCACCAATGTACTGATTGAAGGCAGTATTGATAACGATCGCGTTACGCTGACCACCCTGGGTGCCGACATCGCCCGCGGGACATTAACCGGAA                                                       <  SRR4302543.4927170/94‑1 (MQ=60)
                                        GCCACCAATGTACTGATTGAAGGCAGTATTGATAACGATCGCGTTACGCTGACCAACCTGGGTGCCGACATCGCCCGCGGGACATTAACCGGAA                                                       >  SRR4302543.5682487/1‑94 (MQ=60)
                                         CCACCAATGTACTGATTGAAGGCAGTATTGATAACGATCGCGTTACGCTGACCAACCTGGGTGCCGACATCGCCCGCGGGACATTAACCGGAAA                                                      <  SRR4302543.210973/94‑1 (MQ=60)
                                          CACCAATGTACTGATTGAAGGCAGTATTGATAACGATCGCGTTACGCTGACCAACCTGGGTGCCGACATCGCCCGCGGGACATTAACCGGAACC                                                     >  SRR4302543.933597/1‑94 (MQ=60)
                                          CACCAATGTACTGATTGAAGGCAGTATTGATAACGATCGCGTTACGCTGACCAACCTGGGTGCCGACATCGCCCGCGGGACATTAACCGGAAAC                                                     <  SRR4302543.1441481/94‑1 (MQ=60)
                                          CACCAATGTACTGATTGAAGGCAGTATTGATAACGATCGCGTTACGCTGACCAACCTGGGTGCCGACATCGCCCGCGGGACATTAACCGGAAAC                                                     <  SRR4302543.7185515/94‑1 (MQ=60)
                                          CACCAATGTACTGATTGAAGGCAGTATTGATAACGATCGCGTTACGCTGACCAACCTGGGTGCCGACATCGCCCGCGGGACATTAACCGGAAAC                                                     >  SRR4302543.933596/1‑94 (MQ=60)
                                          CACCAATGTACTGATTGAAGGCAGTATTGATAACGATCGCGTTACGCTGACCAACCTGGGTGCCGACATCGCCCGCGGGACATTAACCGGAAAC                                                     <  SRR4302543.807128/94‑1 (MQ=60)
                                          CACCAATGTACTGATTGAAGGCAGTATTGATAACGATCGCGTTACGCTGACCAACCTGGGTGCCGACATCGCCCGCGGGACATTAACCGGAAAC                                                     <  SRR4302543.5902895/94‑1 (MQ=60)
                                          CACCAATGTACTGATTGAAGGCAGTATTGATAACGATCGCGTTACGCTGACCAACCTGGGTGCCGACATCGCCCGCGGGACATTAACCGGAAAC                                                     >  SRR4302543.7163392/1‑94 (MQ=60)
                                           CCCAATGTACTGATTGAAGGCAGTATTGATAACGATCGCGTTACGCTGACCAACCTGGGTGCCGACATCGCCCGCGGGACATTAACCGGAAACG                                                    <  SRR4302543.1809750/94‑1 (MQ=60)
                                           CCCAATGTACTGATTGAAGGCAGTATTGATAACGATCGCGTTACGCTGACCAACCTGGGTGCCGACATCGCCCGCGGGACATTAACCGGAAACG                                                    <  SRR4302543.2711888/94‑1 (MQ=60)
                                           CCCAATGTACTGAGTGAAGGCAGTATTGATAACGATCGCGTTACGCTGACCAACCTGGGTGCCGACATCGCCCGCGGGACATTAACCGGAAACG                                                    <  SRR4302543.6445925/94‑1 (MQ=60)
                                             CAATGTACTGATTGAAGGCAGTATTGATAACGATCGCGTTACGCTGACCAACCTGGGTGCCGACATCGCCCGCGGGACATTAACCGGAAACGCG                                                  >  SRR4302543.5870366/1‑94 (MQ=60)
                                              AATGTACTGATTGAAGGCAGTATTGATAACGATCGCGTTACGCTGACCAACCTGGGTGCCGACATCGCCCGCGGGACATTAACCGGAAACGCGC                                                 >  SRR4302543.6517731/1‑94 (MQ=60)
                                               ATGTACTGATTGAAGGCAGTATTGATAACGATCGCGTTACGCTGACCAACCTGGGTGCCGACATCGCCCGCGGGACATTAACCGGAAACGCGCA                                                >  SRR4302543.6038854/1‑94 (MQ=60)
                                               ATGTACTGATTGAAGGCAGTATTGATAACGATCGCGTTACGCTGACCAACCTGGGGGCCGACATCGCCCGCGGGACATTAACCGGCAACGCGCA                                                >  SRR4302543.2989911/1‑94 (MQ=60)
                                               ATGTACTGATTGAAGGCAGTATTGATAACGAGCGCGTTACGCTGACCAACCTGGGTGCCGACATCGCCCGCGGGACATTAACCGGAAACGCGCA                                                <  SRR4302543.7979140/94‑1 (MQ=60)
                                                TGTACTGATTGAAGGCAGTATTGATAACGATCGCGTTACGCTGACCAACCTGGGTGCCGACATCGCCCGCGGGACATTAACCGGAAACGCGCAG                                               >  SRR4302543.6995929/1‑94 (MQ=60)
                                                 GTACTGATTGAAGGCAGTATTGATAACGATCGCGTTACGCTGACCAACCTGGGTGCCGACATCGCCCGCGGGACATTAACCGGAAACGCGCAGG                                              >  SRR4302543.6508204/1‑94 (MQ=60)
                                                   ACTGATTGAAGGCAGTATTGATAACGATCGCGTTACGCTGACTAACCTGGGTGCCGACATCGCCCGCGGGACATTAACCGGAAACGCGCAGCGT                                            >  SRR4302543.6909038/1‑94 (MQ=60)
                                                   ACTGATTGAAGGCAGTATTGATAACGATCGCGTTACGCTGACCAACCTGGGTGCCGACATCGCCCGCGGGACATTAACCGGAAACGCGCAGCGT                                            >  SRR4302543.2895679/1‑94 (MQ=60)
                                                   ACTGATTGAAGGCAGTATTGATAACGATCGCGTTACGCTGACCAACCTGGGTGCCGACATCGCCCGCGGGACATTAACCGGAAACGCGCAGCGT                                            >  SRR4302543.7489971/1‑94 (MQ=60)
                                                    CTGATTGAAGGCAGTATTGATAACGATCGCGTTACGCTGACCAACCTGGGTGCCGACATCGCCCGCGGGACATTAACCGGAAACGCGCAGCGTA                                           >  SRR4302543.2864605/1‑94 (MQ=60)
                                                     TGATTGAAGGCAGTATTGATAACGATCGCGTTACGCTGACCACCCTGGGTGCCGACATCGCCCGCGGGCCATTAACCGGAAACGGGCAGCGAAA                                          >  SRR4302543.2451060/1‑94 (MQ=60)
                                                     TGATTGAAGGCAGTATTGATAACGATCGCGTTACGCTGACCAACCTGGGTGCCGACATCGCCCGCGGGACATTAACCGGAAACGCGCAGCGTAA                                          >  SRR4302543.4634434/1‑94 (MQ=60)
                                                     TGATTGAAGGCAGTATTGATAACGATCGCGTTACGCTGACCAACCTGGGTGCCGACATCGCCCGCGGGACATTAACCGGAAACGCGCAGCGTAA                                          <  SRR4302543.6248422/94‑1 (MQ=60)
                                                     TGATTGAAGGCAGTATTGATAACGATCGCGTTACGCTGACCAACCTGGGTGCCGACATCGCCCGCGGGACATTAACCGGAAACGCGCAGCGTAA                                          >  SRR4302543.2979084/1‑94 (MQ=60)
                                                     TGATTGAAGGCAGTATTGATAACGATCGCGTTACGCTGACCAACCTGGGTGCCGACATCGCCCGCGGGACATTAACCGGAAACGCGCAGCGGAA                                          <  SRR4302543.1962127/94‑1 (MQ=60)
                                                      GATTGAAGGCAGTAATGATAGCGATCGCGTTACGCTGACCAACCTGGGTGCCGACATCGCCCGCGGGACATTAACCGGAAACGCGCAGCGTAAC                                         <  SRR4302543.5995914/94‑1 (MQ=60)
                                                       ATTGAAGGCAGTATTGATAACGATCGCGTTACGCTGACCAACCTGGGTGCCGACATCGCCCGCGGGACATTAACCGGAAACGCGCAGCGTAACG                                        <  SRR4302543.3988297/94‑1 (MQ=60)
                                                       ATTGAAGGCAGTATTGATAACGATCGCGTTACGCTGACCAACCTGGGTGCCGACATCGCCCGCGGGACATTAACCGGAAACGCGCAGCGTAACG                                        <  SRR4302543.7945215/94‑1 (MQ=60)
                                                        TTGAAGGCAGTATTGATAACGATCGCGTTACGCTGACCAACCTGGGTGCCGACATCGCCCGCGGGACATTAACCGGAAACGCGCAGCGTAACGC                                       >  SRR4302543.1040457/1‑94 (MQ=60)
                                                        TTGAAGGCAGTATTGATAACGATCGCGTTACGCTGACCAACCTGGGTGCCGACATCGCCCGCGGGACATTAACCGGAAACGCGCAGCGTAACGC                                       >  SRR4302543.5980780/1‑94 (MQ=60)
                                                         TGAAGGCAGTATTGATAACGATCGCGTTACGCTGACCAACCTGGGTGCCGACATCGCCCGCGGGACATTAACCGGAAACGCGCAGCGTAACGCC                                      >  SRR4302543.4955871/1‑94 (MQ=60)
                                                         TGAAGGCAGTATTGATAACGATCGCGTTACGCTGACCAACCTGGGTGCCGACATCGCCCGCGGGACATTAACCGGAAACGCGCAGCGTAACGCC                                      <  SRR4302543.3297574/94‑1 (MQ=60)
                                                         TGAAGGCAGTATTGATAACGATCGCGTTACGCTGACCAACCTGGGTGCCGACATCGCCCGCGGGACATTAACCGGAAACGCGCAGCGTAACGCC                                      <  SRR4302543.1524586/94‑1 (MQ=60)
                                                         TGAAGGCAGTATTGATAACGATCGCGTTACGCTGACCAACCTGGGTGCCGACATCGCCCGCGGGACATTAACCGGAAACGCGCAGCGTAACGCC                                      <  SRR4302543.5351187/94‑1 (MQ=60)
                                                          GAAGGCAGTATTGATAACGATCGCGTTACGCTGACCAACCTGGGTGCCGACATCGCCCGCGGGACATTAACCGGAAACGCGCAGCGTAACGCCG                                     <  SRR4302543.5824968/94‑1 (MQ=60)
                                                          GAAGGCAGTATTGATAACGATCGCGTTACGCTGACCAACCTGGGTGCCGACATCGCCCGCGGGACATTAACCGGAAACGCGCAGCGTAACGCCG                                     <  SRR4302543.5569256/94‑1 (MQ=60)
                                                           AAGGCAGTATTGATAACGATCGCGTTACGCTGACCAACCTGGGTGCCGACATCGCCCGCGGGACATTAACCGGAAACGCGCAGCGTAACGCCGA                                    >  SRR4302543.5654640/1‑94 (MQ=60)
                                                           AAGGCAGTATTGATAACGATCGCGTTACGCTGACCAACCTGGGTGCCGACATCGCCCGCGGGACATTAACCGGAAACGCGCAGCGTAACGCCGA                                    >  SRR4302543.1545836/1‑94 (MQ=60)
                                                            AGGCAGTATTGATAACGATCGCGTTACGCTGACCAACCTGGGTGCCGACATCGCCCGCGGGACATTAACCGGAAACGCGCAGCGTAACGCCGAC                                   <  SRR4302543.6982781/94‑1 (MQ=60)
                                                            AGGCAGTATTGATAACGATCGCGTTACGCTGACCAACCTGGGTGCCGACATCGCCCGCGGGACATTAACCGGAAACGCGCAGCGTAACGCCGAC                                   <  SRR4302543.4683538/94‑1 (MQ=60)
                                                            AGGCAGTATTGATAACGATCGCGTTACGCTGACCAACCTGGGTGCCGACATCGCCCGCGGGACATTAACCGGAAACGCGCAGCGTAACGCCGAC                                   <  SRR4302543.1554591/94‑1 (MQ=60)
                                                             GGCAGTATTGATAACGATCGCGTTACGCTGACCAACCTGGGTGCCGACATCGCCCGCGGGACATTAACCGGAAACGCGCAGCGTAACGCCGACG                                  <  SRR4302543.2198458/94‑1 (MQ=60)
                                                              GCAGTATTGATAACGATCGCGTTACGCTGACCAACCTGGGTGCCGACATCGCCCGCGGGACATTAACCGGAAACGCGCAGCGTAACGCCGACGG                                 >  SRR4302543.8004430/1‑94 (MQ=60)
                                                               CAGTATTGATAACGATCGCGTTACGCTGACCAACCTGGGTGCCGACATCGCCCGCGGGACATTAACCGGAAACGCGCAGCGTAACGCCGACGGC                                >  SRR4302543.454281/1‑94 (MQ=60)
                                                               CAGTATTGATAACGATCGCGTTACGCTGACCAACCTGGGTGCCGACATCGCCCGCGGGACATTAACCGGAAACGCGCAGCGTAACGCCGACGGC                                >  SRR4302543.1295764/1‑94 (MQ=60)
                                                               CAGTATTGATAACGATCGCGTTACGCTGACCAACCTGGGTGCCGACATCGCCCGCGGGACATTAACCGGAAACGCGCAGCGTAACGCCGACGGC                                >  SRR4302543.498761/1‑94 (MQ=60)
                                                               CAGTATTGATAACGATCGCGTTACGCTGACCAACCTGGGTGCCGACATCGCCCGCGGGACATTAACCGGAAACGCGCAGCGTAACGCCGACGGA                                >  SRR4302543.756888/1‑94 (MQ=60)
                                                                 GTATTGATAACGATCGCGTTACGCTGACCAACCTGGGTGCCGACATCGCCCGCGGGACATTAACCGGAAACGCGCAGCGTAACGCCGACGGCAG                              >  SRR4302543.2525680/1‑94 (MQ=60)
                                                                 GTATTGATAACGATCGCGTTACGCTGACCAACCTGGGTGCCGACATCGCCCGCGGGACATTAACCGGAAACGCGCAGCGTAACGCCGACGGCAG                              <  SRR4302543.7468717/94‑1 (MQ=60)
                                                                 GTATTGATAACGATCGCGTTACGCTGACCAACCCGGGTGCCGACATCGCCCGCGGGACATTAACCGGAAACGCGCAGCGTAACGCCGACGGCAC                              >  SRR4302543.6511759/1‑94 (MQ=60)
                                                                  TATTGATAACGATCGCGTTACGCTGACCAACCTGGGTGCCGACATCGCCCGCGGGACATTAACCGGAAACGCGCAGCGTAACGCCGACGGCAGC                             >  SRR4302543.963534/1‑94 (MQ=60)
                                                                  TATTGATAACGATCGCGTTACGCTGACCAACCTGGGTGCCGACATCGCCCGCGGGACATTAACCGGAAACGCGCAGCGTAACGCCGACGGCAGC                             >  SRR4302543.5256185/1‑94 (MQ=60)
                                                                  TATTGATAACGATCGCGTTACGCCGACCAACCTGGGTGCCGACATCGCCCGCGGGACATTAACCGGAAACGCGCAGCGTAACGCCGACGGCAGC                             >  SRR4302543.7716649/1‑94 (MQ=60)
                                                                   ATTTATAACGATCGCGTTACGTTGACCAACCTGGGTGCCGACATCGCCCGCGGGACATTAACCGGAAACGCGCAGCGTAACGCCGACGGCAGCT                            <  SRR4302543.6316506/94‑1 (MQ=60)
                                                                   ATTGATAACGATCGCGTTACGCTGACCAACCTGGGTGCCGACATCGCCCcccggggccctaaccacacaaaccacgcgcccgcacccagccacc                            >  SRR4302543.5288936/1‑49 (MQ=60)
                                                                   ATTGATAACGATCGCGTTACGCTGACCAACCTGGGTGCCGACATCGCCCGCGGGACATTAACCGGAAACGCGCAGCGTAACGCCGACGGCAGCT                            >  SRR4302543.369256/1‑94 (MQ=60)
                                                                   ATTGATAACGATCGCGTTACGCTGACCAACCTGGGTGCCGACATCGCCCGCGGGACATTAACCGGAAACGCGCAGCGTAACGCCGACGGCAGCG                            >  SRR4302543.6469999/1‑94 (MQ=60)
                                                                    TTGATAACGATCGCGTTACGCTGACCAACCTGGGTGCCGACATCGCCCGCGGGACATTAACCGGAAACGCGCAGCGTAACGCCGACGGCAGCTG                           >  SRR4302543.4679066/1‑94 (MQ=60)
                                                                    TTGATAACGATCGCGTTACGCTGACCAACCTGGGTGCCGACATCGCCCGCGGGACATTAACCGGAAACGCGCAGCGTAACGCCGACGGCAGCTG                           <  SRR4302543.6143944/94‑1 (MQ=60)
                                                                     TGATAACGATCGCGTTACGCTGACCAACCTGGGTGCCGACATCGCCCGCGGGACATTAACCGGAAACGCGCAGCGTAACGCCGACGGCAGCTGG                          >  SRR4302543.2082138/1‑94 (MQ=60)
                                                                     TGATAACGATCGCGTTACGCTGACCAACCTGGGTGCCGACATCGCCCGCGGGACATTAACCGGAAACGCGCAGCGTAACGCCGACGGCAGCTGG                          >  SRR4302543.3628869/1‑94 (MQ=60)
                                                                       ATAACGATCGCGTTACGCTGACCAACCTGGGTGCCGACATCGCCCGCGGGACATTAACCGGAAACGCGCAGCGTAACGCCGACGGCAGCTGGCA                        <  SRR4302543.2879350/94‑1 (MQ=60)
                                                                       ATAACGATCGCGTTACGCTGACCAACCTGGGTGCCGACATCGCCCGCGGGACATTAACCGGAAACGCGCAGCGTAACGCCGACGGCAGCTGGCA                        >  SRR4302543.7309706/1‑94 (MQ=60)
                                                                         AACGATCGCGTTACGCTGACCAACCTGGGTGCCGACATCGCCCGCGGGACATTAACCGGAAACGCGCAGCGTAACGCCGACGGCAGCTGGCAAG                      <  SRR4302543.7446423/94‑1 (MQ=60)
                                                                         AACGATCGCGTTACGCTGACCAACCTGGGTGCCGACATCGCCCGCGGGACATTAACCGGAAACGCGCAGCGTAACGCCGACGGCAGCTGGCAAG                      >  SRR4302543.3981727/1‑94 (MQ=60)
                                                                         AACGATCGCGTTACGCTGACCAACCTGGGTGCCGACATCGCCCGCGGGACATTAACCGGAAACGCGCAGCGTAACGCCGACGGCAGCTGGCAAG                      <  SRR4302543.3379242/94‑1 (MQ=60)
                                                                          ACGATCGCGTTACGCTGACCAACCTGGGTGCCGACATCGCCCGCGGGACATTAACCGGAAACGCGCAGCGTAACGCCGACGGCAGCTGGCAAGT                     >  SRR4302543.1537827/1‑94 (MQ=60)
                                                                           CGATCGCGTTACGCTGACCAACCTGGGTGCCGACATCGCCCGCGGGACATTAACCGGAAACGCGCAGCGTAACGCCGACGGCAGCTGGCAAGTG                    >  SRR4302543.866302/1‑94 (MQ=60)
                                                                           CGATCGCGTTACGCTGACCAACCTGGGTGCCGACATCGCCCGCGGGACATTAACCGGAAACGCGCAGCGTAACGCCGACGGCAGCTGGCAAGTG                    <  SRR4302543.2521078/94‑1 (MQ=60)
                                                                           CGATCGCGTTACGCTGACCAACCTGGGTGCCGACATCGCCCGCGGGACATTAACCGGAAACGCGCAGCGTAACGCCGACGGCAGCTGGCAAGTG                    >  SRR4302543.3307715/1‑94 (MQ=60)
                                                                            GATCGCGTTACGCTGACCAACCTGGGTGCCGACATCGCCCGCGGGACATTAACCGGAAACGCGCAGCGTAACGCCGACGGCAGCTGGCAAGTGG                   >  SRR4302543.3307087/1‑94 (MQ=60)
                                                                             ATCGCGTTACGCTGACCAACCTGGGTGCCGACATCGCCCGCGGGACATTAACCGGAAACGCGCAGCGTAACGCCGACGGCAGCTGGCAAGTGGA                  >  SRR4302543.767001/1‑94 (MQ=60)
                                                                              TCGCGTTACGCTGACCAACCTGGGTGCCGACATCGCCCGCGGGACATTAACCGGAAACGCGCAGCGTAACGCCGACGGCAGCTGGCAAGTGGAA                 <  SRR4302543.4258142/94‑1 (MQ=60)
                                                                               CGCGTTACGCTGACCAACCTGGGTGCCGACATCGCCCGCGGGACATTAACCGGAAACGCGCAGCGTAACGCCGACGGCAGCTGGCAAGTGGAAA                <  SRR4302543.3160005/94‑1 (MQ=60)
                                                                               CGCGTTACGCTGACCAACCTGGGTGCCGACATCGCCCGCGGGACATTAACCGGAAACGCGCAGCGTAACGCCGACGGCAGCTGGCAAGTGGAAA                >  SRR4302543.1220099/1‑94 (MQ=60)
                                                                                GCGTTACGCTGACCAACCTGGGTGCCGACATCGCCCGCGGGACATTAACCGGAAACGCGCAGCGTAACGCCGACGGCAGCTGGCAAGTGGAAAA               <  SRR4302543.7257189/94‑1 (MQ=60)
                                                                                 CGTTACGCTGACCAACCTGGGTGCCGACATCGCCCGCGGGACATTAACCGGAAACGCGCAGCGTAACGCCGACGGCAGCTGGCAAGTGGAAAAC              >  SRR4302543.4675281/1‑94 (MQ=60)
                                                                                 CGTTACGCTGACCAACCTGGGTGCCGACATCGCCCGCGGGACATTAACCGGAAACGCGCAGCGTAACGCCGACGGCAGCTGGCAAGTGGAAAAC              >  SRR4302543.5517168/1‑94 (MQ=60)
                                                                                 CGTTACGCTGACCAACCTGGGTGCCGACATCGCCCGCGGGACATTAACCGGAAACGCGCAGCGTAACGCCGACGGCAGCTGGCAAGTGGAAAAC              <  SRR4302543.304649/94‑1 (MQ=60)
                                                                                 CGTTACGCTGACCAACCTGGGTGCCGACATCGCCCGCGGGACATTAACCGGAAACGCGCAGCGTAACGCCGACGGCAGCTGGCAAGTGGAAAAC              >  SRR4302543.5484155/1‑94 (MQ=60)
                                                                                  GTTACGCTGACCGACCTGGGTGCCGACATCGCCCGCGGGACATTAACCGGAAACGCGCAGCGTAACGCCGACGGCAGCTGGCAAGTGGAAAACC             >  SRR4302543.3853073/1‑94 (MQ=60)
                                                                                  GTTACGCTGACCAACCTGGGTGCCGACATCGCCCGCGGGACATTAACCGGAAACGCGCAGCGTAACGCCGACGGCAGCTGGCAAGTGGAAAACC             >  SRR4302543.190588/1‑94 (MQ=60)
                                                                                  GTTACGCTGACCAACCTGGGTGCCGACATCGCCCGCGGGACATTAACCGGAAACGCGCAGCGTAACGCCGACGGCAGCTGGCAAGTGGAAAACC             >  SRR4302543.190589/1‑94 (MQ=60)
                                                                                  GTTACGCTGACCAACCTGGGTGCCGACATCGCCCGCGGGACATTAACCGGAAACGCGCAGCGTAACGCCGACGGCAGCTGGCAAGTGGAAAACC             >  SRR4302543.4149609/1‑94 (MQ=60)
                                                                                  GTTACGCTGACCAACCTGGGTGCCGACATCGCCCGCGGGACATTAACCGGAAACGCGCAGCGTAACGCCGACGGCAGCTGGCAAGTGGAAAACC             >  SRR4302543.642467/1‑94 (MQ=60)
                                                                                   TTACGCTGACCAACCTGGGTGCCGACATCGCCCGCGGGACATTAACCGGAAACGCGCAGCGTAACGCCGACGGCAGCTGGCAAGTGGAAAACCT            >  SRR4302543.2850968/1‑94 (MQ=60)
                                                                                   TTACGCTGACCAACCTGGGTGCCGACATCGCCCGCGGGACATTAACCGGAAACGCGCAGCGTAACGCCGACGGCAGCTGGCAAGTGGAAAACCT            <  SRR4302543.6713418/94‑1 (MQ=60)
                                                                                   TTACGCTGACCAACCTGGGTGCCGACATCGCCCGCGGGACATTAACCGGAAACGCGCAGCGTAACGCCGACGGCAGCTGGCAAGTGGAAAACCT            <  SRR4302543.3241570/94‑1 (MQ=60)
                                                                                    TACGCTGACCAACCTGGGTGCCGACATCGCCCGCGGGACATTAACCGGAAACGCGCAGCGTAACGCCGACGGCAGCTGGCAAGTGGAAAACCTG           <  SRR4302543.5545258/94‑1 (MQ=60)
                                                                                     ACGCTGACCAACCTGGGTGCCGACATCGCCCGCGGGACATTAACCGGAAACGCGCAGCGTAACGCCGACGGCAGCTGGCAAGTGGAAAACCTGC          >  SRR4302543.5981215/1‑94 (MQ=60)
                                                                                     ACGCTGACCAACCTGGGTGCCGACATCGCCCGCGGGACATTAACCGGAAACGCGCAGCGTAACGCCGACGGCAGCTGGCAAGTGGAAAACCTGC          <  SRR4302543.2316779/94‑1 (MQ=60)
                                                                                      CGCTGACCAACCTGGGTGCCGACATCGCCCGCGGGACATTAACCGGAAACGCGCAGCGTAACGCCGACGGCAGCTGGCAAGTGGAAAACCTGCG         >  SRR4302543.482139/1‑94 (MQ=60)
                                                                                      CGCTGACCAACCTGGGTGCCGACATCGCCCGCGGGACATTAACCGGAAACGCGCAGCGTAACGCCGACGGCAGCTGGCAAGTGGAAAACCTGCG         <  SRR4302543.4843926/94‑1 (MQ=60)
                                                                                      CGCTGACCAACCTGGGTGCCGACATCGCCCGCGGGACATTAACCGGAAACGCGCAGCGTAACGCCGACGGCAGCTGGCAAGTGGAAAACCTGCG         >  SRR4302543.482140/1‑94 (MQ=60)
                                                                                      CGCTGACCAACCTGGGTGCCGACATCGCCCGCGGGACATTAACCGGAAACGCGCAGCGTAACGCCGACGGCAGCTGGCAAGTGGAAAACCTGCG         >  SRR4302543.1872270/1‑94 (MQ=60)
                                                                                      CGCTGACCAACCTGGGTGCCGACATCGCCCGCGGGACATTAACCGGAAACGCGCAGCGTAACGCCGACGGCAGCTGGCAAGTGGAAAACCTGCG         >  SRR4302543.4104114/1‑94 (MQ=60)
                                                                                      CGCTGACCAACCTGGGTGCCGACATCGCCCGCGGGACATTAACCGGAAACGCGCAGCGTAACGCCGACGGCAGCTGGCAAGTGGAAAACCTGCG         <  SRR4302543.367710/94‑1 (MQ=60)
                                                                                       GCTGACCAACCTGGGTGCCGACATCGCCCGCGGGACATTAACCGGAAACGCGCAGCGTAACGCCGACGGCAGCTGGCAAGTGGAAAACCTGCGC        >  SRR4302543.4975375/1‑94 (MQ=60)
                                                                                        CTGACCAACCTGGGTGCCGACATCGCCCGCGGGACATTAACCGGAAACGCGCAGCGTAACGCCGACGGCAGCTGGCAAGTGGAAAACCTGCGCA       >  SRR4302543.4801620/1‑94 (MQ=60)
                                                                                        CTGACCAACCTGGGTGCCGACATCGCCCGCGGGACATTAACCGGAAACGCGCAGCGTAACGCCGACGGCAGCTGGCAAGTGGAAAACCTGCGCA       >  SRR4302543.5770050/1‑94 (MQ=60)
                                                                                        CTGACCAACCTGGGTGCCGACATCGCCCGCGGGACATTAACCGGAAACGCGCAGCGTAACGCCGACGGCAGCTGGCAAGTGGAAAACCTGCGCA       >  SRR4302543.3430569/1‑94 (MQ=60)
                                                                                         TGACTAACCTGGGTGCCGACATCGCCCGCGGGACATTAACCGGAAACGCGCAGCGTAACGCCGACGGCAGCTGGCAAGTGGAAAACCTGCGCAT      >  SRR4302543.7619297/1‑94 (MQ=60)
                                                                                         TGACCAACCTGGGTGCCGACATCGCCCGCGGGACATTAACCGGAAACGCGCAGCGTAACGCCGACGGCAGCTGGCAAGTGGAAAACCTGCGCAT      >  SRR4302543.6109993/1‑94 (MQ=60)
                                                                                         TGACCAACCTGGGTGCCGACATCGCCCGCGGGACATTAACCGGAAACGCGCAGCGTAACGCCGACGGCAGCTGGCAAGTGGAAAACCTGCGCAT      <  SRR4302543.2354749/94‑1 (MQ=60)
                                                                                         TGACCAACCTGGGTGCCGACATCGCCCGCGGGACATTAACCGGAAACGCGCAGCGTAACGCCGACGGCAGCTGGCAAGTGGAAAACCTGCGCAT      <  SRR4302543.6228231/94‑1 (MQ=60)
                                                                                          GACCAACCTGGGTGCCGACATCGCCCGCGGGACATTAACCGGAAACGCGCAGCGTAACGCCGACGGCAGCTGGCAAGTGGAAAACCTGCGCATG     <  SRR4302543.2602718/94‑1 (MQ=60)
                                                                                          GACCAACCTGGGTGCCGACATCGCCCGCGGGACATTAACCGGAAACGCGCAGCGTAACGCCGACGGCAGCTGGCAAGTGGAAAACCTGCGCATG     <  SRR4302543.5837070/94‑1 (MQ=60)
                                                                                          GACCAACCTGGGTGCCGACATCGCCCGCGGGACATTAACCGGAAACGCGCAGCGTAACGCCGACGGCAGCTGGCAAGTGGAAAACCTGCGCATG     <  SRR4302543.1864507/94‑1 (MQ=60)
                                                                                          GACCAACCTGGGTGCCGACATCGCCCGCGGGACATTAACCGGAAACGCGCAGCGTAACGCCGACGGCAGCTGGCAAGTGGAAAAACTGCGCATG     >  SRR4302543.816956/1‑94 (MQ=60)
                                                                                           ACCAACCTGGGTGCCGACATCGCCCGCGGGACATTAACCGGAAACGCGCAGCGTAACGCCGACGGCAGCTGGCAAGTGGAAAACCTGCGCATGG    <  SRR4302543.1001829/94‑1 (MQ=60)
                                                                                           ACCAACCTGGGTGCCGACATCGCCCGCGGGACATTAACCGGAAACGCGCAGCGTAACGCCGACGGCAGCTGGCAAGTGGAAAACCTGCGCATGG    <  SRR4302543.7898878/94‑1 (MQ=60)
                                                                                           ACCAACCTGGGTGCCGACATCGCCCGCGGGACATTAACCGGAAACGCGCAGCGTAACGCCGACGGCAGCTGGCAAGTGGAAAACCTGCGCATGG    >  SRR4302543.4853342/1‑94 (MQ=60)
                                                                                           ACCAACCTGGGTGCCGACATCGCCCGCGGGACATTAACCGGAAACGCGCAGCGTAACGCCGACGGCAGCTGGCAAGTGGAAAACCTGCGCATGG    <  SRR4302543.5141168/94‑1 (MQ=60)
                                                                                           ACCAACCTGGGTGCCGACATCGCCCGCGGGACATTAACCGGAAACGCGCAGCGTAACGCCGACGGCAGCTGGCAAGTGGAAAACCTGCGCATGG    <  SRR4302543.5649014/94‑1 (MQ=60)
                                                                                             CAACCTGGGTGCCGACATCGCCCGCGGGACATTAACCGGAAACGCGCAGCGTAACGCCGACGGCAGCTGGCAAGTGGAAAACCTGCGCATGGCG  <  SRR4302543.7988993/94‑1 (MQ=60)
                                                                                             CAACCTGGGTGCCGACATCGCCCGCGGGACATTAACCGGAAACGCGCAGCGTAACGCCGACGGCAGCTGGCAAGTGGAAAACCTGCGCATGGCG  >  SRR4302543.2816309/1‑94 (MQ=60)
                                                                                             CAACCTGGGTGCCGACATCGCCCGCGGGACATTAACCGGAAACGCGCAGCGTAACGCCGACGGCAGCTGGCAAGTGGAAAACCTGCGCATGGCG  <  SRR4302543.2984744/94‑1 (MQ=60)
                                                                                             CAACCTGGGTGCCGACATCGCCCGCGGGACATTAACCGGAAACGCGCAGCGTAACGCCGACGGCAGCTGGCAAGTGGAAAACCTGCGCATGGCG  <  SRR4302543.4364623/94‑1 (MQ=60)
                                                                                             CAACCTGGGTGCCGACATCGCCCGCGGGACATTAACCGGAAACGCGCAGCGTAACGCCGACGGCAGCTGGCAAGTGGAAAACCTGCGCATGGCG  <  SRR4302543.4407778/94‑1 (MQ=60)
                                                                                             |                                                                                             
TCAGTTTAGTGCCGGATCGCTTTCGCTCAATGATGTTCCTGCCACCAATGTACTGATTGAAGGCAGTATTGATAACGATCGCGTTACGCTGACTAACCTGGGTGCCGACATCGCCCGCGGGACATTAACCGGAAACGCGCAGCGTAACGCCGACGGCAGCTGGCAAGTGGAAAACCTGCGCATGGCG  >  NC_000913/3828581‑3828767

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: